View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1295_low_37 (Length: 288)
Name: NF1295_low_37
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1295_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 5 - 283
Target Start/End: Complemental strand, 42451040 - 42450762
Alignment:
| Q |
5 |
gacagaaaagaatcaacaataaataagggactaaaacacgctttagaaccctactcctaggaacaatgtaaaggatcaagcaacatgcttgttccatctc |
104 |
Q |
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| T |
42451040 |
gacagaaaagaatcaacaataaataagggactaaaacacgctttagaaccctactcctaggaacaatgtaaaggatcaagcaacatgcttgttccatctc |
42450941 |
T |
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| Q |
105 |
ttcctagaaattaagaatcagaaatcaacctaaaaatccaaactaacaaaccacacatcaaatcagttttcttcaacaacacaaagagcatctaattatt |
204 |
Q |
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| T |
42450940 |
ttcctagaaattaagaatcagaaatcaacctaaaaatccaaactaacaaaccacacatcaaatcagttttcttcaacaacacaaagagcatctaattatt |
42450841 |
T |
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| Q |
205 |
ccattttcattgcaataaccacacttaaccgttttcttttgcttctcatccaaaaccttacaacttccattacattcct |
283 |
Q |
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| T |
42450840 |
ccattttcattgcaataaccacacttaaccgttttcttttgcttctcatccaaaaccttacaacttccattacattcct |
42450762 |
T |
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