View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12953_low_23 (Length: 269)
Name: NF12953_low_23
Description: NF12953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12953_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 6586301 - 6586555
Alignment:
| Q |
1 |
gtaccaaaactccaagctgccatcacattttcaaaattcaattcaacataaagtttccattcaaatattaattaagtcgaattgaaaatatgaagtttgt |
100 |
Q |
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| T |
6586301 |
gtaccaaaactccaagctgccatcacattttcaaaattcaattcaacataaagtttccattcaaatattaattaagtcgaattgaaaatatgaagtttgt |
6586400 |
T |
|
| Q |
101 |
gaaaatataccataacataacagctgaagctaaagaaagtttcaaaaaattaaacaaatctgcaaaagctagccatgagaatccactccaagcaccatct |
200 |
Q |
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| T |
6586401 |
gaaaatataccataacataacagctgaagctaaagaaagtttcaaaaaattaaacaaatctgcaaaagctagccatgagaatccactccaagcaccatct |
6586500 |
T |
|
| Q |
201 |
gatttggtgatgaaaatgtacaaaagttgaccaatgacaatcaaccaccatgatg |
255 |
Q |
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| T |
6586501 |
gatttggtgatgaaaatgtacaaaagttgaccaatgacaatcaaccaccatgatg |
6586555 |
T |
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