View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1295_high_14 (Length: 427)
Name: NF1295_high_14
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1295_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 42 - 415
Target Start/End: Original strand, 40151914 - 40152289
Alignment:
| Q |
42 |
cagagcgaaggtcaacttgccaatggttacaacgagttgggctaagcatattttgaatttcacttccactgttgtagaagcgctgaaatcattgtggaat |
141 |
Q |
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| T |
40151914 |
cagagcgaaggtcaacttgccaatggttacaacgagttgggctaagcatattttgaatttcacttccactgctgtagaagcgctgaaatcattgtggaat |
40152013 |
T |
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| Q |
142 |
attgccaatggttacaacgagttggtgataaggagaacgaagagaggatgatatatgttggtgccccgggtttgagctcaattgccatgtctgattttct |
241 |
Q |
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| T |
40152014 |
atcgccaatggttacaacgagttggtgataaggagaacgaagagaggatgatatatgttggtgccccgggtttgagctcaattgccatgtctgattttct |
40152113 |
T |
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| Q |
242 |
ccacagcgcatgtacagtccagcaactccaggagaatacctattcaatggagtacgaactgcaaatggcaaagaaggacaaagatgaccatcaaaaacgt |
341 |
Q |
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| T |
40152114 |
ccacagcgcatgtacagtccagcaactccaggagaatacctattcaatggagtacgaactgcaaatggcaaagaaggacaaagatgaccatcaaaaacgt |
40152213 |
T |
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| Q |
342 |
ttg--taagctggccgcgtggagcagaagatgaatgacatgtcttctgaaaataagagactgatactaacaagaat |
415 |
Q |
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| T |
40152214 |
ttgtataagctggccgcgtggagcagaagatgaatgacatgtcttctgaaaataagagactaatactaacaagaat |
40152289 |
T |
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