View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1295_high_23 (Length: 306)
Name: NF1295_high_23
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1295_high_23 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 73 - 306
Target Start/End: Original strand, 36354720 - 36354951
Alignment:
| Q |
73 |
agacccttcacattcattctatatataacttcatgataattgttgttaactttaaatgaactaattatcttgtttatagtgtttcaacccgtgctgcttg |
172 |
Q |
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| T |
36354720 |
agacccttcacattcattctatatataacttcatgataattgttgttaactttaaatgaactaattatcttgtttatagtg-ttcaacccgtgctgcttg |
36354818 |
T |
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| Q |
173 |
catcttttcctaactagttgatcactgacttatatttgtctatcaaaagaagaaaaaacttaatagtgttcgtatattcatagcaaatgtaggtgtagaa |
272 |
Q |
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| T |
36354819 |
catcttttcctaactagttgatcactgacttatatttgtctatcaaaagaagaaaaaactt-atagtgttcatatattcatagcaaatgtaggtgtagaa |
36354917 |
T |
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| Q |
273 |
tgacgccaatggttttatgcatagaaactaataa |
306 |
Q |
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| T |
36354918 |
tgacgccaatggttttatgcatagaaactaataa |
36354951 |
T |
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