View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1295_high_44 (Length: 220)
Name: NF1295_high_44
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1295_high_44 |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 412226 - 412365
Alignment:
| Q |
1 |
gtgagagttttcatttcagtcttaaactaactcgcaatatttcacatttcatttcattactataaagtaaacattgaaaacctctattcgttatttctct |
100 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
412226 |
gtgagagttttcatttcagtcttaaactaactcacaatatttcacatttcatttcattactataaagtaaacattgaaaacctctattcattatttctct |
412325 |
T |
|
| Q |
101 |
ccactcaacaattaatacacacattcaaacctctcttcat |
140 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
412326 |
ccactcaacaattaatacacacattcaaacctctcttcat |
412365 |
T |
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