View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1295_high_20 (Length: 344)
Name: NF1295_high_20
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1295_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 14 - 315
Target Start/End: Original strand, 30547176 - 30547476
Alignment:
| Q |
14 |
gaataaacaaaaaccagaacgtttccaaattttgagtaaggaataaaatcatccaattgcgtatcaaatagttccaaagctaa-caagttgatttgacct |
112 |
Q |
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| T |
30547176 |
gaataaacaaaaaccagaacgtttccaaattttgagtaaggaataaaatcatccaatcgcgtatcaaatagttccaaagctaatcaagttgatttgacct |
30547275 |
T |
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| Q |
113 |
gcagttttcatactaacaagatcttgcaaactaataattggaattgaagcaagaatccatgtatcatccctttattcattcataccatacccacggtaac |
212 |
Q |
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| T |
30547276 |
gcaattttcatactaacaagatcttgcaaactaataattggaattgaagcaagaatccatgtatcatccctttattcattcataccatacccacggtaac |
30547375 |
T |
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| Q |
213 |
acacacattcatcttaatgcaaaagctacacttgagacaagaaaaatttgggttcacaaaaataaacacagataacacggacaactccaagtcatgtatc |
312 |
Q |
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| T |
30547376 |
acacacattcatcttaatgcaaaagctgcacttgagaca--aaaaaattgggttcacaaaaataaacacagataacacggacaactccaagtcatgtatc |
30547473 |
T |
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| Q |
313 |
acc |
315 |
Q |
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| T |
30547474 |
acc |
30547476 |
T |
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