View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1295_low_39 (Length: 269)

Name: NF1295_low_39
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1295_low_39
NF1295_low_39
[»] chr1 (81 HSPs)
chr1 (43-238)||(51291433-51291628)
chr1 (43-239)||(46909428-46909620)
chr1 (43-238)||(9618749-9618941)
chr1 (41-238)||(26769192-26769386)
chr1 (152-238)||(26606912-26606998)
chr1 (43-233)||(28456481-28456669)
chr1 (53-238)||(49502142-49502324)
chr1 (152-238)||(39895097-39895183)
chr1 (49-238)||(7943760-7943947)
chr1 (41-238)||(49875186-49875383)
chr1 (152-238)||(4883414-4883500)
chr1 (152-238)||(7820689-7820775)
chr1 (152-238)||(18609294-18609380)
chr1 (152-238)||(21700694-21700780)
chr1 (152-238)||(45780329-45780415)
chr1 (43-234)||(35254570-35254760)
chr1 (152-238)||(6328744-6328830)
chr1 (152-238)||(19914658-19914744)
chr1 (152-238)||(30194610-30194696)
chr1 (152-238)||(37991759-37991845)
chr1 (152-238)||(43011951-43012037)
chr1 (152-238)||(49661606-49661692)
chr1 (152-238)||(586408-586494)
chr1 (152-238)||(27649867-27649953)
chr1 (152-234)||(44726504-44726586)
chr1 (152-238)||(45780786-45780871)
chr1 (158-238)||(23442412-23442492)
chr1 (152-231)||(7820238-7820317)
chr1 (41-238)||(35255149-35255344)
chr1 (152-238)||(641159-641245)
chr1 (152-238)||(26607344-26607429)
chr1 (152-238)||(46908509-46908595)
chr1 (152-238)||(47652877-47652963)
chr1 (152-238)||(50683337-50683422)
chr1 (43-238)||(39896407-39896601)
chr1 (153-236)||(51290464-51290546)
chr1 (152-234)||(49502687-49502768)
chr1 (43-132)||(4883264-4883353)
chr1 (43-132)||(23442302-23442391)
chr1 (43-238)||(27649284-27649474)
chr1 (43-130)||(30195342-30195429)
chr1 (156-238)||(26770440-26770521)
chr1 (47-132)||(50683805-50683890)
chr1 (43-123)||(18609122-18609202)
chr1 (38-130)||(49660849-49660941)
chr1 (43-130)||(37992505-37992592)
chr1 (46-132)||(18609184-18609270)
chr1 (152-238)||(30287835-30287921)
chr1 (46-132)||(37991613-37991699)
chr1 (43-130)||(585682-585768)
chr1 (43-132)||(30194452-30194540)
chr1 (43-132)||(47653661-47653749)
chr1 (43-123)||(28456683-28456763)
chr1 (152-204)||(51461764-51461816)
chr1 (46-124)||(51290353-51290431)
chr1 (43-132)||(19914497-19914585)
chr1 (152-214)||(49875113-49875177)
chr1 (67-130)||(43012659-43012722)
chr1 (49-131)||(44726403-44726486)
chr1 (45-132)||(47652727-47652814)
chr1 (43-132)||(586560-586647)
chr1 (43-132)||(21700799-21700888)
chr1 (83-132)||(30287768-30287817)
chr1 (171-238)||(35719358-35719425)
chr1 (83-132)||(45780888-45780937)
chr1 (83-132)||(49661712-49661761)
chr1 (83-132)||(43011839-43011888)
chr1 (71-132)||(46908421-46908482)
chr1 (38-129)||(49502785-49502869)
chr1 (71-124)||(49875037-49875090)
chr1 (152-192)||(45943653-45943693)
chr1 (83-131)||(51461833-51461881)
chr1 (83-130)||(50683271-50683318)
chr1 (94-132)||(26606847-26606885)
chr1 (41-75)||(46341677-46341711)
chr1 (83-132)||(641094-641143)
chr1 (95-132)||(7820177-7820214)
chr1 (95-132)||(19915298-19915335)
chr1 (38-75)||(26606824-26606861)
chr1 (95-132)||(45780279-45780316)
chr1 (88-132)||(6328846-6328890)
[»] chr2 (70 HSPs)
chr2 (41-238)||(4014293-4014491)
chr2 (43-238)||(4014958-4015148)
chr2 (41-235)||(29905487-29905676)
chr2 (152-238)||(28420001-28420087)
chr2 (43-238)||(6233425-6233620)
chr2 (43-238)||(43328970-43329163)
chr2 (152-238)||(2528793-2528879)
chr2 (152-238)||(10425025-10425111)
chr2 (41-234)||(7780191-7780381)
chr2 (152-238)||(29947950-29948036)
chr2 (152-238)||(30802821-30802907)
chr2 (152-238)||(37321303-37321389)
chr2 (152-238)||(39489357-39489443)
chr2 (152-238)||(40157335-40157421)
chr2 (153-238)||(33002177-33002262)
chr2 (38-238)||(2529259-2529454)
chr2 (152-238)||(7779746-7779831)
chr2 (152-238)||(39211442-39211528)
chr2 (152-234)||(40969497-40969578)
chr2 (43-234)||(9088743-9088926)
chr2 (47-238)||(9089286-9089471)
chr2 (152-241)||(33002090-33002178)
chr2 (152-224)||(40156542-40156614)
chr2 (152-234)||(36510670-36510752)
chr2 (152-238)||(38779503-38779589)
chr2 (152-238)||(39210992-39211077)
chr2 (152-238)||(39461982-39462068)
chr2 (152-238)||(39462401-39462486)
chr2 (155-238)||(2270985-2271067)
chr2 (152-231)||(15488027-15488106)
chr2 (152-238)||(41272716-41272802)
chr2 (152-238)||(41273095-41273181)
chr2 (43-132)||(29600791-29600880)
chr2 (152-231)||(39186164-39186243)
chr2 (44-132)||(43329259-43329347)
chr2 (41-124)||(39489212-39489295)
chr2 (46-132)||(10424873-10424959)
chr2 (43-123)||(28420179-28420259)
chr2 (43-130)||(10425774-10425861)
chr2 (43-130)||(30802071-30802158)
chr2 (46-129)||(38340808-38340891)
chr2 (152-238)||(39186602-39186691)
chr2 (43-132)||(12252150-12252240)
chr2 (46-132)||(28420111-28420197)
chr2 (43-132)||(30802971-30803060)
chr2 (43-132)||(36510809-36510898)
chr2 (56-131)||(29948719-29948794)
chr2 (58-132)||(29947813-29947887)
chr2 (152-222)||(35935293-35935363)
chr2 (71-132)||(2528702-2528763)
chr2 (43-132)||(38779603-38779685)
chr2 (152-198)||(16741318-16741364)
chr2 (65-131)||(37321220-37321286)
chr2 (152-209)||(43329188-43329243)
chr2 (152-188)||(12252260-12252296)
chr2 (83-131)||(33002289-33002337)
chr2 (43-99)||(39489952-39490008)
chr2 (68-130)||(36509965-36510028)
chr2 (65-132)||(39186077-39186144)
chr2 (65-123)||(39033118-39033176)
chr2 (83-132)||(39211541-39211590)
chr2 (47-132)||(39462501-39462586)
chr2 (91-132)||(40156481-40156522)
chr2 (43-132)||(40969596-40969685)
chr2 (169-217)||(10472779-10472827)
chr2 (41-71)||(25515822-25515852)
chr2 (88-130)||(39210926-39210968)
chr2 (83-124)||(33002029-33002070)
chr2 (43-79)||(33416927-33416963)
chr2 (94-122)||(40156448-40156476)
[»] chr8 (70 HSPs)
chr8 (43-238)||(25994477-25994672)
chr8 (43-238)||(3695398-3695592)
chr8 (41-238)||(41859054-41859244)
chr8 (152-238)||(30026110-30026196)
chr8 (152-238)||(34798684-34798770)
chr8 (43-238)||(36345034-36345226)
chr8 (43-238)||(43519933-43520118)
chr8 (152-238)||(2334943-2335029)
chr8 (152-238)||(44934045-44934131)
chr8 (152-238)||(45410015-45410101)
chr8 (152-238)||(2712541-2712627)
chr8 (152-238)||(27501782-27501868)
chr8 (152-238)||(32584244-32584330)
chr8 (152-238)||(38604047-38604133)
chr8 (152-238)||(41858632-41858717)
chr8 (152-238)||(45410798-45410884)
chr8 (43-238)||(38133201-38133395)
chr8 (152-236)||(3695958-3696042)
chr8 (152-238)||(915474-915560)
chr8 (152-238)||(10749513-10749599)
chr8 (152-238)||(28617746-28617832)
chr8 (152-238)||(31185284-31185370)
chr8 (152-238)||(36314028-36314114)
chr8 (152-238)||(36314179-36314265)
chr8 (152-238)||(43363059-43363145)
chr8 (152-238)||(45252447-45252533)
chr8 (152-236)||(23512618-23512702)
chr8 (152-238)||(2712985-2713070)
chr8 (152-238)||(5532827-5532913)
chr8 (152-234)||(23512184-23512266)
chr8 (152-238)||(25994990-25995075)
chr8 (43-132)||(43363213-43363302)
chr8 (152-235)||(21248309-21248391)
chr8 (152-238)||(22960758-22960843)
chr8 (164-238)||(34502986-34503060)
chr8 (43-132)||(31745942-31746031)
chr8 (43-132)||(38604201-38604290)
chr8 (43-130)||(27502523-27502610)
chr8 (43-132)||(40745237-40745326)
chr8 (171-238)||(4528285-4528352)
chr8 (152-223)||(4529127-4529197)
chr8 (152-238)||(43263133-43263219)
chr8 (43-132)||(44886753-44886842)
chr8 (43-131)||(27501631-27501719)
chr8 (43-130)||(2335103-2335190)
chr8 (152-234)||(4394882-4394964)
chr8 (44-130)||(43362343-43362429)
chr8 (47-234)||(30025046-30025230)
chr8 (43-131)||(32584083-32584170)
chr8 (43-130)||(914748-914834)
chr8 (43-132)||(5532981-5533067)
chr8 (45-132)||(31185431-31185518)
chr8 (41-130)||(38603339-38603428)
chr8 (43-132)||(42732733-42732822)
chr8 (43-132)||(44933890-44933979)
chr8 (43-130)||(28618395-28618481)
chr8 (43-129)||(2712433-2712519)
chr8 (44-130)||(44841829-44841915)
chr8 (44-132)||(45252554-45252641)
chr8 (43-132)||(28617599-28617686)
chr8 (43-132)||(21248203-21248292)
chr8 (83-132)||(41858567-41858616)
chr8 (46-132)||(915624-915707)
chr8 (83-130)||(32584974-32585021)
chr8 (83-132)||(30026213-30026262)
chr8 (44-120)||(35645950-35646029)
chr8 (83-132)||(34798790-34798839)
chr8 (93-122)||(39207684-39207713)
chr8 (152-192)||(44841768-44841808)
chr8 (91-123)||(45409953-45409985)
[»] chr7 (63 HSPs)
chr7 (43-238)||(29097714-29097902)
chr7 (43-238)||(47750555-47750746)
chr7 (44-238)||(30471393-30471585)
chr7 (45-234)||(32606801-32606991)
chr7 (43-238)||(26833322-26833516)
chr7 (43-238)||(29112963-29113154)
chr7 (152-238)||(5026673-5026759)
chr7 (152-238)||(28564423-28564509)
chr7 (152-238)||(31512437-31512523)
chr7 (152-238)||(35839508-35839594)
chr7 (152-238)||(48000330-48000416)
chr7 (43-226)||(30468481-30468659)
chr7 (152-238)||(25195377-25195463)
chr7 (152-238)||(27657163-27657249)
chr7 (152-238)||(42582867-42582953)
chr7 (152-238)||(38265964-38266050)
chr7 (152-238)||(46908298-46908384)
chr7 (152-238)||(48900995-48901081)
chr7 (155-238)||(7953624-7953707)
chr7 (155-238)||(38265548-38265631)
chr7 (152-238)||(29112477-29112562)
chr7 (43-238)||(35839974-35840165)
chr7 (152-238)||(42794954-42795040)
chr7 (152-238)||(49140846-49140932)
chr7 (152-224)||(12027480-12027552)
chr7 (154-238)||(34508702-34508785)
chr7 (43-130)||(49141576-49141663)
chr7 (152-234)||(12080599-12080680)
chr7 (152-238)||(19073432-19073517)
chr7 (152-234)||(38083979-38084060)
chr7 (43-132)||(42583013-42583102)
chr7 (43-132)||(49140684-49140773)
chr7 (43-130)||(46907567-46907654)
chr7 (43-132)||(8000-8089)
chr7 (45-130)||(12210545-12210630)
chr7 (43-130)||(7100-7187)
chr7 (43-130)||(42794224-42794311)
chr7 (46-123)||(42582146-42582223)
chr7 (55-132)||(27657942-27658019)
chr7 (46-130)||(28563692-28563776)
chr7 (43-130)||(45791336-45791423)
chr7 (51-132)||(12080487-12080568)
chr7 (71-132)||(25195304-25195365)
chr7 (57-130)||(48900902-48900975)
chr7 (83-132)||(5026606-5026655)
chr7 (83-132)||(26832849-26832898)
chr7 (41-132)||(38266064-38266148)
chr7 (83-132)||(46908452-46908501)
chr7 (152-200)||(26832920-26832968)
chr7 (58-130)||(38084715-38084787)
chr7 (177-225)||(48901390-48901437)
chr7 (152-203)||(25195846-25195897)
chr7 (41-100)||(48000247-48000306)
chr7 (50-132)||(19073530-19073612)
chr7 (58-124)||(38083840-38083906)
chr7 (41-132)||(7953720-7953804)
chr7 (43-79)||(48901448-48901484)
chr7 (93-132)||(12027423-12027462)
chr7 (43-81)||(12080449-12080487)
chr7 (88-132)||(12081175-12081219)
chr7 (88-132)||(31512379-31512423)
chr7 (152-192)||(42024397-42024437)
chr7 (152-192)||(42025013-42025053)
[»] chr4 (77 HSPs)
chr4 (43-234)||(1735946-1736133)
chr4 (44-234)||(32537544-32537729)
chr4 (44-238)||(9655223-9655415)
chr4 (45-238)||(37295263-37295456)
chr4 (41-238)||(9655759-9655953)
chr4 (46-238)||(21343223-21343416)
chr4 (152-238)||(28234582-28234668)
chr4 (154-238)||(16473531-16473615)
chr4 (152-238)||(11566676-11566762)
chr4 (152-238)||(28320640-28320726)
chr4 (43-238)||(40240220-40240415)
chr4 (46-238)||(1735403-1735593)
chr4 (49-238)||(28157615-28157803)
chr4 (152-231)||(28235394-28235473)
chr4 (152-238)||(14200748-14200834)
chr4 (152-238)||(16472666-16472752)
chr4 (152-238)||(21342834-21342919)
chr4 (152-238)||(36479929-36480015)
chr4 (152-238)||(40833408-40833494)
chr4 (152-238)||(50447190-50447276)
chr4 (152-238)||(51037257-51037343)
chr4 (152-238)||(56566506-56566592)
chr4 (43-238)||(28321968-28322162)
chr4 (152-238)||(29307307-29307393)
chr4 (152-238)||(38368991-38369077)
chr4 (152-238)||(46254251-46254337)
chr4 (152-238)||(46561829-46561915)
chr4 (152-238)||(55587538-55587624)
chr4 (152-238)||(56565921-56566006)
chr4 (43-238)||(36480385-36480582)
chr4 (43-234)||(46169057-46169243)
chr4 (152-238)||(40963567-40963652)
chr4 (43-238)||(35631194-35631387)
chr4 (152-235)||(7485467-7485550)
chr4 (152-231)||(42528976-42529054)
chr4 (152-238)||(7087988-7088073)
chr4 (152-238)||(45971644-45971730)
chr4 (152-238)||(46561406-46561492)
chr4 (43-132)||(40240663-40240752)
chr4 (43-132)||(46254401-46254490)
chr4 (43-130)||(14201485-14201572)
chr4 (45-132)||(29307448-29307535)
chr4 (155-228)||(33812746-33812818)
chr4 (152-229)||(55704624-55704701)
chr4 (43-131)||(40833564-40833652)
chr4 (43-130)||(40832674-40832761)
chr4 (43-132)||(14200592-14200680)
chr4 (43-132)||(51037421-51037510)
chr4 (174-238)||(40239785-40239849)
chr4 (43-130)||(38368259-38368345)
chr4 (43-130)||(50447039-50447127)
chr4 (43-130)||(23221626-23221712)
chr4 (43-103)||(12376016-12376076)
chr4 (68-132)||(21342748-21342812)
chr4 (43-123)||(55587386-55587465)
chr4 (152-203)||(46165859-46165910)
chr4 (152-210)||(12376106-12376164)
chr4 (45-130)||(29306560-29306645)
chr4 (50-130)||(7484764-7484844)
chr4 (43-132)||(7485616-7485703)
chr4 (43-110)||(46253514-46253581)
chr4 (43-132)||(23220709-23220796)
chr4 (43-132)||(38369137-38369224)
chr4 (152-198)||(40240595-40240641)
chr4 (71-132)||(7087911-7087972)
chr4 (83-132)||(40963668-40963717)
chr4 (71-132)||(53536022-53536083)
chr4 (45-124)||(16473638-16473720)
chr4 (88-132)||(28320575-28320619)
chr4 (161-231)||(55704263-55704331)
chr4 (47-132)||(28234477-28234565)
chr4 (83-132)||(40239669-40239718)
chr4 (152-189)||(40239735-40239772)
chr4 (88-132)||(11566780-11566824)
chr4 (47-124)||(56565818-56565898)
chr4 (89-130)||(55588251-55588292)
chr4 (152-192)||(9473587-9473627)
[»] chr3 (79 HSPs)
chr3 (43-238)||(11269339-11269533)
chr3 (43-238)||(32743999-32744194)
chr3 (47-238)||(19843252-19843442)
chr3 (43-238)||(40798814-40799006)
chr3 (152-238)||(42148877-42148963)
chr3 (43-238)||(55175690-55175880)
chr3 (152-236)||(52514907-52514991)
chr3 (152-238)||(6144182-6144268)
chr3 (152-238)||(51755359-51755445)
chr3 (43-238)||(40798281-40798472)
chr3 (152-238)||(4014950-4015036)
chr3 (152-238)||(11249323-11249409)
chr3 (152-238)||(16851872-16851958)
chr3 (155-232)||(4331662-4331739)
chr3 (153-238)||(21342979-21343064)
chr3 (154-238)||(10492228-10492312)
chr3 (152-238)||(4014631-4014717)
chr3 (152-238)||(11094300-11094386)
chr3 (152-238)||(27739370-27739456)
chr3 (152-238)||(36719328-36719414)
chr3 (152-238)||(52514428-52514513)
chr3 (152-238)||(55176236-55176322)
chr3 (152-238)||(31977800-31977885)
chr3 (152-238)||(34542931-34543017)
chr3 (152-224)||(4330871-4330943)
chr3 (45-238)||(21343313-21343508)
chr3 (152-231)||(12897988-12898067)
chr3 (152-231)||(39998825-39998904)
chr3 (152-238)||(40877661-40877747)
chr3 (152-238)||(51753711-51753796)
chr3 (43-132)||(2063160-2063249)
chr3 (43-132)||(28816954-28817043)
chr3 (43-130)||(11248585-11248672)
chr3 (41-130)||(11095042-11095131)
chr3 (152-233)||(15294663-15294744)
chr3 (152-217)||(28816822-28816887)
chr3 (43-131)||(19988587-19988675)
chr3 (43-132)||(11249478-11249566)
chr3 (152-213)||(14016611-14016672)
chr3 (43-132)||(19341075-19341164)
chr3 (152-207)||(8475995-8476050)
chr3 (41-132)||(14042949-14043040)
chr3 (43-131)||(34543089-34543178)
chr3 (163-238)||(22935520-22935596)
chr3 (43-130)||(34542184-34542271)
chr3 (43-200)||(42148323-42148478)
chr3 (43-132)||(10492058-10492148)
chr3 (152-230)||(19341484-19341560)
chr3 (47-132)||(31977691-31977776)
chr3 (45-132)||(4331770-4331860)
chr3 (43-130)||(12898645-12898732)
chr3 (43-130)||(26245363-26245450)
chr3 (43-130)||(27738636-27738722)
chr3 (43-102)||(40872102-40872161)
chr3 (188-238)||(19341429-19341479)
chr3 (43-132)||(27739522-27739609)
chr3 (163-238)||(27296956-27297028)
chr3 (45-132)||(16852017-16852103)
chr3 (43-124)||(11094142-11094222)
chr3 (83-132)||(14016688-14016737)
chr3 (47-111)||(16851158-16851222)
chr3 (43-130)||(52514319-52514409)
chr3 (178-230)||(53643602-53643654)
chr3 (152-192)||(55282753-55282793)
chr3 (47-132)||(8475887-8475975)
chr3 (41-132)||(40877759-40877843)
chr3 (176-229)||(47443591-47443644)
chr3 (83-131)||(21342913-21342961)
chr3 (168-227)||(53642909-53642968)
chr3 (94-132)||(10492859-10492897)
chr3 (43-93)||(21343486-21343536)
chr3 (94-132)||(52515007-52515045)
chr3 (45-118)||(11016764-11016837)
chr3 (43-75)||(6144308-6144340)
chr3 (43-79)||(12897855-12897891)
chr3 (94-130)||(19341582-19341618)
chr3 (43-75)||(19341604-19341636)
chr3 (152-192)||(33471573-33471613)
chr3 (94-130)||(55176336-55176372)
[»] scaffold1644 (1 HSPs)
scaffold1644 (44-238)||(1143-1336)
[»] chr6 (35 HSPs)
chr6 (38-238)||(17337674-17337876)
chr6 (152-238)||(6760673-6760759)
chr6 (43-234)||(15545758-15545951)
chr6 (152-238)||(26350916-26351002)
chr6 (152-238)||(32396048-32396134)
chr6 (50-238)||(2109580-2109769)
chr6 (152-231)||(32396713-32396792)
chr6 (152-238)||(117371-117457)
chr6 (152-238)||(13158529-13158615)
chr6 (152-238)||(13163385-13163471)
chr6 (152-238)||(26350113-26350199)
chr6 (152-238)||(455886-455971)
chr6 (152-238)||(3177657-3177743)
chr6 (152-238)||(8708104-8708190)
chr6 (152-238)||(32552620-32552705)
chr6 (43-130)||(13164215-13164302)
chr6 (43-132)||(6760825-6760914)
chr6 (152-207)||(455514-455569)
chr6 (43-130)||(2110410-2110497)
chr6 (152-231)||(7677990-7678068)
chr6 (43-132)||(25554736-25554824)
chr6 (152-234)||(35097412-35097490)
chr6 (38-132)||(455997-456091)
chr6 (43-130)||(32396809-32396896)
chr6 (153-219)||(29359005-29359071)
chr6 (68-132)||(7677901-7677965)
chr6 (83-132)||(117303-117352)
chr6 (83-132)||(8708020-8708069)
chr6 (45-133)||(26350007-26350098)
chr6 (47-119)||(15871817-15871889)
chr6 (68-130)||(6760045-6760107)
chr6 (67-132)||(32552539-32552604)
chr6 (49-132)||(32395946-32396032)
chr6 (152-190)||(35242019-35242057)
chr6 (94-123)||(8193204-8193233)
[»] chr5 (22 HSPs)
chr5 (41-238)||(41065913-41066102)
chr5 (152-238)||(18563783-18563869)
chr5 (152-238)||(35651466-35651552)
chr5 (152-238)||(42912273-42912359)
chr5 (38-238)||(8679586-8679782)
chr5 (43-233)||(8680096-8680288)
chr5 (155-238)||(20509392-20509475)
chr5 (152-238)||(3891668-3891754)
chr5 (152-234)||(20743237-20743318)
chr5 (43-130)||(3892395-3892482)
chr5 (44-132)||(20509504-20509592)
chr5 (163-237)||(5099487-5099561)
chr5 (152-238)||(22212116-22212201)
chr5 (156-238)||(41066446-41066527)
chr5 (43-132)||(3891514-3891602)
chr5 (152-192)||(35281912-35281952)
chr5 (83-132)||(35651570-35651619)
chr5 (83-132)||(42912201-42912250)
chr5 (84-132)||(41066544-41066592)
chr5 (183-231)||(5099799-5099847)
chr5 (43-91)||(13707925-13707973)
chr5 (152-192)||(25983471-25983511)
[»] scaffold0016 (3 HSPs)
scaffold0016 (152-238)||(69018-69104)
scaffold0016 (43-130)||(68409-68496)
scaffold0016 (44-132)||(69174-69262)
[»] scaffold0019 (2 HSPs)
scaffold0019 (43-132)||(134267-134356)
scaffold0019 (152-184)||(134219-134251)
[»] scaffold0283 (1 HSPs)
scaffold0283 (43-132)||(559-648)
[»] scaffold0504 (2 HSPs)
scaffold0504 (152-187)||(12556-12591)
scaffold0504 (47-132)||(12443-12531)


Alignment Details
Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 51291628 - 51291433
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| ||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||||| |||||||              
T  51291628 ctgcagttaactaccgaggaaaacttcggcagtaaactatcaaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacctgtttttttt 51291529  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  51291528 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtaagttttaaacaattgcagtat 51291433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 46909620 - 46909428
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||| ||||||| ||||||||||||||| | |||| ||||||||||||||||||||||||||||||| ||||| |||||||              
T  46909620 ctgcagttaactatcgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcgacagttaactgccgatgaaacctcaaacc---tgttttt 46909524  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtata 239  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  46909523 atttttttgacaaaaaccataaattgtcattaataatatttattgattttaaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtata 46909428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 9618749 - 9618941
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| |||||||||||||||   |||| |||||||||||||||| |||||||||| ||||||||| |||||||              
T  9618749 ctgcagttaactaccgaggaaaacttcggcagtaaactcccgaggaaaactgaaaacttcggcagttaactgtcgaggaaacctcaaacc---tatattt 9618845  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9618846 ttttttttgacaaaaatcataaattatcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 9618941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 41 - 238
Target Start/End: Original strand, 26769192 - 26769386
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnn 140  Q
    ||||||||||||||||| ||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||| |             
T  26769192 gactgcagttaactacccaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaacc---tgtttt 26769288  T
Q  141 nnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  26769289 ttttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgttcaaaacaattgcagtat 26769386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 26606912 - 26606998
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26606912 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 26606998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 233
Target Start/End: Original strand, 28456481 - 28456669
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||| ||||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||||||| |||||||              
T  28456481 ctgcagttaactatcgaggaaaacttcggcagtaaactaccgagaaaaactgaaaacttcggcagttaactgccaaggaaacctcaaacc-tattttttt 28456579  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgc 233  Q
             |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  28456580 ttttttttgacaaaaaccataaattatcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgc 28456669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 238
Target Start/End: Original strand, 49502142 - 49502324
Alignment:
Q  53 ctaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnnnnnnnna 152  Q
    ||||||||||| ||||||||||||||| | |||  |||||||||||||||| |||||||||||||||||||| |||||||                   |    
T  49502142 ctaccgaggaaaacttcggcagtaaactaccgatgaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc---tgtttttttttttttga 49502238  T
Q  153 caaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49502239 caaaaaatataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 49502324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 39895097 - 39895183
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39895097 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 39895183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 7943947 - 7943760
Alignment:
Q  49 ttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnnnnn 148  Q
    ||||||| ||||||| |||| |||||||||| |  ||| |||||||||||||||| |||||||||||||||||||| ||||||                     
T  7943947 ttaactatcgaggaaaactttggcagtaaactacagaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaac--gtttttttttttttt 7943850  T
Q  149 nnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
       |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7943849 ttgacaaaatccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 7943760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 238
Target Start/End: Complemental strand, 49875383 - 49875186
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnn 140  Q
    ||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||  ||||||            
T  49875383 gactgcagttaactatcgaggaaaacttcggcagtaaactaccgagaaaaactgaaaacttcggcagttaactgccaaggaaaccccaaacctgtttttt 49875284  T
Q  141 nnnnnnnnnnn-acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
                ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||    
T  49875283 tttttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgcttcaatcattatttt-gtacgttacaaacaattgcagtat 49875186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 4883414 - 4883500
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4883414 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 4883500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 7820775 - 7820689
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7820775 acaaaaaccataaattgtcattattaatatttattgattttaaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 7820689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 18609294 - 18609380
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18609294 acaaaatccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 18609380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 21700780 - 21700694
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  21700780 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgtagtat 21700694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 45780329 - 45780415
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45780329 acaaaaatcataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 45780415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 35254570 - 35254760
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||||||||| || ||||||||||||||  || ||| ||||||||||||||||||||| |||| | |||||||| | ||| ||             
T  35254570 ctgcagttaactaccgagaaaaacttcggcagtaaaatattgaggaaaactgaaaacttcgacagtaaactacagaggaaaccttaaatcagtttttttt 35254669  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  35254670 tttttttg-acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatctttattttggtacgtttcaaacaattgca 35254760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 6328830 - 6328744
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6328830 acaaaaatcataaattgttattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 6328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 19914658 - 19914744
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  19914658 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttgatacgtttcaaacaattgcagtat 19914744  T

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Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 30194610 - 30194696
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  30194610 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 30194696  T

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Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 37991759 - 37991845
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37991759 acaaaaaccataaattatctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 37991845  T

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Target: chr1; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 43011951 - 43012037
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  43011951 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 43012037  T

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Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 49661692 - 49661606
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  49661692 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttgatacgtttcaaacaattgcagtat 49661606  T

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Target: chr1; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 586494 - 586408
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  586494 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattggagtat 586408  T

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Target: chr1; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 27649953 - 27649867
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  27649953 acaaaaaccataaattgttattaataaaatttattgattttgaatgtttcaatcattattttgatacgtttcaaacaattgcagtat 27649867  T

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Target: chr1; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 44726504 - 44726586
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  44726504 acaaaaaccataaattgtcattaataatatttattgatttcgaatgtttcaatcattattttagtacgtttcaaacaattgca 44726586  T

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Target: chr1; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 45780871 - 45780786
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  45780871 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttaaaacaattgcagtat 45780786  T

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Target: chr1; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 23442412 - 23442492
Alignment:
Q  158 accataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  23442412 accataaattatcattaataatatttattgattttgaatgtttcaatcattattttagtacgtttcaaacaattgcagtat 23442492  T

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Target: chr1; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 7820238 - 7820317
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7820238 acaaaaaccataaattatcattattaatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaatt 7820317  T

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Target: chr1; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 238
Target Start/End: Complemental strand, 35255344 - 35255149
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnn 140  Q
    ||||||||||||||||||| ||| |||||  |||||||| | |||| ||||||||||||||||  ||||||||||||||||||| |||||||            
T  35255344 gactgcagttaactaccgacgaaaacttcaacagtaaactaccgaggaaaactgaaaacttcggtagttaactgccgaggaaacctcaaacc-tgttttt 35255246  T
Q  141 nnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
               |||||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  35255245 ttttttgttcgacaaaaactataaattgttgttaataatatttattgattttgaatgtttcaatcattatttt-ttacgtttcaaacaattgcagtat 35255149  T

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Target: chr1; HSP #30
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 641159 - 641245
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||| |||||    
T  641159 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaataattattttggttcgtttcaaaccattgtagtat 641245  T

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Target: chr1; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 26607429 - 26607344
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  26607429 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaattattatttt-gtacgtttcaaacaattgtagtat 26607344  T

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Target: chr1; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 46908509 - 46908595
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  46908509 acaaaaatcataaattatcattaataatatttattgattttgaatgcttcaatcattattttggtacgtttcaaacaattgtagtat 46908595  T

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Target: chr1; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 47652877 - 47652963
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||  |||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  47652877 acaaaaagtataaattgtctttaataatatttattgattttgaatgtttcaatcattattttgggacgtttcaaacaattgcagtat 47652963  T

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Target: chr1; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 50683337 - 50683422
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  50683337 acaaaaatcataaattgtcactaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 50683422  T

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Target: chr1; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 39896601 - 39896407
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||||| || ||| ||||||||| ||||| | ||||||||||||||||||||| |||||||||||||| ||||| ||||||               
T  39896601 ctgcagttaactactgatgaaaacttcggcaataaactaccgagaaaaactgaaaacttcggcagttaactgccgatgaaacctcaaacttgtttttttt 39896502  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             || |||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| |||||||||||||||||| |||||    
T  39896501 ttttttttgaccaaaaccataaattgtcattaataatacttattgattttgaatatttcgatcattatttt-gtacgtttcaaacaattgtagtat 39896407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 51290464 - 51290546
Alignment:
Q  153 caaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagt 236  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  51290464 caaaaaccataaattatcattaataatatttattgattttgaatgtttcaattattatttt-gtacgtttcaaacaattgcagt 51290546  T

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Target: chr1; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 49502768 - 49502687
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| |||||||||||||||    
T  49502768 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttgaatcattatttt-gtacatttcaaacaattgca 49502687  T

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Target: chr1; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 4883264 - 4883353
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  4883264 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 4883353  T

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Target: chr1; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 23442302 - 23442391
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||| ||||||| ||||||||||||||| || ||| |||||| |||||||||||||||||||||||||||||| |||||||    
T  23442302 ctgcagttaactatcgaggaaaacttcggcagtaaactattgaggaaaactaaaaacttcgacagttaactgccgaggaaacctcaaacc 23442391  T

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Target: chr1; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 27649284 - 27649474
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| |||||| |||||||| | |||| |||||| |||| |||| |||||||||||||| ||||| |||||||              
T  27649284 ctgcagttaactaccgaggaaaacttcgacagtaaactaccgaggaaaactaaaaagttcggcagttaactgccgaagaaacctcaaacc----tgtttt 27649379  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| |||||||||    
T  27649380 tttttttttacaaaaaccataaattgtacttaataatatttattgattttgaatgtttccatcattatttt-gtacgattcaaacagttgcagtat 27649474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 30195429 - 30195342
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  30195429 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 30195342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 26770521 - 26770440
Alignment:
Q  156 aaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||||||||    
T  26770521 aaaccataaattatcattaataatatttattgattttgaatgttacaatcattatttt-gtatgtttcaaacaattgcagtat 26770440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 50683890 - 50683805
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||| | ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  50683890 agttaactaccgtggaaaatttcggcagtaaactaccgagaaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 50683805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 18609122 - 18609202
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaa 123  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||||||    
T  18609122 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctacagttaactgccgaggaaa 18609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 49660849 - 49660941
Alignment:
Q  38 actgactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||| |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||| |||||    
T  49660849 actggctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaa 49660941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 37992592 - 37992505
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||| |||||    
T  37992592 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaa 37992505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 18609184 - 18609270
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||| |||||||    
T  18609184 cagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaacc 18609270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 30287835 - 30287921
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| | ||||||||| ||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||| ||||||    
T  30287835 acaaaaatcctaaattgtctttaataatatttattgatttcgaatgtttcaatcattattttaatacgtttcaaacaattccagtat 30287921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 37991613 - 37991699
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| |||||||| ||||||||||||||| | |||| ||||||||||| |||| |||||||||||||||||||| |||||||    
T  37991613 cagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaatttcggcagttaactgccgaggaaacctcaaacc 37991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 585682 - 585768
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||| |||||||||||| |||||||||||||||||||| |||||    
T  585682 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaa-ctgaaaacttcggcagttaactgccgaggaaacctcaaa 585768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 30194452 - 30194540
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | | || ||||||| |||||||| |||||||||||||||||||| |||||||    
T  30194452 ctgcagttaactgccgaggaaaacttcggcagtaaactaccaaggaaaactg-aaacttcggcagttaactgccgaggaaacctcaaacc 30194540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 47653749 - 47653661
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||| |||||||||||  |||||||||||||||||||| |||||||    
T  47653749 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaa-ctgaaaacttctgcagttaactgccgaggaaacctcaaacc 47653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 28456763 - 28456683
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaa 123  Q
    ||||||||||||| ||||||| |||||||| |||||| |  ||| ||||||||||||||||||| ||||||||||||||||    
T  28456763 ctgcagttaactatcgaggaaaacttcggcggtaaactactgaggaaaactgaaaacttcgacaattaactgccgaggaaa 28456683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 51461816 - 51461764
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaat 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51461816 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaat 51461764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 51290353 - 51290431
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaac 124  Q
    ||||||||||||||| || |||||| |||||||| | |||| |||||||||||||||| || |||||||||||||||||    
T  51290353 cagttaactaccgagaaaaacttcgacagtaaactaccgagtaaaactgaaaacttcggcaattaactgccgaggaaac 51290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 19914497 - 19914585
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| |||||||| |||||| | | || |||||| ||||||||| |||||||||||||||||||| |||||||    
T  19914497 ctgcagttaactgccgaggaaaacttcggccgtaaactacccaggaaaact-aaaacttcggcagttaactgccgaggaaacctcaaacc 19914585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 49875113 - 49875177
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaat--cattattttg 214  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||  ||||||||||    
T  49875113 acaaaaaccataaattgttattaataatatttattgattttgaatgtttcaattgcattattttg 49875177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 43012722 - 43012659
Alignment:
Q  67 ttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||||||| |||||| |||||||||||||||| |||| ||||||||||||||| |||||    
T  43012722 ttcggcagtaaactatcgaggaaaactgaaaacttcggcagtcaactgccgaggaaacctcaaa 43012659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 44726403 - 44726486
Alignment:
Q  49 ttaactaccg-aggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||||||||| ||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||| || || ||||||    
T  44726403 ttaactaccggaggaaaacttcggcagtaaactaccgagaaaaactaaaaacttcggcagttaactgccgatgacacctcaaac 44726486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 47652727 - 47652814
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| |||||||| ||||||||||| |||   |||| |||| ||||||||||| ||||||||||||||| |||| |||||||    
T  47652727 gcagttaactgccgaggaaaacttcggcagttaactcccgaggaaaattgaaaacttcggcagttaactgccgagaaaacctcaaacc 47652814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 586647 - 586560
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||   ||||||||| |||||||||||||||||||  |||||||    
T  586647 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaa--aaaaacttcggcagttaactgccgaggaaatctcaaacc 586560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 21700888 - 21700799
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| |||| |||||||||| | |||| |||||||||||||||  || ||||||| ||| ||||| |||||||    
T  21700888 ctgcagttaactgccgaggaaaactttggcagtaaactaccgaggaaaactgaaaacttctgcacttaactgtcgatgaaacctcaaacc 21700799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 30287768 - 30287817
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  30287768 cgaggaaaactgaaaacttcgacagttaactgccgaggaaacctcaaacc 30287817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 35719358 - 35719425
Alignment:
Q  171 attaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||| ||||||||||||||||| |  ||||||||| ||||||| |||| |||||||||||||||||||    
T  35719358 attattaatatttattgattttgatagtttcaatctttattttagtacatttcaaacaattgcagtat 35719425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 45780937 - 45780888
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  45780937 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 45780888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 49661761 - 49661712
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  49661761 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 49661712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 43011839 - 43011888
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| ||||||||||||||| |||| |||||||    
T  43011839 cgaggaaaactgaaaacttcggcagttaactgccgagaaaacctcaaacc 43011888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 46908421 - 46908482
Alignment:
Q  71 gcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||| ||| |||||| |||||||||||||||| ||||||||||| ||| |||| |||||||    
T  46908421 gcagttaactatcgaggaaaactgaaaacttcggcagttaactgctgagcaaacttcaaacc 46908482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 49502869 - 49502785
Alignment:
Q  38 actgactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaa 129  Q
    |||| ||||||||||||||||||||| ||||||||||| ||| | ||||       |||||||||  |||||||||||||||||||| ||||    
T  49502869 actggctgcagttaactaccgaggaaaacttcggcagttaactaccgag-------gaaaacttcagcagttaactgccgaggaaacctcaa 49502785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 49875037 - 49875090
Alignment:
Q  71 gcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaac 124  Q
    ||||| ||| |||||| |||||||||||||||| || |||||||||||||||||    
T  49875037 gcagttaactatcgaggaaaactgaaaacttcggcaattaactgccgaggaaac 49875090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 45943693 - 45943653
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  45943693 acaaaaaccttaaattgtcattattaatatttattgatttt 45943653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 51461881 - 51461833
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||| |||||||||||||||| |||||||||| ||||||||| ||||||    
T  51461881 cgaggaaaactgaaaacttcggcagttaactgacgaggaaacctcaaac 51461833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 50683271 - 50683318
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||| |||||||||||||||| ||||||||||||||| |||| |||||    
T  50683271 cgaggaaaactgaaaacttcggcagttaactgccgagaaaacctcaaa 50683318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 26606847 - 26606885
Alignment:
Q  94 gaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  26606847 gaaaacttcggcagttaactgccgaggaaacctcaaacc 26606885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 46341677 - 46341711
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagt 75  Q
    ||||||||||||||||||||||| |||||||||||    
T  46341677 gactgcagttaactaccgaggaaaacttcggcagt 46341711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 641094 - 641143
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| ||||||| || ||||||||| |||||||    
T  641094 cgaggaaaactgaaaacttcggcagttaattgtcgaggaaacctcaaacc 641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 7820177 - 7820214
Alignment:
Q  95 aaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  7820177 aaaacttcggcagttaactgccgaggaaacctcaaacc 7820214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 19915335 - 19915298
Alignment:
Q  95 aaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  19915335 aaaacttcggcagttaactgccgaggaaacctcaaacc 19915298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 26606824 - 26606861
Alignment:
Q  38 actgactgcagttaactaccgaggaagacttcggcagt 75  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  26606824 actgactacagttaactaccgaggaaaacttcggcagt 26606861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 45780279 - 45780316
Alignment:
Q  95 aaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  45780279 aaaacttcggcagttaactgccgaggaaacctcaaacc 45780316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 6328890 - 6328846
Alignment:
Q  88 aaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||| ||||| ||||||||||| ||||| |||||||    
T  6328890 aaaactgaaaactacgacaattaactgccgatgaaacctcaaacc 6328846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 41 - 238
Target Start/End: Original strand, 4014293 - 4014491
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc-annnnnn 139  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||| |||||||||||||||| ||||||||||||||||||||  |||||| |          
T  4014293 gactgcagttaactaccgaggaaaacttcggcagtaagctaccgaggaaaactgaaaacttcggcagttaactgccgaggaaaccacaaacctattattt 4014392  T
Q  140 nnnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
                ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4014393 tatttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 4014491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 4015148 - 4014958
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||||||||| || ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||              
T  4015148 ctgcagttaactaccgagaaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc----tgattt 4015053  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  4015052 ttttttttgacaaaaactataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 4014958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 41 - 235
Target Start/End: Original strand, 29905487 - 29905676
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnn 140  Q
    |||||||||||| |||||||||| ||||||| ||||||| | |||| |||||||||||||| | |||||||||||||||||||| |||||||            
T  29905487 gactgcagttaattaccgaggaaaacttcggtagtaaactaccgaggaaaactgaaaactttggcagttaactgccgaggaaacctcaaacc-----tgt 29905581  T
Q  141 nnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcag 235  Q
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  29905582 tttttttttttacaaaaaccataaattgtcattaataatatttattgattttaaatgtttcaatcattattttgatatgtttcaaacaattgcag 29905676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 28420087 - 28420001
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28420087 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 28420001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 6233620 - 6233425
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| ||||||||| ||||| | |||| |||||| ||||||||  |||||||||||||||||||| |||||||              
T  6233620 ctgcagttaactaccgaggaaaacttcggcaataaactaccgaggaaaactaaaaacttcagcagttaactgccgaggaaacctcaaacctttttttttt 6233521  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||    
T  6233520 ttctttttaacaaaaactataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggttcgtttaaaacaattggagtat 6233425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 43328970 - 43329163
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||| | |||||| ||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||| |||||||              
T  43328970 ctgcagttaactcctgaggaaaacttcggcagtaaattaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc-tgttttttt 43329068  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  43329069 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattct-gtacgtttcaaacaattgcagtat 43329163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 2528793 - 2528879
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2528793 acaaaaaccataagttgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 2528879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 10425025 - 10425111
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10425025 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 10425111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 234
Target Start/End: Complemental strand, 7780381 - 7780191
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnn 140  Q
    ||||||||||||||||||||||| |||||| |||||||| |  ||  |||||||||||||||| |||||||||||||||||||| |||||||            
T  7780381 gactgcagttaactaccgaggaaaacttcgacagtaaactacagaagaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc---tgttt 7780285  T
Q  141 nnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
               |||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  7780284 ttttttttttgacaaaaaccatacattatcattattaatatttattgattttgaatgtttcaatcattattttgatacgtttcaaacaattgca 7780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 29947950 - 29948036
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  29947950 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaataattgcagtat 29948036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 30802907 - 30802821
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  30802907 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaataattgcagtat 30802821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 37321303 - 37321389
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  37321303 acaaaaaccataaattgtcagtaataatatttattgattttgaatgtttcaatcattattttggtacgtttcgaacaattgcagtat 37321389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 39489357 - 39489443
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  39489357 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 39489443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 40157421 - 40157335
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  40157421 acaaaaaccataaattatcattaataatatttattgattttgaatgtttcaatcattatttttgtacgtttcaaacaattgcagtat 40157335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 33002262 - 33002177
Alignment:
Q  153 caaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  33002262 caaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtatgtttcaaactattgcagtat 33002177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 238
Target Start/End: Complemental strand, 2529454 - 2529259
Alignment:
Q  38 actgactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnn 137  Q
    ||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||| |||| |||||||         
T  2529454 actgactacagttaactatcgaggaaaacttcggcagtaaactatcgagaaaaactaaaaacttcggcagttaactaccgagcaaacctcaaacctattt 2529355  T
Q  138 nnnnnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagta 237  Q
                    ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||||||||| ||||||||||||    
T  2529354 tttttttttgtt----aaaaaccataaattgtcattaataatatttattgattttgaatatttcaattattatttt-gtacgtttcatacaattgcagta 2529260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 7779746 - 7779831
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  7779746 acaaaaaccataaattgtcattaataatatttgttgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 7779831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 39211528 - 39211442
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||||||    
T  39211528 acaaaaaccataaattgtcattaataatatttattgattttgaacgtttcaatcactattttggtacgtttccaacaattgcagtat 39211442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 40969578 - 40969497
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  40969578 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgca 40969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 9088743 - 9088926
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||| ||||||| ||  |||||||| |||||||              
T  9088743 ctgcagttaactaccgaggaaaatttcggcagtaaactaccgagaaaaactgaaaacttcggcagttaattgttgaggaaac-tcaaacc------tgat 9088835  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
             |||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  9088836 ttttttttgacaaaaactataaattgttattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgca 9088926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 238
Target Start/End: Complemental strand, 9089471 - 9089286
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnnn 146  Q
    |||||| || ||||||| ||||||||||||||| |||||| |||||||||||||||| ||||||| ||| |||||||| |||||||                  
T  9089471 agttaattatcgaggaaaacttcggcagtaaactatcgaggaaaactgaaaacttcggcagttaattgctgaggaaac-tcaaacc----ttattttttt 9089377  T
Q  147 nnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
         |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  9089376 ttttgacaaaaactataaattgtcattaataatatttattgattttgaatgttttaatcattatttt-gtacgtttcaaacaattgcagtat 9089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 33002090 - 33002178
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtataat 241  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  33002090 acaaaaaccataaattatcattaataatatttattgactttaaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtataat 33002178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 40156542 - 40156614
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttca 224  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40156542 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttca 40156614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 36510752 - 36510670
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  36510752 acaaaaaccataaattatctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgca 36510670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 38779589 - 38779503
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  38779589 acaaaaaccataaattatcattattaatatttattgattttgaatatttcaatcattattttggtacatttcaaacaattgcagtat 38779503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 39210992 - 39211077
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  39210992 acaaaaaccagaaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-atacgtttcaaacaattgcagtat 39211077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 39461982 - 39462068
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||    
T  39461982 acaaaaaccataaattgttattaataatatttattgattttgaatgtttaaatcattattttagtacgtttcaaacaattgtagtat 39462068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 39462486 - 39462401
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||    
T  39462486 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtatgtttcaatcaattgcagtat 39462401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 2270985 - 2271067
Alignment:
Q  155 aaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  2270985 aaaatcataaattgttattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 2271067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 15488106 - 15488027
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  15488106 acaaaaaccataaattatcattaataatatttattgattttgaatgtttcaattattattttgatacgtttcaaacaatt 15488027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 41272716 - 41272802
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| |||||||| |||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  41272716 acaaaaatcataaattatcattaataatattgattgattttgaatattttaatcattattttggtacgtttcaaacaattgcagtat 41272802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 41273181 - 41273095
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||  |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  41273181 acaaaaattataaattgccattaataatatttattgattttgaatgtttcaatcattattatggtacgtttcaaacaactgcagtat 41273095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 29600791 - 29600880
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||||||||| ||||||||||||||| | |||| |||||||||||||| | |||||||||||||||||||| |||||||    
T  29600791 ctgcagttaactaccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaactttggcagttaactgccgaggaaacctcaaacc 29600880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 39186164 - 39186243
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgattttt-aatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  39186164 acaaaaaccataaattgtgattaataatatttattgatttttgaatgtttcaatcattatttt-gtacgtttcaaacaatt 39186243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 43329347 - 43329259
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| ||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||| |||||||    
T  43329347 tgcagttaactatcgaggaaaacttcggcagtaaactatcgaggaaaactgaaaacttcggcagttaactgtcgaggaaacttcaaacc 43329259  T

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Target: chr2; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 39489212 - 39489295
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaac 124  Q
    ||||||||||||||  ||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  39489212 gactgcagttaactgtcgaggaaaacttcggcagtaaactaccgagaaaaactgaaaacttcggcagttaactgccgaggaaac 39489295  T

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Target: chr2; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 10424873 - 10424959
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  10424873 cagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 10424959  T

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Target: chr2; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 28420259 - 28420179
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaa 123  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||||||    
T  28420259 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctacagttaactgccgaggaaa 28420179  T

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Target: chr2; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 10425861 - 10425774
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||||||| |||||    
T  10425861 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagtcaactgccgaggaaacctcaaa 10425774  T

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Target: chr2; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 30802071 - 30802158
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||| |||||    
T  30802071 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaa 30802158  T

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Target: chr2; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 38340891 - 38340808
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaa 129  Q
    ||||||||||||||| || ||||||||||||||| | |||  ||||||||||||||||||||||||||||||||||||| ||||    
T  38340891 cagttaactaccgagaaaaacttcggcagtaaactaccgaagaaaactgaaaacttcgacagttaactgccgaggaaacctcaa 38340808  T

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Target: chr2; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 39186691 - 39186602
Alignment:
Q  152 acaaaaaccataaattgtcattaataat---atttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||| ||||||| |||||||||||   ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  39186691 acaaaaactataaattatcattaataattatatttattgattttgaatgtgtcaatcattattttggtacgtttcaaacaattgtagtat 39186602  T

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Target: chr2; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 12252150 - 12252240
Alignment:
Q  43 ctgcagttaactaccgaggaaga-cttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||||||||| | ||| |||||||||| |||||| ||| |||||||||||| |||||||||||||||||||| |||||||    
T  12252150 ctgcagttaactaccgaggaaaaactttggcagtaaactatcgaggaaatctgaaaacttcggcagttaactgccgaggaaacctcaaacc 12252240  T

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Target: chr2; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 28420197 - 28420111
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||| |||||||    
T  28420197 cagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaacc 28420111  T

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Target: chr2; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 30803060 - 30802971
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| |||||| |||||||| | |||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  30803060 ctgcagttaactgccgaggaaaacttcgacagtaaactaccgaggaaaactgaaaacttcggcagttaactgcagaggaaacctcaaacc 30802971  T

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Target: chr2; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 36510898 - 36510809
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||| ||||  | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  36510898 ctgcagttaactgccgaggaaaacttcggcaataaattaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 36510809  T

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Target: chr2; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 29948794 - 29948719
Alignment:
Q  56 ccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||| ||||||    
T  29948794 ccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaac 29948719  T

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Target: chr2; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 29947813 - 29947887
Alignment:
Q  58 gaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||| ||||||||||| ||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  29947813 gaggaaaacttcggcagttaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 29947887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 35935293 - 35935363
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgttt 222  Q
    |||||||  ||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  35935293 acaaaaattataaattgttattaataatatttattgattctgaatgtttgaatcattattttggtacgttt 35935363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 2528702 - 2528763
Alignment:
Q  71 gcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  2528702 gcagttaactatcgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 2528763  T

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Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 38779685 - 38779603
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||| ||||||||| | ||||       ||||||||||||||||||||||||||||||| |||||||    
T  38779685 ctgcagttaactcccgaggaaaacttctgcagtaaactaccgag-------gaaaacttcgacagttaactgccgaggaaacttcaaacc 38779603  T

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Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 16741318 - 16741364
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgt 198  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  16741318 acaaaaaccataaattgtcattattaatatttattgattttgaatgt 16741364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 37321220 - 37321286
Alignment:
Q  65 acttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    ||||||||||||||| | |||  |||||||||||||||| ||||||| |||||||||||| ||||||    
T  37321220 acttcggcagtaaactaccgaagaaaactgaaaacttcggcagttaattgccgaggaaacctcaaac 37321286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 43329243 - 43329188
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcatta 209  Q
    |||||||||||||||||||||||||  |||||||||||||| ||| ||||||||||||    
T  43329243 acaaaaaccataaattgtcattaat--tatttattgattttgaatatttcaatcatta 43329188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 12252260 - 12252296
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattga 188  Q
    |||||||||||||||||||||||||||||||||||||    
T  12252260 acaaaaaccataaattgtcattaataatatttattga 12252296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 33002337 - 33002289
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  33002337 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaac 33002289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 39490008 - 39489952
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaac 99  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||||||||||    
T  39490008 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaac 39489952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 36509965 - 36510028
Alignment:
Q  68 tcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgcc-gaggaaacatcaaa 130  Q
    |||||||||||| | |||| |||||||||||||||| |||||||||||| |||||||| |||||    
T  36509965 tcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccagaggaaacctcaaa 36510028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 39186077 - 39186144
Alignment:
Q  65 acttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||| | ||||||||||| ||||||||| ||||||| |||||| ||||| |||||||    
T  39186077 actttggcagtaaactaccgagaaaaactaaaaacttcggcagttaaatgccgaagaaacctcaaacc 39186144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 39033118 - 39033176
Alignment:
Q  65 acttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaa 123  Q
    ||||||||||||||  | |||  |||||||||||||||| |||||||||||||||||||    
T  39033118 acttcggcagtaaattaccgattaaaactgaaaacttcggcagttaactgccgaggaaa 39033176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 39211590 - 39211541
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||| ||||||||| |||||||    
T  39211590 cgaggaaaactgaaaacttcggcagttaactgtcgaggaaacctcaaacc 39211541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 39462586 - 39462501
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||| || ||||| |||| |||||||||| | |||| ||||||||||| ||   |||||||||||||||||||| ||| |||    
T  39462586 agttaactcccaaggaaaactttggcagtaaactaccgaggaaaactgaaaatttatgcagttaactgccgaggaaacctcatacc 39462501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 40156481 - 40156522
Alignment:
Q  91 actgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  40156481 actgaaaacttcggcagttaactgccgaggaaacctcaaacc 40156522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 40969685 - 40969596
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| ||  |||||| ||||||||  ||||| || ||  |||||||||||||||| |||||||||  ||||||||| |||||||    
T  40969685 ctgcagttaagtattgaggaaaacttcggccataaactatagaagaaaactgaaaacttcggcagttaactatcgaggaaacctcaaacc 40969596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 10472827 - 10472779
Alignment:
Q  169 tcattaataatatttattgatttttaatgtttcaatcattattttggta 217  Q
    |||||| || |||||||||||||| | ||||||||||||||||||||||    
T  10472827 tcattattagtatttattgattttgattgtttcaatcattattttggta 10472779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 71
Target Start/End: Complemental strand, 25515852 - 25515822
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcgg 71  Q
    |||||||||||||||||||||||||||||||    
T  25515852 gactgcagttaactaccgaggaagacttcgg 25515822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 39210926 - 39210968
Alignment:
Q  88 aaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||||||| ||||||||||||||| |||| |||||    
T  39210926 aaaactgaaaacttcggcagttaactgccgagtaaacctcaaa 39210968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 33002029 - 33002070
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaac 124  Q
    |||| ||||||||||| |||| ||||||||||||||||||||    
T  33002029 cgaggaaaactgaaaatttcggcagttaactgccgaggaaac 33002070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 33416963 - 33416927
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaac 79  Q
    ||||||||||||||||||||  |||||||||||||||    
T  33416963 ctgcagttaactaccgaggataacttcggcagtaaac 33416927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 40156448 - 40156476
Alignment:
Q  94 gaaaacttcgacagttaactgccgaggaa 122  Q
    |||||||||||||||||||||||||||||    
T  40156448 gaaaacttcgacagttaactgccgaggaa 40156476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 25994477 - 25994672
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||              
T  25994477 ctgcagttaactactgaggaaaacttcggcagtaaactaccgagaaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacctgtttatttt 25994576  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  25994577 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaataattattttgatacgtttaaaacaattgcagtat 25994672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 3695398 - 3695592
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| ||||||| ||||||| | | || |||||||||||||||| |||||||||||||||||||| |||||||              
T  3695398 ctgcagttaactaccgaggaaaacttcggtagtaaactaccaaggaaaactgaaaacttcggcagttaactgccgaggaaacttcaaacctgtttttttt 3695497  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  3695498 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 3695592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 238
Target Start/End: Complemental strand, 41859244 - 41859054
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnn 140  Q
    |||||||||||||||| ||| || ||||| | ||||||| |||||| ||||| |||||||||| |||||||||||||||||||| |||||||            
T  41859244 gactgcagttaactactgagaaaaacttcagaagtaaactatcgaggaaaacagaaaacttcggcagttaactgccgaggaaacctcaaacc-------t 41859152  T
Q  141 nnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  41859151 ttttttttttgacaaaaaccataaattgtcattaataatatttattgattttaaatgtttcaataattattttggtacgtttcaaacaattgcagtat 41859054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 30026196 - 30026110
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30026196 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 30026110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 34798770 - 34798684
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34798770 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 34798684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 36345034 - 36345226
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||||| |||||| ||||||||||||||| | |||| |||||||||||||||| ||||||| |||||||||||| |||||||              
T  36345034 ctgcagttaactactgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaattgccgaggaaacctcaaacc---tgttttt 36345130  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| |||| |||||||||||||||    
T  36345131 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtatcaatcattatttttgtatgtttaaaacaattgcagtat 36345226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 43519933 - 43520118
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||| ||||||| ||||||||||||||| | |||| ||||||||||| |||||||||||||||| |||||||| |||||||              
T  43519933 ctgcagttaactatcgaggaaaacttcggcagtaaactaccgaggaaaactgaaaatttcgacagttaactgcagaggaaacctcaaacc--------tg 43520024  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  43520025 tttttttttacaaaa-ccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 43520118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 2335029 - 2334943
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2335029 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 2334943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 44934045 - 44934131
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44934045 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 44934131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 45410015 - 45410101
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  45410015 acaaaaaccataaattgtcattaataatatttattgatattgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 45410101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 2712541 - 2712627
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2712541 acaaaaattataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 2712627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 27501782 - 27501868
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  27501782 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 27501868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 32584244 - 32584330
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  32584244 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 32584330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 38604133 - 38604047
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  38604133 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 38604047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 41858632 - 41858717
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  41858632 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 41858717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 45410884 - 45410798
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  45410884 acaaaaaccataaattgtcattaataatatttattgattttgaatatttcaatcattattttggtacgtttcaaacaattgctgtat 45410798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 38133201 - 38133395
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||||| |||||| |||| ||||||||||   |||| |||||||||||||||| ||||||||||| || ||||| |||||||              
T  38133201 ctgcagttaactactgaggaaaactttggcagtaaactcccgaggaaaactgaaaacttcggcagttaactgctgatgaaacctcaaacc-tgttttttt 38133299  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             |||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  38133300 tttttttggacaaaaaccatagattgtcattaataatatttattgattttgaatgtttcaataattattttggtatgtttcaaacaattgcagtat 38133395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 3696042 - 3695958
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagt 236  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3696042 acaaaaatcataaattgtcattaataacatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagt 3695958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 915560 - 915474
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  915560 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattggagtat 915474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 10749599 - 10749513
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  10749599 acaaaatccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttcggtacatttcaaacaattgcagtat 10749513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 28617746 - 28617832
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  28617746 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattggagtat 28617832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 31185370 - 31185284
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  31185370 acaaaatccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 31185284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 36314028 - 36314114
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  36314028 acaaaaaccataaattatcattattaatatttattgattttaaatgtttcaatcattattttggtacgtttcaaacaattgtagtat 36314114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 36314265 - 36314179
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  36314265 acaaaaaccataaattgtcattattaatatttattgattttgaatgtttcaataattattttggtacgtttcaaagaattgcagtat 36314179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 43363145 - 43363059
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  43363145 acaaaaaccataaattatctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 43363059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 45252533 - 45252447
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  45252533 acaaaaaccataaattgtcgttaataatatttattgattttgaatttttcaataattattttggtacgtttcaaacaattgcagtat 45252447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 23512702 - 23512618
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagt 236  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  23512702 acaaaaaccataatttgtcattattaatatttattgattttgaatgtttcaatcattattttggtacatttcaaacaattgcagt 23512618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 2713070 - 2712985
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  2713070 acaaaaaccataaattgtaattaataatatttattgattttgaatgtttccatcattatttt-gtacgtttcaaacaattgcagtat 2712985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 5532913 - 5532827
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  5532913 acaaaaaccattaattgtctttaataatatttattggttttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 5532827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 23512184 - 23512266
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  23512184 acaaaaaccataaattatcattattaatatttattgattttgaatgtttcaatcattattttagtacgtttcaaacaattgca 23512266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 25995075 - 25994990
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||    
T  25995075 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtatttttcaaacaattgcagtat 25994990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 43363302 - 43363213
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||| |||||||    
T  43363302 ctgcagttaactaccgaggaaaacttcggcagtaaactatcgaggaaaactgaaaactttggcagttaactgccgaggaaacctcaaacc 43363213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 21248309 - 21248391
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcag 235  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  21248309 acaaaaatcacaaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcag 21248391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 22960758 - 22960843
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| |||||    
T  22960758 acaaaaaccataaattgtcattgataatatttattgattttgaaagtttcaatcattatttt-gtacgtttcaaacaattgtagtat 22960843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 34503060 - 34502986
Alignment:
Q  164 aattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  34503060 aattctcattaataatatttattgattctgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 34502986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 31746031 - 31745942
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||||||||| ||||||||||||||| | | || |||||||||||||||| |||||||||||||||||||| |||||||    
T  31746031 ctgcagttaactaccgaggaaaacttcggcagtaaactaccaaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 31745942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 38604290 - 38604201
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  38604290 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 38604201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 27502610 - 27502523
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  27502610 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 27502523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 40745326 - 40745237
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||| ||||| ||||||| ||||||| | ||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  40745326 ctgcagttaactaccaaggaaaacttcggtagtaaactaccgagaaaaactaaaaacttcggcagttaactgccgaggaaacctcaaacc 40745237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 4528285 - 4528352
Alignment:
Q  171 attaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  4528285 attaataatatttattgattttgaatgtttcaattattattttggtacgtatcaaacaattgcagtat 4528352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 4529197 - 4529127
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttc 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  4529197 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaattattatttt-gtacgtttc 4529127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 43263219 - 43263133
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||  ||||||||| ||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||||||||    
T  43263219 acaaaaatcatattttgtcattattaatatttattgattttgattgtttcaatcattattttggtgtgtttcaaacaattgcagtat 43263133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 44886842 - 44886753
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||| |||| || ||||||||||||||| |  ||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  44886842 ctgcagttaactatcgagaaaaacttcggcagtaaactactgagaaaagctgaaaacttcggcagttaactgccgaggaaacctcaaacc 44886753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 27501631 - 27501719
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| ||| |||||| ||||||||| ||||||    
T  27501631 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagataactgtcgaggaaacctcaaac 27501719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 2335190 - 2335103
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||| ||||||| | |||| |||||||||||||||| ||||||||||| |||||||| |||||    
T  2335190 ctgcagttaactgccgaggaaaacttcggtagtaaactaccgaggaaaactgaaaacttcggcagttaactgcggaggaaacctcaaa 2335103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 4394964 - 4394882
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    |||||| ||||||||| ||| || ||||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  4394964 acaaaacccataaattatcaatattaatatttattaattttgaatatttcaatcattattttgatacgtttcaaacaattgca 4394882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 43362343 - 43362429
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||||| |||||||| ||||||||||||||| | | || |||||||||||||||| | |||||||||||||||||| |||||    
T  43362343 tgcagttaacttccgaggaaaacttcggcagtaaactaccaaggaaaactgaaaacttcggcggttaactgccgaggaaacctcaaa 43362429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 234
Target Start/End: Original strand, 30025046 - 30025230
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnnn 146  Q
    ||||||||||||||||| ||||||||||||||| | |||  |||||||||||||| | |||||||||| ||||||||| |||||||                  
T  30025046 agttaactaccgaggaaaacttcggcagtaaactaccgaagaaaactgaaaactttggcagttaactgtcgaggaaacctcaaacc-tgttttttttttt 30025144  T
Q  147 nnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
         | ||||| |||||||| |||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||| ||||    
T  30025145 ttttgataaaaatcataaattatcattaataatatt-attgattttgtatgtttcaatcattatttt-gtacgtttcaaacaactgca 30025230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 32584083 - 32584170
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||||||||||| |||||||| |||||||||||||||   |||| ||||||| |||||||| |||||||||||||||||||| ||||||    
T  32584083 ctgcagttaactgccgaggaaaacttcggcagtaaacttccgaggaaaactg-aaacttcggcagttaactgccgaggaaacctcaaac 32584170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 914748 - 914834
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||| ||||||| | |||| ||| |||||||||||| |||||||||||||||||||| |||||    
T  914748 ctgcagttaactgccgaggaaaacttcggtagtaaactaccgaggaaa-ctgaaaacttcggcagttaactgccgaggaaacctcaaa 914834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 5533067 - 5532981
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | ||||| |||   ||||||||| |||||||||||||||||||| |||||||    
T  5533067 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgagagaaa---aaaacttcggcagttaactgccgaggaaacctcaaacc 5532981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 31185518 - 31185431
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||| | |||||||| ||||||||||| ||| | |||| |||||||||||||||  |||||||||||||||||||| |||||||    
T  31185518 gcagttaattgccgaggaaaacttcggcagttaactaccgaggaaaactgaaaacttcagcagttaactgccgaggaaacctcaaacc 31185431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 38603339 - 38603428
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||||||||  ||||||| |||| |||||||||| | |||| |||||| ||||||||| ||||||||||||||| |||| |||||    
T  38603339 gactgcagttaactgtcgaggaaaactttggcagtaaactaccgaggaaaactaaaaacttcggcagttaactgccgagcaaacctcaaa 38603428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 42732822 - 42732733
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||| ||||||| |||| |||| ||||| | |||||||||||||||| |||||||| |||||||||| | ||| |||||||    
T  42732822 ctgcagttaactatcgaggaaaactttggcaataaactaccgagaaaaactgaaaatttcgacagctaactgccgatggaacctcaaacc 42732733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 44933890 - 44933979
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||| ||||||||| | |||| || |||||||| |||| |||||||||| ||||||||| |||||||    
T  44933890 ctgcagttaactgccgaggaaaacttccgcagtaaactaccgaggaatactgaaaaattcggcagttaactgtcgaggaaacctcaaacc 44933979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 28618481 - 28618395
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||| | |||||||| ||||||| ||||||| | |||| ||| |||||||||||| |||||||||||||||||||| |||||    
T  28618481 ctgcagttaaatgccgaggaaaacttcggtagtaaactaccgaggaaa-ctgaaaacttcggcagttaactgccgaggaaacctcaaa 28618395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 2712433 - 2712519
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaa 129  Q
    ||||||||||||||||||||| | ||||||||| |||   |||| ||||||| ||| |||| |||||||||||||||||||| ||||    
T  2712433 ctgcagttaactaccgaggaaaatttcggcagttaactgccgaggaaaactggaaatttcggcagttaactgccgaggaaacctcaa 2712519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 44841915 - 44841829
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||||| ||||| || |||||| |||||||| | |||||||||   |||||||||||| ||||||||||||||||| |||||    
T  44841915 tgcagttaactgccgagaaaaacttcgtcagtaaactaccgagaaaaaaaaaaaacttcgacatttaactgccgaggaaacctcaaa 44841829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 45252641 - 45252554
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||  || ||||||||||||||  |||||| ||||||| |||||||| |||||||||||||||| ||| |||||||    
T  45252641 tgcagttaactatcgaaaaaaacttcggcagtaaattatcgaggaaaactg-aaacttcggcagttaactgccgaggtaacctcaaacc 45252554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 28617599 - 28617686
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| |||||| |||||||| | |||| ||||   ||||||||| |||||||||||||||||||  |||||||    
T  28617599 ctgcagttaactgccgaggaaaacttcgacagtaaactaccgaggaaaaa--aaaacttcggcagttaactgccgaggaaatctcaaacc 28617686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 21248203 - 21248292
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| || ||||||| ||||||||||||||| |  ||  ||||||||||||| |  ||||||| |||||||||||| |||||||    
T  21248203 ctgcagttaattatcgaggaaaacttcggcagtaaactactgatgaaaactgaaaactacagcagttaaatgccgaggaaacctcaaacc 21248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 41858567 - 41858616
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  41858567 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 41858616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 915707 - 915624
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||  ||||||| ||||||||||||||| | |||| ||||   ||||||||| |||||||||||||||||||  |||||||    
T  915707 cagttaactgtcgaggaaaacttcggcagtaaactaccgaggaaaa---aaaacttcggcagttaactgccgaggaaatctcaaacc 915624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 32585021 - 32584974
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  32585021 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 32584974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 30026262 - 30026213
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| ||||||||||||||||  ||||||||||||||||||| |||||||    
T  30026262 cgaggaaaactgaaaacttcggtagttaactgccgaggaaacctcaaacc 30026213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 35645950 - 35646029
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaa---aactgaaaacttcgacagttaactgccgagg 120  Q
    |||||||||||||||||||| |||||| || ||||| | |||| ||    ||||||||||||| ||||||||||||||||    
T  35645950 tgcagttaactaccgaggaaaacttcgtcactaaactaccgaggaatactactgaaaacttcggcagttaactgccgagg 35646029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 34798839 - 34798790
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||  |||||||||| ||||||||| |||||||    
T  34798839 cgaggaaaactgaaaacttcagcagttaactgtcgaggaaacttcaaacc 34798790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 122
Target Start/End: Original strand, 39207684 - 39207713
Alignment:
Q  93 tgaaaacttcgacagttaactgccgaggaa 122  Q
    ||||||||||||||||||||||||||||||    
T  39207684 tgaaaacttcgacagttaactgccgaggaa 39207713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 44841808 - 44841768
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    |||||| |||||||||||  |||||||||||||||||||||    
T  44841808 acaaaatccataaattgtatttaataatatttattgatttt 44841768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 45409953 - 45409985
Alignment:
Q  91 actgaaaacttcgacagttaactgccgaggaaa 123  Q
    ||||||||||||| |||||||||||||||||||    
T  45409953 actgaaaacttcggcagttaactgccgaggaaa 45409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 6e-46; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 29097902 - 29097714
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| | ||||||||||| | | |||| |||||||||||||||| |||||||||||||||||||| |||||||              
T  29097902 ctgcagttaactaccgaggaaaaattcggcagtaatctaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc-------tgt 29097810  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29097809 ttttttctgacaaaaaccataaattgtcattaataatatttatttattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 29097714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 47750555 - 47750746
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||| ||||||||||  |||||||||||||||||||| |||||||              
T  47750555 ctgcagttaactcccgaggaaaacttcggcagtaaaccaccgaggaaaaatgaaaacttcagcagttaactgccgaggaaacctcaaacc----tgtttt 47750650  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  47750651 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtatgtttaaaacaattgcagtat 47750746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 238
Target Start/End: Complemental strand, 30471585 - 30471393
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnn 143  Q
    |||||||||||| ||||||| ||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||| |||||||               
T  30471585 tgcagttaactatcgaggaaaacttcggcagtaaattaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc-tgtttttttt 30471487  T
Q  144 nnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
            |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  30471486 ttttttttacaaaa-ccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgtagtat 30471393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 234
Target Start/End: Original strand, 32606801 - 32606991
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnn 144  Q
    |||||||||| |||||||| ||||| |||||||||  ||||| |||||||||||||||| |||||||||||||||||||| |||||||                
T  32606801 gcagttaactcccgaggaaaacttctgcagtaaactgtcgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacctgtttttttttt 32606900  T
Q  145 nnnnnnna-caaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
           | |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  32606901 tttttttaacaaaaaccataaattgtcattaataatatttattgattttgaatgtttaaatcattattttggtacgtttcaaacaattgca 32606991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 26833516 - 26833322
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||| ||| |||| |||||||||| | |||| ||||||||||||||||  ||||||||| ||||||||| |||||||              
T  26833516 ctgcagttaactaccgaagaaaactttggcagtaaactaccgaggaaaactgaaaacttcggtagttaactgtcgaggaaacctcaaacc-tgtgttttt 26833418  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  26833417 tttttgttgacaaaaactataaattgtcattaataatatttattgattttgaatgtttcaatcattattttgatacgtttcaaacaattgcagtat 26833322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 29113154 - 29112963
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| | ||||||||||| | | |||| ||||||||||| |||| |||||||||||||||||||| |||||||              
T  29113154 ctgcagttaactaccgaggaaaaattcggcagtaatctaccgaggaaaactgaaaatttcggcagttaactgccgaggaaacctcaaacc----tgtttt 29113059  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||| |||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  29113058 ttttttttgacaaaaatcataaattgtcattaataatatttattgtttttgaatgtttcaataattattttggtacgtttcaaacaattgcagtat 29112963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 5026673 - 5026759
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  5026673 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcgttattttggtacgtttcaaacaattgcagtat 5026759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 28564509 - 28564423
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28564509 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 28564423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 31512437 - 31512523
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31512437 acaaaaactataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 31512523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 35839508 - 35839594
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35839508 acaaaaaccataaaatgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 35839594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 48000330 - 48000416
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  48000330 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgttccaaacaattgcagtat 48000416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 226
Target Start/End: Original strand, 30468481 - 30468659
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||| ||| ||| ||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||| |||||||              
T  30468481 ctgcagttaactatcgaagaaaacttcggcagtaaactaccgagaaaaactgaaaacttaggcagttaactgccgaggaaacctcaaacc----tgtttt 30468576  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaa 226  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  30468577 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaa 30468659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 25195377 - 25195463
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25195377 acaaaaatcataaatggtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 25195463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 27657163 - 27657249
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  27657163 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttagtacgtttcaaacaattgcagtat 27657249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 42582953 - 42582867
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  42582953 acaaaaaccataaattgtctttaataatatttattgattttaaatgtttcaatcattattttggtacgttttaaacaattgcagtat 42582867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 38266050 - 38265964
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  38266050 acaaaaaccataaattatcattattaatatttattgattttaaatttttcaatcattattttggtacgtttcaaacaattgcagtat 38265964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 46908384 - 46908298
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  46908384 acaaaaaccataaattgtctttaataatatttattggttttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 46908298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 48900995 - 48901081
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  48900995 acaaaaaccataaattgtcgttaataatatttattgattttgaatttttcaatcattattttgatacgtttcaaacaattgcagtat 48901081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 7953707 - 7953624
Alignment:
Q  155 aaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  7953707 aaaaccataaattgtcattattaatatttattaattttgaatgtttcaatcattattttggtatgtttcaaacaattgcagtat 7953624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 38265548 - 38265631
Alignment:
Q  155 aaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  38265548 aaaaccataaattgtcattattaatatttattgattttgaatgtttcaatcattatttttttacgtttcaaacaattgcagtat 38265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 29112477 - 29112562
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  29112477 acaaaaaccataaattgttattaataatatttattgattttgaatgtttcaataattatttt-gtacgtttcaaacaattgcagtat 29112562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 35840165 - 35839974
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||| | |||||||| ||||||||||||||| | ||||||||| ||||||||||| ||||||||||| || ||||| ||||||               
T  35840165 ctgcagttaatttccgaggaaaacttcggcagtaaactaccgagaaaaattgaaaacttcggcagttaactgctgacgaaacctcaaac---atattttt 35840069  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||||| |||||    
T  35840068 tttttgttaacaaaaaccataaattgtcattaataatatttattgattttgaacgtttcaattattatttt-gtacgtttcaaacaattgtagtat 35839974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 42795040 - 42794954
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  42795040 acaaaaaccataaattatctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgtagtat 42794954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 49140846 - 49140932
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  49140846 acaaaaaccatatattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaataattgcagtat 49140932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 12027480 - 12027552
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttca 224  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12027480 acaaaaaccataaattgtcgttaataatatttattgattttgaatgtttcaatcattattttggtacgtttca 12027552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 34508702 - 34508785
Alignment:
Q  154 aaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||    
T  34508702 aaaaaccatatattgtcattaataatatttattgattttgaatgtttcaatctttatttt-gtacgtttcaaacaattgcagtat 34508785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 49141663 - 49141576
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| |||||    
T  49141663 ctgcagttaactgccgaggaaaacttcggcagtaaactatcgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 49141576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 12080599 - 12080680
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||||||    
T  12080599 acaaaaaccataaattgtcattaataatatttattgatttagaatgtttcaatcattatttt-gtacgtttgaaacaattgca 12080680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 19073517 - 19073432
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  19073517 acaaaaaccataaattatcattaataatatctattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgtagtat 19073432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 38083979 - 38084060
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  38083979 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatca-taatttggtacgtttcaaacaattgca 38084060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 42583102 - 42583013
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  42583102 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 42583013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 49140684 - 49140773
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  49140684 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 49140773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 46907567 - 46907654
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  46907567 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 46907654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 8089 - 8000
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  8089 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgctgaggaaacctcaaacc 8000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 12210630 - 12210545
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  12210630 gcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 12210545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 7100 - 7187
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||| |||||    
T  7100 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaa 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 42794224 - 42794311
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| |||||||||||||||   |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  42794224 ctgcagttaactgccgaggaaaacttcggcagtaaactcccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 42794311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 42582146 - 42582223
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaa 123  Q
    ||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||    
T  42582146 cagttaactgccgaggaaaacttcggcagtaaactatcgaggaaaactgaaaacttcggcagttaactgccgaagaaa 42582223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 27658019 - 27657942
Alignment:
Q  55 accgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||| |||||||    
T  27658019 accgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaacc 27657942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 28563692 - 28563776
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||| |||||||| ||||||||||||||| |  ||| |||||||||||||||  |||||||||||||||||||| |||||    
T  28563692 cagttaactgccgaggaaaacttcggcagtaaactactgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaa 28563776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 45791336 - 45791423
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||||||||||||||| ||||||| ||||||| | |||| |||| ||||||||||| |||||||||| ||| ||||| |||||    
T  45791336 ctgcagttaactaccgaggaaaacttcggtagtaaactaccgaggaaaagtgaaaacttcggcagttaactgtcgatgaaacctcaaa 45791423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 12080487 - 12080568
Alignment:
Q  51 aactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||| |||||| ||||||||||||||| |  ||| |||||||||||||||| ||||||| |||||||||||| |||||||    
T  12080487 aactactgaggaaaacttcggcagtaaactactgaggaaaactgaaaacttcggcagttaattgccgaggaaacctcaaacc 12080568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 25195304 - 25195365
Alignment:
Q  71 gcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  25195304 gcagttaactatcgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 25195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 48900902 - 48900975
Alignment:
Q  57 cgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||| ||||| ||| | ||| | ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  48900902 cgaggaaaacttcagcaatgaactaccgagaaaaactgaaaactttgacagttaactgccgaggaaacctcaaa 48900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 5026606 - 5026655
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  5026606 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 5026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 26832849 - 26832898
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  26832849 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 26832898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 38266148 - 38266064
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||       |||||| |||||| |||||||||| |||||| |||||||    
T  38266148 gactgcagttaactaccaaggaaaacttcggcagtaaactatcgag-------gaaaacctcgacatttaactgccgcggaaacttcaaacc 38266064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 46908501 - 46908452
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  46908501 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 46908452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 26832920 - 26832968
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgttt 200  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  26832920 acaaaaaccataaattatcattaataatatttattgtttttgaatgttt 26832968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 38084787 - 38084715
Alignment:
Q  58 gaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||| ||||||||| ||||| | |||| |||||||||||||||  |||||||||| ||||||||| |||||    
T  38084787 gaggaaaacttcggcattaaactaccgaggaaaactgaaaacttctgcagttaactgtcgaggaaacctcaaa 38084715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 48901437 - 48901390
Alignment:
Q  177 aatatttattgatttttaatgtttcaatcattattttggtacgtttcaa 225  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  48901437 aatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaa 48901390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 25195897 - 25195846
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaa 203  Q
    |||||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  25195897 acaaaaactataaattgtcattaataatatttacttattttgaatgtttcaa 25195846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 48000247 - 48000306
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaact 100  Q
    ||||||||||||||  |||||| |||||||||||||||| | |||| |||||||||||||    
T  48000247 gactgcagttaactgtcgaggaggacttcggcagtaaactaccgaggaaaactgaaaact 48000306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 19073612 - 19073530
Alignment:
Q  50 taactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||| ||||| || ||| ||||||||||  | |||  |||||||||||||||| |||||||||| ||||||||| |||||||    
T  19073612 taacttccgagaaaaactacggcagtaaattaccgacgaaaactgaaaacttcggcagttaactgacgaggaaacctcaaacc 19073530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 38083840 - 38083906
Alignment:
Q  58 gaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaac 124  Q
    |||||| ||||||||||||||| |  ||  ||||||||||| |||| ||||||||||||||||||||    
T  38083840 gaggaaaacttcggcagtaaactacggaagaaaactgaaaatttcggcagttaactgccgaggaaac 38083906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 7953804 - 7953720
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||||| | |||||| ||||||||| ||||| | ||||       |||||||||| |||||||||||||||||||| |||||||    
T  7953804 gactgcagttaactgctgaggaaaacttcggcaataaactaccgag-------gaaaacttcggcagttaactgccgaggaaacttcaaacc 7953720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 48901484 - 48901448
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaac 79  Q
    ||||||||||||||||||||| |||||||||||||||    
T  48901484 ctgcagttaactaccgaggaaaacttcggcagtaaac 48901448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 12027423 - 12027462
Alignment:
Q  93 tgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  12027423 tgaaaacttcggcagttaactgccgaggaaacctcaaacc 12027462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 12080449 - 12080487
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaa 81  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  12080449 ctgcagttaactatcgaggaaaacttcggcagtaaacaa 12080487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 12081219 - 12081175
Alignment:
Q  88 aaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||||||| |||||||||||| | ||||| |||||||    
T  12081219 aaaactgaaaacttcggcagttaactgccaaagaaacctcaaacc 12081175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 31512379 - 31512423
Alignment:
Q  88 aaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||||||  |||||||||| ||||||||| |||||||    
T  31512379 aaaactgaaaacttctgcagttaactgtcgaggaaacctcaaacc 31512423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 42024397 - 42024437
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    ||||||| | ||||||||||||| |||||||||||||||||    
T  42024397 acaaaaatcttaaattgtcattattaatatttattgatttt 42024437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 42025053 - 42025013
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  42025053 acaaaaaccttaaattatcattattaatatttattgatttt 42025013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 43 - 234
Target Start/End: Complemental strand, 1736133 - 1735946
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||              
T  1736133 ctgcagttaactaccgaggaaaacttcggcagtaaactaccgagtaaaactgaaaacttcgacagttaactgccgaggaaacctcaaacc---tattttt 1736037  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
             ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  1736036 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatatttcaatcattatttt-gtacgtttcaaacaattgca 1735946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 234
Target Start/End: Original strand, 32537544 - 32537729
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnn 143  Q
    |||||||||||| ||||||| ||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||||| |||||||               
T  32537544 tgcagttaactatcgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcgatagttaactgccgaggaaacctcaaacc-----ttgttt 32537638  T
Q  144 nnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  32537639 tttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaaaaattgca 32537729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 44 - 238
Target Start/End: Original strand, 9655223 - 9655415
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnn 143  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||              
T  9655223 tgcagttaactaccgagaaaaacttcggcagtaaactatcgagaaaaactgaaaacttcggcagttaactaccgaggaaacctcaaatcagttttttttt 9655322  T
Q  144 nnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
            |||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  9655323 tttttg--acaaaaaccataaattggtattaataatatttattgattttgaatgtttcaatcattattttggtacgattcaaacaattgcagtat 9655415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 37295263 - 37295456
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnn 144  Q
    |||||||||| | || ||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||                
T  37295263 gcagttaactgcagaagaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacctgtttttttttt 37295362  T
Q  145 nnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
           |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  37295363 ttttttgacaaaaaccataaattttcattaataatatttattgattttgaatgtttcaatcattattttggaacgtttcaaacaattgcagtat 37295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 41 - 238
Target Start/End: Complemental strand, 9655953 - 9655759
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnn 140  Q
    ||||||||||||||||||||||| |||||||||||||||   |||| |||||||||||||||| |||||||||| |||| |||| |||||||            
T  9655953 gactgcagttaactaccgaggaaaacttcggcagtaaactgccgaggaaaactgaaaacttcggcagttaactgtcgagaaaacctcaaacc--tgtttt 9655856  T
Q  141 nnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
               |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  9655855 tttttttgttgacaaaaaccataaactgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 9655759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 46 - 238
Target Start/End: Complemental strand, 21343416 - 21343223
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnn 145  Q
    |||||||||||||||||| ||||||| ||||||| | | || ||||||||||||||| ||| ||||||||||||||||| |||||||                 
T  21343416 cagttaactaccgaggaaaacttcggtagtaaactaccaaggaaaactgaaaacttcaacaattaactgccgaggaaacctcaaacctgttttttttttt 21343317  T
Q  146 nnnnnn-acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
           | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21343316 tttttttataaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 21343223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 28234582 - 28234668
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28234582 acaaaaaccataaattgtcattaataatatttattgattttaaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 28234668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 16473615 - 16473531
Alignment:
Q  154 aaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16473615 aaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 16473531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 11566762 - 11566676
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11566762 acaaaaatcataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 11566676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 28320640 - 28320726
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  28320640 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttccatcattattttggtacgtttcaaacaattgcagtat 28320726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 40240415 - 40240220
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||||| |||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||              
T  40240415 ctgcagttaactactgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcgccagttaactgccgaggaaacctcaaacctgtttttttt 40240316  T
Q  143 nnnnnnnnn-acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
              ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||    
T  40240315 ttttttgttgacaaaaaccataaattgtcgttaataatatttattgattttgaatgtttcaatcattatttt-gtatgtttcaatcaattgcagtat 40240220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 238
Target Start/End: Original strand, 1735403 - 1735593
Alignment:
Q  46 cagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnn 145  Q
    |||||||||||||||||| |||||||| ||| || | | || |||||||||||||||| |||||||||||||||||||| |||||||                 
T  1735403 cagttaactaccgaggaaaacttcggctgtacactaccaaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc---tttttttttt 1735499  T
Q  146 nnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatca-ttattttggtacgtttcaaacaattgcagtat 238  Q
          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||    
T  1735500 tttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattttttttggtacgtttcaaacaattgtagtat 1735593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 28157615 - 28157803
Alignment:
Q  49 ttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnnnnn 148  Q
    ||||||||||||||| ||||||||||||||| | |||| |||||| ||||||||  || ||||||||||||||||| |||||||                    
T  28157615 ttaactaccgaggaaaacttcggcagtaaactaccgaggaaaactaaaaacttcagcaattaactgccgaggaaacctcaaacctgttttttcttttttt 28157714  T
Q  149 nnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
       | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  28157715 cagagaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaattattatttt-gtacgtttcaaacaattgcagtat 28157803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 28235473 - 28235394
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28235473 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaatt 28235394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 14200748 - 14200834
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  14200748 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 14200834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 16472666 - 16472752
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16472666 acaaaaaccataaatttttattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 16472752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 21342834 - 21342919
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  21342834 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 21342919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 36479929 - 36480015
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  36479929 acaaaaaccataacttgtcattaataatatttattgattttgaatgtttcaatcattatttttgtacgtttcaaacaattgcagtat 36480015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 40833494 - 40833408
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  40833494 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 40833408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 50447190 - 50447276
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  50447190 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttgatacgtttcaaacaattgcagtat 50447276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 51037343 - 51037257
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  51037343 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattacagtat 51037257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 56566592 - 56566506
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  56566592 acaaaaatcataaattgtaattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 56566506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 28322162 - 28321968
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||| ||| |||||||||||| || | |||| |||||| ||| ||||| |||||||||| |||| |||| |||||||              
T  28322162 ctgcagttaactaccgaagaaaacttcggcagtatactaccgaggaaaactaaaatcttcggcagttaactgtcgagaaaacctcaaacctgtgtttttt 28322063  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  28322062 tttttttttacaaaaaccataaatcgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 28321968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 29307393 - 29307307
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  29307393 acaaaaaccataaattatctttaataatatttattgattttgaatgtttcaatcattattttggtaagtttcaaacaattgcagtat 29307307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 38369077 - 38368991
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  38369077 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattggagtat 38368991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 46254337 - 46254251
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  46254337 acaaaaaccataaattgtctttaattatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 46254251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 46561915 - 46561829
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  46561915 acaaaaaccataaattgtcattattaatatttattgattttaaatgtttcaatcattattttggtatgttacaaacaattgcagtat 46561829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 55587538 - 55587624
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  55587538 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattggagtat 55587624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 56565921 - 56566006
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  56565921 acaaaaaccataaattgtc-ttaataatatttattgattttaaatgtttcaattattattttggtacgtttcaaacaattgcagtat 56566006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 36480582 - 36480385
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc--annnnnnn 140  Q
    ||||||||||||||||||||| ||||||| ||| ||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||              
T  36480582 ctgcagttaactaccgaggaaaacttcggtagttaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacctgtttttttt 36480483  T
Q  141 nnnnnnnnnnnacaaa-aaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
               ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  36480482 ttttttttttgacaaaaaaccgtaaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtatgtttcaaacaattgcagtat 36480385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 234
Target Start/End: Complemental strand, 46169243 - 46169057
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||| ||||||||||| ||||||||||||||||| || |||||||              
T  46169243 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaattgaaaacttcggcagttaactgccgaggacacctcaaacc----tggttt 46169148  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
             ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||| ||||||||||||||||    
T  46169147 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatatttcaattattatttt-gtaagtttcaaacaattgca 46169057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 40963652 - 40963567
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  40963652 acaaaaaccataaattatcattaataatatttattgattttgaatgtttcaatgattatttt-gtacgtttcaaacaattgcagtat 40963567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 35631194 - 35631387
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||| |||||||| |||||| |||||||| |||||| |||| | ||||||||| |||| ||||||||||||||| |||||||              
T  35631194 ctgcagttaactgccgaggaaaacttcgacagtaaactatcgaggaaaattaaaaacttcggcagt-aactgccgaggaaacctcaaacc-tattttttt 35631291  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             | |||||||||||||| |||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||||    
T  35631292 tttttgttgataaaaaccataaattatcattaataatatttattgattttcaatgtttcaatcaatactttagtacgtttcaaacaattgcagtat 35631387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 7485550 - 7485467
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcag 235  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  7485550 acaaaaaccataagttgtctttaataatatttattgattttgaatgtttcaatcattattttggtacattttaaacaattgcag 7485467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 42528976 - 42529054
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  42528976 acaaaaaccataaattgtcattaataatattgattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaatt 42529054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 7087988 - 7088073
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| | |||| |||||||||||||||||||    
T  7087988 acaaaaaccataaattatcattaataatatttattgattttaaatgtttcaatcattattct-gtacatttcaaacaattgcagtat 7088073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 45971730 - 45971644
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  45971730 acaaaaatcataaattatcattattaatatttattgattttgaatgtttcaatcattattttgatacgtttcaaacaattggagtat 45971644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 46561406 - 46561492
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  46561406 acaaaaaccataaattgtcgttactaatatttaatgattttgaatgtttcaatcattattttggtacgttttaaacaattgtagtat 46561492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 40240752 - 40240663
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||||| |||||| |||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  40240752 ctgcagttaactactgaggaaaacttcgacagtaaactaccgagaaaaactgaaaacttcgtcagttaactgccgaggaaacctcaaacc 40240663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 46254490 - 46254401
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  46254490 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 46254401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 14201572 - 14201485
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  14201572 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 14201485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 29307535 - 29307448
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  29307535 gcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 29307448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 33812818 - 33812746
Alignment:
Q  155 aaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaaca 228  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  33812818 aaaaccataaattttcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaaca 33812746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 55704701 - 55704624
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaa 229  Q
    ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  55704701 acaaaaatcataaattgtcattattaatatttattgattttgaatgtttcaataattattttggtaggtttcaaacaa 55704624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 40833652 - 40833564
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| ||| |||||||||||||||| ||||||    
T  40833652 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagataactgccgaggaaacctcaaac 40833564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 40832674 - 40832761
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| | |||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  40832674 ctgcagttaactgctgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 40832761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 14200592 - 14200680
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||||| |||||||| |||||||||||||||||||| |||||||    
T  14200592 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactg-aaacttcggcagttaactgccgaggaaacctcaaacc 14200680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 51037510 - 51037421
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||| |||||| |||||||| ||||||||||||||| | |||  |||||||||||||||| |||||||||||||||||||| |||||||    
T  51037510 ctgcaattaactgccgaggaaaacttcggcagtaaactaccgatgaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 51037421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 40239785 - 40239849
Alignment:
Q  174 aataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  40239785 aataatatttattgattttgaatgtttcgatcattattttggtacgttttaaacaattgcagtat 40239849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 38368259 - 38368345
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||| ||||||| | |||||||| |||||||||||| |||||||||||||||||||| |||||    
T  38368259 ctgcagttaactgccgaggaaaacttcggtagtaaactaccgagaaaa-ctgaaaacttcggcagttaactgccgaggaaacctcaaa 38368345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 50447039 - 50447127
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactg-aaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||||||  ||||||| ||||||||||||||| | |||| ||||||| ||||||||| |||||||||||||||||||| |||||    
T  50447039 ctgcagttaactgtcgaggaaaacttcggcagtaaactaccgaggaaaactgaaaaacttcggcagttaactgccgaggaaacctcaaa 50447127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 23221712 - 23221626
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||| ||||||| | |||| ||| |||||||||||| |||||||||||||||||||| |||||    
T  23221712 ctgcagttaactgccgaggaaaacttcggtagtaaactaccgaggaaa-ctgaaaacttcggcagttaactgccgaggaaacctcaaa 23221626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 12376016 - 12376076
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcg 103  Q
    ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||||||||||    
T  12376016 ctgcagttaactaccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcg 12376076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 21342748 - 21342812
Alignment:
Q  68 tcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  21342748 tcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 21342812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 55587386 - 55587465
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaa 123  Q
    |||||||||||| |||||||| ||||||| ||||||| | ||| | ||||||||||||||| |||||||||||||||||||    
T  55587386 ctgcagttaactgccgaggaaaacttcggtagtaaactaccga-agaaactgaaaacttcggcagttaactgccgaggaaa 55587465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 46165859 - 46165910
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaa 203  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  46165859 acaaaaaccattaattgtcattaataatatttattgattttgaatgtttcaa 46165910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 12376106 - 12376164
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattat 210  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  12376106 acaaaaatcataaattgttattaataatatttattgattttgaatgtttgaatcattat 12376164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 29306560 - 29306645
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||| |||||||| | ||||||||||||| | |||| |||| |||||||||   |||||||||||||||||||| |||||    
T  29306560 gcagttaactgccgaggaaaatttcggcagtaaactaccgaggaaaattgaaaacttttgcagttaactgccgaggaaacctcaaa 29306645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 7484764 - 7484844
Alignment:
Q  50 taactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||| ||||| || |||| || ||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  7484764 taactgccgagaaaaactttggtagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 7484844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 7485703 - 7485616
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcga-gaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||| |||||| |||||||||||||||||||||||| | ||| |||||||   ||| |||| |||||||||||||||||||| |||||||    
T  7485703 ctgcaattaactgccgaggaagacttcggcagtaaactaccgaggaaaaac---aaaattcggcagttaactgccgaggaaacctcaaacc 7485616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 46253514 - 46253581
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagtta 110  Q
    |||||||||||| |||||||| ||||||||||| ||| | |||| |||||||||||||||| ||||||    
T  46253514 ctgcagttaactgccgaggaaaacttcggcagtgaactaccgaggaaaactgaaaacttcggcagtta 46253581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 23220709 - 23220796
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||| ||| ||||||||||||||| | |||| ||||   ||||||||| |||||||||||||||||||  |||||||    
T  23220709 ctgcagttaactgccgatgaaaacttcggcagtaaactaccgaggaaaaa--aaaacttcggcagttaactgccgaggaaatctcaaacc 23220796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 38369224 - 38369137
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| |||||| |||||||| | |||| ||||   ||||||||| |||||||||||||||||||  |||||||    
T  38369224 ctgcagttaactgccgaggaaaacttcgacagtaaactaccgaggaaaaa--aaaacttcggcagttaactgccgaggaaatctcaaacc 38369137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 40240641 - 40240595
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgt 198  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  40240641 acaaaaaccataaattgtcgttaataatatttattgattttgaatgt 40240595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 7087911 - 7087972
Alignment:
Q  71 gcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||| ||||||||| |||||||    
T  7087911 gcagttaactatcgaggaaaactgaaaacttcggcagttaactgtcgaggaaacctcaaacc 7087972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 40963717 - 40963668
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  40963717 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 40963668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 53536022 - 53536083
Alignment:
Q  71 gcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||| ||||||||| |||||||    
T  53536022 gcagttaactatcgaggaaaactgaaaacttcggcagttaactgtcgaggaaacctcaaacc 53536083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 16473720 - 16473638
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact---gaaaacttcgacagttaactgccgaggaaac 124  Q
    ||||||||||||||||||| ||||| ||||||||| |  ||| || |||   |||||||||| ||||||||||||||||||||    
T  16473720 gcagttaactaccgaggaaaacttctgcagtaaactactgaggaatactactgaaaacttcggcagttaactgccgaggaaac 16473638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 28320575 - 28320619
Alignment:
Q  88 aaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||||||| |||||||||||||||||||| |||||||    
T  28320575 aaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 28320619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 55704263 - 55704331
Alignment:
Q  161 ataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    ||||||| |||||| ||||||||||||||||| ||||||| ||||||||  ||| ||| ||||||||||||    
T  55704263 ataaattttcattattaatatttattgattttgaatgttttaatcatta--ttgttacatttcaaacaatt 55704331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 28234477 - 28234565
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact---gaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||| ||||| || ||||| ||||||||| | |||| || |||   |||||||||| |||||||||||||||||||| |||||||    
T  28234477 agttaactgccgagaaaaacttctgcagtaaactaccgaggaatactactgaaaacttcggcagttaactgccgaggaaacctcaaacc 28234565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 40239669 - 40239718
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||| | |||||||||||||||||||| |||||||    
T  40239669 cgaggaaaactgaaaactttggcagttaactgccgaggaaacctcaaacc 40239718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 40239735 - 40239772
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgat 189  Q
    |||||||||||||||||||||||| |||||||||||||    
T  40239735 acaaaaaccataaattgtcattaaaaatatttattgat 40239772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 11566824 - 11566780
Alignment:
Q  88 aaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||||||| ||||||||||||||| |||| |||||||    
T  11566824 aaaactgaaaacttcggcagttaactgccgagaaaacctcaaacc 11566780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 56565818 - 56565898
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaa---aactgaaaacttcgacagttaactgccgaggaaac 124  Q
    ||||||||||||||||| ||||| ||||| ||| | |||| ||    ||||||||||||| ||||||||||||||| ||||    
T  56565818 agttaactaccgaggaaaacttctgcagttaactaccgaggaatactactgaaaacttcggcagttaactgccgagtaaac 56565898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 55588292 - 55588251
Alignment:
Q  89 aaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||||||||| ||||||| |||||||||||| |||||    
T  55588292 aaactgaaaacttcggcagttaattgccgaggaaacctcaaa 55588251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 9473627 - 9473587
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    ||||||||| ||||||||||||| ||||||||||| |||||    
T  9473627 acaaaaaccttaaattgtcattattaatatttattaatttt 9473587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 11269339 - 11269533
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||||||||| |              
T  11269339 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttctgcagttaactgccgaggaaacatcaaatc-tgttttttt 11269437  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  11269438 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgttccaaacaattgcagtat 11269533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 32744194 - 32743999
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||||||||||  ||||||||||||||||||| |||||||              
T  32744194 ctgcagttaactaccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggtagttaactgccgaggaaacctcaaacctttttttttt 32744095  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  32744094 ttttttttgacaaaaatcataaattgtcattaataatatttattgattttgaatgtttcaatcattattttgttacgtttgaaacaattgcagtat 32743999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 238
Target Start/End: Complemental strand, 19843442 - 19843252
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnnn 146  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| || |||||||||||| |||| |||||||                  
T  19843442 agttaactaccgaggaaaacttcggcagtaaactatcgaggaaaactgaaaacttcggcaattaactgccgagaaaacttcaaacctgtttttttttttt 19843343  T
Q  147 nnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
         ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  19843342 tttttacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtatgtttcaaacaattgcagtat 19843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 40799006 - 40798814
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||||||||||| ||||||||| ||||| | |||| |||||||||||||||| |||   |||||||||||||| |||||||              
T  40799006 ctgcagttaactaccgaggaaaacttcggcaataaactaccgaggaaaactgaaaacttcggcag---actgccgaggaaacctcaaacctgtttttttt 40798910  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40798909 ttttttttgacaaaaatcataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 40798814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 42148963 - 42148877
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42148963 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 42148877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 55175690 - 55175880
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||| ||||||| ||||||||||||||| | |||| |||| ||||||||||| |||||||||||||||||||| |||||||              
T  55175690 ctgcagttaactatcgaggaaaacttcggcagtaaactaccgaggaaaattgaaaacttcggcagttaactgccgaggaaacctcaaacc----tgtatt 55175785  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| |||||    
T  55175786 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttag-acgtttcaaacaattgtagtat 55175880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 52514991 - 52514907
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagt 236  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  52514991 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagt 52514907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 6144268 - 6144182
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6144268 acaaaatccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 6144182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 51755445 - 51755359
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  51755445 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgtagtat 51755359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 40798281 - 40798472
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||  ||||||| ||||||||||||||  | |||| |||||||||||||||| ||||||| ||||||| ||||||||   ||             
T  40798281 ctgcagttaactgtcgaggaaaacttcggcagtaaattaccgaggaaaactgaaaacttcggcagttaattgccgagaaaacatca---cacttgtttat 40798377  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  40798378 tttttgttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgcagtat 40798472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 4015036 - 4014950
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  4015036 acaaaaaccataaattatcattaataatatttattgattttgaatgtttcaatcattattttagtacgtttcaaacaattgcagtat 4014950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 11249409 - 11249323
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  11249409 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 11249323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 16851958 - 16851872
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  16851958 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattgcagtat 16851872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 4331739 - 4331662
Alignment:
Q  155 aaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattg 232  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4331739 aaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattg 4331662  T

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Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 21342979 - 21343064
Alignment:
Q  153 caaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  21342979 caaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttaatacgtttcaaacaattgcagtat 21343064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 10492228 - 10492312
Alignment:
Q  154 aaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10492228 aaaaaccataaactgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 10492312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 4014631 - 4014717
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  4014631 acaaaaatcataaattgtcattaataatatttattgattttgaatgtttaaatcattattttggtacatttcaaacaattgcagtat 4014717  T

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Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 11094300 - 11094386
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||    
T  11094300 acaaaaaccataaattgtctttaataatatttattgattttgaaagtttcaatcattattttggtacgttttaaacaattgcagtat 11094386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 27739456 - 27739370
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  27739456 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgttttaaacaattggagtat 27739370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 36719328 - 36719414
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  36719328 acaaaaaccttaaattgtcattattaatatttattgattttgattgtttcaatcattattttggtacgtttcaaacaattgcagtat 36719414  T

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Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 52514428 - 52514513
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  52514428 acaaaaaccataaattgtcattaataatatttattgattttgaatgttccaatcattatttt-gtacgtttcaaacaattgcagtat 52514513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 55176322 - 55176236
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  55176322 acaaaaactataaattgtcattaataatatttattgattttgaatgtttcaatgattattttgatacgtttcaaacaattgcagtat 55176236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 31977800 - 31977885
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| |||||    
T  31977800 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtatgtttcaaacaattgtagtat 31977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 34543017 - 34542931
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  34543017 acaaaaatcataaattgtctttaataatatttattgattttgaatgtttcactcattattttggtacgtttcaaacaattggagtat 34542931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 4330871 - 4330943
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttca 224  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4330871 acaaaatccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttca 4330943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 21343508 - 21343313
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnn 144  Q
    ||||||||||||||||||| |||| |||||||||| | |||| |||| ||||||||||| |||||||||| ||||||||| |||||||                
T  21343508 gcagttaactaccgaggaaaactttggcagtaaactaccgaggaaaattgaaaacttcggcagttaactgtcgaggaaacctcaaacctgattttttttt 21343409  T
Q  145 nnnnnnn---acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
              ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||| |||||||    
T  21343408 tttttttttgacaaaaaccataaattgtcattaataatatttattaattttgaatgttttaatcattatttt-gtacgtttcaaacaatcgcagtat 21343313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 12897988 - 12898067
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  12897988 acaaaaaccataaattgtctttaataatatttattgattttgaatgcttcaatcattattttggtacgttttaaacaatt 12898067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 39998825 - 39998904
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  39998825 acaaaaatcataaattgtcattaataatatttattgattttgaatgtttcaatcattattttagtacgtttcaaataatt 39998904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 40877747 - 40877661
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||| | |||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  40877747 acaaaaaccataaattatcataattaatatttattgattttgtatgtttcaatcattattttggtacgtttcaaacaattacagtat 40877661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 51753711 - 51753796
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||    
T  51753711 acaaaaaccataaattatcattaataatatttattgattatgaatgtttcaatcattatttt-gtatgtttcaaacaattgcagtat 51753796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 2063249 - 2063160
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||||||||| |||||| |||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  2063249 ctgcagttaactaccgaggaaaacttcgacagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 2063160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 28817043 - 28816954
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  28817043 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 28816954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 11248585 - 11248672
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  11248585 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 11248672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 11095131 - 11095042
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||||| |||||||| ||||||||||||||| | | || |||||||||||||||| |||||||||||||||||||| |||||    
T  11095131 gactgcagttaactgccgaggaaaacttcggcagtaaactacctaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 11095042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 15294663 - 15294744
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgc 233  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||  ||| ||||||||||||||    
T  15294663 acaaaaaccataaattgtcattattaatatatattgattttgaatgtttcaatcattattttaatacatttcaaacaattgc 15294744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 28816887 - 28816822
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggta 217  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  28816887 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggta 28816822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 19988675 - 19988587
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||||||||||| | |||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  19988675 ctgcagttaactgctgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaac 19988587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 11249566 - 11249478
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||||| |||||||| |||||||||||||||||||| |||||||    
T  11249566 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactg-aaacttcggcagttaactgccgaggaaacctcaaacc 11249478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 14016672 - 14016611
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattatttt 213  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14016672 acaaaaaccaaaaattgtcattaataatatttattgattttgaatgtttcaatcattatttt 14016611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 19341075 - 19341164
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||||||||| |||||| |||| |||   |||| ||||||| |||||||| ||||||||||||||||||||||||||||    
T  19341075 ctgcagttaactaccgaggaaaacttcgacagttaactgccgaggaaaactggaaacttcggcagttaactgccgaggaaacatcaaacc 19341164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 8475995 - 8476050
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcat 207  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8475995 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcat 8476050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 14042949 - 14043040
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||| ||||||| ||||||||||||||| |  ||| ||||||||||| |||| ||||||||||||||| |||| |||||||    
T  14042949 gactgcagttaactatcgaggaaaacttcggcagtaaactactgaggaaaactgaaaatttcggcagttaactgccgagcaaacctcaaacc 14043040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 34543178 - 34543089
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactg-aaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||||| ||||||||| ||||||||| |||||||||| ||||||    
T  34543178 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaaacttcggcagttaactaccgaggaaacctcaaac 34543089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 22935520 - 22935596
Alignment:
Q  163 aaattgtcattaataatatttattgatttttaat-gtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||| ||||||||||||||||| | | |||||||||||||||||||||| |||||| ||||||||||||    
T  22935520 aaattgtcattattaatatttattgattttgatttgtttcaatcattattttggtacatttcaagcaattgcagtat 22935596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 34542184 - 34542271
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| | ||||||||||||| | |||| ||||||||||| |||  |||||||||||||||||||| |||||    
T  34542184 ctgcagttaactgccgaggaaaagttcggcagtaaactaccgaggaaaactgaaaatttctgcagttaactgccgaggaaacctcaaa 34542271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 42148323 - 42148478
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||| ||||||| ||||||  ||||||| | | || |||||||||||||||| |||||||||||||||||||| | |||||              
T  42148323 ctgcagttaactatcgaggaaaacttcgaaagtaaactaccaagtaaaactgaaaacttcggcagttaactgccgaggaaacctgaaacc--tgattttt 42148420  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgttt 200  Q
             ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42148421 ttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgttt 42148478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 10492058 - 10492148
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccg-aggaaacatcaaacc 132  Q
    ||||||||||||  ||||||| ||||||||||||||| | |||| |||||||||||||||| || |||||||||| ||||||| |||||||    
T  10492058 ctgcagttaactgacgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcacttaactgccgaaggaaacctcaaacc 10492148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 19341560 - 19341484
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaat 230  Q
    ||||||||||||| |||| |||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||    
T  19341560 acaaaaaccataa-ttgtaattaataatatttattgattttgattgtttccatcattatttt-gtacgtttcaaacaat 19341484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 31977691 - 31977776
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||| ||||||| ||||||| ||||||| | |||| |||||||||||||||| |||||||||||  ||||||| |||||||    
T  31977691 agttaactatcgaggaaaacttcggtagtaaactaccgaggaaaactgaaaacttcggcagttaactgcaaaggaaacctcaaacc 31977776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 4331860 - 4331770
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact---gaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| | |||||| ||||||||||||||| |||||| || |||   |||||||||| |||||||||||||||||||| |||||||    
T  4331860 gcagttaactgctgaggaaaacttcggcagtaaactatcgaggaatactactgaaaacttcggcagttaactgccgaggaaacttcaaacc 4331770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 12898732 - 12898645
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||| | |||||||| ||||||| ||||||| | |||| |||||||||||||||  ||||||| |||||||||||| |||||    
T  12898732 ctgcagttaattgccgaggaaaacttcggtagtaaactaccgaggaaaactgaaaacttcagcagttaattgccgaggaaacctcaaa 12898645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 26245363 - 26245450
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| ||||| || ||||||| ||||||| | |||| |||||| ||||||| | |||||||||||||||||||| |||||    
T  26245363 ctgcagttaacttccgagaaaaacttcggtagtaaactaccgaggaaaactaaaaactttggcagttaactgccgaggaaacctcaaa 26245450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 27738636 - 27738722
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||||| |||| |||||||||||||||||||| |||||    
T  27738636 ctgcagttaactgccgaggaaaacttcggtagtaaactaccgaggaaa-ctgaaaatttcggcagttaactgccgaggaaacctcaaa 27738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 40872102 - 40872161
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttc 102  Q
    ||||||||||||||||||||| | ||||||||||||| |||||| |||||||||||||||    
T  40872102 ctgcagttaactaccgaggaaaaattcggcagtaaactatcgaggaaaactgaaaacttc 40872161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 19341479 - 19341429
Alignment:
Q  188 atttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  19341479 attttgaatgtttcaatcattattttgatacgtttcaaacaattgcagtat 19341429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 27739609 - 27739522
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||   ||||||||| |||||||||||||||||||  |||||||    
T  27739609 ctgcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaa--aaaaacttcggcagttaactgccgaggaaatctcaaacc 27739522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 27296956 - 27297028
Alignment:
Q  163 aaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||| |||||||||| |||||| | |||||||||||||||||   || ||||||||||||||||||||    
T  27296956 aaattgtcattattaatatttatagattttgattgtttcaatcattattt---tatgtttcaaacaattgcagtat 27297028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 16852103 - 16852017
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| |||||||| ||||||||||||||| | |||| ||||   ||||||||  |||||||||||||||||||| |||||||    
T  16852103 gcagttaactgccgaggaaaacttcggcagtaaactaccgaggaaaa-aaaaaacttcagcagttaactgccgaggaaacctcaaacc 16852017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 11094142 - 11094222
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaac 124  Q
    |||||||||||| |||||||| ||||||||||||||| |  ||| |||| || ||||||||  |||||||||||||||||||    
T  11094142 ctgcagttaactgccgaggaaaacttcggcagtaaactacggaggaaaattg-aaacttcggtagttaactgccgaggaaac 11094222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 14016737 - 14016688
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  14016737 cgaggaaaactgaaaacttcgacagttaactgctgaggaaacctcaaacc 14016688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 16851158 - 16851222
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaa 111  Q
    |||||||| |||||||| ||||||| ||||||| | |||| |||||||||||||||| |||||||    
T  16851158 agttaactgccgaggaaaacttcggtagtaaactaccgaggaaaactgaaaacttcggcagttaa 16851222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 52514319 - 52514409
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaa---ctgccgaggaaacatcaaa 130  Q
    ||||||||||||| ||||||| ||||||||||||||| |   |  |||||||||||||||| |||||||   ||||||||||||| |||||    
T  52514319 ctgcagttaactatcgaggaaaacttcggcagtaaactacgaacgaaaactgaaaacttcggcagttaactgctgccgaggaaacctcaaa 52514409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 53643654 - 53643602
Alignment:
Q  178 atatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaat 230  Q
    ||||||||| ||||| | ||||||||||||||||||||||| |||||||||||    
T  53643654 atatttattaattttgattgtttcaatcattattttggtacatttcaaacaat 53643602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 55282793 - 55282753
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  55282793 acaaaaaccataaattatcattaataatatttattgatttt 55282753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 8475887 - 8475975
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact---gaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||| | |||||| ||||| ||||||||| | |||| || |||   |||||||||| |||||||||||||||||||| |||||||    
T  8475887 agttaactgctgaggaaaacttcagcagtaaactaccgaggaatactactgaaaacttcggcagttaactgccgaggaaacctcaaacc 8475975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 40877843 - 40877759
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||  ||||||| ||||||||||||||| | ||||       |||||||||| |||||||||||||||||||| |||||||    
T  40877843 gactacagttaactttcgaggaaaacttcggcagtaaactaccgag-------gaaaacttcggcagttaactgccgaggaaacttcaaacc 40877759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 47443591 - 47443644
Alignment:
Q  176 taatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaa 229  Q
    ||||||||||||||||| | ||||| ||||||||||||| ||| ||||||||||    
T  47443591 taatatttattgattttgattgtttaaatcattattttgctacatttcaaacaa 47443644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 21342913 - 21342961
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaac 131  Q
    |||| |||||||||||||||| |||||||||| ||||||||| ||||||    
T  21342913 cgaggaaaactgaaaacttcggcagttaactgtcgaggaaacctcaaac 21342961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 53642909 - 53642968
Alignment:
Q  168 gtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaac 227  Q
    ||||||| |||||||||||||||||   |||||||||||||||||||  || ||||||||    
T  53642909 gtcattattaatatttattgattttggttgtttcaatcattattttgacacatttcaaac 53642968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 10492897 - 10492859
Alignment:
Q  94 gaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  10492897 gaaaacttcggcagttaactgccgaggaaacctcaaacc 10492859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 21343536 - 21343486
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact 93  Q
    ||||||||||||||||||||| ||||||||||| ||| | |||| ||||||    
T  21343536 ctgcagttaactaccgaggaaaacttcggcagttaactaccgaggaaaact 21343486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 52515045 - 52515007
Alignment:
Q  94 gaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  52515045 gaaaacttcgacagttcactgccgaggaaacctcaaacc 52515007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 11016764 - 11016837
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccga 118  Q
    |||||||||| | ||| || ||||||||||||||| |  ||| ||||||||||||||||  |||||| ||||||    
T  11016764 gcagttaactccagagaaaaacttcggcagtaaactactgaggaaaactgaaaacttcggtagttaattgccga 11016837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 6144340 - 6144308
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagt 75  Q
    ||||||||||||||||||||| |||||||||||    
T  6144340 ctgcagttaactaccgaggaaaacttcggcagt 6144308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 12897855 - 12897891
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaac 79  Q
    |||||||||||| |||||||| |||||||||||||||    
T  12897855 ctgcagttaactgccgaggaaaacttcggcagtaaac 12897891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 19341618 - 19341582
Alignment:
Q  94 gaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||| |||||||||||||||||||| |||||    
T  19341618 gaaaacttcggcagttaactgccgaggaaacctcaaa 19341582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 19341636 - 19341604
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagt 75  Q
    ||||||||||||||||||||| |||||||||||    
T  19341636 ctgcagttaactaccgaggaaaacttcggcagt 19341604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 33471573 - 33471613
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  33471573 acaaaaaccttaaattatcattattaatatttattgatttt 33471613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 55176372 - 55176336
Alignment:
Q  94 gaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||| |||||||||||||||||||| |||||    
T  55176372 gaaaacttcggcagttaactgccgaggaaacctcaaa 55176336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1644 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold1644
Description:

Target: scaffold1644; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 238
Target Start/End: Original strand, 1143 - 1336
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnn 143  Q
    ||||||||||||| |||||| |||| | |||||||| | ||||||||||||||||||||  ||||||||||||||| |||| |||||||               
T  1143 tgcagttaactacggaggaaaactttgacagtaaactagcgagaaaaactgaaaacttcagcagttaactgccgagtaaacctcaaacc-tgtttttttt 1241  T
Q  144 nnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
            |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1242 tttttttaacaaaaaccataaattgtcactaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 238
Target Start/End: Original strand, 17337674 - 17337876
Alignment:
Q  38 actgactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact---gaaaacttcgacagttaactgccgaggaaacatcaaaccan 134  Q
    |||| ||||||||||||||||||||| |||||||||||||||   |||| || |||   |||||||||| |||||||||||||||||||| |||||||      
T  17337674 actggctgcagttaactaccgaggaaaacttcggcagtaaactcccgaggaatactactgaaaacttcggcagttaactgccgaggaaacctcaaacc-t 17337772  T
Q  135 nnnnnnnnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
                     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  17337773 gtttttttttttttttaacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtatgtttcaaacaattgca 17337872  T
Q  235 gtat 238  Q
    ||||    
T  17337873 gtat 17337876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 6760759 - 6760673
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6760759 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 6760673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 15545758 - 15545951
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    |||||||||||||| |||||| ||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||| |||| ||              
T  15545758 ctgcagttaactactgaggaaaacttcggcagtaaactactgagaaaaactgaaaacttcggcagttaactgccgaggaaacctcaaccc-tgttttttt 15545856  T
Q  143 nnnnnnnnnacaaaaaccataaattgtcattaata---atatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
             |||||||| |||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15545857 ttttttttgacaaaaactataaattgtcattaatactaatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgca 15545951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 26351002 - 26350916
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26351002 acaaaaatcataaattgtcattaataatatttattgattttaaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 26350916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 32396048 - 32396134
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  32396048 acaaaaaccataaattgtcattaataatatttattgattatgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 32396134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 238
Target Start/End: Original strand, 2109580 - 2109769
Alignment:
Q  50 taactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnnnnnnnnn 149  Q
    ||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| ||| |||||||                     
T  2109580 taactgccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggcaacctcaaacctgttttttttttttttt 2109679  T
Q  150 nna-caaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
      | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  2109680 ttaacaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttgttacgttttaaacaattgcagtat 2109769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 32396792 - 32396713
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32396792 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaatt 32396713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 117371 - 117457
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  117371 acaaaaaccataaattgtcattaataagatttattaattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 117457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 13158529 - 13158615
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  13158529 acaaaaaccataaattatctttaataatatttattgattttaaatgtttcaatcattattttggtacgttttaaacaattgcagtat 13158615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 13163385 - 13163471
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  13163385 acaaaaaccataaattatctttaataatatttattgattttaaatgtttcaatcattattttggtacgttttaaacaattgcagtat 13163471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 26350113 - 26350199
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  26350113 acaaaaatcataaattgtcattaataatatttattgattttgaatgtttcaatcattattttaatacgtttcaaacaattgcagtat 26350199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 455971 - 455886
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  455971 acaaaaactataaattgttattaataatatttattgattttgaatgtttcaatcattattttggtacg-ttcaaacaattgcagtat 455886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 3177657 - 3177743
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||| | |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  3177657 acaaaaaccagatattgtcattattaatatttattgattttgaatgtttcaatcattattttggtacatttcaaacaattgcagtat 3177743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 8708104 - 8708190
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||||  |||||||||||    
T  8708104 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttgttatgtttcaattaattgcagtat 8708190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 32552620 - 32552705
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  32552620 acaaaaaccataatttgtcattaatgatatttattgattttgaatgtttcaatcattatttt-gtacgttttaaacaattgcagtat 32552705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 13164302 - 13164215
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||    
T  13164302 ctgcagttaactcccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 13164215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 6760914 - 6760825
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||| | |||||||| ||||||||||||||| | |||| || ||||||||||||| |||||||||||||||||||| |||||||    
T  6760914 ctgcagttaattgccgaggaaaacttcggcagtaaactaccgaggaacactgaaaacttcggcagttaactgccgaggaaacctcaaacc 6760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 455514 - 455569
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcat 207  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  455514 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcat 455569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 2110497 - 2110410
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| | |||||| ||||||||||||||| | |||| ||||||||||| |||| |||||||||||||||||||| |||||    
T  2110497 ctgcagttaactgctgaggaaaacttcggcagtaaactaccgaggaaaactgaaaaattcggcagttaactgccgaggaaacctcaaa 2110410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 7677990 - 7678068
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| ||| |||||||||||| ||| |||||||||||||    
T  7677990 acaaaaaccataaattatcattaataatatttattgattttgaatcttttaatcattatttt-gtatgtttcaaacaatt 7678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 25554736 - 25554824
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| || ||||| ||||||| ||||||||| |||| ||||||| |||||||| |||||||||||||||||||| |||||||    
T  25554736 ctgcagttaactgcctaggaaaacttcggaagtaaacaaccgaggaaaactg-aaacttcggcagttaactgccgaggaaacctcaaacc 25554824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 35097490 - 35097412
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||    ||||||| |||||||||||||||||||    
T  35097490 acaaaaaacataaattgtcattaataatatttattgattttgaatgttttaa----tattttgatacgtttcaaacaattgca 35097412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 456091 - 455997
Alignment:
Q  38 actgactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| ||||||||||||||| | ||  ||||| ||||||||| | |||| || ||||||||||||| |||||||||||||||||||| |||||||    
T  456091 actggctgcagttaactacccaagagaacttcagcagtaaactaccgaggaacactgaaaacttcggcagttaactgccgaggaaacctcaaacc 455997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 32396896 - 32396809
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| || ||||| |||||||||||||||   |||| || ||| ||||||||| |||||||||||||||||||| |||||    
T  32396896 ctgcagttaactccctaggaaaacttcggcagtaaactcccgaggaatactaaaaacttcggcagttaactgccgaggaaacctcaaa 32396809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 29359005 - 29359071
Alignment:
Q  153 caaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacg 219  Q
    ||||||| ||||||| |||||| ||||||||||||||||| ||| |||| |||||||||||||||||    
T  29359005 caaaaactataaattatcattattaatatttattgattttaaatatttcgatcattattttggtacg 29359071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 7677901 - 7677965
Alignment:
Q  68 tcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||||||||||||||| |||||||    
T  7677901 tcggcagtaaactaccgaggaaaactgaaaacttcggtagttaactgccgaggaaacctcaaacc 7677965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 117303 - 117352
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  117303 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 117352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 8708020 - 8708069
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  8708020 cgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 8708069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 26350007 - 26350098
Alignment:
Q  45 gcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact---gaaaacttcgacagttaactgccgaggaaacatcaaacca 133  Q
    |||||||||| |||||||| ||||| ||||||||| | |||| || |||   |||||||||| |||||||||||||||||||| | ||||||    
T  26350007 gcagttaactgccgaggaaaacttctgcagtaaactaccgaggaatactactgaaaacttcgtcagttaactgccgaggaaacctgaaacca 26350098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 15871817 - 15871889
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgag 119  Q
    |||||||||| |||||| |||||  |||||||| | |||| |||| ||||||||||| |||||||||||||||    
T  15871817 agttaactactgaggaaaacttcaacagtaaactaccgaggaaaattgaaaacttcggcagttaactgccgag 15871889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 6760045 - 6760107
Alignment:
Q  68 tcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| | |||| |||| ||||||||||| || ||||||||||||||||| |||||    
T  6760045 tcggcagtaaactagcgaggaaaattgaaaacttcggcaattaactgccgaggaaacctcaaa 6760107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 32552539 - 32552604
Alignment:
Q  67 ttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||| | |||| ||||| ||||| |||| ||||||||| |||||||||| |||||||    
T  32552539 ttcggcagtaaactaccgaggaaaacggaaaatttcggcagttaactaccgaggaaacttcaaacc 32552604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 32395946 - 32396032
Alignment:
Q  49 ttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact---gaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||| ||||||| ||||| ||||||||| | |||| || |||   ||||| |||| |||||||||||||||||||| |||||||    
T  32395946 ttaactatcgaggaaaacttctgcagtaaactaccgaggaatactactgaaaatttcggcagttaactgccgaggaaacctcaaacc 32396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 35242019 - 35242057
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatt 190  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  35242019 acaaaaaccatatattgtcattattaatatttattgatt 35242057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 8193233 - 8193204
Alignment:
Q  94 gaaaacttcgacagttaactgccgaggaaa 123  Q
    ||||||||||||||||||||||||||||||    
T  8193233 gaaaacttcgacagttaactgccgaggaaa 8193204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 238
Target Start/End: Original strand, 41065913 - 41066102
Alignment:
Q  41 gactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnn 140  Q
    |||||||||||||| |||||||| ||||||||||  |||   ||||||||||||||||||||| |||||||||||||||||||| ||||||             
T  41065913 gactgcagttaacttccgaggaaaacttcggcaggtaactcccgagaaaaactgaaaacttcggcagttaactgccgaggaaacctcaaac--------a 41066004  T
Q  141 nnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
               ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  41066005 tgttttttttgacaaaaaccataaattgtcattaataatattgattgattttgaatgattcaatcattattttggtacgtttcaaacaattggagtat 41066102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 18563869 - 18563783
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  18563869 acaaaaaccataaattgtcattaataatatttattgattttgaatatttcaatcattattttggtacgtttcaaacaattgcagtat 18563783  T

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Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 35651552 - 35651466
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  35651552 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacatttcaaacaattgcagtat 35651466  T

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Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 42912273 - 42912359
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42912273 acaaaaatcataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 42912359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 238
Target Start/End: Original strand, 8679586 - 8679782
Alignment:
Q  38 actgactgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnn 137  Q
    |||| |||||||||||||||||||||  ||||| |||||||| | |||| |||||||||||||||| || ||||||||||||||||| ||||||          
T  8679586 actggctgcagttaactaccgaggaaatcttcgacagtaaactaccgaggaaaactgaaaacttcggcaattaactgccgaggaaacctcaaac---ttt 8679682  T
Q  138 nnnnnnnnnnnnnnacaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagta 237  Q
                  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||    
T  8679683 tttttttttttttgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaattattatttt-gtatgtttcaaacaattgcagta 8679781  T

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Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 233
Target Start/End: Complemental strand, 8680288 - 8680096
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaaccannnnnnnnn 142  Q
    ||||||||||||| ||||||| |||||||||||||||   |||| |||||||||||||||| ||||||| |||||||||||| |||||||              
T  8680288 ctgcagttaactatcgaggaaaacttcggcagtaaacttccgaggaaaactgaaaacttcggcagttaattgccgaggaaacctcaaacctgtttttttt 8680189  T
Q  143 nnnnnnnnn--acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgc 233  Q
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  8680188 ttttttttgtgacaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaataattattttagtacgtttcaaacaattgc 8680096  T

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Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 20509475 - 20509392
Alignment:
Q  155 aaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  20509475 aaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattattttggtacgtttcacacaattgcagtat 20509392  T

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Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 3891668 - 3891754
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  3891668 acaaaaaccataaattgtctttaataatatttattgattttgaatgtttcaatcattattttgctacgttttaaacaattgcagtat 3891754  T

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Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 20743237 - 20743318
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgca 234  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  20743237 acaaaaaccataaattgtcattaataatatttattgattttgaatgtttcaatcattatttt-gtacgtttcaaacaattgca 20743318  T

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Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 3892482 - 3892395
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    |||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| |||||    
T  3892482 ctgcagttaactgccgaggaaaacttcggcagtaaactatcgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaa 3892395  T

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Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 20509592 - 20509504
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||||||||||| ||||||||||||||| | |||| ||||||||||| ||||| ||||||||||||||||||| |||||||    
T  20509592 tgcagttaactaccgaggaaaacttcggcagtaaactaccgaggaaaactgaaaatttcgatagttaactgccgaggaaacctcaaacc 20509504  T

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Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 5099487 - 5099561
Alignment:
Q  163 aaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagta 237  Q
    |||||||||||| |||||| |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  5099487 aaattgtcattattaatatgtattgattttgattgtttcaattattattttggtacgtttcaaacaattgcagta 5099561  T

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Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 22212116 - 22212201
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||| |||||||||||||  || ||||||||||||||||||||    
T  22212116 acaaaaaccataaattatcattaataatatttattgatttcaaatgttacaatcattatttt-atatgtttcaaacaattgcagtat 22212201  T

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Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 41066527 - 41066446
Alignment:
Q  156 aaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||| | ||||||||||||||||||||||    
T  41066527 aaaccataaattgtcattaattatatttattgattttgaatgttttaattattatttt-gaacgtttcaaacaattgcagtat 41066446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 3891514 - 3891602
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||| |||||||| |||| |||||||||| | |||| ||||||| |||||||| |||||||||||| ||||||| |||||||    
T  3891514 ctgcagttaactgccgaggaaaactttggcagtaaactaccgaggaaaactg-aaacttcggcagttaactgccaaggaaacctcaaacc 3891602  T

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Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 35281912 - 35281952
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35281912 acaaaaaccataaattgtcattaataatatttattgatttt 35281952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 35651619 - 35651570
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  35651619 cgaggaaaactgaaaacttcggcagttaactgctgaggaaacctcaaacc 35651570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 42912201 - 42912250
Alignment:
Q  83 cgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||| |||||||||||||||  |||||||||||||||||||| |||||||    
T  42912201 cgaggaaaactgaaaacttctgcagttaactgccgaggaaacctcaaacc 42912250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 41066592 - 41066544
Alignment:
Q  84 gagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  41066592 gagaaaaattgaaaacttcggcagttaactgtcgaggaaacctcaaacc 41066544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 5099847 - 5099799
Alignment:
Q  183 tattgatttttaatgtttcaatcattattttggtacgtttcaaacaatt 231  Q
    |||||||||| | ||||||||||||| ||||| ||| ||||||||||||    
T  5099847 tattgattttgattgtttcaatcattgttttgatacatttcaaacaatt 5099799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 13707973 - 13707925
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaa 91  Q
    ||||||||||||||||||||| || |||||||| ||| | |||||||||    
T  13707973 ctgcagttaactaccgaggaaaacatcggcagttaactaccgagaaaaa 13707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 25983471 - 25983511
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttt 192  Q
    ||||||||| ||||||||||||| ||||| |||||||||||    
T  25983471 acaaaaaccttaaattgtcattattaataattattgatttt 25983511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 69104 - 69018
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattgatttttaatgtttcaatcattattttggtacgtttcaaacaattgcagtat 238  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  69104 acaaaaactataaattgtctttaataatatttattgattttaaatgtttcaatcattattttggtacgttttaaacaattgcagtat 69018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 68409 - 68496
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaa 130  Q
    ||||||||||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  68409 ctgcagttaactaccgaggaaaacttcggtagtaaactaccgagaaaaactgaaaacttcgacagttaactgccgaggaaacctcaaa 68496  T

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Target: scaffold0016; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 69262 - 69174
Alignment:
Q  44 tgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||||||  ||| ||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  69262 tgcagttaactgtcgaagaaaacttcggcagtaaactaccgaggaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 69174  T

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Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 134356 - 134267
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||||||||||| ||||||||||||||| | | |  |||||||||||||||| |||||||||||||||||||| |||||||    
T  134356 ctgcagttaactaccgaggaaaacttcggcagtaaactaacaaagaaaactgaaaacttcggcagttaactgccgaggaaacctcaaacc 134267  T

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Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 134251 - 134219
Alignment:
Q  152 acaaaaaccataaattgtcattaataatattta 184  Q
    |||||||||||||||||||||||||||||||||    
T  134251 acaaaaaccataaattgtcattaataatattta 134219  T

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Target: scaffold0283 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 559 - 648
Alignment:
Q  43 ctgcagttaactaccgaggaagacttcggcagtaaacaatcgagaaaaactgaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    ||||||||||||| |||| || ||||||||||||||| |  ||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  559 ctgcagttaactatcgagaaaaacttcggcagtaaactactgagaaaagctgaaaacttcggcagttaactgccgaggaaacctcaaacc 648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 187
Target Start/End: Original strand, 12556 - 12591
Alignment:
Q  152 acaaaaaccataaattgtcattaataatatttattg 187  Q
    ||||||||||||||||||||||||||||||||||||    
T  12556 acaaaaaccataaattgtcattaataatatttattg 12591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 12443 - 12531
Alignment:
Q  47 agttaactaccgaggaagacttcggcagtaaacaatcgagaaaaact---gaaaacttcgacagttaactgccgaggaaacatcaaacc 132  Q
    |||||||| |||||||| ||||||||| ||||| | |||| || |||   |||||||| | |||||||||||||||||||| |||||||    
T  12443 agttaactcccgaggaaaacttcggcaataaactaccgaggaatactactgaaaactttggcagttaactgccgaggaaacctcaaacc 12531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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