View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1295_low_48 (Length: 251)
Name: NF1295_low_48
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1295_low_48 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 36354994 - 36355240
Alignment:
| Q |
1 |
ttaaataactttattttagcctatagtttttatttaataatatgactaaaacttgcttatattattatgttatctgtaaataactagcaacttatttaaa |
100 |
Q |
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| T |
36354994 |
ttaaataactttattttagcctatagtttttatttaataatatgactaaaacttgcttatattattatgtaatctgtaaataactagcaacttatttaaa |
36355093 |
T |
|
| Q |
101 |
ttttggtatgcatgattcaactgttgaatttgttaattaagagtgttaagaagacttactattagag----taactgagtcataaatcatatacacacct |
196 |
Q |
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| T |
36355094 |
ttttggtatacatgattcaactgttgaatttgttaattaagagtgttaagaagacttactattagagtaattaactgagtcataaatcatatacacacct |
36355193 |
T |
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| Q |
197 |
gaatctatatatgggcacttgactcattgtatatattcagaataatc |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36355194 |
gaatctatatatgggcacttgactcattgtatatattcagaataatc |
36355240 |
T |
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