View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12958_low_2 (Length: 524)

Name: NF12958_low_2
Description: NF12958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12958_low_2
NF12958_low_2
[»] chr8 (66 HSPs)
chr8 (5-418)||(29446743-29447163)
chr8 (305-418)||(36450695-36450807)
chr8 (307-415)||(40332200-40332307)
chr8 (306-417)||(3025558-3025668)
chr8 (308-417)||(5813599-5813707)
chr8 (305-418)||(14134705-14134817)
chr8 (305-416)||(31557005-31557114)
chr8 (305-416)||(33405325-33405435)
chr8 (358-418)||(4948658-4948718)
chr8 (305-417)||(18407726-18407837)
chr8 (306-417)||(926730-926840)
chr8 (306-417)||(20679337-20679447)
chr8 (350-416)||(20873077-20873143)
chr8 (300-417)||(37283751-37283862)
chr8 (358-417)||(31236570-31236629)
chr8 (305-376)||(34450962-34451032)
chr8 (305-417)||(22651983-22652105)
chr8 (304-405)||(43737751-43737851)
chr8 (365-417)||(25566848-25566900)
chr8 (350-418)||(26434186-26434254)
chr8 (305-377)||(29510234-29510305)
chr8 (305-416)||(41831876-41831991)
chr8 (350-417)||(22596001-22596068)
chr8 (366-416)||(4298887-4298937)
chr8 (359-417)||(24613528-24613585)
chr8 (351-416)||(4786324-4786389)
chr8 (360-417)||(13844591-13844648)
chr8 (354-418)||(31514878-31514943)
chr8 (360-417)||(34897092-34897149)
chr8 (365-417)||(2572056-2572108)
chr8 (365-417)||(8342979-8343031)
chr8 (361-417)||(12606825-12606881)
chr8 (360-416)||(12985400-12985456)
chr8 (365-417)||(28745505-28745557)
chr8 (305-376)||(3951477-3951547)
chr8 (361-412)||(18170478-18170529)
chr8 (361-412)||(18634046-18634097)
chr8 (365-416)||(24669441-24669492)
chr8 (359-417)||(8343323-8343381)
chr8 (363-417)||(30077385-30077439)
chr8 (365-418)||(15816129-15816182)
chr8 (365-417)||(13436964-13437016)
chr8 (365-417)||(21465419-21465471)
chr8 (350-410)||(42874536-42874596)
chr8 (365-416)||(11927086-11927137)
chr8 (305-376)||(15816059-15816129)
chr8 (480-511)||(29447225-29447256)
chr8 (350-396)||(15023242-15023288)
chr8 (305-339)||(31514938-31514972)
chr8 (360-413)||(1433356-1433409)
chr8 (383-416)||(3508060-3508093)
chr8 (305-342)||(9383047-9383084)
chr8 (383-416)||(14227230-14227263)
chr8 (305-370)||(16641910-16641974)
chr8 (305-370)||(26902105-26902169)
chr8 (383-416)||(29198497-29198530)
chr8 (355-416)||(31580117-31580178)
chr8 (383-416)||(34201064-34201097)
chr8 (383-416)||(37225761-37225794)
chr8 (306-343)||(44067607-44067644)
chr8 (360-416)||(6501503-6501559)
chr8 (350-402)||(9414860-9414912)
chr8 (389-417)||(18067958-18067986)
chr8 (305-404)||(24858032-24858134)
chr8 (360-416)||(34259790-34259846)
chr8 (373-417)||(41838131-41838175)
[»] chr6 (85 HSPs)
chr6 (305-418)||(34595140-34595252)
chr6 (305-417)||(28152106-28152216)
chr6 (305-417)||(28715302-28715413)
chr6 (305-417)||(17841530-17841641)
chr6 (305-417)||(4877949-4878060)
chr6 (302-418)||(31384926-31385051)
chr6 (307-417)||(32978842-32978952)
chr6 (305-417)||(9658886-9658998)
chr6 (305-418)||(16833314-16833426)
chr6 (348-416)||(403847-403915)
chr6 (305-417)||(7377986-7378097)
chr6 (349-417)||(33001273-33001341)
chr6 (305-418)||(8776909-8777026)
chr6 (305-410)||(17327591-17327700)
chr6 (359-416)||(426508-426565)
chr6 (305-417)||(24645487-24645599)
chr6 (306-417)||(12696331-12696446)
chr6 (305-417)||(32511607-32511718)
chr6 (306-417)||(7265535-7265645)
chr6 (355-417)||(19040359-19040421)
chr6 (360-417)||(7977825-7977882)
chr6 (365-418)||(10770674-10770727)
chr6 (305-414)||(13364646-13364754)
chr6 (349-417)||(30851609-30851675)
chr6 (350-418)||(853844-853912)
chr6 (365-417)||(16766704-16766756)
chr6 (365-416)||(9617442-9617493)
chr6 (364-415)||(9629392-9629443)
chr6 (350-416)||(31579212-31579276)
chr6 (364-418)||(7801155-7801209)
chr6 (361-410)||(6751878-6751927)
chr6 (307-417)||(7996325-7996430)
chr6 (307-417)||(8022371-8022476)
chr6 (305-417)||(6898222-6898333)
chr6 (365-417)||(9025494-9025546)
chr6 (365-417)||(9107370-9107422)
chr6 (366-418)||(15489733-15489785)
chr6 (350-417)||(1191685-1191752)
chr6 (305-376)||(8365449-8365519)
chr6 (305-376)||(10339055-10339125)
chr6 (305-376)||(16766756-16766826)
chr6 (305-376)||(18367895-18367965)
chr6 (370-417)||(30866149-30866196)
chr6 (367-417)||(9522898-9522948)
chr6 (303-417)||(31959166-31959270)
chr6 (380-417)||(43723-43760)
chr6 (359-416)||(5732504-5732561)
chr6 (365-418)||(8365519-8365572)
chr6 (305-418)||(13360314-13360425)
chr6 (365-410)||(19369831-19369876)
chr6 (360-417)||(21924930-21924987)
chr6 (367-416)||(32299283-32299332)
chr6 (380-416)||(2140496-2140532)
chr6 (365-417)||(20371110-20371162)
chr6 (365-417)||(21395308-21395359)
chr6 (371-418)||(1681764-1681811)
chr6 (373-416)||(4118341-4118384)
chr6 (365-416)||(5970108-5970159)
chr6 (305-376)||(7490081-7490152)
chr6 (305-340)||(10649371-10649406)
chr6 (305-376)||(16488520-16488590)
chr6 (372-418)||(17302562-17302609)
chr6 (360-414)||(1700362-1700416)
chr6 (371-417)||(2117083-2117129)
chr6 (367-417)||(7086802-7086852)
chr6 (353-415)||(7740650-7740712)
chr6 (365-403)||(9911528-9911566)
chr6 (354-396)||(16388206-16388248)
chr6 (358-404)||(26402673-26402719)
chr6 (383-416)||(5462694-5462727)
chr6 (305-338)||(7723200-7723233)
chr6 (360-417)||(7938123-7938180)
chr6 (302-343)||(17341619-17341660)
chr6 (383-416)||(29049893-29049926)
chr6 (367-416)||(29711270-29711319)
chr6 (365-417)||(9027185-9027237)
chr6 (365-417)||(9195754-9195806)
chr6 (369-413)||(10157995-10158039)
chr6 (365-417)||(10294114-10294166)
chr6 (380-416)||(17168902-17168938)
chr6 (372-416)||(17341671-17341715)
chr6 (366-418)||(19044470-19044522)
chr6 (361-417)||(20370476-20370532)
chr6 (365-417)||(26562696-26562748)
chr6 (365-417)||(34073347-34073399)
[»] chr5 (70 HSPs)
chr5 (306-417)||(21190998-21191108)
chr5 (305-417)||(21576686-21576797)
chr5 (305-416)||(28588615-28588725)
chr5 (305-417)||(27932242-27932353)
chr5 (305-417)||(42893367-42893478)
chr5 (305-417)||(31084330-31084446)
chr5 (305-414)||(43564891-43564999)
chr5 (306-417)||(43001807-43001922)
chr5 (354-417)||(6247629-6247692)
chr5 (306-417)||(30502330-30502440)
chr5 (306-417)||(30542673-30542783)
chr5 (317-415)||(26312778-26312875)
chr5 (362-417)||(8420034-8420089)
chr5 (365-416)||(13287399-13287450)
chr5 (355-404)||(15884008-15884057)
chr5 (305-406)||(42029770-42029870)
chr5 (309-413)||(21194068-21194171)
chr5 (349-417)||(23012392-23012460)
chr5 (305-416)||(30098334-30098455)
chr5 (350-416)||(32630720-32630786)
chr5 (360-418)||(33178031-33178089)
chr5 (308-418)||(4105263-4105374)
chr5 (365-418)||(5894833-5894886)
chr5 (365-418)||(10298575-10298628)
chr5 (305-417)||(39698548-39698670)
chr5 (304-376)||(6401557-6401628)
chr5 (380-416)||(9449477-9449513)
chr5 (350-414)||(18421826-18421890)
chr5 (365-417)||(19579708-19579760)
chr5 (304-376)||(21542089-21542160)
chr5 (356-416)||(24906292-24906352)
chr5 (305-376)||(21522809-21522879)
chr5 (305-376)||(21533375-21533445)
chr5 (306-341)||(41995546-41995581)
chr5 (305-414)||(14873527-14873640)
chr5 (372-418)||(15405062-15405108)
chr5 (355-417)||(16203785-16203847)
chr5 (308-402)||(30098982-30099075)
chr5 (360-413)||(6326292-6326345)
chr5 (365-418)||(22423812-22423865)
chr5 (307-376)||(39268541-39268609)
chr5 (360-416)||(2548395-2548451)
chr5 (365-417)||(3966510-3966562)
chr5 (365-417)||(6471889-6471941)
chr5 (365-417)||(7677712-7677764)
chr5 (305-417)||(17123055-17123165)
chr5 (360-416)||(17925167-17925223)
chr5 (366-418)||(21351906-21351958)
chr5 (305-340)||(10298633-10298668)
chr5 (370-417)||(14674276-14674323)
chr5 (354-417)||(17177012-17177075)
chr5 (305-376)||(21814320-21814390)
chr5 (305-340)||(22423765-22423800)
chr5 (305-376)||(32766873-32766943)
chr5 (305-340)||(35017126-35017161)
chr5 (305-340)||(39695952-39695987)
chr5 (383-416)||(11596473-11596506)
chr5 (307-376)||(18592132-18592200)
chr5 (383-416)||(18607115-18607148)
chr5 (365-418)||(21542036-21542089)
chr5 (366-418)||(30135319-30135372)
chr5 (369-417)||(7218271-7218319)
chr5 (316-376)||(15382533-15382592)
chr5 (365-417)||(21522757-21522809)
chr5 (365-417)||(21533323-21533375)
chr5 (305-341)||(24906253-24906289)
chr5 (384-416)||(28296336-28296368)
chr5 (365-417)||(36838550-36838602)
chr5 (365-417)||(41091257-41091309)
chr5 (365-417)||(41633742-41633794)
[»] chr7 (83 HSPs)
chr7 (305-417)||(21880159-21880270)
chr7 (305-417)||(5409772-5409888)
chr7 (305-417)||(598215-598326)
chr7 (305-417)||(43027405-43027521)
chr7 (305-417)||(32287404-32287515)
chr7 (305-414)||(9778510-9778623)
chr7 (305-417)||(15680816-15680927)
chr7 (305-417)||(20549798-20549909)
chr7 (305-404)||(21864828-21864926)
chr7 (358-417)||(25481909-25481968)
chr7 (366-416)||(7438714-7438764)
chr7 (305-417)||(24339649-24339771)
chr7 (365-418)||(27945047-27945100)
chr7 (360-417)||(28155577-28155634)
chr7 (350-418)||(8234152-8234220)
chr7 (357-417)||(19213810-19213870)
chr7 (305-418)||(32093955-32094074)
chr7 (350-417)||(7197282-7197349)
chr7 (356-417)||(1401032-1401093)
chr7 (365-418)||(3991330-3991383)
chr7 (309-417)||(13770698-13770810)
chr7 (305-406)||(18212974-18213074)
chr7 (305-418)||(33994218-33994330)
chr7 (305-416)||(1433462-1433577)
chr7 (365-417)||(19992008-19992060)
chr7 (305-417)||(24105685-24105796)
chr7 (369-417)||(26033465-26033513)
chr7 (357-417)||(26733311-26733371)
chr7 (365-416)||(9408334-9408385)
chr7 (355-414)||(9482944-9483003)
chr7 (358-405)||(25956464-25956511)
chr7 (359-417)||(3721100-3721158)
chr7 (359-417)||(11061070-11061128)
chr7 (315-416)||(12278843-12278943)
chr7 (305-363)||(29763130-29763187)
chr7 (349-418)||(5835253-5835322)
chr7 (365-418)||(35861970-35862023)
chr7 (358-410)||(5937414-5937466)
chr7 (365-416)||(18039006-18039058)
chr7 (365-417)||(18215186-18215238)
chr7 (361-417)||(24146823-24146879)
chr7 (305-341)||(35862033-35862069)
chr7 (366-410)||(48438560-48438604)
chr7 (355-414)||(3554496-3554555)
chr7 (366-417)||(19206057-19206108)
chr7 (365-404)||(21560523-21560562)
chr7 (350-417)||(23191903-23191969)
chr7 (383-417)||(2424621-2424655)
chr7 (365-415)||(12843175-12843225)
chr7 (365-411)||(22602710-22602756)
chr7 (315-417)||(27093364-27093465)
chr7 (315-417)||(27184836-27184937)
chr7 (305-343)||(28155634-28155672)
chr7 (383-417)||(29787387-29787421)
chr7 (383-417)||(32308127-32308161)
chr7 (351-417)||(42720876-42720942)
chr7 (365-410)||(1885587-1885632)
chr7 (365-418)||(7058432-7058485)
chr7 (307-340)||(8842282-8842315)
chr7 (383-416)||(11700811-11700844)
chr7 (305-338)||(30813882-30813915)
chr7 (383-416)||(38134424-38134457)
chr7 (349-406)||(39138462-39138519)
chr7 (383-416)||(44172908-44172941)
chr7 (368-416)||(2425736-2425784)
chr7 (368-416)||(3520345-3520393)
chr7 (360-416)||(4909159-4909215)
chr7 (305-341)||(5307338-5307374)
chr7 (300-340)||(6490799-6490839)
chr7 (365-417)||(7328691-7328743)
chr7 (305-341)||(7438799-7438835)
chr7 (365-414)||(11272586-11272637)
chr7 (366-418)||(11665441-11665493)
chr7 (389-417)||(12289121-12289149)
chr7 (366-418)||(13300416-13300468)
chr7 (313-417)||(14077383-14077486)
chr7 (313-417)||(14387411-14387514)
chr7 (305-373)||(25822717-25822784)
chr7 (383-415)||(30731046-30731078)
chr7 (373-417)||(30813819-30813863)
chr7 (360-416)||(38143231-38143287)
chr7 (381-413)||(41360921-41360953)
chr7 (389-417)||(45056925-45056953)
[»] chr4 (74 HSPs)
chr4 (305-417)||(23292927-23293038)
chr4 (305-418)||(24613631-24613754)
chr4 (305-417)||(28964189-28964300)
chr4 (303-417)||(3947700-3947818)
chr4 (305-417)||(8423659-8423770)
chr4 (350-418)||(54580008-54580076)
chr4 (305-416)||(16073403-16073512)
chr4 (308-418)||(12797282-12797390)
chr4 (309-417)||(49431032-49431140)
chr4 (305-417)||(2361916-2362027)
chr4 (305-416)||(12895215-12895325)
chr4 (350-417)||(29205451-29205518)
chr4 (316-417)||(21945510-21945610)
chr4 (305-418)||(34306745-34306856)
chr4 (350-410)||(13307891-13307951)
chr4 (305-404)||(42640549-42640642)
chr4 (305-404)||(715546-715646)
chr4 (305-404)||(752872-752972)
chr4 (305-418)||(35157926-35158038)
chr4 (350-418)||(4157156-4157223)
chr4 (365-417)||(12895116-12895168)
chr4 (305-376)||(30982808-30982878)
chr4 (305-418)||(36635330-36635448)
chr4 (350-417)||(38846997-38847064)
chr4 (326-416)||(40179598-40179687)
chr4 (305-406)||(35161054-35161154)
chr4 (365-417)||(11596352-11596404)
chr4 (366-417)||(847958-848009)
chr4 (305-376)||(5414102-5414172)
chr4 (307-404)||(28084542-28084640)
chr4 (350-404)||(4157456-4157510)
chr4 (367-416)||(6485613-6485662)
chr4 (359-404)||(6879459-6879504)
chr4 (383-416)||(12077836-12077869)
chr4 (305-416)||(18513176-18513292)
chr4 (360-417)||(33950143-33950200)
chr4 (350-418)||(40481643-40481715)
chr4 (353-410)||(44362680-44362737)
chr4 (305-417)||(4672026-4672137)
chr4 (366-418)||(7214523-7214575)
chr4 (304-376)||(30838269-30838340)
chr4 (383-414)||(2234260-2234291)
chr4 (305-340)||(4383449-4383484)
chr4 (305-340)||(5775305-5775340)
chr4 (360-407)||(13117446-13117493)
chr4 (378-417)||(14465088-14465127)
chr4 (305-376)||(22234820-22234890)
chr4 (306-341)||(22440559-22440594)
chr4 (305-417)||(23861370-23861483)
chr4 (367-410)||(37496718-37496761)
chr4 (305-339)||(3064869-3064903)
chr4 (366-416)||(5775359-5775409)
chr4 (305-415)||(30103298-30103406)
chr4 (387-417)||(34200293-34200323)
chr4 (383-416)||(903930-903963)
chr4 (365-418)||(4383374-4383426)
chr4 (383-416)||(5654609-5654642)
chr4 (350-415)||(9996849-9996914)
chr4 (383-416)||(10546156-10546189)
chr4 (360-417)||(16189716-16189773)
chr4 (383-416)||(19230327-19230360)
chr4 (365-418)||(19482674-19482727)
chr4 (383-416)||(22440618-22440651)
chr4 (365-417)||(30298953-30299006)
chr4 (365-417)||(30327821-30327874)
chr4 (380-417)||(30522930-30522967)
chr4 (356-417)||(31800469-31800530)
chr4 (365-417)||(35723384-35723437)
chr4 (383-416)||(43299989-43300022)
chr4 (383-416)||(43300624-43300657)
chr4 (378-415)||(44796975-44797012)
chr4 (373-417)||(11651142-11651186)
chr4 (305-341)||(17425348-17425384)
chr4 (375-415)||(18844483-18844523)
[»] chr3 (75 HSPs)
chr3 (305-418)||(55401081-55401193)
chr3 (305-415)||(20503474-20503583)
chr3 (305-418)||(10954958-10955073)
chr3 (306-417)||(28918008-28918120)
chr3 (305-406)||(35222956-35223056)
chr3 (305-418)||(15999951-16000069)
chr3 (306-416)||(25775516-25775624)
chr3 (305-417)||(26492146-26492257)
chr3 (305-404)||(40993276-40993374)
chr3 (305-414)||(8789489-8789599)
chr3 (306-416)||(24204983-24205092)
chr3 (305-417)||(27505253-27505369)
chr3 (360-417)||(51206348-51206405)
chr3 (359-417)||(8383264-8383322)
chr3 (305-417)||(11251985-11252094)
chr3 (305-406)||(13845466-13845566)
chr3 (306-417)||(4987222-4987343)
chr3 (317-413)||(7171513-7171607)
chr3 (365-417)||(49651786-49651838)
chr3 (359-417)||(7928457-7928515)
chr3 (311-400)||(3631708-3631796)
chr3 (305-418)||(18426955-18427067)
chr3 (368-417)||(26508117-26508166)
chr3 (365-418)||(34910323-34910376)
chr3 (365-417)||(1509546-1509598)
chr3 (353-416)||(5339116-5339184)
chr3 (361-413)||(8587017-8587069)
chr3 (354-418)||(10335275-10335339)
chr3 (365-417)||(14832106-14832158)
chr3 (349-416)||(24633385-24633452)
chr3 (305-376)||(41961580-41961650)
chr3 (350-417)||(45451560-45451627)
chr3 (350-400)||(3865698-3865748)
chr3 (383-417)||(9624648-9624682)
chr3 (350-416)||(25093510-25093576)
chr3 (359-417)||(35994733-35994789)
chr3 (359-417)||(49505148-49505206)
chr3 (349-406)||(2941576-2941633)
chr3 (365-418)||(14209119-14209172)
chr3 (353-410)||(14338471-14338528)
chr3 (364-417)||(21479125-21479178)
chr3 (365-418)||(28812521-28812574)
chr3 (305-417)||(34185053-34185175)
chr3 (353-417)||(34307763-34307832)
chr3 (303-343)||(1389918-1389958)
chr3 (365-417)||(4990967-4991019)
chr3 (360-416)||(10268481-10268537)
chr3 (365-417)||(14829697-14829748)
chr3 (369-417)||(21256990-21257038)
chr3 (365-417)||(25948887-25948939)
chr3 (305-340)||(4990913-4990948)
chr3 (361-404)||(8593157-8593200)
chr3 (365-416)||(15796294-15796345)
chr3 (367-418)||(17005621-17005672)
chr3 (373-416)||(17568691-17568734)
chr3 (365-416)||(39756244-39756295)
chr3 (350-412)||(6780404-6780466)
chr3 (305-339)||(8842413-8842447)
chr3 (383-413)||(12704056-12704086)
chr3 (360-406)||(13414487-13414533)
chr3 (365-418)||(750618-750671)
chr3 (365-410)||(17052378-17052423)
chr3 (365-418)||(41961650-41961703)
chr3 (383-416)||(46191363-46191396)
chr3 (383-416)||(52369783-52369816)
chr3 (373-417)||(3164033-3164077)
chr3 (304-416)||(7614356-7614466)
chr3 (365-417)||(8039835-8039887)
chr3 (365-417)||(9800047-9800099)
chr3 (305-349)||(14979223-14979267)
chr3 (305-416)||(15864841-15864950)
chr3 (360-416)||(20691327-20691383)
chr3 (390-418)||(24633772-24633800)
chr3 (360-416)||(27858348-27858404)
chr3 (364-416)||(40697857-40697909)
[»] chr1 (92 HSPs)
chr1 (305-417)||(38078602-38078713)
chr1 (304-416)||(40258873-40258984)
chr1 (305-417)||(22515828-22515939)
chr1 (306-417)||(42359391-42359501)
chr1 (305-415)||(18337338-18337447)
chr1 (305-418)||(37598838-37598949)
chr1 (305-417)||(46348324-46348435)
chr1 (305-417)||(51410031-51410143)
chr1 (306-417)||(1486646-1486761)
chr1 (318-417)||(40181878-40181976)
chr1 (305-418)||(32461394-32461516)
chr1 (305-404)||(1815277-1815375)
chr1 (355-418)||(22881606-22881669)
chr1 (305-417)||(36878468-36878584)
chr1 (305-417)||(31015050-31015155)
chr1 (309-417)||(5898211-5898318)
chr1 (317-417)||(18190061-18190160)
chr1 (306-405)||(29163323-29163421)
chr1 (305-376)||(47989556-47989626)
chr1 (306-415)||(16297223-16297333)
chr1 (359-417)||(41877464-41877522)
chr1 (305-418)||(7918155-7918264)
chr1 (365-418)||(24577186-24577239)
chr1 (305-417)||(2896062-2896173)
chr1 (305-376)||(25934675-25934745)
chr1 (305-376)||(40917808-40917878)
chr1 (359-417)||(9709827-9709885)
chr1 (359-417)||(31672889-31672947)
chr1 (359-416)||(1864874-1864931)
chr1 (356-417)||(5927331-5927392)
chr1 (305-406)||(10577676-10577776)
chr1 (357-418)||(14332634-14332695)
chr1 (305-406)||(30749858-30749958)
chr1 (305-406)||(30771309-30771409)
chr1 (365-417)||(113306-113358)
chr1 (365-417)||(1704992-1705044)
chr1 (365-417)||(6427357-6427409)
chr1 (305-404)||(6427484-6427593)
chr1 (365-416)||(6612171-6612222)
chr1 (305-376)||(9828103-9828173)
chr1 (309-404)||(26830608-26830701)
chr1 (359-417)||(19058850-19058908)
chr1 (350-416)||(21530697-21530763)
chr1 (360-416)||(2288164-2288218)
chr1 (365-418)||(6332677-6332729)
chr1 (305-402)||(12918967-12919063)
chr1 (365-414)||(44482240-44482289)
chr1 (305-342)||(48415667-48415704)
chr1 (365-417)||(5376500-5376552)
chr1 (360-416)||(9103648-9103703)
chr1 (366-418)||(28273089-28273141)
chr1 (367-418)||(10572591-10572642)
chr1 (305-340)||(22947813-22947848)
chr1 (354-397)||(24334694-24334737)
chr1 (365-412)||(25272494-25272541)
chr1 (366-417)||(27471567-27471618)
chr1 (365-404)||(28663628-28663667)
chr1 (367-418)||(32434718-32434769)
chr1 (383-418)||(34298442-34298477)
chr1 (305-340)||(35702543-35702578)
chr1 (387-417)||(1262891-1262921)
chr1 (328-418)||(8842678-8842767)
chr1 (383-417)||(12443478-12443512)
chr1 (359-417)||(13436465-13436523)
chr1 (358-416)||(19637776-19637834)
chr1 (305-339)||(21365993-21366027)
chr1 (367-417)||(21378585-21378635)
chr1 (371-417)||(22947746-22947792)
chr1 (362-416)||(31667433-31667487)
chr1 (365-414)||(2283676-2283725)
chr1 (383-416)||(3921675-3921708)
chr1 (365-418)||(9828050-9828103)
chr1 (299-340)||(10572529-10572570)
chr1 (383-416)||(11571593-11571626)
chr1 (383-416)||(17425111-17425144)
chr1 (359-404)||(21620975-21621020)
chr1 (365-414)||(25361896-25361945)
chr1 (305-417)||(27965941-27966050)
chr1 (361-398)||(39410668-39410705)
chr1 (360-417)||(39953141-39953198)
chr1 (383-416)||(40747791-40747824)
chr1 (305-342)||(48450551-48450588)
chr1 (359-416)||(52903257-52903314)
chr1 (305-341)||(2218310-2218346)
chr1 (360-416)||(7988446-7988502)
chr1 (365-417)||(9629900-9629952)
chr1 (305-341)||(9630562-9630598)
chr1 (365-417)||(18556456-18556508)
chr1 (365-417)||(20157350-20157402)
chr1 (365-409)||(34371728-34371772)
chr1 (361-417)||(38075966-38076022)
chr1 (352-416)||(39130754-39130818)
[»] chr2 (76 HSPs)
chr2 (306-417)||(2438661-2438771)
chr2 (305-417)||(37558984-37559095)
chr2 (305-418)||(18840954-18841066)
chr2 (312-404)||(5040754-5040845)
chr2 (305-417)||(38117100-38117211)
chr2 (305-416)||(15972881-15972991)
chr2 (305-406)||(20242668-20242768)
chr2 (327-416)||(30404813-30404901)
chr2 (326-418)||(5367198-5367289)
chr2 (305-401)||(28596492-28596587)
chr2 (350-410)||(43585990-43586050)
chr2 (317-404)||(12224243-12224329)
chr2 (305-376)||(24009343-24009413)
chr2 (359-418)||(19536391-19536451)
chr2 (305-376)||(37419802-37419872)
chr2 (367-417)||(18420436-18420486)
chr2 (305-375)||(26769571-26769640)
chr2 (359-416)||(18255974-18256031)
chr2 (306-375)||(19942314-19942382)
chr2 (305-417)||(30717460-30717582)
chr2 (308-417)||(37411188-37411296)
chr2 (367-416)||(44605141-44605190)
chr2 (305-371)||(11223794-11223858)
chr2 (307-417)||(21091730-21091839)
chr2 (359-417)||(34691799-34691857)
chr2 (359-417)||(34714211-34714269)
chr2 (366-416)||(35732418-35732468)
chr2 (365-418)||(974753-974806)
chr2 (365-418)||(12668423-12668476)
chr2 (365-418)||(15657870-15657923)
chr2 (327-416)||(18570980-18571068)
chr2 (305-398)||(34993923-34994015)
chr2 (360-416)||(18421971-18422027)
chr2 (365-417)||(20539674-20539726)
chr2 (350-410)||(24067764-24067824)
chr2 (380-416)||(30563417-30563453)
chr2 (365-417)||(44860327-44860379)
chr2 (350-417)||(6940262-6940329)
chr2 (305-348)||(10535686-10535729)
chr2 (366-417)||(11223864-11223915)
chr2 (367-410)||(14450797-14450840)
chr2 (305-340)||(18255945-18255980)
chr2 (359-418)||(20473328-20473387)
chr2 (355-417)||(31284055-31284118)
chr2 (305-376)||(36096305-36096375)
chr2 (366-417)||(42832277-42832328)
chr2 (351-417)||(18276528-18276594)
chr2 (383-417)||(21616769-21616803)
chr2 (359-397)||(21624294-21624332)
chr2 (383-417)||(21782836-21782870)
chr2 (363-417)||(23718033-23718087)
chr2 (363-417)||(24105705-24105759)
chr2 (359-417)||(31018597-31018655)
chr2 (360-417)||(896218-896275)
chr2 (383-416)||(4332934-4332967)
chr2 (383-416)||(19613631-19613664)
chr2 (372-417)||(21374706-21374751)
chr2 (384-417)||(27084269-27084302)
chr2 (365-418)||(30335423-30335476)
chr2 (303-340)||(34691768-34691805)
chr2 (303-340)||(34714180-34714217)
chr2 (365-418)||(36756344-36756397)
chr2 (365-418)||(38442313-38442366)
chr2 (372-417)||(39323271-39323316)
chr2 (383-416)||(40681990-40682023)
chr2 (305-370)||(42511323-42511387)
chr2 (306-347)||(42832234-42832275)
chr2 (384-416)||(2331802-2331834)
chr2 (305-376)||(22084757-22084830)
chr2 (365-416)||(23058442-23058494)
chr2 (360-416)||(23921261-23921317)
chr2 (369-417)||(30471045-30471093)
chr2 (365-417)||(33153431-33153483)
chr2 (360-408)||(33884067-33884115)
chr2 (306-338)||(36756275-36756307)
chr2 (348-416)||(40361737-40361805)
[»] scaffold0652 (1 HSPs)
scaffold0652 (304-417)||(402-514)
[»] scaffold0050 (1 HSPs)
scaffold0050 (307-416)||(70286-70394)
[»] scaffold0306 (1 HSPs)
scaffold0306 (306-418)||(13406-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (306-418)||(21804-21921)
[»] scaffold0053 (1 HSPs)
scaffold0053 (305-417)||(8805-8916)
[»] scaffold0361 (1 HSPs)
scaffold0361 (305-418)||(14536-14645)
[»] scaffold0083 (1 HSPs)
scaffold0083 (305-398)||(45471-45563)
[»] scaffold0793 (1 HSPs)
scaffold0793 (305-404)||(4822-4922)
[»] scaffold0003 (1 HSPs)
scaffold0003 (305-376)||(241653-241723)
[»] scaffold0475 (1 HSPs)
scaffold0475 (305-387)||(3345-3426)
[»] scaffold0004 (3 HSPs)
scaffold0004 (305-371)||(92875-92940)
scaffold0004 (372-417)||(92814-92859)
scaffold0004 (366-402)||(123650-123686)
[»] scaffold0049 (1 HSPs)
scaffold0049 (360-417)||(63780-63837)
[»] scaffold0019 (1 HSPs)
scaffold0019 (295-376)||(71784-71864)
[»] scaffold0223 (1 HSPs)
scaffold0223 (365-417)||(20179-20231)
[»] scaffold0103 (1 HSPs)
scaffold0103 (350-417)||(51818-51888)
[»] scaffold0011 (1 HSPs)
scaffold0011 (366-418)||(17750-17802)
[»] scaffold0044 (1 HSPs)
scaffold0044 (368-415)||(53189-53236)
[»] scaffold0027 (2 HSPs)
scaffold0027 (365-416)||(46690-46741)
scaffold0027 (300-339)||(46741-46780)
[»] scaffold0022 (1 HSPs)
scaffold0022 (305-416)||(90851-90961)
[»] scaffold0697 (1 HSPs)
scaffold0697 (350-416)||(1652-1718)
[»] scaffold0512 (1 HSPs)
scaffold0512 (305-387)||(4977-5058)
[»] scaffold0122 (1 HSPs)
scaffold0122 (356-418)||(8016-8077)
[»] scaffold0008 (2 HSPs)
scaffold0008 (306-376)||(263303-263372)
scaffold0008 (365-417)||(263372-263424)
[»] scaffold0007 (1 HSPs)
scaffold0007 (306-416)||(225199-225319)
[»] scaffold0246 (1 HSPs)
scaffold0246 (350-418)||(19582-19654)
[»] scaffold0085 (1 HSPs)
scaffold0085 (385-418)||(26399-26432)
[»] scaffold0036 (1 HSPs)
scaffold0036 (365-418)||(9747-9800)
[»] scaffold0722 (1 HSPs)
scaffold0722 (353-417)||(7020-7084)
[»] scaffold0025 (1 HSPs)
scaffold0025 (365-416)||(23777-23829)
[»] scaffold0021 (1 HSPs)
scaffold0021 (368-416)||(130490-130538)
[»] scaffold0020 (1 HSPs)
scaffold0020 (365-417)||(135312-135364)
[»] scaffold0236 (1 HSPs)
scaffold0236 (365-416)||(25768-25819)
[»] scaffold0136 (1 HSPs)
scaffold0136 (365-416)||(3849-3900)
[»] scaffold0086 (1 HSPs)
scaffold0086 (305-376)||(2987-3057)
[»] scaffold0380 (1 HSPs)
scaffold0380 (305-391)||(8634-8719)
[»] scaffold0110 (1 HSPs)
scaffold0110 (367-416)||(28858-28907)
[»] scaffold0018 (2 HSPs)
scaffold0018 (366-418)||(178819-178872)
scaffold0018 (372-416)||(192256-192300)
[»] scaffold0623 (1 HSPs)
scaffold0623 (305-373)||(5926-5993)
[»] scaffold0376 (1 HSPs)
scaffold0376 (365-417)||(6319-6371)
[»] scaffold0314 (1 HSPs)
scaffold0314 (366-410)||(8962-9006)
[»] scaffold0123 (1 HSPs)
scaffold0123 (369-417)||(44529-44577)
[»] scaffold0009 (1 HSPs)
scaffold0009 (311-343)||(188480-188512)


Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-171; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 5 - 418
Target Start/End: Original strand, 29446743 - 29447163
Alignment:
Q  5 ttctttgagtagaatatatattgtaatagacaaagatgttgttcctttgagaagctaccaacttgtgatgtttcatgttactcaatttgcagctgagaag 104  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29446743 ttctttgaagagaatatatattgtaatagacaaagatgttgttcctttgagaagctaccaacttgtgatgtttcatgttcctcaatttgcagctgagaag 29446842  T
Q  105 aatccagttttctcttcagtttatgcaagatgagtaagtaggtagttattattatgatcattcttgtttctttgattgttgttatatatctaagtgnnnn 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||| |||||||||||||||||        
T  29446843 aatccagttttctcttcagtttatgcaagatgagtaagtaggtag---ttattatgatcattcatgtttctttgattgatgttatatatctaagtgtttt 29446939  T
Q  205 nnnncttccatgtgttcatgtttgctatattgtgtaggattcagatttcatgcattgtgtgcatgacataataattgatcttggtcattcaatctcaaat 304  Q
        |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29446940 ttttcttccatgtgtttatgtttgctatattgtgtaggattcagatttcatacattgtgtgcatgacataataattgatcttggtcattcaatctcaaat 29447039  T
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtcc-----------gacaccgacacttgtagttacattgaat 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||           ||||||||||||||||||||||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtc-agacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaat 29447138  T
Q  394 tatgtgattttctcaaattattagt 418  Q
    |||||||||||||||||||||||||    
T  29447139 tatgtgattttctcaaattattagt 29447163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 36450695 - 36450807
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||| ||||||||| |||||||||||||||||| |||  |||||| ||||||||||||||| ||||||||| ||||| |||||| |||||||||    
T  36450695 tatgaagcacagacactcctcggattaggcgtgtcctggtgtcg-gacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatttt 36450793  T
Q  405 ctcaaattattagt 418  Q
     |||||||||||||    
T  36450794 ttcaaattattagt 36450807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 307 - 415
Target Start/End: Complemental strand, 40332307 - 40332200
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttct 406  Q
    |||| ||||||||||||| |||||||||| |||| || ||   |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgg-gacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttct 40332209  T
Q  407 caaattatt 415  Q
    |||||||||    
T  40332208 caaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 417
Target Start/End: Complemental strand, 3025668 - 3025558
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    ||||||||||||||||||| ||||||| ||||||   | |||| ||||||||||||||||||||| ||||| | || ||||| |||||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtca-gacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttc 3025570  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  3025569 tcaaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 417
Target Start/End: Complemental strand, 5813707 - 5813599
Alignment:
Q  308 gaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctc 407  Q
    |||||||||||||||||   ||||||||||||| || |||  |||||||||||||||||||||||||||||||| ||||| | || ||||||| ||| ||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcg-gacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttc 5813609  T
Q  408 aaattattag 417  Q
    ||||||||||    
T  5813608 aaattattag 5813599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 14134817 - 14134705
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||| ||||||||||||| | |||||||||||||||| | |  ||||||||||||||  ||||||||||  | || ||||| ||||||||||||||||    
T  14134817 tatgaaacacggacactcctcgaattaggcgtgtcctggtgacg-gacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgatttt 14134719  T
Q  405 ctcaaattattagt 418  Q
    ||||||||||||||    
T  14134718 ctcaaattattagt 14134705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 31557114 - 31557005
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||| ||| |||||| ||| |||||||||||||||||| |||  |||| |||||||||| |||||||| ||||||| ||||| ||||||||||||||||    
T  31557114 tatgaggcatggacacaccttggattaggcgtgtcctggtgtcg-gacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt 31557016  T
Q  405 ctcaaattatta 416  Q
     |||||||||||    
T  31557015 -tcaaattatta 31557005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 33405325 - 33405435
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||| ||||||||||||| | ||||||| ||||||| || |||| |||| |||||||||||||||||||||| | || ||||| | ||||||||| ||||    
T  33405325 tatggagcacggacactcattggattagccgtgtccaggtgtca-gacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgttttt 33405423  T
Q  405 ctcaaattatta 416  Q
    ||||||||||||    
T  33405424 ctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 4948718 - 4948658
Alignment:
Q  358 tcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagt 4948658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 18407837 - 18407726
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||||||   |||||||||||||| | |||  |||| |||||||||||| || ||||||||||| ||||| ||||||||||||||||    
T  18407837 tatgaagcacggacactcctccaattaggcgtgtcctagtgtcg-gacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttt 18407739  T
Q  405 ctcaaattattag 417  Q
     |  |||||||||    
T  18407738 tttgaattattag 18407726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 926730 - 926840
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    ||||||||||||||||||| |||| | || ||||| || |||  ||||||||||| ||||||||||||||||| || ||||| ||||  ||| |||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcg-gacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttc 926828  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  926829 tcaaattattag 926840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 20679337 - 20679447
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    |||||||| |||||||||| || | |||||||||| || |||  ||||||||| | ||| ||||||||||||| || ||||| |||| ||||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcg-gacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttc 20679435  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  20679436 tcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 20873143 - 20873077
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||| |||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||    
T  20873143 gacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 417
Target Start/End: Original strand, 37283751 - 37283862
Alignment:
Q  300 caaattatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtg 399  Q
    |||| |||||||||||| ||||||| ||||||| ||||||| ||     ||||||||||||||||| |||||||||| |  | ||||| |||||||||||    
T  37283751 caaactatgaagcacgggcactcctcggattagacgtgtcccggt----agacacgtgtcgtgtcccacaccgacacat--aattacactgaattatgtg 37283844  T
Q  400 attttctcaaattattag 417  Q
    ||||||||| ||||||||    
T  37283845 attttctcagattattag 37283862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 31236570 - 31236629
Alignment:
Q  358 tcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||| ||||||||| | || |||||||||||||||||||||||||||||||||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattag 31236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 34450962 - 34451032
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||||| |||| ||||||||||  | ||| ||||||||||||||||||||||||||||    
T  34450962 tatgaagcacggacactccttggataaggcgtgtccccgtgtc-agacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 22652105 - 22651983
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac-----------ttgtagttacattgaat 393  Q
    |||||||||||||||||||| ||||||| ||||||| || |||  ||||| |||||||||||||||||||||           ||||| ||| |||||||    
T  22652105 tatgaagcacggacactcctcggattagacgtgtcccggtgtcg-gacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  394 tatgtgattttctcaaattattag 417  Q
    ||||||||||| ||||||||||||    
T  22652006 tatgtgattttttcaaattattag 22651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 43737751 - 43737851
Alignment:
Q  304 ttatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattt 403  Q
    ||||||||||||||||||||| |||| |||||| |||  | |||| ||||| ||||||||||||||||||||| | || ||||| || ||| ||||||||    
T  43737751 ttatgaagcacggacactccttggataaggcgtatccccgtgtca-gacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgattt 43737849  T
Q  404 tc 405  Q
    ||    
T  43737850 tc 43737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 25566900 - 25566848
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 25566848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 26434254 - 26434186
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||| | |||||| |||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  26434254 gacacgtattgtgtccaacaccgacacttttaattatattgaattatgtgattttctcaaactattagt 26434186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 29510234 - 29510305
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacact 377  Q
    |||||||||||||||||||| |||||||| |||||| || |||  |||||| |||||||||||||||||||||    
T  29510234 tatgaagcacggacactcctcggattaggtgtgtcccggtgtc-ggacacgcgtcgtgtccgacaccgacact 29510305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 41831876 - 41831991
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacacc-----gacacttgtagttacattgaattatgtg 399  Q
    ||||||| | |||||||||| | ||||| |||||||||  |||  || |||| ||||||||||||||     |||||||||||||||| |||||||||||    
T  41831876 tatgaagaatggacactcctcgaattagacgtgtcctgttgtcg-gatacgtatcgtgtccgacaccaacacgacacttgtagttacactgaattatgtg 41831974  T
Q  400 attttctcaaattatta 416  Q
    ||||| |||||||||||    
T  41831975 attttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 22596068 - 22596001
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||| |||||||||| ||||||||| ||||| |||||||||| ||||| | ||||||||||    
T  22596068 gacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattag 22596001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 416
Target Start/End: Original strand, 4298887 - 4298937
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattatta 4298937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 24613585 - 24613528
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattag 24613528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 416
Target Start/End: Original strand, 4786324 - 4786389
Alignment:
Q  351 acacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||| |||||| |||||||||||||| | || ||||| |||||||||||||||||| |||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 13844591 - 13844648
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| | || ||||| | |||||||||||||||||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattag 13844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 418
Target Start/End: Complemental strand, 31514943 - 31514878
Alignment:
Q  354 cgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga-ttttctcaaattattagt 418  Q
    |||||||||||| ||||| ||||||||||||||  |||||||||||| |||| |||||||||||||    
T  31514943 cgtgtcgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagt 31514878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 34897149 - 34897092
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||| |||||| | || ||||| |||||||||||||||||||||||||||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattag 34897092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 2572056 - 2572108
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| | |||||||||||||| ||||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 8343031 - 8342979
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| | |||||||||||||| ||||||||||||    
T  8343031 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 8342979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 417
Target Start/End: Original strand, 12606825 - 12606881
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| ||||||||||| | || |||||||||||||| ||||||||||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattag 12606881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 12985456 - 12985400
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||  | |  ||||||||||||||||||||||||||||||||||    
T  12985456 gtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 28745557 - 28745505
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  28745557 cgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattag 28745505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 3951477 - 3951547
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||| |||||| ||||||||||||| |  | ||| |||||||||||||||| |||||||||||    
T  3951477 tatgaagcacggaaactccttggattaggcgtgttcccgtgtc-agacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 412
Target Start/End: Original strand, 18170478 - 18170529
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatt 412  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||| |||||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 412
Target Start/End: Original strand, 18634046 - 18634097
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatt 412  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||| |||||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 24669492 - 24669441
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||| ||||| |||||||||| |||| ||||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 8343381 - 8343323
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||| |||||||||| ||||| | |||||||||||||| ||||||||||||    
T  8343381 cgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattag 8343323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 30077385 - 30077439
Alignment:
Q  363 tccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||| |||||||||| ||||| ||||||||||||| || ||||||||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattag 30077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 15816129 - 15816182
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||| || ||||| | |||||||||||||| |||||||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagt 15816182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 13436964 - 13437016
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||  ||||  |||||||||||||||| ||||||||||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattag 13437016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 21465471 - 21465419
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| ||||||||| |||||| ||||||| ||||||| ||||||||||||    
T  21465471 cgacaccaacacttgtaattacatcgaattatatgattttttcaaattattag 21465419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 42874596 - 42874536
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    |||| |||| |||||| |||| |||||||||  |||||||||||||||| |||||||||||    
T  42874596 gacatgtgttgtgtccaacactgacacttgtgattacattgaattatgtcattttctcaaa 42874536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 11927086 - 11927137
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||| | || ||||| |||||||||||||||| |||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 15816059 - 15816129
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||||||| || ||||||||||||||| || |||  ||  |||||||||||||||||| ||||    
T  15816059 tatgaagcacggacacttctcggattaggcgtgtcccggtgtc-ggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 511
Target Start/End: Original strand, 29447225 - 29447256
Alignment:
Q  480 atgcttcatagatctcaaacaatcttgtaact 511  Q
    ||||||||||||||||||||||||||||||||    
T  29447225 atgcttcatagatctcaaacaatcttgtaact 29447256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 15023242 - 15023288
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattat 396  Q
    |||||||||||| ||||||| ||||||||||| ||||| ||||||||    
T  15023242 gacacgtgtcgtatccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 31514972 - 31514938
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtc 339  Q
    |||||||||||||||||||| ||||||||||||||    
T  31514972 tatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 1433409 - 1433356
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatta 413  Q
    ||||||||||||||| | |||  |||||||| ||||||| ||||||||||||||    
T  1433409 gtgtccgacaccgacgcatgttattacattggattatgtcattttctcaaatta 1433356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 3508093 - 3508060
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  3508093 ttacattgaattatgttattttctcaaattatta 3508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 9383084 - 9383047
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctg 342  Q
    ||||||||||||||||| || |||||||||||||||||    
T  9383084 tatgaagcacggacactgcttggattaggcgtgtcctg 9383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 14227263 - 14227230
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  14227263 ttacattgaattatgttattttctcaaattatta 14227230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 16641910 - 16641974
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac 370  Q
    |||||||||| ||||||||| |||||||| |||||| || || | ||||| |||||||||||||||    
T  16641910 tatgaagcacagacactcctcggattaggtgtgtcccggtgtta-gacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 26902105 - 26902169
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac 370  Q
    ||||||||||||||||||||  ||| ||||||||||  | | | ||||||||||||||||||||||    
T  26902105 tatgaagcacggacactcctcagataaggcgtgtccccgtg-ccagacacgtgtcgtgtccgacac 26902169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 29198497 - 29198530
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  29198497 ttacattgaattatgtcattttctcaaattatta 29198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 31580117 - 31580178
Alignment:
Q  355 gtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||| |||||||| |||||| | || ||||| | |||||||||||||||| |||||||||    
T  31580117 gtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttcttaaattatta 31580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 34201064 - 34201097
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  34201064 ttacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 37225761 - 37225794
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  37225761 ttacattgaattatgttattttctcaaattatta 37225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 44067644 - 44067607
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctgg 343  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctgg 44067607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 6501559 - 6501503
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||| ||||||||||| ||| |||||||| |||||| | ||| |||||||||||||    
T  6501559 gtgtctgacaccgacacatgtggttacatttaattatttcattctctcaaattatta 6501503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 402
Target Start/End: Original strand, 9414860 - 9414912
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatt 402  Q
    ||||||||||||||| |||||| |||||| || || || ||||||||||||||    
T  9414860 gacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgatt 9414912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 417
Target Start/End: Original strand, 18067958 - 18067986
Alignment:
Q  389 tgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||||||||||    
T  18067958 tgaattatgtgattttctcaaattattag 18067986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 24858134 - 24858032
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac-----cgacacttgtagttacattgaattatgtg 399  Q
    ||||||||||  ||||||||  |||||||||||||| || ||   ||||| |||||||||||||||     ||||||||||| ||||| |||||||||||    
T  24858134 tatgaagcacaaacactcctctgattaggcgtgtcccggcgt-gggacacatgtcgtgtccgacacgacaacgacacttgta-ttacactgaattatgtg 24858037  T
Q  400 atttt 404  Q
    |||||    
T  24858036 atttt 24858032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 34259790 - 34259846
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||| |||||||||| | |||||| ||| |||||| | |||||||||||||||||    
T  34259790 gtgtccaacaccgacacgtctagttatattcaattatttcattttctcaaattatta 34259846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 41838131 - 41838175
Alignment:
Q  373 acacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| || |||||||||||||||| | ||||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattag 41838175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 85)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 34595252 - 34595140
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||||||| |||||| || |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  34595252 tatgaagcacggacactcctcggattaggtgtgtcccggtgtca-gacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T
Q  405 ctcaaattattagt 418  Q
     |||||||||||||    
T  34595153 ttcaaattattagt 34595140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 28152216 - 28152106
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||| |||||||| ||||||||| ||||| || |||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  28152216 tatgaagcacgaacactcctcggattaggcctgtcccggtgtcg-gacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 28152118  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  28152117 -tcaaattattag 28152106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 28715413 - 28715302
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||| ||||| || | ||||||||||||| || ||| | ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  28715413 tatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcga-acacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcatttt 28715315  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  28715314 ttcaaattattag 28715302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 17841530 - 17841641
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| ||||||||||||||   | |||  ||||| ||||||||||||||||| |||||||| ||||| | ||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcg-gacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgatttt 17841628  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  17841629 ttcaaattattag 17841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 4878060 - 4877949
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga-ttt 403  Q
    |||||||||||||||||||| |||||||||||||||||  |||  |||| ||||||||||||||||||||||||||| ||| | | |||||||||| |||    
T  4878060 tatgaagcacggacactcctcggattaggcgtgtcctgt-gtcg-gacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttt 4877963  T
Q  404 tctcaaattattag 417  Q
    | ||||||||||||    
T  4877962 tttcaaattattag 4877949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 418
Target Start/End: Complemental strand, 31385051 - 31384926
Alignment:
Q  302 aattatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtc----------cgacaccgacacttgtagttacattga 391  Q
    ||||||||||||||||||||||| ||||||||||||||| || || | |||||||||||||||          |||||| |||||||||| ||||| |||    
T  31385051 aattatgaagcacggacactccttggattaggcgtgtcccggtgt-aggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactga 31384953  T
Q  392 attatgtgattttctcaaattattagt 418  Q
    ||||||||||||| |||||||||||||    
T  31384952 attatgtgattttttcaaattattagt 31384926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 307 - 417
Target Start/End: Original strand, 32978842 - 32978952
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtg-attttc 405  Q
    |||||||||||||||||| ||||||| ||||||| || |||  |||| ||||||||||||||||||||||||||| ||||| | |||||||||  ||||     
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcg-gacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttt 32978940  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  32978941 tcaaattattag 32978952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 9658998 - 9658886
Alignment:
Q  305 tatgaagcacggacactcctagga-ttaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattt 403  Q
    |||||||||||||||||||| ||| |||||||||| | || |||| |||||||||||||||  |||||||||  | || ||||| |||||||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtca-gacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattt 9658900  T
Q  404 tctcaaattattag 417  Q
    ||| ||||||||||    
T  9658899 tcttaaattattag 9658886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 16833426 - 16833314
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||| || ||||||||| ||||| || ||||||||| |||  ||| |||||||||||  ||||||||||||||| ||||| |||| |||||||||||    
T  16833426 tatgaagtacagacactcctcggattcggtgtgtcctggtgtcg-gacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgatttt 16833328  T
Q  405 ctcaaattattagt 418  Q
     |||||||||||||    
T  16833327 ttcaaattattagt 16833314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 348 - 416
Target Start/End: Original strand, 403847 - 403915
Alignment:
Q  348 aagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||| ||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  403847 aagacaggtgacgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 7378097 - 7377986
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||| ||  |||||| ||||||| || |||  ||  | ||||||||||||||||||||| | || ||||||||||||||||||||||    
T  7378097 tatgaagcacggacacttctcagattagccgtgtcccggtgtcg-gatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgatttt 7377999  T
Q  405 ctcaaattattag 417  Q
    |||||||| ||||    
T  7377998 ctcaaatttttag 7377986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 33001273 - 33001341
Alignment:
Q  349 agacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||||||||| | || ||||||| |||||||||||||| ||||||||||||    
T  33001273 agacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 8776909 - 8777026
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagaca-----cgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtg 399  Q
    |||||||||||||||||||| |||||||| |||||  || |||  ||||     |||||||||||||||||| ||||||||| ||||| |||||| ||||    
T  8776909 tatgaagcacggacactcctcggattaggtgtgtctcggtgtc-ggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtg 8777007  T
Q  400 attttctcaaattattagt 418  Q
    ||||| |||||||||||||    
T  8777008 attttttcaaattattagt 8777026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 410
Target Start/End: Original strand, 17327591 - 17327700
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacacc-----gacacttgtagttacattgaattatgtg 399  Q
    |||||||||||||||||||| |||||||||||||||  | |||| |||||||||||||||||||||      ||||| | |||||||| | |||||||||    
T  17327591 tatgaagcacggacactcctcggattaggcgtgtccctgtgtca-gacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtg 17327689  T
Q  400 attttctcaaa 410  Q
    |||||||||||    
T  17327690 attttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 416
Target Start/End: Original strand, 426508 - 426565
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattatta 426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 24645599 - 24645487
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga-ttt 403  Q
    |||||||||| ||||||| | ||||||| |||||| ||| |||  ||||||||||||||| ||||||||||||||||  || | |||||||||||| |||    
T  24645599 tatgaagcacagacactcttcggattagacgtgtcttggtgtcg-gacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttt 24645501  T
Q  404 tctcaaattattag 417  Q
    | ||||||||||||    
T  24645500 tttcaaattattag 24645487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 417
Target Start/End: Complemental strand, 12696446 - 12696331
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacacc-----gacacttgtagttacattgaattatgtga 400  Q
    ||||||||| ||||||||| |||| ||| |||||| || |||| |||||||||||||||||||||      |||||||||| ||||| |||||||||| |    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtca-gacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaa 12696348  T
Q  401 ttttctcaaattattag 417  Q
    |||| ||||||||||||    
T  12696347 ttttttcaaattattag 12696331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 32511607 - 32511718
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||||||  |||||||||||  | |  |||| ||||  |||||| ||||||||| |||||| || ||||| ||||||||||||||||    
T  32511607 tatgaagcacggacactcctccgattaggcgtgctccgatgtca-gacatatgtcgtatccgacaccaacacttataattacactgaattatgtgatttt 32511705  T
Q  405 ctcaaattattag 417  Q
    || ||||||||||    
T  32511706 cttaaattattag 32511718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 7265535 - 7265645
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    ||||||||||||| ||||| ||||||||| | | | || |||  |||| || | ||||||||||||||||| | || ||||| |||||||||||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcg-gacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttc 7265633  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  7265634 tcaaattattag 7265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 19040421 - 19040359
Alignment:
Q  355 gtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||| ||||| | || ||||| |||||||||||||||||||||||||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattag 19040359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 7977825 - 7977882
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattag 7977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 10770674 - 10770727
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagt 10770727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 414
Target Start/End: Original strand, 13364646 - 13364754
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||| ||||||| | ||| ||| |||||||||| |||| |||| || |||||||| |||||||||| | |  ||||| |||||||| |||||||    
T  13364646 tatgaagcacagacactcgtcggaatagacgtgtcctggtgtca-gacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgatttt 13364744  T
Q  405 ctcaaattat 414  Q
    ||||||||||    
T  13364745 ctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 30851675 - 30851609
Alignment:
Q  349 agacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||||||||| | || |||||||||||  ||||||||||| ||||||||||    
T  30851675 agacacgtgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttcttaaattattag 30851609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 853844 - 853912
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||| |||||| ||||||||||||||||||| || || | |||||||||||||| |||||||||||||    
T  853844 gacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagt 853912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 16766756 - 16766704
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 16766704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 9617493 - 9617442
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 415
Target Start/End: Complemental strand, 9629443 - 9629392
Alignment:
Q  364 ccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatt 415  Q
    ||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 31579212 - 31579276
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||| |||||||||||||||||||||| |  | ||||| ||||||||||||||||||||||||||||    
T  31579212 gacatgtgtcgtgtccgacaccgacacat--aattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 7801155 - 7801209
Alignment:
Q  364 ccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||||| ||||  |||||||||||||||| |||||||||||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagt 7801209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 6751878 - 6751927
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  6751878 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 6751927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 417
Target Start/End: Original strand, 7996325 - 7996430
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttct 406  Q
    ||||||||||| |||||| |||||||||||||||  | || | |||||||||||    |||||||||| | | || ||||| |||||||| |||||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgtta-gacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttct 7996419  T
Q  407 caaattattag 417  Q
    |||||||||||    
T  7996420 caaattattag 7996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 417
Target Start/End: Complemental strand, 8022476 - 8022371
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttct 406  Q
    ||||||||||| |||||| |||||||||||||||  | || | |||||||||||    |||||||||| | | || ||||| |||||||| |||||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgtta-gacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttct 8022382  T
Q  407 caaattattag 417  Q
    |||||||||||    
T  8022381 caaattattag 8022371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 6898222 - 6898333
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||| |||||| | |||||||||||||   || ||   ||||||  |||||||||||||||||||||||| ||||| | |||||||| ||||     
T  6898222 tatgaagcacgaacactcatcggattaggcgtgtttcggtgttg-gacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaatttg 6898320  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  6898321 ttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 9025494 - 9025546
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || ||||| |||||||||||||||||||||||||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 9107370 - 9107422
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattag 9107422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 15489733 - 15489785
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||| |||||||||||| ||| ||||| |||||||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagt 15489785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 1191685 - 1191752
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||| ||||||||| ||| ||||||||||| ||||| |||||| ||||| ||| ||||||||||||    
T  1191685 gacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattag 1191752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 8365449 - 8365519
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||| |||||| |||||||||||||||  | |||  |||||||||||||||||| ||||||||    
T  8365449 tatgaagcacggagactcctcggattaggcgtgtcccagtgtc-ggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 10339055 - 10339125
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||||||||||  ||||||||||||||  | |||  |||| ||||||||||||||||||||||    
T  10339055 tatgaagcacggacactcctccgattaggcgtgtcccagtgtc-ggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 16766826 - 16766756
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||||| || | ||||||||||||||| || |||  ||||||||| |||||||||||||||||    
T  16766826 tatgaagcacggacattcttcggattaggcgtgtcccggtgtc-ggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 18367965 - 18367895
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||||| |||| ||||||||||  | ||| ||||| |||||||||| |||||||||||    
T  18367965 tatgaagcacggacactccttggataaggcgtgtccccgtgtc-agacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 30866149 - 30866196
Alignment:
Q  370 ccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| | || |||||||||||||||||||||||||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattag 30866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 9522948 - 9522898
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||| ||||| |||||||||||||||| | ||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 417
Target Start/End: Complemental strand, 31959270 - 31959166
Alignment:
Q  303 attatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatt 402  Q
    |||||||||||||||||||||| |||||||| |||||| || |||  ||||| |||||         |||||||||||| ||||| || |||||||||||    
T  31959270 attatgaagcacggacactcctcggattaggtgtgtcccggtgtcg-gacacatgtcg---------ccgacacttgtaattacactgcattatgtgatt 31959181  T
Q  403 ttctcaaattattag 417  Q
    || ||||||||||||    
T  31959180 ttttcaaattattag 31959166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 417
Target Start/End: Complemental strand, 43760 - 43723
Alignment:
Q  380 tagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||| |||||||||||||||||||||    
T  43760 tagttacattgaattacgtgattttctcaaattattag 43723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 416
Target Start/End: Original strand, 5732504 - 5732561
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||| | || ||||| | || |||||||||||||||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattatta 5732561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 8365519 - 8365572
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| |||||  |||||||||||| || |||||||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagt 8365572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 13360314 - 13360425
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||| | ||||||||||||||   | |||  ||||  ||| ||||| |||||||| || | || ||||| ||||||||||||||||    
T  13360314 tatgaagcacggacactcttcggattaggcgtgtctcagtgtcg-gacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgatttt 13360411  T
Q  405 ctcaaattattagt 418  Q
    ||||||||| ||||    
T  13360412 ctcaaattactagt 13360425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 19369876 - 19369831
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||    
T  19369876 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 21924930 - 21924987
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| | || ||||| |||||||| |||| |||||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattag 21924987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 32299332 - 32299283
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||| | ||  |||||||||||||||||||||||||||||||||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaattatta 32299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 416
Target Start/End: Original strand, 2140496 - 2140532
Alignment:
Q  380 tagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||| |||||||||||||||||    
T  2140496 tagttacattgaattatgtcattttctcaaattatta 2140532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 20371110 - 20371162
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || | ||||||| |||||||||||||||||||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattag 20371162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 21395308 - 21395359
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| | |||||||| ||||||||||||||||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattag 21395359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Complemental strand, 1681811 - 1681764
Alignment:
Q  371 cgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagt 1681764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 4118341 - 4118384
Alignment:
Q  373 acacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 5970108 - 5970159
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||    
T  5970108 cgacacccacatttgtaattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 7490152 - 7490081
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||| | ||||||||| | ||| ||||||  |||| || |||||||||||||| ||||    
T  7490152 tatgaagcacggacactctttggattaggcatatccgggagtcgggacatgtatcgtgtccgacaccaacac 7490081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 10649406 - 10649371
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  10649406 tatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 16488520 - 16488590
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||| ||| |||| |||| ||||||||||  | | | ||||||||||||||||||||||||||||    
T  16488520 tatgaagcacgaacattccttggataaggcgtgtccccgtg-ccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 17302609 - 17302562
Alignment:
Q  372 gacacttgtagttacattgaattatgtga-ttttctcaaattattagt 418  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  17302609 gacacttgtaattacattgaattatgtgatttttttcaaattattagt 17302562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 414
Target Start/End: Complemental strand, 1700416 - 1700362
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    ||||||||||||||||||| || ||||| |||| ||||||||||| | |||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 417
Target Start/End: Complemental strand, 2117129 - 2117083
Alignment:
Q  371 cgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||| || || ||||||||||||||||||| ||||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 7086852 - 7086802
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||| | || ||||| | |||||||||||||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattag 7086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 415
Target Start/End: Complemental strand, 7740712 - 7740650
Alignment:
Q  353 acgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatt 415  Q
    |||||||||||||||||| ||||| | || ||||| | |||| |||||||||| |||||||||    
T  7740712 acgtgtcgtgtccgacactgacacatataattacactcaattttgtgattttcacaaattatt 7740650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 403
Target Start/End: Original strand, 9911528 - 9911566
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattt 403  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  9911528 cgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 16388206 - 16388248
Alignment:
Q  354 cgtgtcgtgtccgacaccgacacttgtagttacattgaattat 396  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||    
T  16388206 cgtgccgtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 26402673 - 26402719
Alignment:
Q  358 tcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||    
T  26402673 tcgtgtccgacaccgacacttgtgattacactgaattatgtcatttt 26402719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 5462727 - 5462694
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    ||||| ||||||||||||||||||||||||||||    
T  5462727 ttacaatgaattatgtgattttctcaaattatta 5462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 338
Target Start/End: Original strand, 7723200 - 7723233
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgt 338  Q
    |||||||||||||||||||| |||||||||||||    
T  7723200 tatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 7938180 - 7938123
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| ||||||||||||| || ||||| | |||||| ||||||| ||||||||||||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattag 7938123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 17341619 - 17341660
Alignment:
Q  302 aattatgaagcacggacactcctaggattaggcgtgtcctgg 343  Q
    |||||||||||||  |||||||| ||||||||||||||||||    
T  17341619 aattatgaagcacaaacactcctcggattaggcgtgtcctgg 17341660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 29049926 - 29049893
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  29049926 ttacattgaattatgtaattttctcaaattatta 29049893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 29711319 - 29711270
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||| ||| |||| | |||||||||| |||||||||||||||||    
T  29711319 acaccgacacatgtggttataatgaattatgtcattttctcaaattatta 29711270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 9027237 - 9027185
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || |||||  ||||||||||||| ||||||||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattag 9027185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 9195754 - 9195806
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || ||||| | |||||||| ||||||||||||||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 413
Target Start/End: Complemental strand, 10158039 - 10157995
Alignment:
Q  369 accgacacttgtagttacattgaattatgtgattttctcaaatta 413  Q
    |||||||| |||  |||||||||||||||| ||||||||||||||    
T  10158039 accgacacatgtgattacattgaattatgtcattttctcaaatta 10157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 10294166 - 10294114
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || |||||||||| |||| |||| ||||||||||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattag 10294114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 416
Target Start/End: Complemental strand, 17168938 - 17168902
Alignment:
Q  380 tagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  17168938 tagttacattgaattatgtcattttttcaaattatta 17168902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  372 gacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||| || ||||| |||||||||||||||| |||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 19044522 - 19044470
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||| | || | ||| ||||||||||||| ||||||||||||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagt 19044470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 417
Target Start/End: Original strand, 20370476 - 20370532
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| ||||| ||||||| ||  ||||||||| ||||| ||||||||||||||||||    
T  20370476 tgtctgacactgacacttatacctacattgaaatatgtaattttctcaaattattag 20370532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 26562748 - 26562696
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||| | || ||||| |||||||||||||||||||||||| ||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttctcaaatttttag 26562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 34073347 - 34073399
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||| | | || ||||| ||||||||| |||||||||||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattag 34073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 7e-35; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 21190998 - 21191108
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    ||||||||||||||||||| ||||||||||||||| ||||||  ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||     
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcg-gacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttt 21191096  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  21191097 tcaaattattag 21191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 21576686 - 21576797
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||||||||||||||  | |||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  21576686 tatgaagcacggacactcctcggattaggcgtgtcccagtgtca-gacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  21576785 ttcaaattattag 21576797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 28588615 - 28588725
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||| |||||||| | |||||| ||||||||||| |||| || | |||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  28588615 tatgaagcatggacactcttcggattaagcgtgtcctggtgtca-gatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgatttt 28588713  T
Q  405 ctcaaattatta 416  Q
    ||||||||||||    
T  28588714 ctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 27932353 - 27932242
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||  |||||||| | |||||||||||||||| |||  |||||||||||||||||||||| | | ||||| ||||| |||||||||| |||||    
T  27932353 tatgaagcacaaacactcctcgaattaggcgtgtcctggtgtcc-gacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaatttt 27932255  T
Q  405 ctcaaattattag 417  Q
    |||||||||||||    
T  27932254 ctcaaattattag 27932242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 42893478 - 42893367
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||| ||||||||||   |||||||||||||||| |||  ||||||||| ||||| |||||||||||||||| ||||| || |||||||||||||    
T  42893478 tatgaagcatggacactcctcatattaggcgtgtcctggtgtcg-gacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttt 42893380  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  42893379 ttcaaattattag 42893367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 31084446 - 31084330
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac-----cgacacttgtagttacattgaattatgtg 399  Q
    |||||| ||||||||||||| ||||||||| |||||  | |||  |||||||||||||||||||||     ||||||||||| |||||||||||||||||    
T  31084446 tatgaaccacggacactcctcggattaggcatgtcccagtgtcg-gacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtg 31084348  T
Q  400 attttctcaaattattag 417  Q
    ||||| ||||||||||||    
T  31084347 attttttcaaattattag 31084330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 305 - 414
Target Start/End: Complemental strand, 43564999 - 43564891
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||| || ||||||||||||||| || |||  ||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||    
T  43564999 tatgaagcacggacacttctcggattaggcgtgtcccggcgtcg-gacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 43564901  T
Q  405 ctcaaattat 414  Q
      ||||||||    
T  43564900 tccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 306 - 417
Target Start/End: Complemental strand, 43001922 - 43001807
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac-----cgacacttgtagttacattgaattatgtga 400  Q
    ||||||||||||||||||| ||||||||||||||| || ||   |||||||||||||||||||||     | ||||||||| ||||| |||||||||| |    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgttt-gacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaa 43001824  T
Q  401 ttttctcaaattattag 417  Q
    |||| ||||||||||||    
T  43001823 ttttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 6247692 - 6247629
Alignment:
Q  354 cgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  6247692 cgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 30502330 - 30502440
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    |||||||||| ||| |||| ||||||||| |||||  | |||  |||| |||||||||||||||||||||| | || ||||| ||||||| |||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcg-gacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttc 30502428  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  30502429 tcaaattattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 30542673 - 30542783
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    |||||||||| ||| |||| ||||||||| |||||  | |||  |||| |||||||||||||||||||||| | || ||||| ||||||| |||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcg-gacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttc 30542771  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  30542772 tcaaattattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 26312875 - 26312778
Alignment:
Q  317 acactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatt 415  Q
    |||||||| |||||||| ||||||||| |||| ||||||| |||||||||||||||| || | || ||||| |||||||  ||||||||||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtca-gacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatt 26312778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 8420089 - 8420034
Alignment:
Q  362 gtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaattattag 8420034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 13287399 - 13287450
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 15884057 - 15884008
Alignment:
Q  355 gtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 42029870 - 42029770
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||| |||||||||||||| |||| |||||||||   | | || |||| ||||||||||||||||||| || | || ||||||||||||||||||||||    
T  42029870 tatgatgcacggacactcctcggataaggcgtgtctacgtgaca-gacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgatttt 42029772  T
Q  405 ct 406  Q
    ||    
T  42029771 ct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 413
Target Start/End: Original strand, 21194068 - 21194171
Alignment:
Q  309 aagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctca 408  Q
    |||||||||||||||| |||||||||||| || || |||  |||| ||||||||||| ||||| | || | || ||||| ||||| ||||||||||||||    
T  21194068 aagcacggacactcctcggattaggcgtgccccggtgtct-gacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgattttctca 21194166  T
Q  409 aatta 413  Q
    |||||    
T  21194167 aatta 21194171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 23012392 - 23012460
Alignment:
Q  349 agacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| ||||||||||| |||||||||| | || ||||||| |||||| ||||||||||||||||||||    
T  23012392 agacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattag 23012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 30098455 - 30098334
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgac-----------accgacacttgtagttacattgaat 393  Q
    ||||||||||||||| |||| |||||||| ||||||||| |||  |||||||||||||||||||           |||||||  | || |||||||||||    
T  30098455 tatgaagcacggacattcctcggattaggtgtgtcctggtgtc-tgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaat 30098357  T
Q  394 tatgtgattttctcaaattatta 416  Q
    |||||||||||||||||||||||    
T  30098356 tatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 32630720 - 32630786
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||| |||||||| ||||| | || |||||||||||||| | |||||||||||||||||    
T  32630720 gacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaattatta 32630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 418
Target Start/End: Complemental strand, 33178089 - 33178031
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| | |||||||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagt 33178031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 418
Target Start/End: Complemental strand, 4105374 - 4105263
Alignment:
Q  308 gaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga--ttttc 405  Q
    ||||||||||||||||| |||||||||||||||  |  || |||||| | ||| ||| || ||| ||||||||| ||||| ||||||||||||  ||||     
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatc-agacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatcttttt 4105276  T
Q  406 tcaaattattagt 418  Q
    |||||||||||||    
T  4105275 tcaaattattagt 4105263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 5894833 - 5894886
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||    
T  5894833 cgacaccgacacttgtagttagattaaattatatgattttttcaaattattagt 5894886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 10298628 - 10298575
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| |||||||| ||||||||| ||| |||||||||||||    
T  10298628 cgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagt 10298575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 39698670 - 39698548
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac-----------ttgtagttacattgaat 393  Q
    |||||||||||||||||||| ||||||||||||||  || |||  || || |||||||||||||||||||||           ||||| ||||| |||||    
T  39698670 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcg-gatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  394 tatgtgattttctcaaattattag 417  Q
    ||||||||||| ||||||||||||    
T  39698571 tatgtgattttttcaaattattag 39698548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 6401628 - 6401557
Alignment:
Q  304 ttatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||||||||||| |||| |||||| |||  | ||| |||||||||||||||||||||| |||||    
T  6401628 ttatgaagcacggacactccttggataaggcgtatccccgtgtc-agacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 416
Target Start/End: Complemental strand, 9449513 - 9449477
Alignment:
Q  380 tagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||||||||||||||||||||||    
T  9449513 tagttacattgaattatgtgattttctcaaattatta 9449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 18421826 - 18421890
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    |||| |||||||||||||| ||||||| | || ||||| || |||||||||||||||||||||||    
T  18421826 gacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 19579760 - 19579708
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| || || | |||||||||||||||||||||||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattag 19579708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 21542160 - 21542089
Alignment:
Q  304 ttatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||| ||||||||| |||| ||||| ||||||||| || |||  |||||||||||||||||||||||||||    
T  21542160 ttatgatgcacggacattccttggattcggcgtgtcccggtgtcg-gacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 24906292 - 24906352
Alignment:
Q  356 tgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||| ||||||| ||||||||||||| ||||| |||||||||| ||||| |||||||||||    
T  24906292 tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattatta 24906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 21522879 - 21522809
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||| |||||||||||| | ||||||||||||||| || | |  |||||||||||||||||||||||||||    
T  21522879 tatgatgcacggacactctttggattaggcgtgtcccggtgccg-gacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 21533445 - 21533375
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||| |||||||||||| | ||||||||||||||| || | |  |||||||||||||||||||||||||||    
T  21533445 tatgatgcacggacactctttggattaggcgtgtcccggtgccg-gacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 41995581 - 41995546
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcct 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  41995581 atgaagcacggacactcctaggattaggcgtgtcct 41995546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 414
Target Start/End: Complemental strand, 14873640 - 14873527
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtcc-----gacaccgacacttgtagttacattgaattatgtg 399  Q
    |||||||||||||||||||| ||||||||||||||| || ||   ||||||||| | ||||     ||||||||||| | || ||||| | |||||||||    
T  14873640 tatgaagcacggacactcctcggattaggcgtgtcccggtgt-tggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtg 14873542  T
Q  400 attttctcaaattat 414  Q
     ||||||||||||||    
T  14873541 cttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 418
Target Start/End: Original strand, 15405062 - 15405108
Alignment:
Q  372 gacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagt 15405108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 16203785 - 16203847
Alignment:
Q  355 gtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||||||||||||| | || ||||| | ||||||| |||||||||||||||||||    
T  16203785 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattag 16203847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 402
Target Start/End: Original strand, 30098982 - 30099075
Alignment:
Q  308 gaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatt 402  Q
    |||||||| |||||||| |||| ||||||||||  | |||| |||||||||||| |||||||||||||| | || |||||  |||||||| ||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtca-gacacgtgtcgtatccgacaccgacacatataattacacagaattatgcgatt 30099075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 6326292 - 6326345
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatta 413  Q
    ||||||||| | |||||||||| ||||| |||||||||| ||||||||||||||    
T  6326292 gtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaatta 6326345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 22423812 - 22423865
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||  | || ||| ||||||||||||||||||||||||||||||||    
T  22423812 cgacaccgacatatataattatattgaattatgtgattttctcaaattattagt 22423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 39268541 - 39268609
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||| |||||||||||||||  | |||  ||||| |||||||||| ||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtc-ggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 2548451 - 2548395
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||| |  ||||| |||||||||| |||||||| ||||||||    
T  2548451 gtgtccgacaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 3966562 - 3966510
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || ||||| |||||| ||||||||||||||||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattag 3966510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 6471889 - 6471941
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| |||| | || ||||| |||||||||||||||||||||||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 7677764 - 7677712
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||| || || || |||||||||||||||| ||||||||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattag 7677712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 17123165 - 17123055
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||||||||||||||  | |||  |||| || |||||||| |||||||||  | || ||  | |  |||||||||||||    
T  17123165 tatgaagcacggacactcctcggattaggcgtgtcc-cgtgtc-ggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgatttt 17123068  T
Q  405 ctcaaattattag 417  Q
    |||||||||||||    
T  17123067 ctcaaattattag 17123055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 17925167 - 17925223
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||| |||||||||||| | |  |||||||||||||||||||||||| |||||||||    
T  17925167 gtgttcgacaccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 21351906 - 21351958
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||| ||||| |||||||||||| ||| || ||||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagt 21351958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 10298668 - 10298633
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  10298668 tatgaagcacggacactcctcggattaggcgtgtcc 10298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 14674323 - 14674276
Alignment:
Q  370 ccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| ||||| | |||||||||||||| ||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattag 14674276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 417
Target Start/End: Original strand, 17177012 - 17177075
Alignment:
Q  354 cgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||  ||||||||||||||| ||||| |||||| | ||||||| ||||||||||||    
T  17177012 cgtgttgtgtctaacaccgacacttgtaattacaatgaattttttgattttttcaaattattag 17177075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 21814390 - 21814320
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||| ||| |||| |||| ||||||||||  | | | ||||||||||||||||||||||||||||    
T  21814390 tatgaagcacgaacattccttggataaggcgtgtccccgtg-ccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 22423765 - 22423800
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  22423765 tatgaagcacggacactcctcggattaggcgtgtcc 22423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 32766873 - 32766943
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||||||||||  |||||| ||| |||||| |||  |||||||||||| | ||||||||||||    
T  32766873 tatgaagcacggacactcctcagattagacgtatcctggtgtc-ggacacgtgtcgttttcgacaccgacac 32766943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 35017161 - 35017126
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  35017161 tatgaagcacggacactcctcggattaggcgtgtcc 35017126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 39695952 - 39695987
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||| |||||||||||||||||||||||||    
T  39695952 tatgaagcaccgacactcctaggattaggcgtgtcc 39695987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 11596473 - 11596506
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  11596473 ttacattgaattatgtcattttctcaaattatta 11596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 18592200 - 18592132
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||| | | ||||| ||||||| |  |||| ||||||||| |||||||||||||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtca-gacacgtgttgtgtccgacaccgacac 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 18607115 - 18607148
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  18607115 ttacattgaattatgttattttctcaaattatta 18607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 21542089 - 21542036
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| ||||| |||||||||| || || | |||||||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagt 21542036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 30135372 - 30135319
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtga-ttttctcaaattattagt 418  Q
    |||||||||||||||| ||||| ||| |||||||| |||| |||||||||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagt 30135319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 7218271 - 7218319
Alignment:
Q  369 accgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||| ||||| |||||||||||||||  | ||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattag 7218319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 376
Target Start/End: Complemental strand, 15382592 - 15382533
Alignment:
Q  316 gacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||| ||||||||||||||| || |||  |||| ||||||||||| ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtc-ggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 21522809 - 21522757
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||| ||||| ||||| |||||||||| ||||| | ||||||||||    
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattag 21522757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 21533375 - 21533323
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||| ||||| ||||| |||||||||| ||||| | ||||||||||    
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattag 21533323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 24906253 - 24906289
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcct 341  Q
    |||||||||||||||||||| | ||||||||||||||    
T  24906253 tatgaagcacggacactcctcgaattaggcgtgtcct 24906289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 416
Target Start/End: Complemental strand, 28296368 - 28296336
Alignment:
Q  384 tacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||| |||||||||||||||||    
T  28296368 tacattgaattatgtcattttctcaaattatta 28296336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 36838602 - 36838550
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || ||||| | |||||||| ||||||||||||||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattattag 36838550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 41091257 - 41091309
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||| | || ||||| ||||||||||||||||||||||| |||||    
T  41091257 cgacatcgacacatataattacactgaattatgtgattttctcaaatcattag 41091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 41633794 - 41633742
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||| ||||| ||||| |||||||||| | ||| ||||||||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattag 41633742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 4e-33; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 21880270 - 21880159
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||| || |||||||||||||||||| |||  |||| ||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  21880270 tatgaagcacggacacttctcggattaggcgtgtcctggtgtcg-gacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 21880172  T
Q  405 ctcaaattattag 417  Q
    |||||||||||||    
T  21880171 ctcaaattattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 5409772 - 5409888
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgac-----accgacacttgtagttacattgaattatgtg 399  Q
    |||||||||||||||||||| ||||||||||||||| || |||  |||||||||||||||||||     ||||||||||||| || || |||||||||||    
T  5409772 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcg-gacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtg 5409870  T
Q  400 attttctcaaattattag 417  Q
    ||||| ||||||||||||    
T  5409871 attttttcaaattattag 5409888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 598326 - 598215
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||| || ||||||||||||||| || |||  ||||||||||||||| |||||||||||||  | ||||||| ||||| ||||||||    
T  598326 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcg-gacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgatttt 598228  T
Q  405 ctcaaattattag 417  Q
    || ||||||||||    
T  598227 cttaaattattag 598215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 43027405 - 43027521
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtc-----cgacaccgacacttgtagttacattgaattatgtg 399  Q
    |||||||||||||||||| | ||||||||||||||| || |||  |||||||||||||||     ||||||||||||||||| ||||| || ||||||||    
T  43027405 tatgaagcacggacactcatcggattaggcgtgtcccggtgtcg-gacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtg 43027503  T
Q  400 attttctcaaattattag 417  Q
    ||||| ||||||||||||    
T  43027504 attttttcaaattattag 43027521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 32287404 - 32287515
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||||||| |||||| || |||  ||||| |||| |||||||||||||||| | || || || ||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcg-gacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgatttt 32287502  T
Q  405 ctcaaattattag 417  Q
    |||| ||||||||    
T  32287503 ctcagattattag 32287515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 305 - 414
Target Start/End: Complemental strand, 9778623 - 9778510
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac-----cgacacttgtagttacattgaattatgtg 399  Q
    |||||||||||||||||||| ||||||||||||||| || |||  ||||||||| |||||||||||     ||||||||||| ||| | |||||||||||    
T  9778623 tatgaagcacggacactccttggattaggcgtgtcccggtgtcg-gacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtg 9778525  T
Q  400 attttctcaaattat 414  Q
    ||||| |||||||||    
T  9778524 attttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 15680927 - 15680816
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| | ||||| ||||||  || |||  ||||||||||||||||||||||||||||| || ||||| | ||||||||||||||    
T  15680927 tatgaagcacggacactcctcgaattagacgtgtctcggtgtcg-gacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 15680829  T
Q  405 ctcaaattattag 417  Q
     |  |||||||||    
T  15680828 ttttaattattag 15680816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 20549909 - 20549798
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||| ||||||| ||||||||||||||     |||  |||| |||| ||||||||||||||||| | || ||||| ||||||| ||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcg-gacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgatttt 20549811  T
Q  405 ctcaaattattag 417  Q
    |||||||||||||    
T  20549810 ctcaaattattag 20549798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 21864926 - 21864828
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||| ||||||||| | ||||| ||||||| || |||  |||||||||||||||||||| ||||||||||| ||||| | |||||| |||||||    
T  21864926 tatgaagcacagacactcctcgaattagacgtgtcccggtgtcg-gacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgatttt 21864828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 25481968 - 25481909
Alignment:
Q  358 tcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||    
T  25481968 tcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattag 25481909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 416
Target Start/End: Complemental strand, 7438764 - 7438714
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 24339771 - 24339649
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac-----------ttgtagttacattgaat 393  Q
    |||||||||||| ||||||| ||||||||||||||| || |||  || ||||||||||||||||||||||||           ||||| ||||| |||||    
T  24339771 tatgaagcacgggcactcctcggattaggcgtgtcccggtgtcg-gatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 24339673  T
Q  394 tatgtgattttctcaaattattag 417  Q
    ||||||||||| ||||||||||||    
T  24339672 tatgtgattttttcaaattattag 24339649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 27945100 - 27945047
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagt 27945047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 28155634 - 28155577
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||| |||||  ||||||||| ||||||||||||||||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattag 28155577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 8234220 - 8234152
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||| |||||||||||||||||| ||||||||  |||| |||||||||| ||||| |||||||||||||    
T  8234220 gacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagt 8234152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 357 - 417
Target Start/End: Complemental strand, 19213870 - 19213810
Alignment:
Q  357 gtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||| | ||||||||||    
T  19213870 gtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattag 19213810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 32093955 - 32094074
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcct-ggagtcaagacacgtgtcgtgtccgac-----accgacacttgtagttacattgaattatgt 398  Q
    ||||||||||| |||||||| |||||||||||||||  || |||  |||||||||||||||||||     ||||||| ||||| ||||| ||||||||||    
T  32093955 tatgaagcacgaacactcctcggattaggcgtgtccccggtgtcg-gacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgt 32094053  T
Q  399 ga-ttttctcaaattattagt 418  Q
    || |||| |||||||||||||    
T  32094054 gatttttttcaaattattagt 32094074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 7197282 - 7197349
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||  ||||||| | ||||||||||    
T  7197282 gacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattag 7197349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 417
Target Start/End: Complemental strand, 1401093 - 1401032
Alignment:
Q  356 tgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||| |||||||| |||| || ||||| |||||||||||| ||||||||||||||||    
T  1401093 tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattag 1401032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 3991383 - 3991330
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| ||| | |||||||||||||||| |||||||||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagt 3991330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 417
Target Start/End: Complemental strand, 13770810 - 13770698
Alignment:
Q  309 aagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac-----cgacacttgtagttacattgaattatgtgattt 403  Q
    |||||||||||||| | ||||||||||||| | || |||  ||||||||| |||||||||||     ||||||||||| ||||| |||||||||| ||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcg-gacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaattt 13770712  T
Q  404 tctcaaattattag 417  Q
    | | ||||||||||    
T  13770711 ttttaaattattag 13770698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 406
Target Start/End: Original strand, 18212974 - 18213074
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||| ||||||||| |||| ||||||||||  | |||| || | | |||||||||||||||||||| | || ||||| | ||||||||||||||    
T  18212974 tatgaagcacagacactcctcggataaggcgtgtccccgtgtca-gaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T
Q  405 ct 406  Q
    ||    
T  18213073 ct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 33994330 - 33994218
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||| |||| |||||||| ||||||||||||||  || ||   |||| |||||||||| |||||||||||||||| || || ||||||||||||  ||    
T  33994330 tatgaaacacgaacactccttggattaggcgtgtctcggtgttg-gacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgacctt 33994232  T
Q  405 ctcaaattattagt 418  Q
     |||||||| ||||    
T  33994231 ttcaaattagtagt 33994218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 1433577 - 1433462
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtc-----cgacaccgacacttgtagttacattgaattatgtg 399  Q
    |||||||||||||||||||| ||||||| |||||||||| |||  ||||| |||| ||||     |||||||||||| | || |||||   ||| |||||    
T  1433577 tatgaagcacggacactcctcggattagacgtgtcctggtgtc-ggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtg 1433479  T
Q  400 attttctcaaattatta 416  Q
    |||||||||||||||||    
T  1433478 attttctcaaattatta 1433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 19992060 - 19992008
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||| || ||||| |||| ||||||||||||||||||||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattag 19992008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 24105796 - 24105685
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||  |||||||| || |||||||||||| || |||  ||||| ||| ||| ||||| |||||||||||| ||||| ||||| |||  |||||    
T  24105796 tatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcg-gacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaatttt 24105698  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  24105697 ttcaaattattag 24105685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 26033465 - 26033513
Alignment:
Q  369 accgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 417
Target Start/End: Complemental strand, 26733371 - 26733311
Alignment:
Q  357 gtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||| | || ||| | |||||||||||||||| ||||||||||||    
T  26733371 gtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattag 26733311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 9408334 - 9408385
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 414
Target Start/End: Complemental strand, 9483003 - 9482944
Alignment:
Q  355 gtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    |||||| ||||||||||||||| | || ||||| |||||| |||||||||||||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 25956511 - 25956464
Alignment:
Q  358 tcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||    
T  25956511 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttc 25956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 3721158 - 3721100
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||| | || ||| | | |||||||||||||||||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattag 3721100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 11061070 - 11061128
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||| |||||||||||||||| ||| | | |||||||||||||| ||||||||||||    
T  11061070 cgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattag 11061128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 416
Target Start/End: Complemental strand, 12278943 - 12278843
Alignment:
Q  315 ggacactcctaggattaggcgtgtcctggagtcaagacacgtg-tcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatta 413  Q
    ||||||||||||||||||| |||||| || ||| ||||||| | | |||||||||| |||||| | || ||||| |||||||||| ||||||| ||||||    
T  12278943 ggacactcctaggattaggtgtgtcccggtgtc-agacacgcgttggtgtccgaca-cgacacatataattacactgaattatgtcattttcttaaatta 12278846  T
Q  414 tta 416  Q
    |||    
T  12278845 tta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 29763130 - 29763187
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgt 363  Q
    |||||||||||||||||||| |||||||||||||||||  |||  ||||||||||||||    
T  29763130 tatgaagcacggacactcctcggattaggcgtgtcctgatgtc-ggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 418
Target Start/End: Complemental strand, 5835322 - 5835253
Alignment:
Q  349 agacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||| |||| |||| ||||||||||| | || ||||| |||||||||| ||||||||||| |||||||    
T  5835322 agacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagt 5835253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 35862023 - 35861970
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||| |||||||  | |||||||||||||||||||||| |||||||||||||    
T  35862023 cgacacagacacttacaattacattgaattatgtgattttttcaaattattagt 35861970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 5937414 - 5937466
Alignment:
Q  358 tcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    ||||| ||||||| |||||||||  |||||||||||||||| |||||||||||    
T  5937414 tcgtgaccgacacagacacttgtgattacattgaattatgtcattttctcaaa 5937466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 18039058 - 18039006
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtga-ttttctcaaattatta 416  Q
    ||||||||||||||||| ||||| |||||||||||| |||| |||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 18215186 - 18215238
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||  |||| || ||||||||||||| ||||||||||||    
T  18215186 cgacaccgacacttgtaactacactgcattatgtgattttttcaaattattag 18215238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 417
Target Start/End: Complemental strand, 24146879 - 24146823
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| ||||||||||| | || ||| |||||||||||||||||||| ||||||||||    
T  24146879 tgtcagacaccgacacatataattatattgaattatgtgattttctaaaattattag 24146823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 35862069 - 35862033
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcct 341  Q
    |||||||||||||||||||| ||||||||||||||||    
T  35862069 tatgaagcacggacactcctcggattaggcgtgtcct 35862033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 414
Target Start/End: Original strand, 3554496 - 3554555
Alignment:
Q  355 gtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    |||||||||||||||||||||  | || ||||||| |||||||| ||||||| |||||||    
T  3554496 gtgtcgtgtccgacaccgacatctataattacattaaattatgtaattttcttaaattat 3554555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Complemental strand, 19206108 - 19206057
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||| | || ||| | |||||||||||||||||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattag 19206057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 404
Target Start/End: Complemental strand, 21560562 - 21560523
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtgatttt 21560523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 23191969 - 23191903
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||| |||||| ||||| || || |||| ||||| |||| ||||||||||||||||||||||||    
T  23191969 gacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 23191903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 2424655 - 2424621
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||||||||||||||||||||||||||    
T  2424655 ttacactgaattatgtgattttctcaaattattag 2424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 415
Target Start/End: Original strand, 12843175 - 12843225
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatt 415  Q
    |||||| ||||| |||| |||||||||||||||| ||||| ||||||||||    
T  12843175 cgacactgacacatgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 411
Target Start/End: Original strand, 22602710 - 22602756
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaat 411  Q
    |||||||||||| | || ||||| |||||||||||||||||||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 417
Target Start/End: Original strand, 27093364 - 27093465
Alignment:
Q  315 ggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    |||||||| | |||||||| ||||||| | |||  ||||| |||||||||  |||||||| | | || ||||| | |||||||||||||||| |||||||    
T  27093364 ggacactcatcggattaggtgtgtcctagtgtcg-gacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattat 27093462  T
Q  415 tag 417  Q
    |||    
T  27093463 tag 27093465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 417
Target Start/End: Complemental strand, 27184937 - 27184836
Alignment:
Q  315 ggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    |||||||| | |||||||| ||||||| | |||  ||||| |||||||||  |||||||| | | || ||||| | |||||||||||||||| |||||||    
T  27184937 ggacactcatcggattaggtgtgtcctagtgtcg-gacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattat 27184839  T
Q  415 tag 417  Q
    |||    
T  27184838 tag 27184836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 28155672 - 28155634
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctgg 343  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  28155672 tatgaagcacggacattccttggattaggcgtgtcctgg 28155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 417
Target Start/End: Original strand, 29787387 - 29787421
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||||||||||||||||||||||||||    
T  29787387 ttacactgaattatgtgattttctcaaattattag 29787421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 32308161 - 32308127
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||||||||||||||||||||||||||    
T  32308161 ttacactgaattatgtgattttctcaaattattag 32308127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 417
Target Start/End: Original strand, 42720876 - 42720942
Alignment:
Q  351 acacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| ||| ||||| ||||| ||||| | || ||||||| |||||||||||||| ||||||||||||    
T  42720876 acacatgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattag 42720942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 1885632 - 1885587
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    ||||||||||||||||  |||||||||||||||| ||||| |||||    
T  1885632 cgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 7058485 - 7058432
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||| ||||||||| ||||| |||||||  ||||||| |||||||||||||    
T  7058485 cgacaccaacacttgtaattacactgaattacatgattttttcaaattattagt 7058432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 8842282 - 8842315
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||| |||||||||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcc 8842315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 11700844 - 11700811
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||||||| |||||||||||    
T  11700844 ttacattgaattatgtgattttgtcaaattatta 11700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 338
Target Start/End: Complemental strand, 30813915 - 30813882
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgt 338  Q
    |||||||||||||||||||| |||||||||||||    
T  30813915 tatgaagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 38134424 - 38134457
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  38134424 ttacattgaattatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 39138519 - 39138462
Alignment:
Q  349 agacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttct 406  Q
    ||||| || ||||||||||||||||||  | || ||||| ||||||||||||||||||    
T  39138519 agacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 44172908 - 44172941
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  44172908 ttacattgaattatgtcattttctcaaattatta 44172941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 2425736 - 2425784
Alignment:
Q  368 caccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||| | ||||| || | ||||||||||||||||||||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattatta 2425784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 3520345 - 3520393
Alignment:
Q  368 caccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||| | || |||||||||||||| |||||||||||||| ||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgatta 3520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 4909215 - 4909159
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||| ||||| | |  ||||| |||||||||| |||||||||||||||||    
T  4909215 gtgtccgacactgacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 5307374 - 5307338
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcct 341  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  5307374 tatgaagcacgtacactccttggattaggcgtgtcct 5307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 6490839 - 6490799
Alignment:
Q  300 caaattatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||| |||||||||||||||||||| |||||| ||||||||    
T  6490839 caaactatgaagcacggacactcctcggattaagcgtgtcc 6490799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 7328691 - 7328743
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || ||||| | |||||||| ||||||||||||||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattag 7328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 7438835 - 7438799
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcct 341  Q
    |||||||||||||||||||| | ||||||||||||||    
T  7438835 tatgaagcacggacactccttgaattaggcgtgtcct 7438799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 414
Target Start/End: Original strand, 11272586 - 11272637
Alignment:
Q  365 cgacaccgacacttgtagttacattgaat--tatgtgattttctcaaattat 414  Q
    ||||||||||||||||| ||||| |||||  ||||||||||| |||||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 11665441 - 11665493
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||| |||||||| || ||| | |||||||||||||||| |||||||||||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagt 11665493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 417
Target Start/End: Complemental strand, 12289149 - 12289121
Alignment:
Q  389 tgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||||||||||    
T  12289149 tgaattatgtgattttctcaaattattag 12289121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 13300468 - 13300416
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||| ||| ||| ||||| |||||||| ||||||| |||||||||||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattagt 13300416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 417
Target Start/End: Original strand, 14077383 - 14077486
Alignment:
Q  313 acggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatt 412  Q
    |||||||||||| || | ||||||||||||| |||  |||| | ||||||||  || ||||||||| || ||| ||| |||||||| ||||| ||||||     
T  14077383 acggacactcctcggttaaggcgtgtcctggtgtc-ggacatgcgtcgtgtctaactccgacacttataattatattaaattatgttattttttcaaata 14077481  T
Q  413 attag 417  Q
    |||||    
T  14077482 attag 14077486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 417
Target Start/End: Original strand, 14387411 - 14387514
Alignment:
Q  313 acggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatt 412  Q
    |||||||||||| || | ||||||||||||| |||  |||| | ||||||||  || ||||||||| || ||| ||| |||||||| ||||| ||||||     
T  14387411 acggacactcctcggttaaggcgtgtcctggtgtc-ggacatgcgtcgtgtctaactccgacacttataattatattaaattatgttattttttcaaata 14387509  T
Q  413 attag 417  Q
    |||||    
T  14387510 attag 14387514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 25822784 - 25822717
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccga 373  Q
    |||||| |||||||||||||  |||||||| ||||| |  |||| |||||||||||||||||| |||||    
T  25822784 tatgaaacacggacactccttagattaggcatgtcccgatgtca-gacacgtgtcgtgtccgataccga 25822717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 30731078 - 30731046
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatt 415  Q
    ||||| |||||||||||||||||||||||||||    
T  30731078 ttacactgaattatgtgattttctcaaattatt 30731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 30813863 - 30813819
Alignment:
Q  373 acacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| |||| ||||| |||||||||| ||||||||||||||||||    
T  30813863 acacctgtaattacactgaattatgtaattttctcaaattattag 30813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 38143287 - 38143231
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||| |||||| |||| | || ||||||| |||||||||||||| |||||||||||    
T  38143287 gtgtctgacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 413
Target Start/End: Complemental strand, 41360953 - 41360921
Alignment:
Q  381 agttacattgaattatgtgattttctcaaatta 413  Q
    |||||||||||||||||| ||||||||||||||    
T  41360953 agttacattgaattatgttattttctcaaatta 41360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 417
Target Start/End: Original strand, 45056925 - 45056953
Alignment:
Q  389 tgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||||||||||    
T  45056925 tgaattatgtgattttctcaaattattag 45056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 4e-33; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 23292927 - 23293038
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| ||||||||||||||| || |||  |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  23292927 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcg-gacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgatttt 23293025  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  23293026 ttcaaattattag 23293038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 24613631 - 24613754
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtc-----------cgacaccgacacttgtagttacattgaat 393  Q
    |||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||            |||||||||||||||| |||||||||||    
T  24613631 tatgaagcacggacactcctaggattagacgtgtcctggtgtc-agacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaat 24613729  T
Q  394 tatgtgattttctcaaattattagt 418  Q
    |||||||||||||||||||||||||    
T  24613730 tatgtgattttctcaaattattagt 24613754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 28964189 - 28964300
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||| |||||||||| |||||||||||||||  | |||  || | |||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  28964189 tatgaagcatggacactcctcggattaggcgtgtcccagtgtcg-gatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgatttt 28964287  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  28964288 ttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 303 - 417
Target Start/End: Original strand, 3947700 - 3947818
Alignment:
Q  303 attatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacacc-----gacacttgtagttacattgaattatg 397  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||  |||||||||||||||||||||      |||||||||| ||||| |||||||||    
T  3947700 attatgaagcacggacactcctcggattaggtgtgtcctggtgtcg-gacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatg 3947798  T
Q  398 tgattttctcaaattattag 417  Q
     |||||| ||||||||||||    
T  3947799 cgattttttcaaattattag 3947818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 8423659 - 8423770
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||| ||||||||||| ||  |||||||||||||| || |||  ||||  |||||||||||||||||||| || || ||||| ||||||||||||||||    
T  8423659 tatgacgcacggacacttctccgattaggcgtgtcccggtgtcg-gacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgatttt 8423757  T
Q  405 ctcaaattattag 417  Q
    |||||||||||||    
T  8423758 ctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 54580008 - 54580076
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagt 54580076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 16073512 - 16073403
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||| |||||||||| |||||||||||||| | | |||  |||| || |||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  16073512 tatgaagcatggacactcctcggattaggcgtgtcttagtgtcg-gacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt 16073414  T
Q  405 ctcaaattatta 416  Q
     |||||||||||    
T  16073413 -tcaaattatta 16073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 418
Target Start/End: Original strand, 12797282 - 12797390
Alignment:
Q  308 gaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctc 407  Q
    |||||||| ||| |||| ||||||| | ||||| || |||| |||| || |||||||||||||||||||||||| ||||| |||||||||||||||| ||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtca-gacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tc 12797379  T
Q  408 aaattattagt 418  Q
    |||||||||||    
T  12797380 aaattattagt 12797390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 417
Target Start/End: Complemental strand, 49431140 - 49431032
Alignment:
Q  309 aagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga-ttttctc 407  Q
    ||||| |||||||||| |||| |||||||||| || ||   ||||||||||||||||||||||||||||| || ||||| |||||||||||| |||| ||    
T  49431140 aagcatggacactcctcggataaggcgtgtcccggtgttg-gacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttc 49431042  T
Q  408 aaattattag 417  Q
    ||||||||||    
T  49431041 aaattattag 49431032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 2361916 - 2362027
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||| |  ||||||| |||||  || |||| |||||| |||||||||||||||||||||| || ||||| | |||||||| |||||    
T  2361916 tatgaagcacggacactcgtcagattaggtgtgtctcggtgtca-gacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaatttt 2362014  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  2362015 ttcaaattattag 2362027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 12895215 - 12895325
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||| |||||||| ||||||||||||||| |  |||  || || ||||||||||||||||||||||| || |||||   ||||||||||||||    
T  12895215 tatgaagcacgaacactcctcggattaggcgtgtcccgatgtcg-gatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T
Q  405 ctcaaattatta 416  Q
     |||||||||||    
T  12895314 ttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 29205518 - 29205451
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  29205518 gacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 417
Target Start/End: Complemental strand, 21945610 - 21945510
Alignment:
Q  316 gacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatt 415  Q
    ||||||||| |||||||||||||   || |||  |||| ||||| ||||||||||||||||||||| ||||| |||||||||| ||||| ||||||||||    
T  21945610 gacactcctcggattaggcgtgttgcggtgtcg-gacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 21945512  T
Q  416 ag 417  Q
    ||    
T  21945511 ag 21945510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 34306745 - 34306856
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||| ||| ||||  |||||||||||||  || |||  |||||||||||||||||||||||||||||||| ||||| |  ||||| |||||||    
T  34306745 tatgaagcacgaacattcctcagattaggcgtgtctcggtgtcg-gacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgatttt 34306843  T
Q  405 ctcaaattattagt 418  Q
     |||||||||||||    
T  34306844 -tcaaattattagt 34306856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 13307951 - 13307891
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||    
T  13307951 gacacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcattttctcaaa 13307891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 42640642 - 42640549
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||| |||||| |||||||||||||||||| | |  ||||||||||     ||||||||||||||||| ||||| ||||||||||||||||    
T  42640642 tatgaagcacggaaactcctcggattaggcgtgtcctggtgccg-gacacgtgtc-----cgacaccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 404
Target Start/End: Original strand, 715546 - 715646
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtcc--gacaccgacacttgtagttacattgaattatgtgatt 402  Q
    |||||||||||||||||||| |||||||||||||||  | |||  |||| ||||||||| |  |||||| ||||||||| ||||| ||||||||||||||    
T  715546 tatgaagcacggacactcctcggattaggcgtgtccctgtgtc-ggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 715644  T
Q  403 tt 404  Q
    ||    
T  715645 tt 715646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 404
Target Start/End: Original strand, 752872 - 752972
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtcc--gacaccgacacttgtagttacattgaattatgtgatt 402  Q
    |||||||||||||||||||| |||||||||||||||  | |||  |||| ||||||||| |  |||||| ||||||||| ||||| ||||||||||||||    
T  752872 tatgaagcacggacactcctcggattaggcgtgtccctgtgtc-ggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 752970  T
Q  403 tt 404  Q
    ||    
T  752971 tt 752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 35157926 - 35158038
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||| || |||||| |||||| | || ||   |||| |||||||||| ||||||||||||| || ||||| | ||||||||||||||    
T  35157926 tatgaagcacggacacttctcggattaagcgtgttccggtgttg-gacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttt 35158024  T
Q  405 ctcaaattattagt 418  Q
      ||||||||||||    
T  35158025 tccaaattattagt 35158038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 4157223 - 4157156
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||| ||||||||||||||||||||||||||| || || | |||||||||||||| |||||||||||||    
T  4157223 gacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt-tcaaattattagt 4157156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 12895116 - 12895168
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattag 12895168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 30982808 - 30982878
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||| | ||||||||||||||| || |||  ||||||||||||||| |||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtc-ggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 36635448 - 36635330
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac-----cga-cacttgtagttacattgaattatgt 398  Q
    |||||||||||||||||| | ||||||||||||||| || |||  ||| ||||||||||| |||||     ||| ||| | || ||||| ||||||||||    
T  36635448 tatgaagcacggacactcttcggattaggcgtgtcccggtgtct-gacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgt 36635350  T
Q  399 gattttctcaaattattagt 418  Q
    ||||||||||||||||||||    
T  36635349 gattttctcaaattattagt 36635330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 38846997 - 38847064
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||| || ||||||| ||||||||||||    
T  38846997 gacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattag 38847064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 326 - 416
Target Start/End: Original strand, 40179598 - 40179687
Alignment:
Q  326 ggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||| ||| ||| | ||| |||||||||||||||||||| | | || ||||| |||||||||||||||| ||||| |||||    
T  40179598 ggattaggcgtgtcatggtgtcga-acatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 35161154 - 35161054
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||  | |||||||| |||| | || |||  ||||||||||||||||||| | || |||| || ||||| ||||||||||||||||    
T  35161154 tatgaagcacggacacttttcggattaggtgtgttccggtgtcg-gacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgatttt 35161056  T
Q  405 ct 406  Q
    ||    
T  35161055 ct 35161054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 11596352 - 11596404
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 11596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 417
Target Start/End: Complemental strand, 848009 - 847958
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||| ||| | |||||||||| ||||||||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattag 847958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 5414102 - 5414172
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||||| |||| ||| ||||||  | ||| |||||||||||||||||||||| |||||    
T  5414102 tatgaagcacggacactccttggataaggtgtgtccctgtgtc-agacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 404
Target Start/End: Complemental strand, 28084640 - 28084542
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgt-gtc-cgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||| |||||||||||||||  | |||  ||||||||||   | | |||||| |||||||||| ||||||||||||||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcg-gacacgtgtcaccgacacgacacagacacttgtaattacattgaattatgtgatttt 28084542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 4157510 - 4157456
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||| ||||||||||||||||||||||||||| || || | ||||||||||||||    
T  4157510 gacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||| ||||| | |||||||||||||| |||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 6879459 - 6879504
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||    
T  6879459 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttt 6879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 12077869 - 12077836
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||||||||||||||||||    
T  12077869 ttacattgaattatgtgattttctcaaattatta 12077836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 18513176 - 18513292
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtc-gtgtccg-----acaccgacacttgtagttacattgaattatgt 398  Q
    ||||||||||||||||||||  ||||||||||||||||| |||  |||||  ||| |||||||     |||| ||||| | |  ||||||||||||||||    
T  18513176 tatgaagcacggacactcctcagattaggcgtgtcctggtgtc-ggacacacgtcggtgtccgacacaacactgacacatatgattacattgaattatgt 18513274  T
Q  399 gattttctcaaattatta 416  Q
     |||||||||||||||||    
T  18513275 cattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 33950200 - 33950143
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| ||||||||||| | |  ||||||| |||||||||||||||||||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattag 33950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 40481715 - 40481643
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgaca-----cttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||| |||||||||     |||||| ||||| |||||||||||||||| |||||||||||||    
T  40481715 gacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtgatttt-tcaaattattagt 40481643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 44362737 - 44362680
Alignment:
Q  353 acgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    |||||||||||| |||||| ||||||||  ||||||| |||||||| |||||||||||    
T  44362737 acgtgtcgtgtctgacaccaacacttgtgattacattaaattatgtcattttctcaaa 44362680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 4672026 - 4672137
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||| ||||||||| ||||||| | ||| |  | ||| | |||||| | || |||||||||||||| | ||| |||| |||||||||| |||||    
T  4672026 tatgaagcacagacactccttggattagacatgttccagtgtcga-acacgttttgtatccgacaccgacacatatagctacactgaattatgtaatttt 4672124  T
Q  405 ctcaaattattag 417  Q
    | |||||||||||    
T  4672125 cccaaattattag 4672137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 7214523 - 7214575
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||| | | || ||||||| ||||||||||||||||||||||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattattagt 7214575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 30838340 - 30838269
Alignment:
Q  304 ttatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||| |||||||||||||||| || ||||||||||| ||| |||  ||||||||||| ||||||||| |||||    
T  30838340 ttattaagcacggacactcctcgggttaggcgtgtcttggtgtc-ggacacgtgtcgcgtccgacactgacac 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 414
Target Start/End: Complemental strand, 2234291 - 2234260
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattat 414  Q
    ||||||||||||||||||||||||||||||||    
T  2234291 ttacattgaattatgtgattttctcaaattat 2234260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 4383484 - 4383449
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 5775305 - 5775340
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  5775305 tatgaagcacggacactcctcggattaggcgtgtcc 5775340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Complemental strand, 13117493 - 13117446
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctc 407  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||||    
T  13117493 gtgtccgacaccgacacttgtgattacattgaattttgtcattttctc 13117446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 14465088 - 14465127
Alignment:
Q  378 tgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattag 14465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 22234820 - 22234890
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||| ||||| || |||||||  ||||||||| |||  ||||||||||||||| |||||||||||    
T  22234820 tatgaagcacgaacacttctcggattagctgtgtcctggtgtcg-gacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 22440559 - 22440594
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcct 341  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcct 22440594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 23861370 - 23861483
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtag--ttacattgaattatgtgatt 402  Q
    ||||||||||| |||||| | | |||||||||||| ||| | || |||| ||||||| || ||||||||||| | ||   ||||||||||| ||||||||    
T  23861370 tatgaagcacgaacactctttgaattaggcgtgtcttggtgaca-gacatgtgtcgtatctgacaccgacacatatataattacattgaatcatgtgatt 23861468  T
Q  403 ttctcaaattattag 417  Q
    || |||| |||||||    
T  23861469 ttatcaatttattag 23861483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 410
Target Start/End: Complemental strand, 37496761 - 37496718
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    ||||||||||||||  |||||||||||||||| |||||||||||    
T  37496761 acaccgacacttgtgattacattgaattatgtcattttctcaaa 37496718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 3064869 - 3064903
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtc 339  Q
    |||||||||||||||||||| ||||||||||||||    
T  3064869 tatgaagcacggacactcctcggattaggcgtgtc 3064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 416
Target Start/End: Original strand, 5775359 - 5775409
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||| | || ||||| | ||||||||||||||||||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 415
Target Start/End: Original strand, 30103298 - 30103406
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||  ||||||||| |||||||  ||||||||  |||| ||||  ||||||||  ||||||||||| | |  ||||| | ||||||||||||||    
T  30103298 tatgaagcagagacactcctcggattagatgtgtcctgatgtca-gacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgatttt 30103395  T
Q  405 ctcaaattatt 415  Q
    |||||||||||    
T  30103396 ctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 417
Target Start/End: Original strand, 34200293 - 34200323
Alignment:
Q  387 attgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||||||||||||    
T  34200293 attgaattatgtgattttctcaaattattag 34200323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 903963 - 903930
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    ||||| ||||||||||||||||||||||||||||    
T  903963 ttacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 4383426 - 4383374
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||| |||| ||||| ||||| |||||||||||||||| |||||||||||||    
T  4383426 cgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagt 4383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 5654609 - 5654642
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  5654609 ttacattgaattatgtcattttctcaaattatta 5654642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 9996914 - 9996849
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatt 415  Q
    |||||||||  |||| |||||||| || | || ||| | |||||||||||||||||||||||||||    
T  9996914 gacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 10546189 - 10546156
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  10546189 ttacattgaattatgtcattttctcaaattatta 10546156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 16189773 - 16189716
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| |||||||||   || ||||| |||||||||||||||||||||||| ||||    
T  16189773 gtgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatttttag 16189716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 19230327 - 19230360
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  19230327 ttacattgaattatgttattttctcaaattatta 19230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 19482727 - 19482674
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||| ||||||||| |||||  |||||||||||| || |||||||||||||    
T  19482727 cgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagt 19482674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 22440618 - 22440651
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    ||||| ||||||||||||||||||||||||||||    
T  22440618 ttacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 30299006 - 30298953
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtga-ttttctcaaattattag 417  Q
    ||||||||||||||||| ||||| |||||||||| | |||| ||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattag 30298953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 30327874 - 30327821
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtga-ttttctcaaattattag 417  Q
    ||||||||||||||||| ||||| |||||||||| | |||| ||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattag 30327821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 30522930 - 30522967
Alignment:
Q  380 tagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  30522930 tagttacactgaattatgtgattttctcaaataattag 30522967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 31800469 - 31800530
Alignment:
Q  356 tgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||| ||| ||||||||||||| ||||||| |||||| | ||||| | ||||||||||    
T  31800469 tgtcgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattag 31800530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 35723384 - 35723437
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtg-attttctcaaattattag 417  Q
    |||||| ||||| | || ||||||||||||||||| ||||||||||||||||||    
T  35723384 cgacactgacacatataattacattgaattatgtgtattttctcaaattattag 35723437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 43299989 - 43300022
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  43299989 ttacattgaattatgtaattttctcaaattatta 43300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 43300657 - 43300624
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  43300657 ttacattgaattatgtaattttctcaaattatta 43300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 44796975 - 44797012
Alignment:
Q  378 tgtagttacattgaattatgtgattttctcaaattatt 415  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  44796975 tgtaattacattgaattatgttattttctcaaattatt 44797012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 11651142 - 11651186
Alignment:
Q  373 acacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| || |||||||||||||||| | ||||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattag 11651186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 17425348 - 17425384
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcct 341  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtcct 17425384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 415
Target Start/End: Original strand, 18844483 - 18844523
Alignment:
Q  375 acttgtagttacattgaattatgtgattttctcaaattatt 415  Q
    |||| |||||||||||| |||||||||||| ||||||||||    
T  18844483 acttttagttacattgagttatgtgattttttcaaattatt 18844523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 55401193 - 55401081
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| ||||||||||||||  || |||  |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  55401193 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcg-gacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 55401095  T
Q  405 ctcaaattattagt 418  Q
     |||||||||||||    
T  55401094 ttcaaattattagt 55401081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 305 - 415
Target Start/End: Complemental strand, 20503583 - 20503474
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| ||||||||||||||| || |||| |||| ||||||||||| ||||||||||||||| ||||| |||||||||| |||||    
T  20503583 tatgaagcacggacactcctcggattaggcgtgtcccggtgtca-gacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcatttt 20503485  T
Q  405 ctcaaattatt 415  Q
     ||||||||||    
T  20503484 ttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 10955073 - 10954958
Alignment:
Q  305 tatgaagcacggacact---cctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgat 401  Q
    |||||||||||||||||   ||| |||||||||||||||  | |||  |||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  10955073 tatgaagcacggacactactcctcggattaggcgtgtcccagtgtcg-gacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgat 10954975  T
Q  402 tttctcaaattattagt 418  Q
    ||| |||||||||||||    
T  10954974 tttttcaaattattagt 10954958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 306 - 417
Target Start/End: Complemental strand, 28918120 - 28918008
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtcc--gacaccgacacttgtagttacattgaattatgtgattt 403  Q
    |||||||| |||||||||| |||||||||||||||  | |||  ||||||||||||||||  |||||||||||||||| ||||| |||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcg-gacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattt 28918022  T
Q  404 tctcaaattattag 417  Q
    | ||||||||||||    
T  28918021 tttcaaattattag 28918008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 35223056 - 35222956
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||| | ||||||||  | |||| |||||||||| |||||||||||||||| | || ||||||||||||||||||||||    
T  35223056 tatgaagcacggacactcctcggataaagcgtgtccccgtgtca-gacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgatttt 35222958  T
Q  405 ct 406  Q
    ||    
T  35222957 ct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 15999951 - 16000069
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtg------tccgacaccgacacttgtagttacattgaattatgt 398  Q
    ||||| |||||||||||||| ||||||||||||||| || |||  |||||||||||||      ||||||||||||||||||||||||| ||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcg-gacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgt 16000049  T
Q  399 gattttctcaaattattagt 418  Q
     ||||| | |||||||||||    
T  16000050 tatttttttaaattattagt 16000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 416
Target Start/End: Complemental strand, 25775624 - 25775516
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatt-tt 404  Q
    |||||||||| |||||||| |||||||||||||||||| |||  ||||||   ||||||||||||||||||||||| ||||| |||||||||||||| ||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcg-gacacga--cgtgtccgacaccgacacttgtaattacactgaattatgtgattatt 25775528  T
Q  405 ctcaaattatta 416  Q
     |||||||||||    
T  25775527 ttcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 26492146 - 26492257
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||| |||||| |||| ||||||| |||||| ||| |||| |||| ||||||||||||||||||| ||||||| ||||| |||||| | |||||||    
T  26492146 tatgaagcgcggacattcctcggattagacgtgtcttggtgtca-gacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgatttt 26492244  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  26492245 ttcaaattattag 26492257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 404
Target Start/End: Original strand, 40993276 - 40993374
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||| |||||||||| ||||||||||||||| || |||  |||| |||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  40993276 tatgaagcatggacactcctcggattaggcgtgtcccggtgtcg-gacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 414
Target Start/End: Original strand, 8789489 - 8789599
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgt--cgtgtccgacaccgacacttgtagttacattgaattatgtgatt 402  Q
    |||||||||||||||||||| ||||||||||||||  || |||  |||| ||||  |||||||||||||||||| | || |||||  |||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcc-gacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgatt 8789587  T
Q  403 ttctcaaattat 414  Q
    ||||||||||||    
T  8789588 ttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 416
Target Start/End: Original strand, 24204983 - 24205092
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtc-gtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||||| | |||||||||||||||| |||  |||||| ||| |||||||||| |||||||| || ||||| || ||||||| |||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtc-ggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatgtcatttt 24205080  T
Q  405 ctcaaattatta 416  Q
    ||||||||||||    
T  24205081 ctcaaattatta 24205092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 27505369 - 27505253
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtc-----cgacaccgacacttgtagttacattgaattatgtg 399  Q
    |||||||||||||||||||| ||||||||| ||||| || |||  |||||||||||||||     ||||||||||||||||| ||||| | |||||||||    
T  27505369 tatgaagcacggacactcctcggattaggcatgtcccggtgtcg-gacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtg 27505271  T
Q  400 attttctcaaattattag 417  Q
    |||||   ||||||||||    
T  27505270 atttttaaaaattattag 27505253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 51206348 - 51206405
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattag 51206405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 8383322 - 8383264
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattag 8383264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 11252094 - 11251985
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||| ||||||||| ||||||||||||| | |  | |  ||||||||| ||||| ||||||||||| |  | ||||| ||||||||||||||||    
T  11252094 tatgaagcacagacactcctcggattaggcgtgttccgatgccg-gacacgtgttgtgtctgacaccgacacat--aattacactgaattatgtgatttt 11251998  T
Q  405 ctcaaattattag 417  Q
    |||||||||||||    
T  11251997 ctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 406
Target Start/End: Original strand, 13845466 - 13845566
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||| |||||||||   | |||| ||||||| ||||||||||||||||||| | || ||||| || ||| |||||||||    
T  13845466 tatgaagcacggacactccttggataaggcgtgtctccgtgtca-gacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T
Q  405 ct 406  Q
    ||    
T  13845565 ct 13845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 4987222 - 4987343
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccg-----------acacttgtagttacattgaatt 394  Q
    |||||| |||||||||||| ||||||||||||||| || |||  |||||||||||||||| ||||||           ||||||||| ||||| ||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtc-ggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatt 4987320  T
Q  395 atgtgattttctcaaattattag 417  Q
    |||||||||| ||||||||||||    
T  4987321 atgtgattttttcaaattattag 4987343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 317 - 413
Target Start/End: Complemental strand, 7171607 - 7171513
Alignment:
Q  317 acactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatta 413  Q
    |||||||| ||||||||||||||  || |||  |||||||||||||||||||||| ||||||||| |||||  ||||||| ||||||| ||||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcg-gacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgatttt-tcaaatta 7171513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 49651786 - 49651838
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 7928515 - 7928457
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||| | || ||||| |||||||||||||||| ||||||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattag 7928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 400
Target Start/End: Complemental strand, 3631796 - 3631708
Alignment:
Q  311 gcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga 400  Q
    |||||||||||||| ||| |||||||||||||| |||  |||| |||||||||||||||| | ||| | || ||||| ||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtc-ggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 18427067 - 18426955
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||| |||||||||||||  ||||||| |||||| || | |  |||||||||||| |||||||||||||  | || |||||  |||||||||||||||    
T  18427067 tatgaaacacggacactcctcagattaggtgtgtcccggtgccg-gacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgatttt 18426969  T
Q  405 ctcaaattattagt 418  Q
     | |||||||||||    
T  18426968 ttgaaattattagt 18426955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 417
Target Start/End: Complemental strand, 26508166 - 26508117
Alignment:
Q  368 caccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattag 26508117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 34910376 - 34910323
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||| |||||| ||||| |||||||||||||||| |||||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagt 34910323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 1509598 - 1509546
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| | |||||||||||||| ||||||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 1509546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 416
Target Start/End: Complemental strand, 5339184 - 5339116
Alignment:
Q  353 acgtgtcgtgtccgacaccga-----cacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||||||     |||||||  ||||||| ||||||||||||||||||||||||||    
T  5339184 acgtgtcgtgtccgacaccgatacgacacttgtttttacattaaattatgtgattttctcaaattatta 5339116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 8587017 - 8587069
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatta 413  Q
    ||||||||||||||||||||| ||||| | |||||||||||||| ||||||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaatta 8587069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 10335275 - 10335339
Alignment:
Q  354 cgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||| |||||||||||||||||| ||||| | || ||||||| ||| |||||||||||||    
T  10335275 cgtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagt 10335339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 14832158 - 14832106
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||| |||||||||| ||||||||| |||||||||||| ||||||||||||    
T  14832158 cgacactgacacttgtaattacattgagttatgtgattttttcaaattattag 14832106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 24633385 - 24633452
Alignment:
Q  349 agacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||| ||||||||||| |||||||||| | || ||||||||||||| ||||||||  ||||||||||    
T  24633385 agacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgatttttccaaattatta 24633452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 41961580 - 41961650
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||||||| || |||||||||||||||  | |||  |||||||||||||||||| ||||||||    
T  41961580 tatgaagcacggacacttctcggattaggcgtgtcccagtgtc-ggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 45451627 - 45451560
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| |||||||||||||||||||||| | |  ||| | |||| ||||||||||||||||||||||||    
T  45451627 gacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattag 45451560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 400
Target Start/End: Complemental strand, 3865748 - 3865698
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga 400  Q
    ||||||||||||||| |||||||||||||||| ||| | ||||||||||||    
T  3865748 gacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtga 3865698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 9624682 - 9624648
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||||||||||||||||    
T  9624682 ttacattgaattatgtgattttctcaaattattag 9624648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 25093576 - 25093510
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||| |||| ||||||||||||||||| | || ||||| |||||| |||||||||||||||| ||||    
T  25093576 gacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 35994733 - 35994789
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||    
T  35994733 cgtgtccgacac-gacacttgtaattacactgaattatgtgatttt-tcaaattattag 35994789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 49505148 - 49505206
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| ||||| | || ||||| | |||||||||||||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattag 49505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 2941633 - 2941576
Alignment:
Q  349 agacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttct 406  Q
    |||||||||||||||||||||||||||| | || ||||| || ||| |||||||||||    
T  2941633 agacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgattttct 2941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 14209172 - 14209119
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||| |||||||||| ||||| |||||||||||||||| | |||||||||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgattttttaaaattattagt 14209119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 353 - 410
Target Start/End: Original strand, 14338471 - 14338528
Alignment:
Q  353 acgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    |||||||||||| |||||||||| ||||  |||||||||||||||| ||||| |||||    
T  14338471 acgtgtcgtgtctgacaccgacatttgtgattacattgaattatgtcattttttcaaa 14338528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 417
Target Start/End: Complemental strand, 21479178 - 21479125
Alignment:
Q  364 ccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||| ||| ||||| |||||| ||||||||| ||||||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattag 21479125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 28812574 - 28812521
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||||  |||| |||||||||||||||  |||||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagt 28812521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 34185053 - 34185175
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtc-----------cgacaccgacacttgtagttacattgaat 393  Q
    |||||||||||||||||||| ||||||||||||||| || |||  ||||| |||| ||||           ||||||||||||||||| ||||| |||||    
T  34185053 tatgaagcacggacactcctcggattaggcgtgtcccggtgtc-ggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaat 34185151  T
Q  394 tatgtgattttctcaaattattag 417  Q
    | ||||||||| | ||||||||||    
T  34185152 tgtgtgattttttgaaattattag 34185175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 353 - 417
Target Start/End: Original strand, 34307763 - 34307832
Alignment:
Q  353 acgtgtcgtgtccgacaccgacac-----ttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||||||||||     || || ||||| |||| ||||||||||||||||||||||||    
T  34307763 acgtgtcgtgtccgacaccgacacgacacttataattacactgaaatatgtgattttctcaaattattag 34307832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 1389958 - 1389918
Alignment:
Q  303 attatgaagcacggacactcctaggattaggcgtgtcctgg 343  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  1389958 attatgaagcacggacactccttggattaggcatgtcctgg 1389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 4990967 - 4991019
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| |||||||||||| ||||| |||||||||| ||||||||||| ||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatgtaattttctcaaactattag 4991019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 10268481 - 10268537
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||| ||||| |||||||||| ||||| | |||||||||||||| |||||||||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattatta 10268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 14829748 - 14829697
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||||||||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattag 14829697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 21256990 - 21257038
Alignment:
Q  369 accgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||| ||| | |||||||||||||||| ||||||||||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattag 21257038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 25948887 - 25948939
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| |||||| || ||||| |||||||||||||||| ||||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 4990913 - 4990948
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  4990913 tatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 8593200 - 8593157
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||    
T  8593200 tgtccgacaccgacacttgtaattatactgaattatgtgatttt 8593157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 15796294 - 15796345
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||| ||||| ||||| |||||||| ||||||| |||||||||||    
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattatta 15796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 17005621 - 17005672
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||| || ||||| |||||||| ||||||| |||||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattagt 17005672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 17568691 - 17568734
Alignment:
Q  373 acacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||| ||||||| |||||||| |||||||||||||||||    
T  17568691 acacttgtaattacattaaattatgtaattttctcaaattatta 17568734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 39756295 - 39756244
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||| ||| ||| |||||||||||||| | |||||||||    
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattatta 39756244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 6780404 - 6780466
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaatt 412  Q
    ||||||||| |||||||||||| |||| | || ||||| |||| || ||||||||||||||||    
T  6780404 gacacgtgttgtgtccgacaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 8842447 - 8842413
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtc 339  Q
    |||||||||||||||||||| ||||||||||||||    
T  8842447 tatgaagcacggacactcctcggattaggcgtgtc 8842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 413
Target Start/End: Complemental strand, 12704086 - 12704056
Alignment:
Q  383 ttacattgaattatgtgattttctcaaatta 413  Q
    |||||||||||||||||||||||||||||||    
T  12704086 ttacattgaattatgtgattttctcaaatta 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 406
Target Start/End: Complemental strand, 13414533 - 13414487
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttct 406  Q
    ||||||||||||||||| | || |||||||||||||| |||||||||    
T  13414533 gtgtccgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 750618 - 750671
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| || ||  |||||||||||| || |||||||||||||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagt 750671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 17052423 - 17052378
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    |||||||||||||| |||||||||| |||||| | |||||||||||    
T  17052423 cgacaccgacacttatagttacattaaattatattattttctcaaa 17052378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 41961650 - 41961703
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| |||||  |||| ||||||| || |||||||||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagt 41961703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 46191363 - 46191396
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||| ||||||||||||||||||||||||||    
T  46191363 ttacatttaattatgtgattttctcaaattatta 46191396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 52369816 - 52369783
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  52369816 ttacattgaattatgtaattttctcaaattatta 52369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 3164033 - 3164077
Alignment:
Q  373 acacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||  ||||| |||||||||||||||| ||||||||||||    
T  3164033 acacttgttcttacactgaattatgtgattttttcaaattattag 3164077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 7614356 - 7614466
Alignment:
Q  304 ttatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattt 403  Q
    ||||||||||| |||| || |  ||||||||||||| ||  |||| ||| |||| ||||| |||||||||||  | || ||| | |||||||||||||||    
T  7614356 ttatgaagcacagacattcttcagattaggcgtgtcttgatgtca-gac-cgtgccgtgttcgacaccgacatatataattatactgaattatgtgattt 7614453  T
Q  404 tctcaaattatta 416  Q
    ||| |||||||||    
T  7614454 tcttaaattatta 7614466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 8039835 - 8039887
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || ||||| |||||||| | ||||||||||||||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattag 8039887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 9800099 - 9800047
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||  | |||||  ||||||||| ||||||||||||||||||    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattag 9800047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 14979267 - 14979223
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaa 349  Q
    |||||||||||||||||||| || |||||||||||| || |||||    
T  14979267 tatgaagcacggacactcctcgggttaggcgtgtcccggtgtcaa 14979223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 15864950 - 15864841
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtc-gtgtccgacaccgacacttgtagttacattgaattatgtgattt 403  Q
    |||||||||||||||||| | |||||||||||||||  | ||| ||||||||||| |||||||||| |||||| | |  ||||| | |||||| | ||||    
T  15864950 tatgaagcacggacactctttggattaggcgtgtcc-cgtgtc-agacacgtgtcggtgtccgaca-cgacacctatgattacactaaattatatcattt 15864854  T
Q  404 tctcaaattatta 416  Q
    | |||||||||||    
T  15864853 tttcaaattatta 15864841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 20691383 - 20691327
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||| ||||||||||| | |  ||||| |||||||||| |||||||||||||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 418
Target Start/End: Complemental strand, 24633800 - 24633772
Alignment:
Q  390 gaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||||||||||||||||    
T  24633800 gaattatgtgattttctcaaattattagt 24633772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 27858404 - 27858348
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||| | |||  ||||||| ||||| || |||||||||||||||||    
T  27858404 gtgtccgacaccgacgcctgtgattacattcaattaggtcattttctcaaattatta 27858348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 416
Target Start/End: Original strand, 40697857 - 40697909
Alignment:
Q  364 ccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||| | | |||| |||||||||||| ||||||||| |||||||    
T  40697857 ccgacaccgacacatatggttagattgaattatgtcattttctcatattatta 40697909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 38078602 - 38078713
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||| | |||||| |||||||||||||||||| ||  | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38078602 tatgaagcacgaatactcctcggattaggcgtgtcctggtgttga-acatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 38078700  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  38078701 ttcaaattattag 38078713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 40258873 - 40258984
Alignment:
Q  304 ttatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattt 403  Q
    |||||||||| |||||||||| |||||||||||||||||| |||  |||| |||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  40258873 ttatgaagcatggacactcctcggattaggcgtgtcctggtgtcg-gacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattt 40258971  T
Q  404 tctcaaattatta 416  Q
    | |||||||||||    
T  40258972 tttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 22515828 - 22515939
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| ||||||||||||||  || |||  || | ||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  22515828 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcg-gatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22515926  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  22515927 ttcaaattattag 22515939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 42359391 - 42359501
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    ||||||||||||||||||| ||||||||||||||| || |||  |||||  ||| ||||||||||||||||||||| ||||| |||||| |||||||||     
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcg-gacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttt 42359489  T
Q  406 tcaaattattag 417  Q
    ||||||||||||    
T  42359490 tcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 305 - 415
Target Start/End: Complemental strand, 18337447 - 18337338
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||| |||| |||||  | |||  ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  18337447 tatgaagcacggacactcctcggatcaggcatgtcccagtgtcg-gacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T
Q  405 ctcaaattatt 415  Q
     ||||||||||    
T  18337348 ttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 37598949 - 37598838
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||||||||||||||    |||  ||||||||||||||||||||||||||||| || ||||| |||||| |||||||||    
T  37598949 tatgaagcacggacactcctcggattaggcgtgtcccattgtcg-gacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgatttt 37598852  T
Q  405 ctcaaattattagt 418  Q
     |||||||||||||    
T  37598851 ttcaaattattagt 37598838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 46348324 - 46348435
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||| ||| |||| |||||||||  || |||  |||||||||||||||||||||||||||||||| ||||| | |||||| |||||||    
T  46348324 tatgaagcacggacacacctcggatcaggcgtgtctcggtgtcg-gacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgatttt 46348422  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  46348423 ttcaaattattag 46348435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 51410143 - 51410031
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga-ttt 403  Q
    ||||||||||| | |||||| ||||||||||||||  || |||  || ||||||||||||||||||||||||||||| ||||| |||||||||||| |||    
T  51410143 tatgaagcacgaatactccttggattaggcgtgtctcggtgtcg-gatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 51410045  T
Q  404 tctcaaattattag 417  Q
    | ||||||||||||    
T  51410044 tttcaaattattag 51410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 1486646 - 1486761
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgac-----accgacacttgtagttacattgaattatgtga 400  Q
    ||||||||| ||||||||| ||||||||||||||| || |||  |||||||||||||||||||     |||||||||| || ||||| ||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcg-gacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtga 1486744  T
Q  401 ttttctcaaattattag 417  Q
    |||| ||||||||||||    
T  1486745 ttttttcaaattattag 1486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 417
Target Start/End: Complemental strand, 40181976 - 40181878
Alignment:
Q  318 cactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| ||||||||||||||| || || | ||||||||| |||||||||||||| || | || ||||| |||||||||||||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgt-aggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 32461394 - 32461516
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccg----------acacttgtagttacattgaatt 394  Q
    ||||||||||||||||| || |||||||||||||||  | ||| ||||||||||||||||||||||||          ||||||||| ||||||| ||||    
T  32461394 tatgaagcacggacacttcttggattaggcgtgtcccagtgtc-agacacgtgtcgtgtccgacaccgacacacaccaacacttgtaattacattaaatt 32461492  T
Q  395 atgtgattttctcaaattattagt 418  Q
    |||||||||| |||||||||||||    
T  32461493 atgtgattttttcaaattattagt 32461516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 1815375 - 1815277
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||| ||||| |||||||  |||||||||||||| || |||  |||| |||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  1815375 tatgaatcacggtcactcctcagattaggcgtgtcccggtgtcg-gacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgatttt 1815277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 22881606 - 22881669
Alignment:
Q  355 gtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagt 22881669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 36878584 - 36878468
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaag----acacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtga 400  Q
    |||||||||||||||||||| |||||||||||||||  | |||  |    ||| || ||||||| ||||||||||| | || ||||| ||||||||||||    
T  36878584 tatgaagcacggacactcctgggattaggcgtgtccccgtgtcgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtga 36878485  T
Q  401 ttttctcaaattattag 417  Q
    |||||||||||||||||    
T  36878484 ttttctcaaattattag 36878468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 31015155 - 31015050
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||| ||  ||||| ||||||||||||||| |  |||| |||||||||||||||||||||      ||||| ||||| ||||||||||||||||    
T  31015155 tatgaagcactgatcctccttggattaggcgtgtcccgatgtca-gacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgatttt 31015063  T
Q  405 ctcaaattattag 417  Q
    |||||||||||||    
T  31015062 ctcaaattattag 31015050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 417
Target Start/End: Original strand, 5898211 - 5898318
Alignment:
Q  309 aagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctca 408  Q
    |||||||||||||||| ||||||| ||||||| || ||   ||||||||||||||| ||||||||| | | || ||||| |||||||||||||||| |||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttg-gacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttca 5898309  T
Q  409 aattattag 417  Q
     ||||||||    
T  5898310 gattattag 5898318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 417
Target Start/End: Original strand, 18190061 - 18190160
Alignment:
Q  317 acactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||| |||||||| |||||| || |||  ||||||||| ||||| |||| ||||||||||| ||||| |||||||||| ||||| |||||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcg-gacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 405
Target Start/End: Original strand, 29163323 - 29163421
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    |||||||||| ||||| ||  |||||| ||||||| || |||| | ||||||||||||||||||||||||| | || ||| |||||||||||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcagg-cacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttc 29163421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 47989626 - 47989556
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||||| ||||||||||||||| |  ||| ||||| ||||||||||||||||||||||    
T  47989626 tatgaagcacggacactcctcggattaggcgtgtcccgatgtc-agacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 415
Target Start/End: Original strand, 16297223 - 16297333
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacacc---gacacttgtagttacattgaattatgtgatt 402  Q
    ||||||||||||||||||| |||||||||||||||||| |||  |||||  |||||||||||||||   |||| ||||| ||||| |||||| |||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtc-ggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaattttgtgatt 16297320  T
Q  403 ttctcaaattatt 415  Q
    || ||| ||||||    
T  16297321 ttttcatattatt 16297333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 41877464 - 41877522
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattag 41877522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 7918155 - 7918264
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtc-cgacaccgacacttgtagttacattgaattatgtgattt 403  Q
    |||||||||||||||||||| |||||||| ||||||||| |||| || ||||    || | |||||| ||||| | || ||||| |||||||||||||||    
T  7918155 tatgaagcacggacactcctcggattaggtgtgtcctggtgtca-gaaacgt----tgacacgacactgacacatataattacactgaattatgtgattt 7918249  T
Q  404 tctcaaattattagt 418  Q
    |||||||||||||||    
T  7918250 tctcaaattattagt 7918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 24577186 - 24577239
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagt 24577239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 2896062 - 2896173
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||| || ||||||| || |||||||| |||||| ||  ||  ||||| ||||||||| ||||||||||  | ||| |||| ||||||||||||||||    
T  2896062 tatgaaacatggacacttcttggattaggtgtgtcccggtctcg-gacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgatttt 2896160  T
Q  405 ctcaaattattag 417  Q
    |||||||||||||    
T  2896161 ctcaaattattag 2896173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 25934745 - 25934675
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||||| |||| |||||| |||  | |||| |||||||||||||||||||||||||||    
T  25934745 tatgaagcacggacactccttggataaggcgtatccccgtgtca-gacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 40917878 - 40917808
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||||| |||| ||||||||||||||| || |||  |||||||||||||||| ||||||||||    
T  40917878 tatgaagcacggacagtcctcggattaggcgtgtcccggtgtc-ggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 9709885 - 9709827
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||| | || |||||  ||||||||||||||||||||||||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattag 9709827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 31672889 - 31672947
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||| ||||||| ||||| ||||||| |||||||| ||||||||||||    
T  31672889 cgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattag 31672947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 416
Target Start/End: Original strand, 1864874 - 1864931
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||| |||||||||| | || ||||| ||||||||||||||||||||||||||||    
T  1864874 cgtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 5927331 - 5927392
Alignment:
Q  356 tgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| |||||||||| |||||||||| ||||||| |||||| ||||||| ||||||||||||    
T  5927331 tgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattag 5927392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 406
Target Start/End: Original strand, 10577676 - 10577776
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||| ||||||||||  | ||| ||||||| |||||||||| | ||||||| | || ||||| || ||| |||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtc-agacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgatttt 10577774  T
Q  405 ct 406  Q
    ||    
T  10577775 ct 10577776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 14332634 - 14332695
Alignment:
Q  357 gtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| || | || ||||| | ||||||||||||||||||||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagt 14332695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 30749958 - 30749858
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||| |||||||||| | || | |||| |||| | ||||| |||| ||| ||||||||||||||||| | || ||||| ||||||||||||||||    
T  30749958 tatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaa-acacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T
Q  405 ct 406  Q
    ||    
T  30749859 ct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 30771409 - 30771309
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||| |||||||||| | || | |||| |||| | ||||| |||| ||| ||||||||||||||||| | || ||||| ||||||||||||||||    
T  30771409 tatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaa-acacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T
Q  405 ct 406  Q
    ||    
T  30771310 ct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 113358 - 113306
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 1704992 - 1705044
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||||||||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 6427409 - 6427357
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| |||| | || |||||||||||||||||||||||||||||||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattag 6427357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 6427593 - 6427484
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacacc-----------gacacttgtagttacattgaat 393  Q
    |||||||||||||||||| |  |||||||||||||| || |||  ||||||||||||||||||| ||           ||||||||||||||||||||||    
T  6427593 tatgaagcacggacactcatcagattaggcgtgtcccggtgtcg-gacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaat 6427495  T
Q  394 tatgtgatttt 404  Q
    |||||||||||    
T  6427494 tatgtgatttt 6427484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 6612171 - 6612222
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 9828173 - 9828103
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||||| ||||||| ||||||| || |||  ||||||||||||||| ||||| |||||    
T  9828173 tatgaagcacggacactcctcggattagacgtgtcccggtgtc-ggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 26830701 - 26830608
Alignment:
Q  309 aagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||  |||||||||||||| ||  || | |||||||| ||||| |||| |||||||| || ||||||| ||||||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcga-acacgtgtagtgtctgaca-cgacacttataattacatttaattatgtgatttt 26830608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 19058850 - 19058908
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||||||||| ||||| |||||||||| || || | ||||||||||    
T  19058850 cgtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattag 19058908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 21530763 - 21530697
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||| |||||||||||||||||||||||| || ||| |   |||||| |||||||||||||||||||    
T  21530763 gacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 2288164 - 2288218
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||| |  | |||||||||||||||||||||||| |||||||||    
T  2288164 gtgtccgacaccgacacat--aattacattgaattatgtgattttcttaaattatta 2288218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 6332729 - 6332677
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtgatttt-tcaaattattagt 6332677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 12919063 - 12918967
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatt 402  Q
    ||||||||||| ||||| || |||| || |||||||  | |||| |||||||||||||||||| ||| |||| | || | ||||||||||||||||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtca-gacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgatt 12918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    |||||||||||| | || ||||| ||||||||||||||||||||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 48415667 - 48415704
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctg 342  Q
    |||||||||||||||||||| |||||||||||||||||    
T  48415667 tatgaagcacggacactccttggattaggcgtgtcctg 48415704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 5376500 - 5376552
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||| || ||||| |||||||||| ||||||| ||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattag 5376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 9103703 - 9103648
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||||||| ||| | | |||||||||||||| |||||||||||    
T  9103703 gtgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattatta 9103648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 28273089 - 28273141
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||| ||||| |||||||| ||||||| |||||| ||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagt 28273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 10572591 - 10572642
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||| | || |||||  |||||||||||||||||||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagt 10572642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 22947848 - 22947813
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  22947848 tatgaagcacggacactcctcggattaggcgtgtcc 22947813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 397
Target Start/End: Original strand, 24334694 - 24334737
Alignment:
Q  354 cgtgtcgtgtccgacaccgacacttgtagttacattgaattatg 397  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||    
T  24334694 cgtgacgtgtccgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 25272541 - 25272494
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaatt 412  Q
    |||||||||||||| || ||||| | ||||||||||||||||||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 27471567 - 27471618
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||| |||| |||| ||||| ||||||||||| |||||||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattag 27471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 404
Target Start/End: Complemental strand, 28663667 - 28663628
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  28663667 cgacaccgacacttgtaattacatagaattatgtgatttt 28663628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 32434718 - 32434769
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||| |||||||||| ||||| |||||||||||| ||| |||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagt 32434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Complemental strand, 34298477 - 34298442
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34298477 ttacactgaattatgtgattttctcaaattattagt 34298442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 35702543 - 35702578
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  35702543 tatgaagcacggacactcctcggattaggcgtgtcc 35702578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 417
Target Start/End: Complemental strand, 1262921 - 1262891
Alignment:
Q  387 attgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||||||||||||||||    
T  1262921 attgaattatgtgattttctcaaattattag 1262891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 418
Target Start/End: Original strand, 8842678 - 8842767
Alignment:
Q  328 attaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||  |||  || ||||||||||||||||||| | || | || ||||||| |||||| || ||||||||||||| ||||    
T  8842678 attaggcgtgtcctgatgtcg-gatacgtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattactagt 8842767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 417
Target Start/End: Original strand, 12443478 - 12443512
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||||||||||||||||||||||||||    
T  12443478 ttacactgaattatgtgattttctcaaattattag 12443512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 13436523 - 13436465
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||| |||| | || ||||| ||||||||||||||| || ||||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattag 13436465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 19637834 - 19637776
Alignment:
Q  358 tcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||| | |  ||||||||||| |||| ||||||| |||||||||    
T  19637834 tcgtgtccgacaccgacacatatgattacattgaataatgtcattttcttaaattatta 19637776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 21365993 - 21366027
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtc 339  Q
    |||||||||||||||||||| ||||||||||||||    
T  21365993 tatgaagcacggacactcctcggattaggcgtgtc 21366027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 21378635 - 21378585
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||| |||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattag 21378585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 417
Target Start/End: Complemental strand, 22947792 - 22947746
Alignment:
Q  371 cgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||| | || ||||||||||| ||||||||||||||||||    
T  22947792 cgacacttgtaataactttgaattatgtaattttctcaaattattag 22947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 31667487 - 31667433
Alignment:
Q  362 gtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||| |||  ||||||| |||||||| ||||||| |||||||||    
T  31667487 gtccgacaccgacacatgtgattacatttaattatgtcattttctaaaattatta 31667433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 2283725 - 2283676
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    ||||||| |||||| || ||||||||||| |||||||||| |||||||||    
T  2283725 cgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 3921708 - 3921675
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  3921708 ttacattgaattatgtcattttctcaaattatta 3921675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 9828103 - 9828050
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||| |  | ||||| |||||||||||||||| |||||||||||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagt 9828050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 340
Target Start/End: Original strand, 10572529 - 10572570
Alignment:
Q  299 tcaaattatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||| ||||||||||||||||||||| | |||||||||||||    
T  10572529 tcaacttatgaagcacggacactccttgaattaggcgtgtcc 10572570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 11571626 - 11571593
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  11571626 ttacattgaattatgtcattttctcaaattatta 11571593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 17425111 - 17425144
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||||||| |||||||||||    
T  17425111 ttacattgaattatgtgattttatcaaattatta 17425144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Complemental strand, 21621020 - 21620975
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||| ||||||  |||| ||||||||||||||||    
T  21621020 cgtgtccgacaccgacgcttgtaaatacactgaattatgtgatttt 21620975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 25361945 - 25361896
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 414  Q
    |||||| ||||| | || ||||| ||||||||||||||||||||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 27965941 - 27966050
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||| |||||||||| ||||||||||||||| || ||| || |||| | |||||| ||||| ||||  | || ||||| ||||||   |||||||    
T  27965941 tatgaagcatggacactcctcggattaggcgtgtcccggtgtc-aggcacgaggcgtgtctgacacggaca--tataattacactgaatttaatgatttt 27966037  T
Q  405 ctcaaattattag 417  Q
    |||||||| ||||    
T  27966038 ctcaaattgttag 27966050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 39410705 - 39410668
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgt 398  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  39410705 tgtccgacaccaacacatgtagttacattgaattatgt 39410668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 39953141 - 39953198
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| |  | ||||| | |||||||||||||||| ||||||||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattag 39953198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 40747791 - 40747824
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  40747791 ttacattgaattatgtcattttctcaaattatta 40747824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 48450551 - 48450588
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctg 342  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  48450551 tatgaagcacggacactcctcggattagacgtgtcctg 48450588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 416
Target Start/End: Complemental strand, 52903314 - 52903257
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||| | || ||||| |||||||| ||||||| | |||||||||    
T  52903314 cgtgtccgacaccgacacatataattacactgaattatatgattttattaaattatta 52903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 2218346 - 2218310
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcct 341  Q
    ||||||||||||||||||||  |||||||||||||||    
T  2218346 tatgaagcacggacactcctcagattaggcgtgtcct 2218310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 7988446 - 7988502
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||| |||||| |  |||||||||||||||| | ||||| |||||||||    
T  7988446 gtgtccgacaccaacacttatgattacattgaattatgtcactttcttaaattatta 7988502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 9629900 - 9629952
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||| || | ||| |||||||| ||||||| ||||||||||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattag 9629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 9630562 - 9630598
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcct 341  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  9630562 tatgaagcacgaacactcctcggattaggcgtgtcct 9630598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 18556456 - 18556508
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| | ||||||| ||||||| ||||||||||| || ||||||||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattag 18556508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 20157350 - 20157402
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | |  ||||| |||||||||||||||||||| ||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattag 20157402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 34371772 - 34371728
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaa 409  Q
    |||||||||||| | || ||||| |||||||||||||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 417
Target Start/End: Original strand, 38075966 - 38076022
Alignment:
Q  361 tgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||| | |  ||||| ||| ||||||||||| |||||||||||||    
T  38075966 tgtccgacaccgacacatatgattacactgacttatgtgatttactcaaattattag 38076022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 39130754 - 39130818
Alignment:
Q  352 cacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||| ||||||||||||||||| | || ||||| | |||||| | ||||||| |||||||||    
T  39130754 cacgtgttgtgtccgacaccgacacatataattacactaaattatataattttctaaaattatta 39130818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 2438661 - 2438771
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttc 405  Q
    ||||||||||||||||||| ||||||||||||||| || |||  |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||     
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcg-gacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttt 2438759  T
Q  406 tcaaattattag 417  Q
    | ||||||||||    
T  2438760 tgaaattattag 2438771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 37559095 - 37558984
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||||| |||||| | || |||  ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  37559095 tatgaagcacggacactcctcggattaagcgtgtaccggtgtcg-gacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt 37558997  T
Q  405 ctcaaattattag 417  Q
      |||||||||||    
T  37558996 tacaaattattag 37558984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 18840954 - 18841066
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||||||| |||||||| |||||| || |||  |||| |||||||||| |||||||||||||||| ||||| | |||||||| |||||    
T  18840954 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcg-gacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaatttt 18841052  T
Q  405 ctcaaattattagt 418  Q
     |||||||||||||    
T  18841053 ttcaaattattagt 18841066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 404
Target Start/End: Complemental strand, 5040845 - 5040754
Alignment:
Q  312 cacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||| ||| ||||||||||| || |||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcg-gacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 5040754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 38117100 - 38117211
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||||||||| ||| ||||||||||||||| || |||  ||||||||| |||||||||||| ||||||||| |||||  ||| |||||||||||    
T  38117100 tatgaagcacggacacccctcggattaggcgtgtcccggtgtcg-gacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgatttt 38117198  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  38117199 ttcaaattattag 38117211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 15972991 - 15972881
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||||| || | |||||||| |||||| || |||  |||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||    
T  15972991 tatgaagcacggacattcttcggattaggtgtgtcccggcgtcg-gacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaatttt 15972893  T
Q  405 ctcaaattatta 416  Q
     |||||||||||    
T  15972892 ttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 406
Target Start/End: Original strand, 20242668 - 20242768
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||||| ||||||| | |||| ||||||||||| | |||| ||||||||| ||||||||||||||||| | || ||||| ||||||||||||||||    
T  20242668 tatgaagcacagacactcttcggataaggcgtgtcctcgtgtca-gacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgatttt 20242766  T
Q  405 ct 406  Q
    ||    
T  20242767 ct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 416
Target Start/End: Original strand, 30404813 - 30404901
Alignment:
Q  327 gattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||| |||||||| |||  |||| |||||||||||||| |||||||||||| ||||| |||||||||||||||| |||||||||||    
T  30404813 gattaggcatgtcctggtgtcg-gacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 418
Target Start/End: Complemental strand, 5367289 - 5367198
Alignment:
Q  326 ggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||| ||||||  || | |||||||||||||||||||||| | || ||||| ||||||||||||||| ||||||||||||||    
T  5367289 ggattaggcgtgtcccggagtcg-gatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattagt 5367198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 28596587 - 28596492
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgat 401  Q
    |||||||||||||||||||| |||||||| ||||||  | |||  ||||||||||||||||||||||||||||| || ||||| ||| |||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcg-gacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgat 28596492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 43585990 - 43586050
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  43585990 gacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 43586050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 404
Target Start/End: Complemental strand, 12224329 - 12224243
Alignment:
Q  317 acactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    |||||||| |||||||||||||||  | |||  ||||||| |||||||||||||||||||||||| |||||||| |||||| ||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcg-gacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggatttt 12224243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 24009413 - 24009343
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||||| |||| ||||||||||  | |||| |||||||||||||||||||||||||||    
T  24009413 tatgaagcacggacactccttggataaggcgtgtccccgtgtca-gacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 19536391 - 19536451
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtga-ttttctcaaattattagt 418  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagt 19536451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 37419872 - 37419802
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||||| ||||||||||||||| || |||  ||||||  |||||||||||||||||||    
T  37419872 tatgaagcacggacactcctcggattaggcgtgtcccggtgtc-ggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 18420436 - 18420486
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| || || ||||||||||||||||||||||||||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattag 18420486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 26769640 - 26769571
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgaca 375  Q
    |||||||||||||||||||| |||||||||||||||  | |||  |||||||||||||||||| |||||||    
T  26769640 tatgaagcacggacactcctcggattaggcgtgtcccagtgtc-ggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 416
Target Start/End: Original strand, 18255974 - 18256031
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||||| || ||||||| |||||||||||||| | |||||||||    
T  18255974 cgtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattatta 18256031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 375
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgaca 375  Q
    |||||||| |||||||||| ||||||||||||||| || ||| |||||| || |||||||||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtc-agacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 30717460 - 30717582
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgac-----------acttgtagttacattgaat 393  Q
    |||||||||||||||||||| ||||||||||| |||  | ||| | ||||||||||||||||||| ||||           ||||||| ||||| |||||    
T  30717460 tatgaagcacggacactccttggattaggcgtatcccagtgtcga-acacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  394 tatgtgattttctcaaattattag 417  Q
    ||||||||||| ||||||||||||    
T  30717559 tatgtgattttttcaaattattag 30717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 417
Target Start/End: Original strand, 37411188 - 37411296
Alignment:
Q  308 gaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctc 407  Q
    ||||||| | ||||||| ||| |||||||||||  | |||  |||||| ||||||| ||||| |||||| | || | ||| |||||||||||||||||||    
T  37411188 gaagcacaggcactcctcggactaggcgtgtcccagtgtcg-gacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctc 37411286  T
Q  408 aaattattag 417  Q
    ||||||||||    
T  37411287 aaattattag 37411296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 371
Target Start/End: Original strand, 11223794 - 11223858
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacacc 371  Q
    ||||||||||||||||||||  |||||||||||||| || ||| ||||| |||||||||||||||||    
T  11223794 tatgaagcacggacactcctcagattaggcgtgtcccggtgtc-agaca-gtgtcgtgtccgacacc 11223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 417
Target Start/End: Complemental strand, 21091839 - 21091730
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttct 406  Q
    |||||||||||||||| | ||| |||| |||||| || |||  |||| ||| | |||| ||||| |||||||||| ||||| |||| ||||| |||||||    
T  21091839 tgaagcacggacactcttcggaataggtgtgtcccggtgtc-cgacaggtggcttgtctgacactgacacttgtaattacactgaagtatgttattttct 21091741  T
Q  407 caaattattag 417  Q
     ||||||||||    
T  21091740 taaattattag 21091730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 34691799 - 34691857
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||| | || ||||| |||||||| ||||||| ||||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 34714211 - 34714269
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||| | || ||||| |||||||| ||||||| ||||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 416
Target Start/End: Complemental strand, 35732468 - 35732418
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||||||||||| || ||| ||| |||||||||||||||    
T  35732468 gacaccgacacttgtagttacattcaaatatttgactttctcaaattatta 35732418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 974806 - 974753
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagt 974753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 12668423 - 12668476
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||| || ||||| |||||||||| ||||| |||||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagt 12668476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 15657923 - 15657870
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||| ||||| ||||| ||||||||||||||||  ||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagt 15657870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 18571068 - 18570980
Alignment:
Q  327 gattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||| |||  || | || |||||| |||||| ||||| | |  |||||||||||||||| |||||||||||||||||    
T  18571068 gattaggcgtgtcctggtgtcg-gatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 398
Target Start/End: Original strand, 34993923 - 34994015
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgt 398  Q
    ||||||||||| |||||||| | |||||||||||||  | |||  ||||| |||||||| |||||| ||||| | || ||||||||||||||||    
T  34993923 tatgaagcacgaacactccttgaattaggcgtgtcccagtgtcg-gacacatgtcgtgttcgacactgacacatataattacattgaattatgt 34994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 18422027 - 18421971
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||| ||||||||||||||||| ||||| ||||||||||||| || | |||||||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattatta 18421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 20539674 - 20539726
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||||| ||||| | |||||| ||||||| ||||||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattag 20539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 24067824 - 24067764
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    ||||||||||||||| |||||||||||||||  || |||| |||||||  |||||||||||    
T  24067824 gacacgtgtcgtgtctgacaccgacacttgtgatttcatttaattatgacattttctcaaa 24067764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 416
Target Start/End: Complemental strand, 30563453 - 30563417
Alignment:
Q  380 tagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30563453 tagttacattgaattatgtcattttctcaaattatta 30563417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 44860379 - 44860327
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || ||||| ||||||||| |||||||||||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattattag 44860327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 6940329 - 6940262
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||||| || ||||||||||||| ||||| | |||||||| | ||| | ||||||||||    
T  6940329 gacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattag 6940262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 10535686 - 10535729
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtca 348  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||    
T  10535686 tatgaagcacgaacactcctcggattaggcgtgtcctggtgtca 10535729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 11223864 - 11223915
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||| ||||| |||||||||| ||||| ||||| ||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattag 11223915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 410
Target Start/End: Original strand, 14450797 - 14450840
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    |||| |||||||||  ||||||||||||||||||||||||||||    
T  14450797 acactgacacttgtgattacattgaattatgtgattttctcaaa 14450840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 18255945 - 18255980
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||||||||||||||| |||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtcc 18255980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 418
Target Start/End: Complemental strand, 20473387 - 20473328
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||| ||| | |||||||||||    
T  20473387 cgtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagt 20473328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 31284118 - 31284055
Alignment:
Q  355 gtgtcgtgtccgacaccgacacttg-tagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||| |||||||||| |  || ||||| || ||||||||||||||||||||||||||    
T  31284118 gtgtcgtgtccaacaccgacacataataattacaatggattatgtgattttctcaaattattag 31284055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 36096305 - 36096375
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||||||||||| | || | ||||||||||  | |||| |||||||||||||||||||| ||||||    
T  36096305 tatgaagcacggacactctttggttaaggcgtgtccccgtgtca-gacacgtgtcgtgtccgacatcgacac 36096375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 42832277 - 42832328
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||| || ||||| |||| ||||| ||||||||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattag 42832328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 417
Target Start/End: Complemental strand, 18276594 - 18276528
Alignment:
Q  351 acacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||| || || |||||||||||   || ||||| ||||||| |||||||||||||||||||||    
T  18276594 acacgtgtggtatctgacaccgacacacataattacactgaattaagtgattttctcaaattattag 18276528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 21616803 - 21616769
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||||||||||||||||||||||||||    
T  21616803 ttacactgaattatgtgattttctcaaattattag 21616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 397
Target Start/End: Complemental strand, 21624332 - 21624294
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatg 397  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  21624332 cgtgtccgacaccgacacttgtaattacactgaattatg 21624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 417
Target Start/End: Original strand, 21782836 - 21782870
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||||||||||||||||||||||||||    
T  21782836 ttacactgaattatgtgattttctcaaattattag 21782870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 23718087 - 23718033
Alignment:
Q  363 tccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| ||||||||| | || ||||| |||||||||||| ||||||||||||||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattag 23718033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 24105759 - 24105705
Alignment:
Q  363 tccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||| ||||||||| | || ||||| |||||||||||| ||||||||||||||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattag 24105705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 31018655 - 31018597
Alignment:
Q  359 cgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||||||||| | || ||||| | ||| |||||||||||| ||||||||||    
T  31018655 cgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattag 31018597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 896275 - 896218
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||| ||||||| | |  |||||||||| ||||||||||||||||| ||||||    
T  896275 gtgtccgacgccgacacatatgattacattgaaatatgtgattttctcaaactattag 896218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 4332967 - 4332934
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||||||||| ||||||||||    
T  4332967 ttacattgaattatgtgattttcccaaattatta 4332934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 19613631 - 19613664
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  19613631 ttacattgaattatgttattttctcaaattatta 19613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 21374706 - 21374751
Alignment:
Q  372 gacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||| ||||| |||||||||| ||||| ||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattag 21374751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 417
Target Start/End: Complemental strand, 27084302 - 27084269
Alignment:
Q  384 tacattgaattatgtgattttctcaaattattag 417  Q
    ||||||||||||| ||||||||||||||||||||    
T  27084302 tacattgaattatatgattttctcaaattattag 27084269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 30335476 - 30335423
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||| ||||| ||||| | |||||||| ||||| |||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagt 30335423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 34691768 - 34691805
Alignment:
Q  303 attatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  34691768 attatgaaacacggacactcctcggattaggcgtgtcc 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 34714180 - 34714217
Alignment:
Q  303 attatgaagcacggacactcctaggattaggcgtgtcc 340  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  34714180 attatgaaacacggacactcctcggattaggcgtgtcc 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 36756344 - 36756397
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||| || ||||| |||||||||| ||||  |||||||||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagt 36756397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 38442366 - 38442313
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||| || ||| |||||||||||||||||| | |||| ||||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagt 38442313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 39323316 - 39323271
Alignment:
Q  372 gacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||| ||||| |||||||||| ||||| ||||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattag 39323271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 40682023 - 40681990
Alignment:
Q  383 ttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||||| |||||||||||||||||    
T  40682023 ttacattgaattatgtcattttctcaaattatta 40681990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 42511323 - 42511387
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacac 370  Q
    |||||||||||||||||||| ||||||| |||||||  | |||  ||||||||| |||||||||||    
T  42511323 tatgaagcacggacactcctcggattagccgtgtccctgtgtc-ggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 42832234 - 42832275
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtc 347  Q
    |||||||| |||||||||| ||||||||||||||| ||||||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtc 42832275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 416
Target Start/End: Complemental strand, 2331834 - 2331802
Alignment:
Q  384 tacattgaattatgtgattttctcaaattatta 416  Q
    |||| ||||||||||||||||||||||||||||    
T  2331834 tacactgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 22084757 - 22084830
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcc---tggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||||||||| ||||||| | |||||||||||||||   ||| ||| |||||||||| ||||||||||| |||||    
T  22084757 tatgaagcacagacactcatcggattaggcgtgtcccggtggtgtc-agacacgtgttgtgtccgacactgacac 22084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 23058442 - 23058494
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtga-ttttctcaaattatta 416  Q
    ||||||||||||||||| ||||| || ||||||||| |||| |||||||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattatta 23058494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 23921317 - 23921261
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||| | | || || ||||| |||||||||| |||||||||||||||||    
T  23921317 gtgtccgacaccaatatttataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 417
Target Start/End: Complemental strand, 30471093 - 30471045
Alignment:
Q  369 accgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||| | || |||||| ||||||||||||||||||||| ||||||    
T  30471093 accgacacatataattacatcgaattatgtgattttctcaaaatattag 30471045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 33153483 - 33153431
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||| |||||||||| ||||| |||||||||||||||| | |||| |||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgatttttttaaatcattag 33153431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 33884115 - 33884067
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctca 408  Q
    |||| ||||||||||||||||| ||||| ||||| |||| |||||||||    
T  33884115 gtgttcgacaccgacacttgtaattacactgaatcatgtcattttctca 33884067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 36756275 - 36756307
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgt 338  Q
    ||||||||| |||||||||||||||||||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgt 36756307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 416
Target Start/End: Original strand, 40361737 - 40361805
Alignment:
Q  348 aagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||||||||| |||||| |||  | || ||||| | |||||||| ||||| |||||||||||    
T  40361737 aagacacgtgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 304 - 417
Target Start/End: Original strand, 402 - 514
Alignment:
Q  304 ttatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattt 403  Q
    ||||||||||||||||||||| |||||||| |||||| || |||  |||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  402 ttatgaagcacggacactcctcggattaggtgtgtcccggtgtcg-gacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattt 500  T
Q  404 tctcaaattattag 417  Q
    | ||||||||||||    
T  501 tttcaaattattag 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 307 - 416
Target Start/End: Complemental strand, 70394 - 70286
Alignment:
Q  307 tgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttct 406  Q
    ||||||||| |||||| | ||||||||| |||||||| |||  ||||||||||||||||||||||||||||| || ||||| |||||||||| ||||| |    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcg-gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttatttttt 70296  T
Q  407 caaattatta 416  Q
    ||||||||||    
T  70295 caaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 306 - 418
Target Start/End: Complemental strand, 13523 - 13406
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgaca------cttgtagttacattgaattatgtg 399  Q
    ||||||||||||||||||| |||||||| ||||||| | ||| |||| ||||||||||||||||||||||      |||||| || || |||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtc-agacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtg 13425  T
Q  400 attttctcaaattattagt 418  Q
    |||||||||||||||||||    
T  13424 attttctcaaattattagt 13406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 306 - 418
Target Start/End: Original strand, 21804 - 21921
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgaca------cttgtagttacattgaattatgtg 399  Q
    ||||||||||||||||||| |||||||| ||||||| | ||| |||| ||||||||||||||||||||||      |||||| || || |||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtc-agacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtg 21902  T
Q  400 attttctcaaattattagt 418  Q
    |||||||||||||||||||    
T  21903 attttctcaaattattagt 21921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 8916 - 8805
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||||| ||||||  |||||||||||||  || |||  |||||||||||||||||||||||||||||||| ||||| | ||| || |||||||    
T  8916 tatgaagcacggagactcctcagattaggcgtgtctcggtgtcg-gacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgatttt 8818  T
Q  405 ctcaaattattag 417  Q
     ||||||||||||    
T  8817 ttcaaattattag 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 14645 - 14536
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||| ||||||||  |||||||||||||  || |||  ||||||||||||||||||||||   ||||||| ||||| ||||||||||||||||    
T  14645 tatgaagcacgtacactccttcgattaggcgtgtctcggtgtcg-gacacgtgtcgtgtccgacacc---acttgtaattacactgaattatgtgatttt 14550  T
Q  405 ctcaaattattagt 418  Q
     |||||||||||||    
T  14549 ttcaaattattagt 14536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 398
Target Start/End: Original strand, 45471 - 45563
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgt 398  Q
    ||||||||||| ||| || | ||||||||| ||||  || |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  45471 tatgaagcacgtacaatctttggattaggcatgtcgcggtgtca-gacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 404
Target Start/End: Original strand, 4822 - 4922
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtcc--gacaccgacacttgtagttacattgaattatgtgatt 402  Q
    |||||||||||||||||||| |||||||||||||||  | |||  |||| ||||||||| |  |||||| ||||||||| ||||| ||||||||||||||    
T  4822 tatgaagcacggacactcctcggattaggcgtgtccctgtgtc-ggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 4920  T
Q  403 tt 404  Q
    ||    
T  4921 tt 4922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 241723 - 241653
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||||||||||| || ||||||||||||||| || |||  |||||||||||||||||||||| ||||    
T  241723 tatgaagcacggacacttctcggattaggcgtgtcccggtgtc-ggacacgtgtcgtgtccgacaccaacac 241653  T

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Target: scaffold0475 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 3426 - 3345
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttaca 387  Q
    |||||||||||||||||||| |||||||||||||||  | ||| |  |||||||| |||||||||| |||||||||| |||||    
T  3426 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcca-ccacgtgtcttgtccgacactgacacttgtaattaca 3345  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 92940 - 92875
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacacc 371  Q
    |||||||||||||||||||| ||||||||||||||| || |||  |||| |||||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtc-cgacatgtgtcgtgtccgacacc 92875  T

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Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 92859 - 92814
Alignment:
Q  372 gacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattag 92814  T

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Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 402
Target Start/End: Complemental strand, 123686 - 123650
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgatt 402  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgatt 123650  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 63837 - 63780
Alignment:
Q  360 gtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||| |||||||||||||||| || || |||||||||| ||||||||||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattag 63780  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 71864 - 71784
Alignment:
Q  295 aatctcaaattatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||||||  |||||||||| ||||||||| ||||||| ||||||| || |||  ||||||||| |||||||||||||||||    
T  71864 aatctcaacctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcg-gacacgtgttgtgtccgacaccgacac 71784  T

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Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 20231 - 20179
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||| |||||||||| ||||| |||||||||||||||| ||||||||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattag 20179  T

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Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 51888 - 51818
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgaca---cttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    ||||||| ||||||| ||||||||||   |||||| ||||| |||||||||||||||| ||||||||||||    
T  51888 gacacgtatcgtgtctgacaccgacaacacttgtaattacactgaattatgtgattttttcaaattattag 51818  T

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Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 17750 - 17802
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||| ||||| | |||||||||||||| |||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagt 17802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 415
Target Start/End: Complemental strand, 53236 - 53189
Alignment:
Q  368 caccgacacttgtagttacattgaattatgtgattttctcaaattatt 415  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 46741 - 46690
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    ||||||||||| ||||| ||||| |||||||||||||||| |||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattatta 46690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 46780 - 46741
Alignment:
Q  300 caaattatgaagcacggacactcctaggattaggcgtgtc 339  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  46780 caaactatgaagcacggacactcctcggattaggcgtgtc 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 90961 - 90851
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgatttt 404  Q
    ||||||||||  |||||| | |||||||||||||  ||| |||  ||||||||| ||||| |||| |||||  | || ||||| |||||||| |||||||    
T  90961 tatgaagcacatacactcattggattaggcgtgttttggtgtcg-gacacgtgttgtgtctgacatcgacatatataattacactgaattatatgatttt 90863  T
Q  405 ctcaaattatta 416  Q
    ||||||||||||    
T  90862 ctcaaattatta 90851  T

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Target: scaffold0697 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 1718 - 1652
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||| |||||||||||||||||||||||| || ||| |   |||||| |||||||||||||||||||    
T  1718 gacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 1652  T

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Target: scaffold0512 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 387
Target Start/End: Original strand, 4977 - 5058
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttaca 387  Q
    |||||||||| ||||||||| ||||||||| ||||     |||  |||||||||||||||||||||||||||||||| |||||    
T  4977 tatgaagcacagacactcctcggattaggcatgtctcaatgtcg-gacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 418
Target Start/End: Complemental strand, 8077 - 8016
Alignment:
Q  356 tgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||||||||| || ||||| || ||||| ||||||| |||||||||||||    
T  8077 tgtcgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagt 8016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 376
Target Start/End: Original strand, 263303 - 263372
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    ||||| ||||||||||||| |||||||||||||| |||  || | |||||||||||||| |||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcga-acacgtgtcgtgtctgacaccgacac 263372  T

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Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 263372 - 263424
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||| ||||||| || ||||| ||||||||||| |||||||||||||||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattag 263424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 416
Target Start/End: Original strand, 225199 - 225319
Alignment:
Q  306 atgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtc-gtgtccgacac----------cgacacttgtagttacattgaatt 394  Q
    ||||||||||||||||||| | |||||||||||||||| ||| | ||||| ||| |||||||||||          |||||||| || |||||||| |||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcga-acacgcgtcagtgtccgacacgacaccaacacgacacttataattacattgtatt 225297  T
Q  395 atgtgattttctcaaattatta 416  Q
    |||| |||||||||||||||||    
T  225298 atgtcattttctcaaattatta 225319  T

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Target: scaffold0246 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 19654 - 19582
Alignment:
Q  350 gacacgtgtcgtgtccgacaccgaca-----cttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||||||| |||||||||     |||||| ||||| |||||||||||||||| |||||||||||||    
T  19654 gacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtgatttt-tcaaattattagt 19582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 26432 - 26399
Alignment:
Q  385 acattgaattatgtgattttctcaaattattagt 418  Q
    ||||||||||||||||||||||||||||||||||    
T  26432 acattgaattatgtgattttctcaaattattagt 26399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 9747 - 9800
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagt 418  Q
    |||||||||||| | || ||||| ||||||| ||||||||||||||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagt 9800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 417
Target Start/End: Original strand, 7020 - 7084
Alignment:
Q  353 acgtgtcgtgtccgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||| |||||||||||| ||||||||| ||| | | |||||||| ||||| ||||||||||||    
T  7020 acgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattag 7084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 23829 - 23777
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtga-ttttctcaaattatta 416  Q
    ||||||||||||||||| ||||| |||||||||||| |||| |||||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 23777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 416
Target Start/End: Complemental strand, 130538 - 130490
Alignment:
Q  368 caccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||| ||||| |||||||||||||||| ||||| |||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactatta 130490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 135312 - 135364
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || |||||  ||||||||||||||||||||||||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattag 135364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 25768 - 25819
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||||||| || ||||| | ||||||||||||||||| ||||||||    
T  25768 cgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 3849 - 3900
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||| |||||||||| ||||| |||||||||||||||| | |||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 3057 - 2987
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacac 376  Q
    |||| ||||||||||||||| ||||||||||||| | || ||| | |||||||||||||| || ||||||||    
T  3057 tatggagcacggacactcctcggattaggcgtgttccggtgtcga-acacgtgtcgtgtctgataccgacac 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 391
Target Start/End: Complemental strand, 8719 - 8634
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccgacacttgtagttacattga 391  Q
    |||||||||||||||||||| ||||||||||| |||  | |||  |||||||||||||| | |||| |||||  ||| |||||||||    
T  8719 tatgaagcacggacactccttggattaggcgtatcccagtgtc-ggacacgtgtcgtgttcaacacagacacgagtaattacattga 8634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 28907 - 28858
Alignment:
Q  367 acaccgacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||| | || ||||||||||||||| |||||||| |||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaattatta 28858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 178819 - 178872
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatg-tgattttctcaaattattagt 418  Q
    ||||| |||||||||| ||||| ||||||||| ||||||| |||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagt 178872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 192256 - 192300
Alignment:
Q  372 gacacttgtagttacattgaattatgtgattttctcaaattatta 416  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattatta 192300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 5926 - 5993
Alignment:
Q  305 tatgaagcacggacactcctaggattaggcgtgtcctggagtcaagacacgtgtcgtgtccgacaccga 373  Q
    ||||| |||||||||||||| |||| |||||||||   | ||| ||||||||||||||| |||||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtc-agacacgtgtcgtgttcgacaccga 5993  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 6371 - 6319
Alignment:
Q  365 cgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||||||| | || |||||||||||||||  ||||| ||||||||||||    
T  6371 cgacaccgacacatataattacattgaattatgcaattttgtcaaattattag 6319  T

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Target: scaffold0314 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 9006 - 8962
Alignment:
Q  366 gacaccgacacttgtagttacattgaattatgtgattttctcaaa 410  Q
    |||||||||||||||  |||| ||||||||||| |||||||||||    
T  9006 gacaccgacacttgtgattacgttgaattatgtcattttctcaaa 8962  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 44529 - 44577
Alignment:
Q  369 accgacacttgtagttacattgaattatgtgattttctcaaattattag 417  Q
    |||||||| | || ||||| |||||||||||||||||||||||| ||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttag 44577  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 343
Target Start/End: Complemental strand, 188512 - 188480
Alignment:
Q  311 gcacggacactcctaggattaggcgtgtcctgg 343  Q
    |||||||||||||| ||||||||||||||||||    
T  188512 gcacggacactcctcggattaggcgtgtcctgg 188480  T

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