View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12953_low_26 (Length: 259)
Name: NF12953_low_26
Description: NF12953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12953_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 20670617 - 20670867
Alignment:
| Q |
1 |
taaacaaatgggtaagcatcttatcaatctcacatccatcacttagcctaacactcttcatccctcaacaacccttaccatcttcctctacattaaaccc |
100 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
20670617 |
taaacaaatgggtaagcatcttatcaatctcccatccatcacttagcctaacactcttcattcctcaacaacccttaccatcttcctctacattaaaccc |
20670716 |
T |
|
| Q |
101 |
cttcacttttccatatcatatcatccctcaacgtctcgtctacactgacctcctcctcctccctcgttactctcgtatacctactcttctccccggtaaa |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
20670717 |
cttcacttttccatatcatatcatccctcaacgtctcgtctacgctgacctcctcctcctccctcgttactctcgtatccctactcttctccccggtaaa |
20670816 |
T |
|
| Q |
201 |
accatcaccgttaccgataacttccccggtaatttcacccttgatgatgtc |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20670817 |
accatcaccgttaccgataacttccccggtaatttcacccttgatgatgtc |
20670867 |
T |
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