View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1295_high_26 (Length: 292)

Name: NF1295_high_26
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1295_high_26
NF1295_high_26
[»] chr7 (40 HSPs)
chr7 (27-253)||(21669984-21670210)
chr7 (25-253)||(16376543-16376771)
chr7 (29-253)||(43933546-43933770)
chr7 (27-253)||(21656631-21656857)
chr7 (25-253)||(40968894-40969122)
chr7 (27-253)||(13786173-13786399)
chr7 (26-253)||(15109664-15109891)
chr7 (26-253)||(21804571-21804798)
chr7 (26-253)||(27903416-27903643)
chr7 (26-253)||(42242153-42242380)
chr7 (27-253)||(38163339-38163565)
chr7 (25-253)||(3840639-3840867)
chr7 (26-253)||(33916946-33917173)
chr7 (43-253)||(24924082-24924292)
chr7 (27-253)||(21341826-21342052)
chr7 (27-253)||(27138528-27138754)
chr7 (24-253)||(31373459-31373688)
chr7 (27-253)||(17178237-17178464)
chr7 (59-253)||(21753524-21753718)
chr7 (51-221)||(39030276-39030446)
chr7 (208-253)||(31096703-31096748)
chr7 (210-253)||(3840912-3840955)
chr7 (210-253)||(16376812-16376855)
chr7 (210-253)||(17178508-17178551)
chr7 (210-253)||(21341737-21341780)
chr7 (210-253)||(21656547-21656590)
chr7 (210-253)||(21669895-21669938)
chr7 (210-253)||(21804842-21804885)
chr7 (210-253)||(27138798-27138841)
chr7 (210-253)||(31373370-31373413)
chr7 (210-253)||(33917217-33917260)
chr7 (210-253)||(42242424-42242467)
chr7 (212-253)||(43933815-43933856)
chr7 (210-250)||(24924001-24924041)
chr7 (210-253)||(15109930-15109973)
chr7 (210-253)||(21753760-21753803)
chr7 (210-253)||(27903686-27903729)
chr7 (210-253)||(31096615-31096658)
chr7 (46-92)||(21681073-21681119)
chr7 (43-87)||(21713643-21713687)
[»] chr3 (45 HSPs)
chr3 (29-253)||(39146443-39146667)
chr3 (27-253)||(26948801-26949027)
chr3 (26-253)||(20671252-20671479)
chr3 (26-253)||(36076453-36076680)
chr3 (27-253)||(4584434-4584660)
chr3 (24-253)||(43363608-43363837)
chr3 (29-253)||(31488414-31488638)
chr3 (26-253)||(12264203-12264430)
chr3 (26-253)||(38653926-38654153)
chr3 (27-253)||(49672565-49672791)
chr3 (26-253)||(45557883-45558110)
chr3 (27-253)||(1941720-1941946)
chr3 (27-253)||(21098307-21098533)
chr3 (27-253)||(34121358-34121584)
chr3 (27-253)||(49478211-49478437)
chr3 (26-253)||(49506348-49506575)
chr3 (27-253)||(3898425-3898651)
chr3 (32-253)||(55041588-55041815)
chr3 (27-253)||(54073030-54073259)
chr3 (69-253)||(24119210-24119394)
chr3 (27-211)||(40014653-40014837)
chr3 (59-193)||(26051334-26051469)
chr3 (26-129)||(6460167-6460269)
chr3 (185-253)||(26052236-26052304)
chr3 (210-253)||(1941990-1942033)
chr3 (210-253)||(3898338-3898381)
chr3 (210-253)||(12264115-12264158)
chr3 (210-253)||(20671166-20671209)
chr3 (210-253)||(21098219-21098262)
chr3 (210-253)||(26052349-26052392)
chr3 (210-253)||(26948689-26948732)
chr3 (210-253)||(31488329-31488372)
chr3 (210-253)||(34121271-34121314)
chr3 (210-253)||(38654198-38654241)
chr3 (210-253)||(43363881-43363924)
chr3 (210-253)||(49478124-49478167)
chr3 (210-253)||(49672478-49672521)
chr3 (210-253)||(55041858-55041901)
chr3 (212-253)||(36076723-36076764)
chr3 (210-253)||(24119126-24119169)
chr3 (210-253)||(39146363-39146406)
chr3 (210-253)||(45558153-45558196)
chr3 (27-81)||(13364022-13364076)
chr3 (36-92)||(37099708-37099764)
chr3 (152-188)||(41798957-41798993)
[»] chr6 (35 HSPs)
chr6 (27-253)||(15044725-15044951)
chr6 (27-252)||(13533771-13533996)
chr6 (24-253)||(17202435-17202664)
chr6 (25-253)||(3592896-3593124)
chr6 (27-253)||(2005431-2005657)
chr6 (25-253)||(12597263-12597491)
chr6 (27-253)||(10584728-10584954)
chr6 (27-253)||(28099597-28099823)
chr6 (29-253)||(19997668-19997892)
chr6 (27-253)||(33645945-33646171)
chr6 (24-253)||(2266771-2267008)
chr6 (131-253)||(8539603-8539725)
chr6 (94-253)||(17594819-17594979)
chr6 (26-152)||(1405562-1405688)
chr6 (142-253)||(25448752-25448863)
chr6 (63-166)||(33035523-33035626)
chr6 (27-82)||(8539727-8539782)
chr6 (210-253)||(2266684-2266727)
chr6 (210-253)||(10584996-10585039)
chr6 (210-253)||(12597535-12597578)
chr6 (210-253)||(15044639-15044682)
chr6 (210-253)||(17202348-17202391)
chr6 (210-253)||(17594733-17594776)
chr6 (210-253)||(19997580-19997623)
chr6 (210-253)||(28099868-28099911)
chr6 (210-253)||(33645858-33645901)
chr6 (26-68)||(162668-162710)
chr6 (210-253)||(2005348-2005391)
chr6 (210-253)||(3589064-3589107)
chr6 (210-253)||(3592087-3592130)
chr6 (210-253)||(3592812-3592855)
chr6 (210-253)||(25448665-25448708)
chr6 (27-71)||(6300709-6300753)
chr6 (27-71)||(6307519-6307563)
chr6 (210-246)||(8539523-8539559)
[»] chr4 (42 HSPs)
chr4 (26-252)||(16904951-16905177)
chr4 (27-253)||(33139471-33139697)
chr4 (29-253)||(45976992-45977216)
chr4 (29-253)||(46256037-46256261)
chr4 (26-252)||(35760585-35760811)
chr4 (21-253)||(16917882-16918114)
chr4 (27-253)||(37590804-37591030)
chr4 (36-253)||(44376088-44376305)
chr4 (26-253)||(52434627-52434854)
chr4 (27-253)||(48118534-48118757)
chr4 (27-253)||(30824922-30825148)
chr4 (24-253)||(31965966-31966195)
chr4 (26-253)||(41387129-41387356)
chr4 (25-253)||(39058355-39058583)
chr4 (25-253)||(53143260-53143488)
chr4 (27-253)||(37651669-37651895)
chr4 (27-253)||(12090459-12090686)
chr4 (50-253)||(31628510-31628713)
chr4 (26-249)||(47142799-47143022)
chr4 (51-253)||(52098214-52098417)
chr4 (78-253)||(45782480-45782655)
chr4 (29-253)||(54624960-54625177)
chr4 (90-253)||(50229769-50229933)
chr4 (67-121)||(50229712-50229766)
chr4 (24-68)||(18209699-18209743)
chr4 (210-253)||(12090730-12090773)
chr4 (210-253)||(16905218-16905261)
chr4 (210-253)||(16918158-16918201)
chr4 (210-253)||(30825192-30825235)
chr4 (210-253)||(31966239-31966282)
chr4 (210-253)||(39058622-39058665)
chr4 (210-253)||(45977264-45977307)
chr4 (210-253)||(47143070-47143113)
chr4 (210-253)||(48118802-48118845)
chr4 (210-253)||(52098460-52098503)
chr4 (210-253)||(52434540-52434583)
chr4 (210-253)||(53143534-53143577)
chr4 (210-253)||(54624879-54624922)
chr4 (213-253)||(50229979-50230019)
chr4 (210-253)||(41387042-41387085)
chr4 (210-253)||(44376347-44376390)
chr4 (210-247)||(45782697-45782734)
[»] chr8 (58 HSPs)
chr8 (25-253)||(11725193-11725421)
chr8 (29-253)||(18568868-18569092)
chr8 (26-252)||(28582859-28583085)
chr8 (27-253)||(18841907-18842133)
chr8 (27-249)||(44836916-44837138)
chr8 (26-253)||(30473883-30474110)
chr8 (27-253)||(15961135-15961361)
chr8 (27-253)||(24408879-24409105)
chr8 (51-253)||(39257446-39257648)
chr8 (24-253)||(10477940-10478169)
chr8 (27-248)||(35122322-35122543)
chr8 (25-253)||(18997703-18997931)
chr8 (26-253)||(18175384-18175611)
chr8 (26-253)||(32110860-32111087)
chr8 (50-253)||(40026803-40027006)
chr8 (26-253)||(44832185-44832412)
chr8 (27-253)||(6299020-6299246)
chr8 (24-253)||(995812-996041)
chr8 (50-253)||(28274237-28274440)
chr8 (32-253)||(11142464-11142691)
chr8 (66-253)||(19412834-19413022)
chr8 (78-253)||(19240666-19240841)
chr8 (78-253)||(19313850-19314025)
chr8 (59-253)||(18210656-18210850)
chr8 (26-221)||(39997726-39997921)
chr8 (90-253)||(24004790-24004953)
chr8 (142-253)||(23353692-23353803)
chr8 (59-253)||(25875322-25875525)
chr8 (196-253)||(18481929-18481986)
chr8 (27-82)||(23353622-23353677)
chr8 (210-253)||(39997665-39997708)
chr8 (27-76)||(19241006-19241055)
chr8 (27-76)||(19314190-19314239)
chr8 (210-253)||(6299290-6299333)
chr8 (210-253)||(10477853-10477896)
chr8 (210-253)||(11142381-11142424)
chr8 (210-253)||(11725106-11725149)
chr8 (210-253)||(18175297-18175340)
chr8 (210-253)||(18997616-18997659)
chr8 (210-253)||(19240580-19240623)
chr8 (210-253)||(19313764-19313807)
chr8 (210-253)||(19412752-19412795)
chr8 (210-253)||(23353846-23353889)
chr8 (210-253)||(24408795-24408838)
chr8 (210-253)||(30474153-30474196)
chr8 (210-253)||(32111131-32111174)
chr8 (210-253)||(35122585-35122628)
chr8 (210-253)||(39997580-39997623)
chr8 (210-253)||(44832457-44832500)
chr8 (210-253)||(44836824-44836867)
chr8 (210-252)||(18210893-18210935)
chr8 (210-253)||(996085-996128)
chr8 (210-253)||(18841829-18841872)
chr8 (210-253)||(25875567-25875610)
chr8 (210-253)||(28582777-28582820)
chr8 (210-249)||(39257362-39257401)
chr8 (22-64)||(40169715-40169757)
chr8 (152-188)||(4476885-4476921)
[»] chr2 (32 HSPs)
chr2 (25-253)||(8700264-8700492)
chr2 (26-249)||(19596362-19596585)
chr2 (29-253)||(31424012-31424236)
chr2 (27-253)||(41664513-41664739)
chr2 (29-253)||(26231261-26231485)
chr2 (26-253)||(6120555-6120782)
chr2 (26-253)||(18351554-18351781)
chr2 (27-253)||(41663240-41663466)
chr2 (27-253)||(42055202-42055428)
chr2 (27-253)||(44902085-44902310)
chr2 (24-253)||(20544828-20545057)
chr2 (58-253)||(999262-999457)
chr2 (27-253)||(36279455-36279680)
chr2 (27-253)||(34007714-34007935)
chr2 (27-253)||(42441963-42442193)
chr2 (68-249)||(16214831-16215012)
chr2 (26-180)||(27944795-27944949)
chr2 (52-193)||(692227-692368)
chr2 (210-253)||(19596634-19596677)
chr2 (210-253)||(6120467-6120510)
chr2 (210-253)||(16214741-16214784)
chr2 (210-253)||(18351467-18351510)
chr2 (210-253)||(26231527-26231570)
chr2 (210-253)||(31423924-31423967)
chr2 (210-253)||(34007980-34008023)
chr2 (210-253)||(41663152-41663195)
chr2 (210-253)||(42441876-42441919)
chr2 (210-253)||(999500-999543)
chr2 (210-253)||(36279723-36279766)
chr2 (210-253)||(41664426-41664469)
chr2 (210-253)||(44901998-44902041)
chr2 (27-71)||(25889039-25889083)
[»] chr1 (39 HSPs)
chr1 (26-253)||(9216034-9216261)
chr1 (24-253)||(34888683-34888912)
chr1 (27-253)||(4266384-4266610)
chr1 (27-253)||(38913747-38913973)
chr1 (24-253)||(23482704-23482933)
chr1 (32-253)||(35614070-35614291)
chr1 (26-253)||(7333947-7334174)
chr1 (27-253)||(18706509-18706734)
chr1 (27-253)||(38444634-38444860)
chr1 (26-253)||(18855232-18855458)
chr1 (27-253)||(2951366-2951592)
chr1 (27-239)||(1231813-1232025)
chr1 (67-253)||(39727983-39728169)
chr1 (51-253)||(50151063-50151265)
chr1 (27-253)||(52687114-52687339)
chr1 (66-253)||(35614819-35615005)
chr1 (70-248)||(19764593-19764771)
chr1 (27-180)||(31018200-31018353)
chr1 (29-180)||(50326077-50326228)
chr1 (122-253)||(2590338-2590468)
chr1 (142-253)||(19768467-19768578)
chr1 (27-121)||(29942153-29942247)
chr1 (60-138)||(5061341-5061419)
chr1 (27-76)||(52957056-52957105)
chr1 (210-253)||(1231725-1231768)
chr1 (210-253)||(2951636-2951679)
chr1 (210-253)||(4266297-4266340)
chr1 (210-253)||(18706773-18706816)
chr1 (210-253)||(19764814-19764857)
chr1 (210-253)||(19768382-19768425)
chr1 (210-253)||(23482972-23483015)
chr1 (210-253)||(35614734-35614777)
chr1 (210-253)||(38914017-38914060)
chr1 (210-253)||(52036310-52036353)
chr1 (24-70)||(2590466-2590512)
chr1 (213-253)||(7333863-7333903)
chr1 (210-253)||(35613984-35614027)
chr1 (210-253)||(38444549-38444592)
chr1 (210-253)||(52687381-52687424)
[»] chr5 (45 HSPs)
chr5 (27-253)||(20655049-20655275)
chr5 (26-253)||(5479199-5479426)
chr5 (27-253)||(33375765-33375993)
chr5 (25-253)||(38246863-38247091)
chr5 (26-253)||(34107337-34107564)
chr5 (27-253)||(20874691-20874917)
chr5 (27-253)||(34110655-34110881)
chr5 (25-253)||(1395992-1396220)
chr5 (25-253)||(16526304-16526532)
chr5 (26-253)||(10729441-10729668)
chr5 (66-253)||(27647933-27648120)
chr5 (36-253)||(25099245-25099462)
chr5 (36-253)||(25158335-25158552)
chr5 (26-253)||(2398941-2399166)
chr5 (27-253)||(17373161-17373390)
chr5 (49-253)||(24223186-24223390)
chr5 (63-253)||(29275627-29275817)
chr5 (69-253)||(6940545-6940729)
chr5 (62-253)||(33570342-33570533)
chr5 (84-253)||(1394543-1394712)
chr5 (78-253)||(14141158-14141333)
chr5 (86-253)||(17913744-17913911)
chr5 (27-170)||(40177127-40177270)
chr5 (210-253)||(1395907-1395950)
chr5 (210-253)||(2399210-2399253)
chr5 (210-253)||(5479115-5479158)
chr5 (210-253)||(6940768-6940811)
chr5 (27-82)||(8179753-8179808)
chr5 (210-253)||(10729712-10729755)
chr5 (210-253)||(14141377-14141420)
chr5 (210-253)||(16526577-16526620)
chr5 (210-253)||(17373434-17373477)
chr5 (210-253)||(20874604-20874647)
chr5 (210-253)||(24223434-24223477)
chr5 (210-253)||(27647845-27647888)
chr5 (210-253)||(33570578-33570621)
chr5 (210-253)||(34107608-34107651)
chr5 (210-253)||(34110566-34110609)
chr5 (210-253)||(38247135-38247178)
chr5 (210-253)||(40177033-40177076)
chr5 (210-253)||(1394750-1394793)
chr5 (210-253)||(25158594-25158637)
chr5 (210-253)||(33375680-33375723)
chr5 (25-66)||(19391258-19391299)
chr5 (213-253)||(29275540-29275580)
[»] scaffold0173 (1 HSPs)
scaffold0173 (24-253)||(19350-19579)
[»] scaffold0031 (1 HSPs)
scaffold0031 (25-253)||(46277-46505)
[»] scaffold0022 (2 HSPs)
scaffold0022 (27-253)||(149050-149276)
scaffold0022 (210-253)||(149318-149361)
[»] scaffold0515 (1 HSPs)
scaffold0515 (27-198)||(6061-6232)
[»] scaffold0306 (1 HSPs)
scaffold0306 (27-198)||(6071-6242)
[»] scaffold0836 (1 HSPs)
scaffold0836 (27-179)||(5278-5430)


Alignment Details
Target: chr7 (Bit Score: 183; Significance: 5e-99; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 21670210 - 21669984
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  21670210 actagactttccacccgtgctgccgcacaggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtgg 21670111  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21670110 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 21670011  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  21670010 gttaaaattatatgtcaatgttatatt 21669984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 16376543 - 16376771
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  16376543 aaactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgt 16376642  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  16376643 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattctt 16376742  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||    
T  16376743 ttgttaaaattatatgtcaatgttatatt 16376771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 43933546 - 43933770
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  43933546 tagactttccacccgtgctaccgcaagggtcatatacattgtagatgtagtagacaaaaaaaaatctcaatgcatataaaagagaataaaatatgtggtc 43933645  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    | |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43933646 ccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 43933745  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  43933746 taaaattatatgtcaatgttatatt 43933770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 21656857 - 21656631
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  21656857 actagactttccacccgtgctaccacacgggtcatatacactgtagatgaagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtgg 21656758  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21656757 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 21656658  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  21656657 gttaaaattatatgtcaatgttatatt 21656631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 40969122 - 40968894
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||| ||||    
T  40969122 aaactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacacaaacaaatctcaatgcatatcaaagagaataaaacatgt 40969023  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  40969022 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattctt 40968923  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||    
T  40968922 ttgttaaaattatatgtcaatgttatatt 40968894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 13786399 - 13786173
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  13786399 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtgg 13786300  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||| ||||    
T  13786299 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgcgtcttacttcattttttt 13786200  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  13786199 gttaaaattatatgtcaatgttatatt 13786173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 15109664 - 15109891
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| |||||| ||||| || |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  15109664 aactagactttccacccgtgctatcgcaccggacatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 15109763  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||| |||||||  |||||| ||||||||||||||||| |||||||||||||||||||    
T  15109764 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcatcttaaaagtattaatttttatcaattgtgtgttacttcattcttt 15109863  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  15109864 tgttaaaattatatgtcaatgttatatt 15109891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 21804571 - 21804798
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  21804571 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 21804670  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  21804671 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 21804770  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  21804771 tgttaaaattatatgtcaatattatatt 21804798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 27903416 - 27903643
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  27903416 aactagactttccacccgtgctgccgcacgggtcatatatattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtg 27903515  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  27903516 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttaccaatcgtgtcttacttcattcttt 27903615  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||| |||||||||||||||||    
T  27903616 tgttaaaattctatgtcaatgttatatt 27903643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 42242153 - 42242380
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  42242153 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 42242252  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  42242253 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 42242352  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  42242353 tgttaaaattatatgtcaatattatatt 42242380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 38163339 - 38163565
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  38163339 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 38163438  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  38163439 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 38163538  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  38163539 gttaaaattatatgtcaatattatatt 38163565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 3840639 - 3840867
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  3840639 aaactagactttccacccgtgctgccgcacgagtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 3840738  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  3840739 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 3840838  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||| |||||||    
T  3840839 ttgttaaaattatatgtcaatattatatt 3840867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 33916946 - 33917173
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  33916946 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 33917045  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||| ||||||||||    
T  33917046 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttatttcattcttt 33917145  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  33917146 tgttaaaattatatgtcaatattatatt 33917173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 43 - 253
Target Start/End: Complemental strand, 24924292 - 24924082
Alignment:
Q  43 gtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactg 142  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||   |    
T  24924292 gtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgtag 24924193  T
Q  143 atgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtc 242  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24924192 atgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaaattttatcaatcgtgtgttacttcattcttttgttaaaattatatgtc 24924093  T
Q  243 aatgttatatt 253  Q
    |||||||||||    
T  24924092 aatgttatatt 24924082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 21342052 - 21341826
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||| |||||||||||||||||||||||||||||||| |||||||| |    
T  21342052 actagactttccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtag 21341953  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||  |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  21341952 tctcaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 21341853  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  21341852 gttaaaattatatgtcaatattatatt 21341826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 27138528 - 27138754
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||| ||||||||||||| ||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  27138528 actagactttccacccgtgctgccgcacaggtcatatacattctagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 27138627  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  27138628 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 27138727  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  27138728 gttaaaattatatgtcaatattatatt 27138754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 31373688 - 31373459
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||| ||||| |||||||||||||||||||||||||| |||||||    
T  31373688 taaactagactttccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 31373589  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | ||||||| |||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||| ||||||||||||    
T  31373588 tggtcccaaatatatgcagatgttgaaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtattacttcattct 31373489  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  31373488 tttgttaaaattatatgtcaatattatatt 31373459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 17178237 - 17178464
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||||| ||||| |||||||||| ||||||||||||||| ||||||||||    
T  17178237 actagactttccacccgtgctgccgcatgggtcatatacattgtagatatagtagacaaaaacaaatctcaattcatatcaaagagaatgaaatatgtgg 17178336  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattca-ctttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| ||||||| |   |||||||||||||||||||||||| |||||||||||||||||    
T  17178337 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccaaaaaaaatattaatttttatcaatcgggtgttacttcattcttt 17178436  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  17178437 tgttaaaattatatgtcaatattatatt 17178464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 59 - 253
Target Start/End: Original strand, 21753524 - 21753718
Alignment:
Q  59 catatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaac 158  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||  |||||||||    
T  21753524 catatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtctcaaatatatgcagatgttaaaattcgaac 21753623  T
Q  159 ctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    || |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21753624 cttagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 21753718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 39030276 - 39030446
Alignment:
Q  51 gcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttgga 150  Q
    |||||||||||||| ||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  39030276 gcacgggtcatatatattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttgga 39030375  T
Q  151 attcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcatt 221  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  39030376 attcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcatt 39030446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 31096748 - 31096703
Alignment:
Q  208 tgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  31096748 tgtgttacttcattcttttgttaaaattatatgtcaatattatatt 31096703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 3840912 - 3840955
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  3840912 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 3840955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 16376812 - 16376855
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| ||||||||||||||||||||||||    
T  16376812 tgttacttcattattttgtaaaaattatatgtcaatgttatatt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 17178508 - 17178551
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  17178508 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17178551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 21341780 - 21341737
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  21341780 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21341737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 21656590 - 21656547
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  21656590 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21656547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 21669938 - 21669895
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  21669938 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21669895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 21804842 - 21804885
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  21804842 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21804885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 27138798 - 27138841
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  27138798 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 27138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 31373413 - 31373370
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  31373413 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 31373370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 33917217 - 33917260
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  33917217 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 33917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 42242424 - 42242467
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  42242424 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 42242467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 43933815 - 43933856
Alignment:
Q  212 ttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  43933815 ttacttcattcttttgtaaaaattatatgttaatgttatatt 43933856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 24924041 - 24924001
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttat 250  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  24924041 tgttacttcattcttttgtaaaaattatatgttaatgttat 24924001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 15109930 - 15109973
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  15109930 tgttacttcattcttttgtaaaaattatatgttaatattatatt 15109973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 21753760 - 21753803
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  21753760 tgttacttcattattttgtaaaaattatatgttaatgttatatt 21753803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 27903686 - 27903729
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  27903686 tgttacttcattattttgtaaaaattatatgttaatgttatatt 27903729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 31096658 - 31096615
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| | |||||||||| |||||||||||    
T  31096658 tgttacttcattcttttgtaagaattatatgttaatgttatatt 31096615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 21681119 - 21681073
Alignment:
Q  46 ctaccgcacgggtcatatacattgtagatgtggtagataaaaataaa 92  Q
    |||||||||||||||||||||| ||| |||| ||||| |||||||||    
T  21681119 ctaccgcacgggtcatatacatcgtaaatgtagtagacaaaaataaa 21681073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 21713687 - 21713643
Alignment:
Q  43 gtgctaccgcacgggtcatatacattgtagatgtggtagataaaa 87  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||||    
T  21713687 gtgctaccgcatgggtcatatacaccgtagatgtagtagataaaa 21713643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 8e-98; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 29 - 253
Target Start/End: Complemental strand, 39146667 - 39146443
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39146667 tagactttccatctgtgttgccgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 39146568  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    | |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  39146567 ccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgt 39146468  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  39146467 taaaattatatgtcaatgttatatt 39146443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 26949027 - 26948801
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  26949027 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 26948928  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  26948927 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttacttcattctttt 26948828  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  26948827 gttaaaattatatgtcaatgttatatt 26948801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 20671479 - 20671252
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| || |||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  20671479 aactagactttccacccgtgctgccacacgagtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 20671380  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20671379 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 20671280  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  20671279 tgttaaaattatatgtcaatgttatatt 20671252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 36076453 - 36076680
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||||| |||||||||    
T  36076453 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtg 36076552  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | ||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36076553 gtcccaaatatatgcagatgttggaattcgaacttcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 36076652  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  36076653 tgttaaaattatatgtcaatgttatatt 36076680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 4584434 - 4584660
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  4584434 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 4584533  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  4584534 tcccaaatatatgcagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattctttt 4584633  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  4584634 gttaaaattatatgtcaatgttatatt 4584660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 43363608 - 43363837
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  43363608 taaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 43363707  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  43363708 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 43363807  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  43363808 tttgttaaaattatatgtcaatattatatt 43363837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 29 - 253
Target Start/End: Complemental strand, 31488638 - 31488414
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||| | ||||| |||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||    
T  31488638 tagactttccatccgtgctgccgcacgggttatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgttgtc 31488539  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    | |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  31488538 ccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactttattcttttgt 31488439  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  31488438 taaaattatatgtcaatgttatatt 31488414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 12264430 - 12264203
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  12264430 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 12264331  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  12264330 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 12264231  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  12264230 tgttaaaattatatgtcaatattatatt 12264203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 38653926 - 38654153
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  38653926 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 38654025  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  38654026 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 38654125  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  38654126 tgttaaaattatatgtcaatattatatt 38654153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 49672791 - 49672565
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  49672791 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 49672692  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  49672691 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 49672592  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  49672591 gttaaaattatatgtcaatattatatt 49672565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 45557883 - 45558110
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||||||| || ||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  45557883 aactagactttccaccagtgctaccgtacaggtcatatatattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 45557982  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| || ||||| | ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  45557983 gtcccaagtatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtattacttcattcttt 45558082  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  45558083 tgttaaaattatatgtcaatattatatt 45558110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 1941720 - 1941946
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  1941720 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 1941819  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||||||||||||||||||||| |||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  1941820 tcccaaatatatgcagatgttggaattcgaacctcagacatcacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 1941919  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  1941920 gttaaaattatatgtcaatattatatt 1941946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 21098533 - 21098307
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  21098533 actagactttccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 21098434  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  21098433 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 21098334  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  21098333 gttaaaattatatgtcaatattatatt 21098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 34121584 - 34121358
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||| ||||    
T  34121584 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatacgtgg 34121485  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  34121484 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 34121385  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  34121384 gttaaaattatatgtcaatattatatt 34121358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 49478437 - 49478211
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||||||| ||||| ||||||||||| || ||||||||||| |||||||||| ||||||||||| ||| ||||||||||    
T  49478437 actagactttccacccgtgctgccgcacgagtcatttacattgtagacgtagtagataaaaacaaatctcaatacatatcaaagataatgaaatatgtgg 49478338  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| |  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49478337 tcccaaatatatgcaaatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 49478238  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
     ||||||||||||||||||||||||||    
T  49478237 attaaaattatatgtcaatgttatatt 49478211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 49506348 - 49506575
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| || || |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  49506348 aactagactttccacccgtactgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 49506447  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||| |||||||||||||    
T  49506448 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtacttcattcttt 49506547  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  49506548 tgttaaaattatatgtcaatattatatt 49506575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 3898651 - 3898425
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||| ||||||||| ||||||||||    
T  3898651 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtgg 3898552  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||| ||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  3898551 tcccaaatatatgcagatgttggaatttgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 3898452  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  3898451 gttaaaattatatgtcaatattatatt 3898425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 32 - 253
Target Start/End: Original strand, 55041588 - 55041815
Alignment:
Q  32 actttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtccta 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||| | |    
T  55041588 actttccacccgtgctaccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttcca 55041687  T
Q  132 aatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatatta------atttttatcaatcgtgtgttacttcattcttt 225  Q
    ||||||| | |||||| ||||||||||||||||||||||| |||||||| ||||||||||||      |||||||||||||||||||||||||| |||||    
T  55041688 aatatatgcagatgtttgaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtgttacttcactcttt 55041787  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  55041788 tgttaaaattatatgtcaatgttatatt 55041815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 54073259 - 54073030
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatata---cattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    ||||||||||||||| ||||| ||||||||||||||||   |||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  54073259 actagactttccacccgtgctgccgcacgggtcatatagtacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 54073160  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  54073159 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 54073060  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  54073059 tttgttaaaattatatgtcaatattatatt 54073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 253
Target Start/End: Complemental strand, 24119394 - 24119210
Alignment:
Q  69 gtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacacc 168  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||| ||| |||||| |||||| |||||||| | ||||||||||||| |||||||||||||    
T  24119394 gtagatgtagtagacaaaaacaaatctcaatgcatattaaagataatgaaatatatggtcccaaatatatgcagatgttggaattcaaacctcagacacc 24119295  T
Q  169 acatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24119294 acacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 24119210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 40014653 - 40014837
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| |  || | ||||| |||||||||||||||||||||||||| ||||||||||    
T  40014653 actagactttccacccgtgctgccgcacgggtcatatacattgtagatataataaacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 40014752  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtg 211  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||    
T  40014753 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtg 40014837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 26051334 - 26051469
Alignment:
Q  59 catatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggt-cctaaatatatactgatgttggaattcgaa 157  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||| || |||||||| |||| |||||||||||||    
T  26051334 catatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccccaaatatatgctgaggttggaattcgaa 26051433  T
Q  158 cctcagacaccacatttattcactttaaaaatatta 193  Q
    |||||||||||||  |||||||| ||||||||||||    
T  26051434 cctcagacaccacgcttattcaccttaaaaatatta 26051469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 6460167 - 6460269
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||| |||||||||||||||    
T  6460167 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatacatatcaaa-agaataaaatatgtg 6460265  T
Q  126 gtcc 129  Q
    ||||    
T  6460266 gtcc 6460269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 26052236 - 26052304
Alignment:
Q  185 aaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26052236 aaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 26052304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 1941990 - 1942033
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  1941990 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 1942033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 3898381 - 3898338
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  3898381 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 3898338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 12264158 - 12264115
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  12264158 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 12264115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 20671209 - 20671166
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  20671209 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 20671166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 21098262 - 21098219
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  21098262 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21098219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 26052349 - 26052392
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  26052349 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 26052392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 26948732 - 26948689
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  26948732 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 26948689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 31488372 - 31488329
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  31488372 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 31488329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 34121314 - 34121271
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  34121314 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 34121271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 38654198 - 38654241
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  38654198 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 38654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 43363881 - 43363924
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  43363881 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 43363924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 49478167 - 49478124
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  49478167 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 49478124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 49672521 - 49672478
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  49672521 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 49672478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 55041858 - 55041901
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  55041858 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 55041901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 36076723 - 36076764
Alignment:
Q  212 ttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  36076723 ttacttcattcttttgtaaaaattatatgttaatgttatatt 36076764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 24119169 - 24119126
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| || ||||||||    
T  24119169 tgttacttcattcttttgtaaaaattatatgttaaagttatatt 24119126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 39146406 - 39146363
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  39146406 tgttacttcattattttgtaaaaattatatgttaatgttatatt 39146363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 45558153 - 45558196
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  45558153 tgttacttcatttttttgtaaaaattatatgttaatgttatatt 45558196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 13364022 - 13364076
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtag 81  Q
    ||||||| || ||||| |||| ||||||||||||||||||||||| |||| ||||    
T  13364022 actagacatttcacctctgctgccgcacgggtcatatacattgtatatgtagtag 13364076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 37099764 - 37099708
Alignment:
Q  36 tccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaa 92  Q
    |||||| ||||| |||||||||||||||||||||||  ||| ||||| |||| ||||    
T  37099764 tccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaagtaaa 37099708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 41798993 - 41798957
Alignment:
Q  152 ttcgaacctcagacaccacatttattcactttaaaaa 188  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  41798993 ttcgaacttcagacacctcatttattcactttaaaaa 41798957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 15044951 - 15044725
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  15044951 actagactttccacccgtgctgccgcacaggtcatatacattgtagatgtagtagacaaaaataaatttcaatgcatatcaaagagaataaaatatgtgg 15044852  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  15044851 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgttttacttcattctttt 15044752  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  15044751 gttaaaattatatgtcaatgttatatt 15044725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 13533996 - 13533771
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  13533996 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaatgtatatcaaagagaatgaaatatgtgg 13533897  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13533896 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 13533797  T
Q  227 gttaaaattatatgtcaatgttatat 252  Q
    ||||||||||||||||||||||||||    
T  13533796 gttaaaattatatgtcaatgttatat 13533771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 17202664 - 17202435
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| ||||||  |||||||||||||||||||| ||||| ||| | ||||| |||||||||||||||||||| |||||||    
T  17202664 taaactagactttccacccgtgctgccgcacaagtcatatacattgtagatgtagtagacaaatacaaatcacaatgcatatcaaagagaatgaaatatg 17202565  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17202564 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattct 17202465  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||||    
T  17202464 tttgttaaaattatatgtcaatgttatatt 17202435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 3593124 - 3592896
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  3593124 aaactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatccaagagaatgaaatatgt 3593025  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    | ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  3593024 gatcccaaatatattcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatgaatcgtgtgttacttcattctt 3592925  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||| |||||||||||||    
T  3592924 ttgttaaaattatatctcaatgttatatt 3592896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 2005657 - 2005431
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||  ||||  |||||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  2005657 actagactttccactcgtgcggccgcacgggtcatatacattgtagatgcagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtgg 2005558  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    || ||||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  2005557 tcttaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattctttt 2005458  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  2005457 gttaaaattatatgtcaatgttatatt 2005431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 12597263 - 12597491
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  12597263 aaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 12597362  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  12597363 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 12597462  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||| |||||||    
T  12597463 ttgttaaaattatatgtcaatattatatt 12597491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 10584728 - 10584954
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||  | |||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||| ||||||||||    
T  10584728 actagactttccacccgtgctgccatatgggtcatatacattgtagatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtgg 10584827  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10584828 tcccaaatatatgcagatgttggaattcgaacctcagacactacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 10584927  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  10584928 gttaaaattatatgtcaatgttatatt 10584954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 28099597 - 28099823
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  28099597 actagactttccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 28099696  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| |||||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  28099697 tcccaaatatatgctgatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 28099796  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  28099797 gttaaaattatatgtcaatattatatt 28099823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 29 - 253
Target Start/End: Complemental strand, 19997892 - 19997668
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  19997892 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 19997793  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    | |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  19997792 ccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 19997693  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||| |||||||    
T  19997692 taaaattatatgtcaatattatatt 19997668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 33646171 - 33645945
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  33646171 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 33646072  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    | | |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  33646071 ttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 33645972  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  33645971 gttaaaattatatgtcaatattatatt 33645945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 2267008 - 2266771
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  2267008 taaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 2266909  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagaca--------ccacatttattcactttaaaaatattaatttttatcaatcgtgtgttac 215  Q
    |||||| |||||||| | |||||||||||||||||||||||||        ||||  ||||||||   ||||||||||||||||||||||||||||||||    
T  2266908 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttac 2266809  T
Q  216 ttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||| |||||||    
T  2266808 ttcattcttttgttaaaattatatgtcaatattatatt 2266771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 8539725 - 8539603
Alignment:
Q  131 aaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgtta 230  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8539725 aaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgtta 8539626  T
Q  231 aaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||    
T  8539625 aaattatatgtcaatgttatatt 8539603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 94 - 253
Target Start/End: Complemental strand, 17594979 - 17594819
Alignment:
Q  94 ctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatatt- 192  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||   ||||||| ||||| ||| |||||||||||| |||||||| |||||||||||     
T  17594979 ctcaatgcatatcaaagaaaatgaaatatgtggtcccaaatatatggagatgttgaaattcaaacttcagacaccacacttattcaccttaaaaatatta 17594880  T
Q  193 aatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17594879 aatttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 17594819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 1405562 - 1405688
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||||||| |||||||||    
T  1405562 aactagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaatgtatattaaagagaatgaaatatgtg 1405661  T
Q  126 gtcctaaatatatactgatgttggaat 152  Q
     ||| |||||||| | |||||||||||    
T  1405662 atcccaaatatatgcagatgttggaat 1405688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 253
Target Start/End: Complemental strand, 25448863 - 25448752
Alignment:
Q  142 gatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgt 241  Q
    |||||||||||||||| ||||||||||||  ||||||||   ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25448863 gatgttggaattcgaaactcagacaccacgcttattcaccaaaaatatattaatttttatcaatcgtgtgttacttcatttttttgttaaaattatatgt 25448764  T
Q  242 caatgttatatt 253  Q
    |||| |||||||    
T  25448763 caatattatatt 25448752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 33035626 - 33035523
Alignment:
Q  63 tacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctca 162  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||||| | |||| ||||||||||| ||||    
T  33035626 tacattgtagatgtagtagacaaaaacaaatctcaatgcatgtcaaagagaataaaacatgtggtctcaaatatatgcagatgctggaattcgaatctca 33035527  T
Q  163 gaca 166  Q
    ||||    
T  33035526 gaca 33035523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 8539782 - 8539727
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtaga 82  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  8539782 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtaga 8539727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 2266727 - 2266684
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  2266727 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 2266684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 10584996 - 10585039
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  10584996 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 10585039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 12597535 - 12597578
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  12597535 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 12597578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 15044682 - 15044639
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  15044682 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 15044639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 17202391 - 17202348
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  17202391 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17202348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 17594776 - 17594733
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  17594776 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17594733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 19997623 - 19997580
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  19997623 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19997580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 28099868 - 28099911
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  28099868 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 28099911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 33645901 - 33645858
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  33645901 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 33645858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 162668 - 162710
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacatt 68  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  162668 aactagactttccacccgtgctgccgcacgggtcatatacatt 162710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 2005391 - 2005348
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  2005391 tgttacttcattattttgtaaaaattatatgttaatgttatatt 2005348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 3589107 - 3589064
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||| |||||||| |||||||||||| |||||||||||    
T  3589107 tgttacttcactcttttgtaaaaattatatgttaatgttatatt 3589064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 3592130 - 3592087
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||    
T  3592130 tgttatttcattcttttgtaaaaattatatgttaatgttatatt 3592087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 3592855 - 3592812
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||    
T  3592855 tgttacttcattcttttgtaaaaattatatgttaatgttgtatt 3592812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 25448708 - 25448665
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||| |||||||||| |||||||||||| |||||||||||    
T  25448708 tgttactttattcttttgtaaaaattatatgttaatgttatatt 25448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 6300709 - 6300753
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgta 71  Q
    |||||||| | |||| ||||| |||||||||||||||||||||||    
T  6300709 actagactatgcacccgtgctgccgcacgggtcatatacattgta 6300753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 6307519 - 6307563
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgta 71  Q
    |||||||| | |||| ||||| |||||||||||||||||||||||    
T  6307519 actagactatgcacccgtgctgccgcacgggtcatatacattgta 6307563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 8539559 - 8539523
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatg 246  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  8539559 tgttacttcattcttttgtaaaaattatatgttaatg 8539523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 1e-96; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 26 - 252
Target Start/End: Original strand, 16904951 - 16905177
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  16904951 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 16905050  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  16905051 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttt 16905150  T
Q  226 tgttaaaattatatgtcaatgttatat 252  Q
    |||||||||||||||||||||||||||    
T  16905151 tgttaaaattatatgtcaatgttatat 16905177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 33139471 - 33139697
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||| |    
T  33139471 actagactttccacccgtgctgccgcacgggtcatatacattgtagatttagtagacaaaaacaaatctcaatgcatatcaaagagaattaaatatgttg 33139570  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  33139571 tcccaaatatatgcagatgttggaattcgaacctcagacaccacatttattcaccttaaaaatattaatttttatcaatcgtgtattacttcattctttt 33139670  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  33139671 gttaaaattatatgtcaatgttatatt 33139697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 45976992 - 45977216
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||| | ||||| | ||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  45976992 tagactttccatccgtgctgctgcacgggtcatatacatcgtagatgtagtagataaaaataaatatcaatgcatatcaaagagaatgaaatatgtggtc 45977091  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    |||||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  45977092 ctaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgt 45977191  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  45977192 taaaattatatgtcaatgttatatt 45977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 29 - 253
Target Start/End: Complemental strand, 46256261 - 46256037
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  46256261 tagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtggtc 46256162  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    | |||||||| | |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||||||||||||||    
T  46256161 ccaaatatatgcagatgttggaattggaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtatcttacttcattcttttgt 46256062  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  46256061 taaaattatatgtcaatgttatatt 46256037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 26 - 252
Target Start/End: Complemental strand, 35760811 - 35760585
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  35760811 aactagattttccacccgtgctgccgcacgagtcatatacattgtagatatagtagataaaaataaatctcaatgtatatcaaagagaatgaaatatgtg 35760712  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35760711 gtcccaaatatatgcagatgttggaattcgaacctcaaacaccacaattattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 35760612  T
Q  226 tgttaaaattatatgtcaatgttatat 252  Q
    |||||||||||||||||||||||||||    
T  35760611 tgttaaaattatatgtcaatgttatat 35760585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 21 - 253
Target Start/End: Original strand, 16917882 - 16918114
Alignment:
Q  21 tactaaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaat 120  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||    
T  16917882 tacttaactagactttccacctgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 16917981  T
Q  121 atgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcat 220  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||    
T  16917982 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcat 16918081  T
Q  221 tcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||| |||||||    
T  16918082 tcttttgttaaaattatatgtcaatattatatt 16918114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 37590804 - 37591030
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||||    
T  37590804 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaatcaaatctcaatgcatatcaaagagaataaaacatgtgg 37590903  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  37590904 tcccaaatatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtcttacttcattctttt 37591003  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  37591004 gttaaaattatatgtcaatgttatatt 37591030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 36 - 253
Target Start/End: Original strand, 44376088 - 44376305
Alignment:
Q  36 tccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaata 135  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||  |||||    
T  44376088 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcacaaata 44376187  T
Q  136 tatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaatt 235  Q
    ||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44376188 tatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaatt 44376287  T
Q  236 atatgtcaatgttatatt 253  Q
    ||||||||||||||||||    
T  44376288 atatgtcaatgttatatt 44376305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 52434854 - 52434627
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  52434854 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 52434755  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  52434754 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 52434655  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  52434654 tgttaaaattatatgtcaatattatatt 52434627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 48118534 - 48118757
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  48118534 actagactttccacccgtgctgccgcacgagtcatatacattgtagatgt---agacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtgg 48118630  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||||||||||||||||| ||||||||  ||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  48118631 tcccaaatatatgcagatgttggaattcgaacctcaaacaccacacgtattcaccttaaaaatattaatttttaccaatcgtgtgttacttcattctttt 48118730  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  48118731 gttaaaattatatgtcaatgttatatt 48118757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 30824922 - 30825148
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  30824922 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 30825021  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    | | |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  30825022 ttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 30825121  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  30825122 gttaaaattatatgtcaatattatatt 30825148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 31965966 - 31966195
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| |  || | | |||||||||||||||||||||||||||||| |||||||    
T  31965966 taaactagactttccacccgtgctgccgcacgggtcatatacattgtagatttattatacataaataaatctcaatgcatatcaaagagaatgaaatatg 31966065  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  31966066 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 31966165  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  31966166 tttgttaaaattatatgtcaatattatatt 31966195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 41387356 - 41387129
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||| | ||||| ||| |||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  41387356 aactagactttccatccgtgctgccgtacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtg 41387257  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||| || |||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  41387256 gtcccaaatatatgcagatgctgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcgatcgtgtcttacttcattcttt 41387157  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  41387156 tgttaaaattatatgtcaatgttatatt 41387129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 39058355 - 39058583
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||| ||||| |||| | |||  |||||||||||||| ||||||||    
T  39058355 aaactagattttccacctgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaattttaatatatatcaaagagaatgaaatatgt 39058454  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| ||||||||   ||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  39058455 ggtcccaaatatatcaagatgttggaattcgaacctcagataccacacttattcaccttaaaaatattaatttttatcaatcatgtgttacttcattctt 39058554  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||    
T  39058555 ttgttaaaattatatgtcaatgttatatt 39058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 53143260 - 53143488
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    |||||||| ||| |||| ||||| |||||||||||||||||||||||||| |  |||| ||||| |||||||||||||||||||||||||| ||||||||    
T  53143260 aaactagatttttcacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 53143359  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  53143360 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 53143459  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||| |||||||    
T  53143460 ttgttaaaattatatgtcaatattatatt 53143488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 37651895 - 37651669
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||| ||||||||| ||||||||||    
T  37651895 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatgaaagagaatgaaatatgtgg 37651796  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||  |||||||| | ||||||||||||||||||||| |||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  37651795 tctcaaatatatgcagatgttggaattcgaacctcaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 37651696  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  37651695 gttaaaattatatgtcaatattatatt 37651669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 12090459 - 12090686
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  12090459 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 12090558  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttt 225  Q
    ||| ||||||||   |||||||||||||||||||||||||||||  |||||||    |||||||||||||||||||||||||||||||||||| ||||||    
T  12090559 tcccaaatatatgtagatgttggaattcgaacctcagacaccacgcttattcaaccaaaaaatattaatttttatcaatcgtgtgttacttcatttcttt 12090658  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  12090659 tgttaaaattatatgtcaatattatatt 12090686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 50 - 253
Target Start/End: Original strand, 31628510 - 31628713
Alignment:
Q  50 cgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttgg 149  Q
    ||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||||||||||  |||||||| | ||||||||    
T  31628510 cgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaattaaatatgtggtctcaaatatatgcagatgttgg 31628609  T
Q  150 aattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 249  Q
    ||||||||||||| |||||||| |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31628610 aattcgaacctcatacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 31628709  T
Q  250 tatt 253  Q
    ||||    
T  31628710 tatt 31628713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 26 - 249
Target Start/End: Original strand, 47142799 - 47143022
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| | |||||||    
T  47142799 aactagactttccacccgtgctgccgcactggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgacatatgtg 47142898  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||  |||||||| | |||||| |||||||||||||||||||||   |||||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  47142899 gtctcaaatatatgcagatgttagaattcgaacctcagacaccatgcttattcaccttaaaaatattaatttttatcgattgtgtgttacttcattcttt 47142998  T
Q  226 tgttaaaattatatgtcaatgtta 249  Q
    |||||||||||||| |||||||||    
T  47142999 tgttaaaattatatctcaatgtta 47143022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 51 - 253
Target Start/End: Original strand, 52098214 - 52098417
Alignment:
Q  51 gcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttgga 150  Q
    |||||||||||||||| |||| || | ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||    
T  52098214 gcacgggtcatatacactgtaaatatagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 52098313  T
Q  151 attcgaacctcagacaccacatttattcactttaaaaatatt-aatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 249  Q
    |||| ||| |||||||| ||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52098314 attcaaacttcagacacaacacttattcaccttaaaaatattaaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 52098413  T
Q  250 tatt 253  Q
    ||||    
T  52098414 tatt 52098417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 78 - 253
Target Start/End: Original strand, 45782480 - 45782655
Alignment:
Q  78 gtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttatt 177  Q
    ||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||||||   |||||||||||| ||||||||||||||||| |||||    
T  45782480 gtagacaaaaataaatctcaatatatatcaaagagaatgaaatatgtggtcctaaatatatgaagatgttggaatttgaacctcagacaccacacttatt 45782579  T
Q  178 cactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45782580 caccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 45782655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 29 - 253
Target Start/End: Complemental strand, 54625177 - 54624960
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    |||| ||||||| |||| |  ||||||||| |||||||||||||| || ||||| ||||| |||||| ||||||||||||||||||| ||||||||||||    
T  54625177 tagattttccacatgtgatgtcgcacgggttatatacattgtagacgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtc 54625078  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    | |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||      ||||||||||||| |||||    
T  54625077 ccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatca------tgttacttcattc-tttgt 54624985  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  54624984 taaaattatatgtcaatgttatatt 54624960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 90 - 253
Target Start/End: Original strand, 50229769 - 50229933
Alignment:
Q  90 aaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaat 189  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  50229769 aaatctcaatgcatatcaaagagaatgaaacatgtggtccaaaatatatgcagatgttggaattcgaacctcagacaccatacttattcaccttaaaaat 50229868  T
Q  190 attaa-tttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50229869 attaattttttatcaatagtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 50229933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 50229712 - 50229766
Alignment:
Q  67 ttgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaata 121  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||    
T  50229712 ttgtagatgtagtagacaaaaaaaaatctcaatgcatatcaaagagaatgaaata 50229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 18209743 - 18209699
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacatt 68  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||    
T  18209743 taaactagactttccacccgtgctgccgcacgggtcatatacatt 18209699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 12090730 - 12090773
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  12090730 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 12090773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 16905218 - 16905261
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  16905218 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 16905261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 16918158 - 16918201
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  16918158 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 16918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 30825192 - 30825235
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  30825192 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 30825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 31966239 - 31966282
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  31966239 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 31966282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 39058622 - 39058665
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  39058622 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 39058665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 45977264 - 45977307
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  45977264 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 45977307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 47143070 - 47143113
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  47143070 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 47143113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 48118802 - 48118845
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  48118802 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 48118845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 52098460 - 52098503
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  52098460 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 52098503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 52434583 - 52434540
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  52434583 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 52434540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 53143534 - 53143577
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  53143534 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 53143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 54624922 - 54624879
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  54624922 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 54624879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 50229979 - 50230019
Alignment:
Q  213 tacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  50229979 tacttcattcttttgtaaaaattatatgttaatgttatatt 50230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 41387085 - 41387042
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  41387085 tgttacttcattattttgtaaaaattatatgttaatgttatatt 41387042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 44376347 - 44376390
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  44376347 tgttacttcattattttgtaaaaattatatgttaatgttatatt 44376390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 45782697 - 45782734
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgt 247  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  45782697 tgttacttcattcttttgtaaaaattatatgttaatgt 45782734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 11725421 - 11725193
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| | |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  11725421 aaactagactttccacccgtgctgctgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 11725322  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||  |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11725321 ggtctcaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctt 11725222  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||    
T  11725221 ttgttaaaattatatgtcaatgttatatt 11725193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 29 - 253
Target Start/End: Complemental strand, 18569092 - 18568868
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  18569092 tagactttccacccgtgctaccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaataaaatatgtggtc 18568993  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    | |||||||| | ||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  18568992 ccaaatatatgcagatgttggaattcgaacctcaaacaccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 18568893  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  18568892 taaaattatatgtcaatgttatatt 18568868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 26 - 252
Target Start/End: Complemental strand, 28583085 - 28582859
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  28583085 aactagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaatgtatatcaaagagaatgaaatatgtg 28582986  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||  |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28582985 gtctcaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 28582886  T
Q  226 tgttaaaattatatgtcaatgttatat 252  Q
    |||||||||||||||||||||||||||    
T  28582885 tgttaaaattatatgtcaatgttatat 28582859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 18842133 - 18841907
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  18842133 actagactttccacccgttctgccgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtgg 18842034  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  18842033 tccaaaatatatgcagatgttggaattcgaatctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtatgttacttcattctttt 18841934  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  18841933 gttaaaattatatgtcaatgttatatt 18841907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 27 - 249
Target Start/End: Complemental strand, 44837138 - 44836916
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||| ||||||||| ||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  44837138 actagcctttccacccgtgctgccgcacgggttatatacattgtagatgtagtagacaaaaataaatctcaatacatatcaaagagaataaaatatgtgg 44837039  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    |||||||||||| | |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  44837038 tcctaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattctttt 44836939  T
Q  227 gttaaaattatatgtcaatgtta 249  Q
    ||||||||||||| |||||||||    
T  44836938 gttaaaattatatctcaatgtta 44836916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 30473883 - 30474110
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  30473883 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 30473982  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  30473983 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 30474082  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  30474083 tgttaaaattatatgtcaatattatatt 30474110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 15961361 - 15961135
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  15961361 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 15961262  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  15961261 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 15961162  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  15961161 gttaaaattatatgtcaatattatatt 15961135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 24409105 - 24408879
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||| ||| ||| | |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| ||| ||||||||||    
T  24409105 actagactttctacccgtgttgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatcttaatgcatatcaaagataatgaaatatgtgg 24409006  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24409005 tcccaaatatatgcagatgttggaattcgaacatcatacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 24408906  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  24408905 gttaaaattatatgtcaatgttatatt 24408879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 51 - 253
Target Start/End: Complemental strand, 39257648 - 39257446
Alignment:
Q  51 gcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttgga 150  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||    
T  39257648 gcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 39257549  T
Q  151 attcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttat 250  Q
    ||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39257548 atttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttat 39257449  T
Q  251 att 253  Q
    |||    
T  39257448 att 39257446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 10478169 - 10477940
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  10478169 taaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 10478070  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||  |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  10478069 tggtcacaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 10477970  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  10477969 tttgttaaaattatatgtcaatattatatt 10477940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 27 - 248
Target Start/End: Original strand, 35122322 - 35122543
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    |||||||||||||||  ||||  ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  35122322 actagactttccacccctgctgtcgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 35122421  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35122422 tccaaaatatatgcagatgttggaattcgaatctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 35122521  T
Q  227 gttaaaattatatgtcaatgtt 248  Q
     |||||||||||||||||||||    
T  35122522 attaaaattatatgtcaatgtt 35122543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 18997931 - 18997703
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  18997931 aaactagactatccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 18997832  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  18997831 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 18997732  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||| |||||||    
T  18997731 ttgttaaaattatatgtcaatattatatt 18997703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 18175611 - 18175384
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  18175611 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 18175512  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||| ||||||||   ||||||||||||| ||||||| ||||||||||||||||||||    
T  18175511 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccaaaaaaatattaattattatcaaacgtgtgttacttcattcttt 18175412  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  18175411 tgttaaaattatatgtcaatattatatt 18175384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 32110860 - 32111087
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  32110860 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 32110959  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    || | |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  32110960 gttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 32111059  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  32111060 tgttaaaattatatgtcaatattatatt 32111087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 50 - 253
Target Start/End: Complemental strand, 40027006 - 40026803
Alignment:
Q  50 cgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttgg 149  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||    
T  40027006 cgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagataatgaaatatgtggtcccaaatatatgcagatgttgg 40026907  T
Q  150 aattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 249  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40026906 aatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 40026807  T
Q  250 tatt 253  Q
    ||||    
T  40026806 tatt 40026803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 44832185 - 44832412
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  44832185 aactagactttccacccgtgttgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 44832284  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  44832285 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 44832384  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  44832385 tgttaaaattatatgtcaatattatatt 44832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 6299020 - 6299246
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  6299020 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 6299119  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||| |||    
T  6299120 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattccttt 6299219  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  6299220 gttaaaattatatgtcaatattatatt 6299246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 995812 - 996041
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  995812 taaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 995911  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| |  ||||||||||||||||||||||||||||  ||||||||   ||||||||||| ||||||||||||||||||||||||||||    
T  995912 tggtcccaaatatatgcatatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaacttttatcaatcgtgtgttacttcattct 996011  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  996012 tttgttaaaattatatgtcaatattatatt 996041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 50 - 253
Target Start/End: Original strand, 28274237 - 28274440
Alignment:
Q  50 cgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttgg 149  Q
    ||||||| ||||||||||||||||||| | ||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||  | ||||||||    
T  28274237 cgcacggatcatatacattgtagatgtagcagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatacgcagatgttgg 28274336  T
Q  150 aattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 249  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28274337 aattcgaacctcatacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 28274436  T
Q  250 tatt 253  Q
    ||||    
T  28274437 tatt 28274440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 32 - 253
Target Start/End: Complemental strand, 11142691 - 11142464
Alignment:
Q  32 actttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtccta 131  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||| ||| |    
T  11142691 actttccacccgtgctgccgcacggatcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgctccca 11142592  T
Q  132 aatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaattt------ttatcaatcgtgtgttacttcattcttt 225  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||      ||||||||||||||||||||||||||||    
T  11142591 aatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtgttacttcattcttt 11142492  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||| |||||||||    
T  11142491 tgttaaaattatatgtcagtgttatatt 11142464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 19413022 - 19412834
Alignment:
Q  66 attgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagac 165  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  19413022 attgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagac 19412923  T
Q  166 accacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattc-ttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19412922 accacagttattcaccttaaaaatattaatttttatccatcgtgtgttacttcattctttttgttaaaattatatgtcaatgttatatt 19412834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 78 - 253
Target Start/End: Complemental strand, 19240841 - 19240666
Alignment:
Q  78 gtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttatt 177  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||||||||| |||||    
T  19240841 gtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttatt 19240742  T
Q  178 cactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19240741 cacgttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 19240666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 78 - 253
Target Start/End: Complemental strand, 19314025 - 19313850
Alignment:
Q  78 gtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttatt 177  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||||||||| |||||    
T  19314025 gtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttatt 19313926  T
Q  178 cactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19313925 cacgttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 19313850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 59 - 253
Target Start/End: Original strand, 18210656 - 18210850
Alignment:
Q  59 catatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaac 158  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||| | |||||||||||| ||||    
T  18210656 catatacattgtagatatagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaatttgaac 18210755  T
Q  159 ctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  18210756 ctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttatttccttcttttgttaaagttatatgtcaatgttatatt 18210850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 39997921 - 39997726
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||||    
T  39997921 aactagaatttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgtatatcaaagagaatgaaatatgtg 39997822  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcatt 221  Q
    || | |||||||| | |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||    
T  39997821 gttccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcacctttaaaatattaatttttatcaatcgtgtgttacttcatt 39997726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 90 - 253
Target Start/End: Original strand, 24004790 - 24004953
Alignment:
Q  90 aaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaat 189  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  24004790 aaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaat 24004889  T
Q  190 attaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  24004890 attaatttttatcaatcatgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 24004953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 23353692 - 23353803
Alignment:
Q  142 gatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgt 241  Q
    ||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23353692 gatgttggaattcgaacctcagacaccccacttattcaccttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattatatgt 23353791  T
Q  242 caatgttatatt 253  Q
    ||||||||||||    
T  23353792 caatgttatatt 23353803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 59 - 253
Target Start/End: Original strand, 25875322 - 25875525
Alignment:
Q  59 catatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaac 158  Q
    ||||||||| |||||| | ||||| ||||| |||||||||||||||| ||||||||||||| ||||| |||      ||| | |||| ||||||||||||    
T  25875322 catatacatcgtagatatagtagacaaaaacaaatctcaatgcatattaaagagaataaaacatgtgctccc-----tatgcagatgctggaattcgaac 25875416  T
Q  159 ctcagacacc--------------acatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaa 244  Q
    ||||||||                ||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25875417 ctcagacatattaaagagaataaaacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaa 25875516  T
Q  245 tgttatatt 253  Q
    |||||||||    
T  25875517 tgttatatt 25875525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 18481929 - 18481986
Alignment:
Q  196 ttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18481929 ttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 18481986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 23353622 - 23353677
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtaga 82  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  23353622 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtaga 23353677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 39997708 - 39997665
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  39997708 tgttacttcattcttttgtaaaaattatatgtcaatgttatatt 39997665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 19241055 - 19241006
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgt 76  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  19241055 actagactttccacccgcgctgccgcacgggtcatatacattgtagatgt 19241006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 19314239 - 19314190
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgt 76  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  19314239 actagactttccacccgcgctgccgcacgggtcatatacattgtagatgt 19314190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 6299290 - 6299333
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  6299290 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 6299333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 10477896 - 10477853
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  10477896 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 10477853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 11142424 - 11142381
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  11142424 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 11142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 11725149 - 11725106
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  11725149 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 11725106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 18175340 - 18175297
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  18175340 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 18175297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 18997659 - 18997616
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  18997659 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 18997616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 19240623 - 19240580
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  19240623 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19240580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 19313807 - 19313764
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  19313807 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19313764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 19412795 - 19412752
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  19412795 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19412752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 23353846 - 23353889
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  23353846 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 23353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 24408838 - 24408795
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  24408838 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 24408795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 30474153 - 30474196
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  30474153 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 30474196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 32111131 - 32111174
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  32111131 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 32111174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 35122585 - 35122628
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  35122585 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 35122628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 39997623 - 39997580
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  39997623 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 39997580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 44832457 - 44832500
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  44832457 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 44832500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 44836867 - 44836824
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  44836867 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 44836824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 18210893 - 18210935
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatat 252  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  18210893 tgttacttcattcttttgtaaaaattatatgttaatgttatat 18210935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 996085 - 996128
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||    
T  996085 tgttacttcattcttttgtaaaaattatatgttaatgttgtatt 996128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 18841872 - 18841829
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| ||||||||| || |||||||||||    
T  18841872 tgttacttcattcttttgtaaaaattatacgttaatgttatatt 18841829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 25875567 - 25875610
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  25875567 tgttacttcattattttgtaaaaattatatgttaatgttatatt 25875610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 28582820 - 28582777
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||    
T  28582820 tgttacttcattcttttgtaaaaattgtatgttaatgttatatt 28582777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 39257401 - 39257362
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgtta 249  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  39257401 tgttacttcattcttttgtaaaaattatatgttaatgtta 39257362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 40169715 - 40169757
Alignment:
Q  22 actaaactagactttccacctgtgctaccgcacgggtcatata 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||    
T  40169715 actatactagtctttccacccgtgctaccgcacgggtcatata 40169757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 4476885 - 4476921
Alignment:
Q  152 ttcgaacctcagacaccacatttattcactttaaaaa 188  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  4476885 ttcgaacctcaaacacctcatttattcactttaaaaa 4476921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 8700492 - 8700264
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||||| ||||||||    
T  8700492 aaactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaatgaaatatgt 8700393  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8700392 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacattttttcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctt 8700293  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||    
T  8700292 ttgttaaaattatatgtcaatgttatatt 8700264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 26 - 249
Target Start/End: Original strand, 19596362 - 19596585
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||||| |||||||||    
T  19596362 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtg 19596461  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19596462 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttt 19596561  T
Q  226 tgttaaaattatatgtcaatgtta 249  Q
    ||||||||||||||||||||||||    
T  19596562 tgttaaaattatatgtcaatgtta 19596585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 29 - 253
Target Start/End: Complemental strand, 31424236 - 31424012
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  31424236 tagactttccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 31424137  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
    | ||||||||   ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  31424136 ccaaatatatgtagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgt 31424037  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  31424036 taaaattatatgtcaatgttatatt 31424012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 41664739 - 41664513
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  41664739 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 41664640  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  41664639 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 41664540  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  41664539 gttaaaattatatgtcaatattatatt 41664513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 26231261 - 26231485
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||||| ||||||||||||    
T  26231261 tagacttttcacccgtgctaccgcacaggttatatacattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaatgaaatatgtggtc 26231360  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 228  Q
      |||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  26231361 tcaaatatattcagatgttggaattcgaacctcagacaccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 26231460  T
Q  229 taaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||    
T  26231461 taaaattatatgtcaatgttatatt 26231485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 6120782 - 6120555
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  6120782 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 6120683  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  6120682 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 6120583  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||| ||||||||||| |||||||    
T  6120582 tgttaaaactatatgtcaatattatatt 6120555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 18351781 - 18351554
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  18351781 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 18351682  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  18351681 gtcccaaatatatgcagatgttggaattcgaacctcaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 18351582  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  18351581 tgttaaaattatatgtcaatattatatt 18351554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 41663466 - 41663240
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  41663466 actagactttccacccgtgctgccgcatgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 41663367  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  41663366 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 41663267  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  41663266 gttaaaattatatgtcaatattatatt 41663240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 42055428 - 42055202
Alignment:
Q  27 actagactttccacctgtgctac--cgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||| ||    
T  42055428 actagactttccacccgtgctacaccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaataggt 42055329  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    | ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42055328 gatcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctt 42055229  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||| ||  |||||||||||||||||    
T  42055228 ttgttaagat--tatgtcaatgttatatt 42055202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 44902310 - 44902085
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  44902310 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 44902211  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||| |||||||||||||||||||||||||||||||||||    
T  44902210 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacaaaaaaaata-taatttttatcaatcgtgtgttacttcattctttt 44902112  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  44902111 gttaaaattatatgtcaatattatatt 44902085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 20545057 - 20544828
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  20545057 taaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatggtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 20544958  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | |||||| |||||||||||| | |||||||  ||||||||   |||||||||||||||||||||||||||| |||||||||||    
T  20544957 tggtcccaaatatatgcagatgttagaattcgaacctaaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtacttcattct 20544858  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  20544857 tttgttaaaattatatgtcaatattatatt 20544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 999262 - 999457
Alignment:
Q  58 tcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaa 157  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||||||||||    
T  999262 tcatatactttgtagatgtagtagataaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgtagatgttggaattcgaa 999361  T
Q  158 cctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  999362 cctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 999457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 36279455 - 36279680
Alignment:
Q  27 actagactttccacctgtgc-taccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    ||||||||||||||| |||| ||  ||||| |||||||||||||||||||| ||||| ||||| |||| |||||| |||||||||||||| |||||||||    
T  36279455 actagactttccacccgtgcgta--gcacgagtcatatacattgtagatgtagtagacaaaaacaaatatcaatgtatatcaaagagaatgaaatatgtg 36279552  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||| |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36279553 gtcccaaatatatgcagatgttggaattcgaatctcagataccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 36279652  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  36279653 tgttaaaattatatgtcaatgttatatt 36279680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 34007714 - 34007935
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| |||||||     |||| |||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |    
T  34007714 actagactttccacccgtgctac-----gggtaatatccattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtag 34007808  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  34007809 tcccaaatatatgccgatgttggaattcgaacctcagacaccacacttatccaccttaaaaatattaatttttataaatcgtgtgttacttcattctttt 34007908  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  34007909 gttaaaattatatgtcaatgttatatt 34007935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 42442193 - 42441963
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  42442193 actagactttccacccgtgttgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 42442094  T
Q  127 tcctaaatatatactgatgttggaatt------cgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcat 220  Q
    ||| |||||||| | ||||||||||||      |||||||||||||||||  ||||||||   |||||||||||||||||||||||  ||||||||||||    
T  42442093 tcccaaatatatgcagatgttggaattcgaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatc--gtgttacttcat 42441996  T
Q  221 tcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||| |||||||    
T  42441995 tcttttgttaaaattatatgtcaatattatatt 42441963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 68 - 249
Target Start/End: Complemental strand, 16215012 - 16214831
Alignment:
Q  68 tgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacac 167  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |  |||| ||||||||||||||  ||||    
T  16215012 tgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtccaaaatatatgcaaatgtaggaattcgaacctctaacac 16214913  T
Q  168 cacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 249  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  16214912 cacacttattcaccttaaaaatattaatttttattaatcgtgtgttacttcattcttttgttaaaattatatgtcagtgtta 16214831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 27944795 - 27944949
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  27944795 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 27944894  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcac 180  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||    
T  27944895 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcac 27944949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 52 - 193
Target Start/End: Original strand, 692227 - 692368
Alignment:
Q  52 cacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaa 151  Q
    |||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||| |||||| |||||| |||||||| | ||||||||||    
T  692227 cacgggtcatatacattgtaaatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatatggtcccaaatatatgcagatgttggaa 692326  T
Q  152 ttcgaacctcagacaccacatttattcactttaaaaatatta 193  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  692327 ttcgaacctcagacaccacacttattcaccttaaaaatatta 692368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 19596634 - 19596677
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  19596634 tgttacttcattcttttgttaaaattatatgttaatgttatatt 19596677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 6120510 - 6120467
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  6120510 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 6120467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 16214784 - 16214741
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  16214784 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 16214741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 18351510 - 18351467
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  18351510 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 18351467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 26231527 - 26231570
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  26231527 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 26231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 31423967 - 31423924
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  31423967 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 31423924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 34007980 - 34008023
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  34007980 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 34008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 41663195 - 41663152
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  41663195 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 41663152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 42441919 - 42441876
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  42441919 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 42441876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 999500 - 999543
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  999500 tgttacttcattattttgtaaaaattatatgttaatgttatatt 999543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 36279723 - 36279766
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||    
T  36279723 tgttatttcattcttttgtaaaaattatatgttaatgttatatt 36279766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 41664469 - 41664426
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||| | |||||||||||| |||||||||||    
T  41664469 tgttacttcattcttttataaaaattatatgttaatgttatatt 41664426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 44902041 - 44901998
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||    
T  44902041 tgttaattcattcttttgtaaaaattatatgttaatgttatatt 44901998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 25889039 - 25889083
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgta 71  Q
    ||||||||||||||  ||||| |||||||||||||||||| ||||    
T  25889039 actagactttccactcgtgctgccgcacgggtcatatacaatgta 25889083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 7e-95; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 9216261 - 9216034
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  9216261 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagataaaaacaaatctcaatgcatatcaaagagaataaaacatgtg 9216162  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  9216161 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttatttaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttt 9216062  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  9216061 tgttaaaattatatgtcaatgttatatt 9216034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 34888683 - 34888912
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  34888683 taaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 34888782  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  34888783 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 34888882  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  34888883 tttgttaaaattatatgtcaatattatatt 34888912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 4266610 - 4266384
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  4266610 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 4266511  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  4266510 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 4266411  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  4266410 gttaaaattatatgtcaatattatatt 4266384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 38913747 - 38913973
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  38913747 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 38913846  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  38913847 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 38913946  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  38913947 gttaaaattatatgtcaatattatatt 38913973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 23482704 - 23482933
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||| || |||||||    
T  23482704 taaactagactttccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaatacaaatctcaatgcatatcaaagagcatgaaatatg 23482803  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | ||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  23482804 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttacttcattct 23482903  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||| ||||||||    
T  23482904 tttgttaaaattatatgtcaacgttatatt 23482933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 32 - 253
Target Start/End: Complemental strand, 35614291 - 35614070
Alignment:
Q  32 actttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtccta 131  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |    
T  35614291 actttccacccgtgctaccgcacgggtcatatacattgtaaatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccca 35614192  T
Q  132 aatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaa 231  Q
    ||||||| | ||||||||||||||||| | |||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35614191 aatatatgcagatgttggaattcgaacttaagacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaa 35614092  T
Q  232 aattatatgtcaatgttatatt 253  Q
    |||||||||||||||| |||||    
T  35614091 aattatatgtcaatgtcatatt 35614070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 7334174 - 7333947
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    ||||||||||| |||| ||||| | |||||||| ||||| || |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  7334174 aactagacttttcacccgtgctgctgcacgggttatatagatggtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtg 7334075  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | ||||||||||||| |||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  7334074 gtcccaaatatatgcagatgttggaattcaaacctcagacaccacacttattcaccataaaaatattaatttttatcaatcgtgtgttacttcattcttt 7333975  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  7333974 tgttaaaattatatgtcaatgttatatt 7333947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 18706509 - 18706734
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||| ||||||||||    
T  18706509 actagactttccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtgg 18706608  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  18706609 tcc-aaatatatgcagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgtaacttcattctttt 18706707  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||| ||||||||    
T  18706708 gttaaaattatatgtcaacgttatatt 18706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 38444860 - 38444634
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||| | ||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  38444860 actagactttccacccgtgatgccgcatgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 38444761  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  38444760 tcccaaatatatgcagatgttgaaattcgaacttcagacaccacacttattcaccttaaaaatattaatttttatcaataatgtgttacttcattctttt 38444661  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    | |||||||||||||||||||||||||    
T  38444660 gataaaattatatgtcaatgttatatt 38444634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 18855232 - 18855458
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||  ||||| |||   |||||||||||||||||||||||||||||| |||||    
T  18855232 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgcagtagacaaatc-aaatctcaatgcatatcaaagagaataaaacatgtg 18855330  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| ||||||||   ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  18855331 gtcccaaatatatgtagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtattacttcattcttt 18855430  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  18855431 tgttaaaattatatgtcaatgttatatt 18855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 2951366 - 2951592
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| || |  || | ||||| |||||||||||||||||||||||||| ||||||||||    
T  2951366 actagactttccacccgtgctgccgcacgggtcatatacattgtaaatataataaacaaaaaaaaatctcaatgcatatcaaagagaatgaaatatgtgg 2951465  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  2951466 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 2951565  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  2951566 gttaaaattatatgtcaatattatatt 2951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 1232025 - 1231813
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| || | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  1232025 actagactttccacccgtgctgccgcacgggtcatatacattgtaaatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 1231926  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  1231925 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 1231826  T
Q  227 gttaaaattatat 239  Q
    |||||||||||||    
T  1231825 gttaaaattatat 1231813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 67 - 253
Target Start/End: Complemental strand, 39728169 - 39727983
Alignment:
Q  67 ttgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagaca 166  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||    
T  39728169 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 39728070  T
Q  167 ccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39728069 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 39727983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 51 - 253
Target Start/End: Complemental strand, 50151265 - 50151063
Alignment:
Q  51 gcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttgga 150  Q
    |||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||    
T  50151265 gcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 50151166  T
Q  151 attcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttat 250  Q
    ||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50151165 attcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattat 50151066  T
Q  251 att 253  Q
    |||    
T  50151065 att 50151063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 52687114 - 52687339
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||| ||| | ||||| |||||||||||| ||| ||||||||| ||||||||||    
T  52687114 actagactttccacccgtgctgtcgcacgggtcatatacattgtagatgtagtatacaaaaacaaatctcaatgcctatgaaagagaatgaaatatgtgg 52687213  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  52687214 tcccaaatatatgcagatgttggaatccgaacctca-acaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattttttt 52687312  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
     ||||||||||||||||||||||||||    
T  52687313 attaaaattatatgtcaatgttatatt 52687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 35615005 - 35614819
Alignment:
Q  66 attgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagac 165  Q
    |||||| |||| ||||| ||||| |||||| ||||||||||||||||||| ||||||||||||  |||||||| | ||||||||||||||||||||||||    
T  35615005 attgtaaatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcagac 35614906  T
Q  166 accacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35614905 accacacttatttacctt-aaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtcatatt 35614819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 70 - 248
Target Start/End: Original strand, 19764593 - 19764771
Alignment:
Q  70 tagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacacca 169  Q
    ||||||| ||| | ||||| |||||||||||||||| ||| ||||| ||||||||||||| |||||||| |  ||||| |||||||||||||||||||||    
T  19764593 tagatgtagtatacaaaaacaaatctcaatgcatattaaaaagaatgaaatatgtggtcccaaatatatgcaaatgtttgaattcgaacctcagacacca 19764692  T
Q  170 catttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtt 248  Q
    || |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||    
T  19764693 cacttattcaccttaaaaatattaatttttatgaatcgtgtgttacttcattattttgttaaaattacatgtcaatgtt 19764771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 31018200 - 31018353
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  31018200 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 31018299  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcac 180  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||    
T  31018300 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcac 31018353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 50326228 - 50326077
Alignment:
Q  29 tagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 128  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  50326228 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 50326129  T
Q  129 ctaaatatatactgatgttggaattcgaacctcagacaccacatttattcac 180  Q
    | |||||||| | |||||||||||||||||||||||||||||  ||||||||    
T  50326128 ccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcac 50326077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 2590468 - 2590338
Alignment:
Q  122 tgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcatt 221  Q
    |||||| | |||||||| | |||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  2590468 tgtggttccaaatatatgcagatgttcgaattc-aacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcatt 2590370  T
Q  222 cttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||||||    
T  2590369 cttttgttaaaattatatgtcaatgttatatt 2590338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 142 - 253
Target Start/End: Complemental strand, 19768578 - 19768467
Alignment:
Q  142 gatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgt 241  Q
    ||||||| | |||||||||||||||||||| |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19768578 gatgttgaatttcgaacctcagacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttacttcattcttttgttaaaattatatgt 19768479  T
Q  242 caatgttatatt 253  Q
    ||||||||||||    
T  19768478 caatgttatatt 19768467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 29942247 - 29942153
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaata 121  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||    
T  29942247 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaata 29942153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 5061419 - 5061341
Alignment:
Q  60 atatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatat 138  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  5061419 atatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatat 5061341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 52957105 - 52957056
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgt 76  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  52957105 actagactctccacccgtgctgccgcacgggtcatatacattgtagatgt 52957056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 1231768 - 1231725
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  1231768 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 1231725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 2951636 - 2951679
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  2951636 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 2951679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 4266340 - 4266297
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  4266340 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 4266297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 18706773 - 18706816
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  18706773 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 18706816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 19764814 - 19764857
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  19764814 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19764857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 19768425 - 19768382
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  19768425 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19768382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 23482972 - 23483015
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  23482972 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 23483015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 35614777 - 35614734
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  35614777 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 35614734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 38914017 - 38914060
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  38914017 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 38914060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 52036310 - 52036353
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  52036310 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 52036353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 2590512 - 2590466
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgt 70  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  2590512 taaactagactttccacccgtgctgccgcacgagtcatatacattgt 2590466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 7333903 - 7333863
Alignment:
Q  213 tacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  7333903 tacttcattcttttgtaaaaattatatgttaatgttatatt 7333863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 35614027 - 35613984
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  35614027 tgttacttcattcttttgtaaaaattatatgttaattttatatt 35613984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 38444592 - 38444549
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||    
T  38444592 tgttaattcattcttttgtaaaaattatatgttaatgttatatt 38444549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 52687381 - 52687424
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||| |||||||||||||| |||||||||||| |||||||||||    
T  52687381 tgttgcttcattcttttgtaaaaattatatgttaatgttatatt 52687424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 175; Significance: 3e-94; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 20655049 - 20655275
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  20655049 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtgg 20655148  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  20655149 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtcttacttcattctttt 20655248  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||    
T  20655249 gttaaaattatatgtcaatgttatatt 20655275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 5479426 - 5479199
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    ||||||||||| |||||||| |  ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  5479426 aactagacttttcacctgtgttgtcgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtg 5479327  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
     ||| ||||||||   |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5479326 atcccaaatatatgtagatgttggaattcgaacctcagacactacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 5479227  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||    
T  5479226 tgttaaaattatatgtcaatgttatatt 5479199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 33375993 - 33375765
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    |||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  33375993 actaaactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtgg 33375894  T
Q  127 t--cctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    |  || |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  33375893 tgtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattctt 33375794  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||    
T  33375793 ttgttaaaattatatgtcaatgttatatt 33375765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 38246863 - 38247091
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  38246863 aaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 38246962  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  38246963 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 38247062  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||| |||||||    
T  38247063 ttgttaaaattatatgtcaatattatatt 38247091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 34107337 - 34107564
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  34107337 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 34107436  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  34107437 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 34107536  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  34107537 tgttaaaattatatgtcaatattatatt 34107564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 20874917 - 20874691
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  20874917 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 20874818  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  20874817 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 20874718  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  20874717 gttaaaattatatgtcaatattatatt 20874691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 34110881 - 34110655
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  34110881 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 34110782  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  34110781 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 34110682  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||    
T  34110681 gttaaaattatatgtcaatattatatt 34110655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 1396220 - 1395992
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    |||||| | |||||||| ||||| ||||||||||||||||||||| |||||| | ||| ||||| |||||||||||||||||||||||||| ||||||||    
T  1396220 aaactatattttccacccgtgctgccgcacgggtcatatacattgcagatgtagcagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 1396121  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||| | | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  1396120 ggtcccaaatatctgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcagtcgtgtgttacttcattctt 1396021  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||||||||||    
T  1396020 ttgttaaaattatatgtcaatgttatatt 1395992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 16526304 - 16526532
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  16526304 aaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 16526403  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||| |||||    
T  16526404 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcgttctt 16526503  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||| |||||||    
T  16526504 ttgttaaaattatatgtcaatattatatt 16526532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 10729441 - 10729668
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||| |||||||| |||||||||    
T  10729441 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatccaagagaatgaaatatgtg 10729540  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||| |||||||||||||||||||||||||||||||    
T  10729541 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattattttttatcaatcgtgtgttacttcattcttt 10729640  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  10729641 tgttaaaattatatgtcaatattatatt 10729668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 27648120 - 27647933
Alignment:
Q  66 attgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagac 165  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  27648120 attgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatacagatgttggaattcgaacctcagac 27648021  T
Q  166 accacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27648020 accacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 27647933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 36 - 253
Target Start/End: Original strand, 25099245 - 25099462
Alignment:
Q  36 tccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaata 135  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||| ||||||||  |||||    
T  25099245 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctgaatgcatatcaaagagaataaaacatgtggtcacaaata 25099344  T
Q  136 tatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaatt 235  Q
    ||| | |||||||||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25099345 tatgcagatgttggaattcgaacctcaggcaccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaatt 25099444  T
Q  236 atatgtcaatgttatatt 253  Q
    ||||||||||||||||||    
T  25099445 atatgtcaatgttatatt 25099462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 36 - 253
Target Start/End: Original strand, 25158335 - 25158552
Alignment:
Q  36 tccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaata 135  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||| ||||||||  |||||    
T  25158335 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctgaatgcatatcaaagagaataaaacatgtggtcacaaata 25158434  T
Q  136 tatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaatt 235  Q
    ||| | |||||||||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25158435 tatgcagatgttggaattcgaacctcaggcaccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaatt 25158534  T
Q  236 atatgtcaatgttatatt 253  Q
    ||||||||||||||||||    
T  25158535 atatgtcaatgttatatt 25158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 26 - 253
Target Start/End: Original strand, 2398941 - 2399166
Alignment:
Q  26 aactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtg 125  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  2398941 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 2399040  T
Q  126 gtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 225  Q
    |||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||  |||||||||||||||||    
T  2399041 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatc--gtgttacttcattcttt 2399138  T
Q  226 tgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||| |||||||    
T  2399139 tgttaaaattatatgtcaatattatatt 2399166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 17373161 - 17373390
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatata---cattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    ||||||||||||||| ||||| ||||||||||||||||   |||||||||| | ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  17373161 actagactttccacccgtgctgccgcacgggtcatatagtacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 17373260  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  17373261 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 17373360  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||||||| |||||||    
T  17373361 tttgttaaaattatatgtcaatattatatt 17373390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 49 - 253
Target Start/End: Original strand, 24223186 - 24223390
Alignment:
Q  49 ccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttg 148  Q
    ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||| ||||||||| ||||||||||||| |||||||| | |||||||    
T  24223186 ccgcacgggtcatatacatcgtagatgtagtagacaaaaacaaatctcaatgcatatgaaagagaatgaaatatgtggtcccaaatatatgcagatgttg 24223285  T
Q  149 gaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtt 248  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| | |||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  24223286 gaattcgaacctcagacaccacacttattcaccttaaaaatattactctttaccaatcgtgtgttacttcattcttttgttaaaagtatatgtcaatgtg 24223385  T
Q  249 atatt 253  Q
    |||||    
T  24223386 atatt 24223390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 63 - 253
Target Start/End: Complemental strand, 29275817 - 29275627
Alignment:
Q  63 tacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctca 162  Q
    ||||||||||||||  |||| ||||| |||| ||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||||||||||||||||    
T  29275817 tacattgtagatgtaatagacaaaaacaaatttcaatgcatatcaaagagaatgaaacatgtggtcccaaatatatgcagatgttggaattcgaacctca 29275718  T
Q  163 gacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29275717 gacaccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 29275627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 253
Target Start/End: Original strand, 6940545 - 6940729
Alignment:
Q  69 gtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacacc 168  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  6940545 gtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacacc 6940644  T
Q  169 acatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||| |||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  6940645 acacttattcacctgaaaaatattaatttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaacgttatatt 6940729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 62 - 253
Target Start/End: Original strand, 33570342 - 33570533
Alignment:
Q  62 atacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctc 161  Q
    ||||||||||||| | ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||    
T  33570342 atacattgtagatatagtagacaaaaacaaatctcaatgcataccaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctc 33570441  T
Q  162 agacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33570442 agacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatatt 33570533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 84 - 253
Target Start/End: Original strand, 1394543 - 1394712
Alignment:
Q  84 aaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcacttt 183  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||| |||||||| || ||||| ||    
T  1394543 aaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacttgttcacctt 1394642  T
Q  184 aaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1394643 aaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaatttatatgtcaatgttatatt 1394712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 78 - 253
Target Start/End: Original strand, 14141158 - 14141333
Alignment:
Q  78 gtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttatt 177  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||||||||  |||||    
T  14141158 gtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttatt 14141257  T
Q  178 cactttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14141258 caccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgccaatattatatt 14141333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 86 - 253
Target Start/End: Complemental strand, 17913911 - 17913744
Alignment:
Q  86 aaataaatctcaatgcatatcaaagagaataaaatatgtggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaa 185  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||||||||||||||| | |||||| |||||||| ||||    
T  17913911 aaataaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgtagatgttggaattcgaacctcaaataccacacttattcaccttaa 17913812  T
Q  186 aaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17913811 aaatattaatctttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 17913744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 40177270 - 40177127
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||| ||||||||| ||||||||||    
T  40177270 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatataaaagagaatgaaatatgtgg 40177171  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccac 170  Q
    ||| |||||||| | |||||||||||||||||||||||||||||    
T  40177170 tcccaaatatatgcagatgttggaattcgaacctcagacaccac 40177127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 1395950 - 1395907
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  1395950 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 1395907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 2399210 - 2399253
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  2399210 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 2399253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 5479158 - 5479115
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  5479158 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 5479115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 6940768 - 6940811
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  6940768 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 6940811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 8179753 - 8179808
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtaga 82  Q
    ||||||||||||||| ||||| |||||||| ||||||| ||||||||||| |||||    
T  8179753 actagactttccacccgtgctgccgcacggatcatatatattgtagatgtagtaga 8179808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 10729712 - 10729755
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  10729712 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 10729755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 14141377 - 14141420
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  14141377 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 14141420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 16526577 - 16526620
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  16526577 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 16526620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 17373434 - 17373477
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  17373434 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17373477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 20874647 - 20874604
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  20874647 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 20874604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 24223434 - 24223477
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  24223434 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 24223477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 27647888 - 27647845
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  27647888 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 27647845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 33570578 - 33570621
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  33570578 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 33570621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 34107608 - 34107651
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  34107608 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 34107651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 34110609 - 34110566
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  34110609 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 34110566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 38247135 - 38247178
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  38247135 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 38247178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 40177076 - 40177033
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  40177076 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 40177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 1394750 - 1394793
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||  |||||||||||    
T  1394750 tgttacttcattcttttgtaaaaattatatggtaatgttatatt 1394793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 25158594 - 25158637
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  25158594 tgttacttcattattttgtaaaaattatatgttaatgttatatt 25158637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 33375723 - 33375680
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  33375723 tgttacttcattattttgtaaaaattatatgttaatgttatatt 33375680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 19391299 - 19391258
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatataca 66  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  19391299 aaactagacttttcatccgtgctaccgcacgggtcatataca 19391258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 29275580 - 29275540
Alignment:
Q  213 tacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  29275580 tacttcattcttttgtaaaaaatatatgttaatgttatatt 29275540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 19579 - 19350
Alignment:
Q  24 taaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatg 123  Q
    |||||||||||||||||| ||||| ||| ||||||| |||||||||||||||| ||||| ||||| |||||||||||||||| ||||| ||| |||||||    
T  19579 taaactagactttccacccgtgctgccgtacgggtcctatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagataattaaatatg 19480  T
Q  124 tggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattct 223  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  19479 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattct 19380  T
Q  224 tttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||||||||||||    
T  19379 tttgttaaaattatatgtcaatgttatatt 19350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 46505 - 46277
Alignment:
Q  25 aaactagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgt 124  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  46505 aaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 46406  T
Q  125 ggtcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctt 224  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  46405 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 46306  T
Q  225 ttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||||| |||||||    
T  46305 ttgttaaaattatatgtcaatattatatt 46277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 149050 - 149276
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  149050 actagactttccacccgtgctgccgcacgggtcatataaattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 149149  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 226  Q
    ||| |||||||| | ||||||||||||||||| ||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  149150 tcccaaatatatgcagatgttggaattcgaacatcaaacacaacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 149249  T
Q  227 gttaaaattatatgtcaatgttatatt 253  Q
    |||||||||||||||||| ||||||||    
T  149250 gttaaaattatatgtcaacgttatatt 149276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 149318 - 149361
Alignment:
Q  210 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 253  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  149318 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 149361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 6061 - 6232
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||||||||    
T  6061 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaatgaaatatgtgg 6160  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttt 198  Q
    ||  |||||||| | ||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||    
T  6161 tctcaaatatatgcagatgttggaattcgaacctcaaacaccacacttattcatcttaaaaatattaatttt 6232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 6071 - 6242
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||||||||    
T  6071 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaatgaaatatgtgg 6170  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattcactttaaaaatattaatttt 198  Q
    ||  |||||||| | ||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||    
T  6171 tctcaaatatatgcagatgttggaattcgaacctcaaacaccacacttattcatcttaaaaatattaatttt 6242  T

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Target: scaffold0836 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 5278 - 5430
Alignment:
Q  27 actagactttccacctgtgctaccgcacgggtcatatacattgtagatgtggtagataaaaataaatctcaatgcatatcaaagagaataaaatatgtgg 126  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||| |  |||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  5278 actagactttccacccgtgctgccgcacgggacatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 5377  T
Q  127 tcctaaatatatactgatgttggaattcgaacctcagacaccacatttattca 179  Q
    ||| |||||||| | |||||||||||||||||||||||||||||  |||||||    
T  5378 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattca 5430  T

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