View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1295_high_21 (Length: 309)

Name: NF1295_high_21
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1295_high_21
NF1295_high_21
[»] chr6 (29 HSPs)
chr6 (1-291)||(4558625-4558915)
chr6 (2-197)||(4572467-4572660)
chr6 (1-131)||(4587132-4587260)
chr6 (6-96)||(4612253-4612341)
chr6 (212-289)||(4572706-4572788)
chr6 (3-63)||(4258742-4258802)
chr6 (1-59)||(3173503-3173561)
chr6 (3-59)||(4507413-4507469)
chr6 (3-59)||(4513549-4513605)
chr6 (3-59)||(4618803-4618859)
chr6 (3-63)||(4623809-4623869)
chr6 (1-59)||(4603610-4603668)
chr6 (1-55)||(4627650-4627704)
chr6 (10-55)||(4255395-4255440)
chr6 (1-61)||(4575955-4576015)
chr6 (237-289)||(4587258-4587310)
chr6 (1-61)||(4482365-4482425)
chr6 (1-61)||(4497813-4497873)
chr6 (6-65)||(4581519-4581578)
chr6 (1-55)||(4471414-4471468)
chr6 (1-55)||(4488771-4488825)
chr6 (10-98)||(4599672-4599758)
chr6 (3-55)||(4265631-4265683)
chr6 (3-55)||(4517842-4517894)
chr6 (3-59)||(4565531-4565587)
chr6 (3-59)||(4594512-4594568)
chr6 (1-55)||(4462707-4462761)
chr6 (1-38)||(4569570-4569607)
chr6 (11-59)||(4493415-4493463)
[»] scaffold0475 (1 HSPs)
scaffold0475 (6-61)||(2329-2384)
[»] chr3 (1 HSPs)
chr3 (3-59)||(1282935-1282991)
[»] scaffold0288 (1 HSPs)
scaffold0288 (3-59)||(2021-2077)
[»] scaffold0199 (1 HSPs)
scaffold0199 (3-59)||(1260-1316)
[»] chr8 (2 HSPs)
chr8 (3-59)||(1676023-1676079)
chr8 (3-61)||(20862378-20862436)
[»] chr7 (1 HSPs)
chr7 (3-65)||(3088247-3088309)


Alignment Details
Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 4558625 - 4558915
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttgagct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4558625 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttgagct 4558724  T
Q  101 aagggaagccaatggtttaataaagataaagccaatgtttcttggatttgtgtaaaagaagataagagacaaaagacaaggaaagcaaactcaaattcta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4558725 aagggaagccaatggtttaataaagataaagccaatgtttcttggatttgtgtaaaagaagataagagacaaaagtcaaggaaagcaaactcaaattcta 4558824  T
Q  201 aggaatatgtaacacaataattgatacatacttgtcaagtcaccactttttgttatagaaggaaaacaatttttcattaaaaagtttattg 291  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4558825 agtaatatgtaacacaataattgatacatacttatcaagtcaccactttttgttatagaaggaaaacaatttttcattaaaaagtttattg 4558915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 4572467 - 4572660
Alignment:
Q  2 caacaatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttgagcta 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4572467 caacaatggattgatatggccttgaactggatatgggattaacacagcatgtggttttttatcactcattattgagtttttgtgtttgaatgttgagcta 4572566  T
Q  102 agggaagccaatggtttaataaagataaagccaatgtttcttggatttgtgtaaaagaagataagagacaaaagacaaggaaagcaaactcaaatt 197  Q
    | |||| |||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||    
T  4572567 a-ggaaaccaatgttttaataaagataaatccaatgtttcttggatttgtggaaaagaagat-agagacaaaagacaaggaaagcaaaatcaaatt 4572660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4587132 - 4587260
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttgagct 100  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||  ||||||||||| ||||  ||||||||||||| ||||||     
T  4587132 tcaacaatggattgatatggccttgaactggagatgggattaacacagcatgaggttttgaatcactcatttctgag--tttgtgtttgaattttgagca 4587229  T
Q  101 aagggaagccaatggtttaataaagataaag 131  Q
    |||||||||||||||||||||| ||||||||    
T  4587230 aagggaagccaatggtttaatagagataaag 4587260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 4612341 - 4612253
Alignment:
Q  6 aatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttg 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| ||||  |||||||||||||||||    
T  4612341 aatggattgatatggccttgaactggatatggaattaacactgcatgtggttttgaatcactcatttctgag--tttgtgtttgaatgttg 4612253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 4572706 - 4572788
Alignment:
Q  212 acacaataattgatacatacttgtcaagtcaccactttttgtt-----atagaaggaaaacaatttttcattaaaaagtttat 289  Q
    |||||||||||||| |||||| |||||||||||||||||||||     | |||||||||||||||||||||||||||||||||    
T  4572706 acacaataattgatgcatactagtcaagtcaccactttttgttacgtgagagaaggaaaacaatttttcattaaaaagtttat 4572788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 4258802 - 4258742
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttat 63  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  4258802 aacaatggattgatatggccttgagctggatatggaatcaacacagcatgtggctttttat 4258742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3173503 - 3173561
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  3173503 tcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggtttt 3173561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 4507413 - 4507469
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  4507413 aacaatggattgatatggccttgagttggatatggaatcaacacagcatgtggtttt 4507469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 4513605 - 4513549
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  4513605 aacattggattgatatggccttgaagtggatatggaatcaacacagcatgtggtttt 4513549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 4618803 - 4618859
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  4618803 aacaatggattgatatggccttgaactggatatggaatcatcacaacatgtggtttt 4618859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 4623809 - 4623869
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttat 63  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||||    
T  4623809 aacaatggattgatatgaccttgaactggatatgcaatcaacacagcatgtggctttttat 4623869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4603610 - 4603668
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  4603610 tcaacattggattgatatggccttgaagtggatatggaatcaacacagcatgttgtttt 4603668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4627650 - 4627704
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg 55  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  4627650 tcaacaatggattgatatggccttgaagtggaaatggaatcaacacagcatgtgg 4627704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 4255440 - 4255395
Alignment:
Q  10 gattgatatggccttgaactggatatggaattaacacagcatgtgg 55  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4255440 gattgatatggccttgaactggatatggaatcaacacagcatgtgg 4255395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4575955 - 4576015
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttttt 61  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  4575955 tcaacaatgcattgatatggccttgaactggaaatggagttaacactgcatgtggcttttt 4576015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 4587258 - 4587310
Alignment:
Q  237 aagtcaccactttttgttatagaaggaaaacaatttttcattaaaaagtttat 289  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  4587258 aagtgaccactttttgttataaaaggaaatcaatttttcattaaaaagtttat 4587310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4482365 - 4482425
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttttt 61  Q
    ||||||||| |||||||||||||||| ||||| ||||| | ||||| ||||||||||||||    
T  4482365 tcaacaatgcattgatatggccttgagctggaaatggagtcaacactgcatgtggtttttt 4482425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4497873 - 4497813
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttttt 61  Q
    |||||||||||||||||||||||| || |||| ||||| ||||||| |||||||| |||||    
T  4497873 tcaacaatggattgatatggccttaaattggaaatggagttaacactgcatgtggcttttt 4497813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 4581519 - 4581578
Alignment:
Q  6 aatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttatca 65  Q
    |||||| ||||||| ||||||| |||||||||||| ||||| |||||||| |||||||||    
T  4581519 aatggagtgatatgtccttgaagtggatatggaatcaacactgcatgtggctttttatca 4581578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4471414 - 4471468
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg 55  Q
    ||||||||| |||||||||||||||| ||||| ||||||| || |||||||||||    
T  4471414 tcaacaatgcattgatatggccttgagctggacatggaatcaatacagcatgtgg 4471468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4488825 - 4488771
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg 55  Q
    ||||||||| |||||||||||||||||||||| ||||  ||||||| ||||||||    
T  4488825 tcaacaatgcattgatatggccttgaactggaaatggtgttaacactgcatgtgg 4488771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 4599672 - 4599758
Alignment:
Q  10 gattgatatggccttgaactggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttgag 98  Q
    |||||||||  ||||||| |||  ||||||| || || |||||| |||||||| ||||||||| |||||||  ||||||||||||||||    
T  4599672 gattgatatttccttgaattggtaatggaatcaatactgcatgtagttttttaccactcatttgtgagttt--gtgtttgaatgttgag 4599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 4265683 - 4265631
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg 55  Q
    ||||||| ||||||||||||||||| ||||  |||||| ||||||||||||||    
T  4265683 aacaatgcattgatatggccttgaaatggagctggaatcaacacagcatgtgg 4265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 4517842 - 4517894
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg 55  Q
    ||||| ||||||||||||||||||| |||||||||| ||| ||| ||||||||    
T  4517842 aacaacggattgatatggccttgaagtggatatggagttatcactgcatgtgg 4517894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 4565531 - 4565587
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    ||||||||||| ||||| ||||||| ||||  |||||| ||||||||||||||||||    
T  4565531 aacaatggatttatatgtccttgaaatggagctggaatcaacacagcatgtggtttt 4565587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 4594512 - 4594568
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    ||||||||||| ||||| ||||||| ||||  |||||| ||||||||||||||||||    
T  4594512 aacaatggatttatatgtccttgaagtggagctggaatcaacacagcatgtggtttt 4594568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4462707 - 4462761
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg 55  Q
    ||||||||| |||||||||||||||   |||| ||||||| ||||||||||||||    
T  4462707 tcaacaatgcattgatatggccttgggatggacatggaatcaacacagcatgtgg 4462761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4569570 - 4569607
Alignment:
Q  1 tcaacaatggattgatatggccttgaactggatatgga 38  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  4569570 tcaataatggattgatatggccttgaagtggatatgga 4569607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 4493415 - 4493463
Alignment:
Q  11 attgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    ||||||||| |||||| ||||| ||||||| ||||| ||||||||||||    
T  4493415 attgatatgaccttgagctggaaatggaatcaacactgcatgtggtttt 4493463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 2329 - 2384
Alignment:
Q  6 aatggattgatatggccttgaactggatatggaattaacacagcatgtggtttttt 61  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2329 aatggattgatatggccttgaactggatatggaatcaacacagcatgtggtttttt 2384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 1282935 - 1282991
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  1282935 aacaatggattgatatggccttgagctggatatggaatcaacacagcatgtggtttt 1282991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 2077 - 2021
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  2077 aacaatggattgatatggccttgaactggatatggaatcatcacaacatgtggtttt 2021  T

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Target: scaffold0199 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 1260 - 1316
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  1260 aacaatggattgatatggccttgagctggatatggaatgaacacagcatgtgatttt 1316  T

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Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 1676023 - 1676079
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt 59  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  1676023 aacaatggattgatatggccttgagctggatatggaatgaacacagcatgtgatttt 1676079  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 20862436 - 20862378
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttttt 61  Q
    |||| |||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||    
T  20862436 aacattggattgatatgaccttgaagtggatatggagttaacactgcatgtggtttttt 20862378  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 3088247 - 3088309
Alignment:
Q  3 aacaatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttatca 65  Q
    ||||||||||| ||||| ||||||| |||||||||||| |||||||||||||| |||||||||    
T  3088247 aacaatggatttatatgaccttgaagtggatatggaatcaacacagcatgtggctttttatca 3088309  T

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