View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1295_low_60 (Length: 233)

Name: NF1295_low_60
Description: NF1295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1295_low_60
NF1295_low_60
[»] chr7 (22 HSPs)
chr7 (1-194)||(21670017-21670210)
chr7 (1-196)||(16376543-16376738)
chr7 (1-200)||(21656664-21656863)
chr7 (1-192)||(43933546-43933737)
chr7 (1-196)||(40968927-40969122)
chr7 (1-194)||(13786206-13786399)
chr7 (1-195)||(21804571-21804765)
chr7 (1-195)||(27903416-27903610)
chr7 (1-195)||(42242153-42242347)
chr7 (1-194)||(38163339-38163532)
chr7 (1-196)||(3840639-3840834)
chr7 (1-195)||(15109664-15109858)
chr7 (1-195)||(33916946-33917140)
chr7 (1-194)||(21341859-21342052)
chr7 (1-178)||(24924115-24924292)
chr7 (1-194)||(27138528-27138721)
chr7 (1-198)||(31373492-31373689)
chr7 (1-170)||(39030276-39030445)
chr7 (1-194)||(17178237-17178431)
chr7 (1-162)||(21753524-21753685)
chr7 (129-175)||(21681073-21681119)
chr7 (134-178)||(21713643-21713687)
[»] chr3 (27 HSPs)
chr3 (1-192)||(39146476-39146667)
chr3 (1-194)||(26948834-26949027)
chr3 (1-195)||(20671285-20671479)
chr3 (1-195)||(36076453-36076647)
chr3 (1-194)||(4584434-4584627)
chr3 (1-201)||(43363604-43363804)
chr3 (1-195)||(12264236-12264430)
chr3 (1-195)||(38653926-38654120)
chr3 (1-194)||(49672598-49672791)
chr3 (4-192)||(31488450-31488638)
chr3 (1-195)||(45557883-45558077)
chr3 (1-194)||(1941720-1941913)
chr3 (1-194)||(21098340-21098533)
chr3 (1-194)||(34121391-34121584)
chr3 (1-194)||(49478244-49478437)
chr3 (1-195)||(49506348-49506542)
chr3 (1-194)||(3898458-3898651)
chr3 (1-194)||(54073063-54073259)
chr3 (2-189)||(55041588-55041781)
chr3 (10-194)||(40014653-40014837)
chr3 (1-152)||(24119243-24119394)
chr3 (28-162)||(26051334-26051469)
chr3 (92-195)||(6460167-6460269)
chr3 (1-36)||(26052236-26052271)
chr3 (140-194)||(13364022-13364076)
chr3 (129-185)||(37099708-37099764)
chr3 (33-69)||(41798957-41798993)
[»] chr4 (26 HSPs)
chr4 (1-195)||(16904951-16905145)
chr4 (1-194)||(33139471-33139664)
chr4 (1-192)||(45976992-45977183)
chr4 (1-192)||(46256070-46256261)
chr4 (1-195)||(16917887-16918081)
chr4 (1-195)||(35760617-35760811)
chr4 (1-195)||(52434660-52434854)
chr4 (1-194)||(37590804-37590997)
chr4 (1-185)||(44376088-44376272)
chr4 (1-194)||(30824922-30825115)
chr4 (1-198)||(31965965-31966162)
chr4 (1-194)||(48118534-48118724)
chr4 (1-194)||(12090459-12090652)
chr4 (1-196)||(53143260-53143455)
chr4 (1-195)||(41387162-41387356)
chr4 (1-194)||(37651702-37651895)
chr4 (1-195)||(47142799-47142993)
chr4 (1-196)||(39058355-39058550)
chr4 (1-171)||(31628510-31628680)
chr4 (1-170)||(52098214-52098384)
chr4 (18-192)||(54625003-54625177)
chr4 (1-143)||(45782480-45782622)
chr4 (1-131)||(50229769-50229900)
chr4 (100-154)||(50229712-50229766)
chr4 (153-197)||(18209699-18209743)
chr4 (41-87)||(34684603-34684649)
[»] chr6 (20 HSPs)
chr6 (1-194)||(13533803-13533996)
chr6 (1-194)||(15044758-15044951)
chr6 (1-197)||(17202468-17202664)
chr6 (1-196)||(3592929-3593124)
chr6 (1-196)||(12597263-12597458)
chr6 (1-194)||(2005464-2005657)
chr6 (1-192)||(19997701-19997892)
chr6 (1-194)||(10584728-10584921)
chr6 (1-194)||(33645978-33646171)
chr6 (1-194)||(28099597-28099790)
chr6 (1-197)||(2266804-2267008)
chr6 (69-195)||(1405562-1405688)
chr6 (1-90)||(8539636-8539725)
chr6 (1-127)||(17594852-17594979)
chr6 (55-158)||(33035523-33035626)
chr6 (1-90)||(25448785-25448874)
chr6 (139-201)||(8539727-8539789)
chr6 (153-195)||(162668-162710)
chr6 (150-194)||(6300709-6300753)
chr6 (150-194)||(6307519-6307563)
[»] chr8 (33 HSPs)
chr8 (1-196)||(11725226-11725421)
chr8 (1-192)||(18568901-18569092)
chr8 (1-195)||(28582891-28583085)
chr8 (1-194)||(44836945-44837138)
chr8 (1-194)||(18841940-18842133)
chr8 (1-194)||(35122322-35122515)
chr8 (1-201)||(10477973-10478173)
chr8 (1-195)||(30473883-30474077)
chr8 (1-195)||(39997727-39997921)
chr8 (1-194)||(6299020-6299213)
chr8 (1-194)||(15961168-15961361)
chr8 (1-196)||(18997736-18997931)
chr8 (1-195)||(18175417-18175611)
chr8 (1-195)||(32110860-32111054)
chr8 (1-195)||(44832185-44832379)
chr8 (1-194)||(24408912-24409105)
chr8 (1-170)||(39257479-39257648)
chr8 (1-197)||(995812-996008)
chr8 (1-171)||(40026836-40027006)
chr8 (1-189)||(11142497-11142691)
chr8 (1-171)||(28274237-28274407)
chr8 (1-155)||(19412868-19413022)
chr8 (7-162)||(18210656-18210811)
chr8 (1-143)||(19240699-19240841)
chr8 (1-143)||(19313883-19314025)
chr8 (1-131)||(24004790-24004920)
chr8 (1-83)||(23353688-23353770)
chr8 (1-162)||(25875322-25875492)
chr8 (139-194)||(23353622-23353677)
chr8 (145-194)||(19241006-19241055)
chr8 (145-194)||(19314190-19314239)
chr8 (157-194)||(40169720-40169757)
chr8 (33-69)||(4476885-4476921)
[»] chr2 (19 HSPs)
chr2 (1-196)||(8700297-8700492)
chr2 (1-195)||(19596362-19596556)
chr2 (1-194)||(42055233-42055428)
chr2 (1-195)||(6120588-6120782)
chr2 (1-194)||(41664546-41664739)
chr2 (1-192)||(31424045-31424236)
chr2 (1-195)||(18351587-18351781)
chr2 (1-194)||(41663273-41663466)
chr2 (1-194)||(44902118-44902310)
chr2 (1-197)||(20544861-20545057)
chr2 (1-192)||(26231261-26231452)
chr2 (1-163)||(999262-999424)
chr2 (1-194)||(36279455-36279647)
chr2 (1-194)||(34007714-34007902)
chr2 (41-195)||(27944795-27944949)
chr2 (11-194)||(42442004-42442193)
chr2 (1-153)||(16214860-16215012)
chr2 (28-169)||(692227-692368)
chr2 (150-194)||(25889039-25889083)
[»] chr1 (25 HSPs)
chr1 (1-195)||(9216067-9216261)
chr1 (1-197)||(34888683-34888879)
chr1 (1-194)||(4266417-4266610)
chr1 (1-194)||(38913747-38913940)
chr1 (1-197)||(23482704-23482900)
chr1 (1-189)||(35614103-35614291)
chr1 (1-194)||(1231832-1232025)
chr1 (1-195)||(7333980-7334174)
chr1 (1-194)||(18706509-18706701)
chr1 (1-194)||(38444667-38444860)
chr1 (1-194)||(2951366-2951559)
chr1 (1-194)||(52687114-52687306)
chr1 (1-195)||(18855232-18855425)
chr1 (1-170)||(50151096-50151265)
chr1 (1-154)||(39728016-39728169)
chr1 (41-194)||(31018200-31018353)
chr1 (41-192)||(50326077-50326228)
chr1 (1-155)||(35614852-35615005)
chr1 (1-151)||(19764593-19764743)
chr1 (1-99)||(2590371-2590468)
chr1 (100-194)||(29942153-29942247)
chr1 (77-161)||(5061335-5061419)
chr1 (1-103)||(19768500-19768602)
chr1 (145-194)||(52957056-52957105)
chr1 (151-197)||(2590466-2590512)
[»] chr5 (25 HSPs)
chr5 (1-194)||(20655049-20655242)
chr5 (1-196)||(38246863-38247058)
chr5 (1-195)||(5479232-5479426)
chr5 (1-195)||(34107337-34107531)
chr5 (3-196)||(16526304-16526497)
chr5 (1-194)||(20874724-20874917)
chr5 (1-194)||(34110688-34110881)
chr5 (1-194)||(33375798-33375993)
chr5 (1-201)||(1396025-1396225)
chr5 (1-195)||(10729441-10729635)
chr5 (11-195)||(2398941-2399125)
chr5 (1-194)||(17373161-17373357)
chr5 (1-185)||(25099245-25099429)
chr5 (1-185)||(25158335-25158519)
chr5 (1-172)||(24223186-24223357)
chr5 (1-155)||(27647966-27648120)
chr5 (1-158)||(29275660-29275817)
chr5 (1-152)||(6940545-6940696)
chr5 (1-159)||(33570342-33570500)
chr5 (1-137)||(1394543-1394679)
chr5 (51-194)||(40177127-40177270)
chr5 (1-143)||(14141158-14141300)
chr5 (1-135)||(17913777-17913911)
chr5 (139-194)||(8179753-8179808)
chr5 (155-196)||(19391258-19391299)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-196)||(46310-46505)
[»] scaffold0173 (1 HSPs)
scaffold0173 (1-197)||(19383-19579)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-194)||(149050-149243)
[»] scaffold0515 (1 HSPs)
scaffold0515 (23-194)||(6061-6232)
[»] scaffold0306 (1 HSPs)
scaffold0306 (23-194)||(6071-6242)
[»] scaffold0836 (1 HSPs)
scaffold0836 (42-194)||(5278-5430)


Alignment Details
Target: chr7 (Bit Score: 158; Significance: 3e-84; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 21670017 - 21670210
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21670017 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 21670116  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  21670117 attttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacctgtgcggcagcacgggtggaaagtctagt 21670210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 16376738 - 16376543
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16376738 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 16376639  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
     |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  16376638 gttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttt 16376543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 21656664 - 21656863
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21656664 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 21656763  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtttatta 200  Q
    ||||||||||||||||||||||||||||||| ||||| |||||  |||||||| ||||||||||||||| |||||||| ||||||||||||||| |||||    
T  21656764 attttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatgacccgtgtggtagcacgggtggaaagtctagtatatta 21656863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 43933737 - 43933546
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43933737 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 43933638  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    |||||||||||||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  43933637 attttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatgacccttgcggtagcacgggtggaaagtcta 43933546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 40968927 - 40969122
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40968927 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 40969026  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
     |||||||||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  40969027 gttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttt 40969122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 13786206 - 13786399
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13786206 atgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 13786305  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
     |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  13786306 gttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 13786399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 21804765 - 21804571
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21804765 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 21804666  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21804665 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 21804571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 27903610 - 27903416
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  27903610 atgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcgaattccaacatctgcatatatttgggaccacat 27903511  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
     |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  27903510 gttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatgacccgtgcggcagcacgggtggaaagtctagtt 27903416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 42242347 - 42242153
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42242347 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 42242248  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  42242247 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 42242153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 38163532 - 38163339
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38163532 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 38163433  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  38163432 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 38163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 3840834 - 3840639
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3840834 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 3840735  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  3840734 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgactcgtgcggcagcacgggtggaaagtctagttt 3840639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 15109858 - 15109664
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15109858 atgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 15109759  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| || ||||| |||||| ||||||||||||||||    
T  15109758 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgtccggtgcgatagcacgggtggaaagtctagtt 15109664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 33917140 - 33916946
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||| |||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33917140 atgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 33917041  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  33917040 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 33916946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 21341859 - 21342052
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||||||||||||||||||||||||||||||  ||| ||||    
T  21341859 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgagactacat 21341958  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||||||||| ||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  21341959 atttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 21342052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 24924115 - 24924292
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  24924115 atgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctacatatatttgggaccacat 24924214  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcac 178  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||    
T  24924215 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcac 24924292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 27138721 - 27138528
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27138721 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 27138622  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | ||||| ||||||||||||| |||||| ||||| |||||||||||||||    
T  27138621 atttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatgacctgtgcggcagcacgggtggaaagtctagt 27138528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 31373492 - 31373689
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| |||||||||||||||||||||||||||   ||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  31373492 atgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaatttcaacatctgcatatatttgggaccacat 31373591  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtttat 198  Q
    |||| |||||||||||||||||||||||||| ||||| ||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  31373592 atttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtttat 31373689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 39030445 - 39030276
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39030445 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 39030346  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgc 170  Q
     ||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||||||    
T  39030345 gttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatgacccgtgc 39030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 17178431 - 17178237
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaag-tgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccaca 99  Q
    |||||||||||| ||||||||||||||||||||||||   | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17178431 atgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 17178332  T
Q  100 tattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||| ||||||||||||||| |||||||||| ||||| ||||| | |||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  17178331 tatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatatgacccatgcggcagcacgggtggaaagtctagt 17178237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 21753685 - 21753524
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||  |||||||||||||||||  ||||||||    
T  21753685 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaaggttcgaattttaacatctgcatatatttgagaccacat 21753586  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 162  Q
     |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  21753585 gttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 21681073 - 21681119
Alignment:
Q  129 tttatttttatctaccacatctacaatgtatatgacccgtgcggtag 175  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  21681073 tttatttttgtctactacatttacgatgtatatgacccgtgcggtag 21681119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 21713643 - 21713687
Alignment:
Q  134 ttttatctaccacatctacaatgtatatgacccgtgcggtagcac 178  Q
    |||||||||| ||||||||  |||||||||||| |||||||||||    
T  21713643 ttttatctactacatctacggtgtatatgacccatgcggtagcac 21713687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 5e-83; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 39146476 - 39146667
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39146476 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 39146575  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | ||||| |||||||||||    
T  39146576 attttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccgtgcggcaacacagatggaaagtcta 39146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 26948834 - 26949027
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26948834 atgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 26948933  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  26948934 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 26949027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 20671285 - 20671479
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20671285 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 20671384  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||| || ||||| ||||||||||||||||    
T  20671385 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgactcgtgtggcagcacgggtggaaagtctagtt 20671479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 36076647 - 36076453
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  36076647 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcgaattccaacatctgcatatatttgggaccacat 36076548  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| ||||||||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  36076547 atttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 36076453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 4584627 - 4584434
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  4584627 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctgcatatatttgggaccacat 4584528  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  4584527 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 4584434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 43363804 - 43363604
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43363804 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 43363705  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtttatta 200  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  43363704 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtttatta 43363605  T
Q  201 t 201  Q
    |    
T  43363604 t 43363604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 12264236 - 12264430
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12264236 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 12264335  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  12264336 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 12264430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 38654120 - 38653926
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38654120 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 38654021  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38654020 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 38653926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 49672598 - 49672791
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49672598 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 49672697  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  49672698 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 49672791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 31488450 - 31488638
Alignment:
Q  4 aagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  31488450 aagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggacaacatatt 31488549  T
Q  104 ttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    | |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||| ||||| | |||||||||||    
T  31488550 tcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatataacccgtgcggcagcacggatggaaagtcta 31488638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 45558077 - 45557883
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  45558077 atgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatatacttgggaccacat 45557978  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||| || ||||||||| ||||||||||||||||    
T  45557977 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatgacctgtacggtagcactggtggaaagtctagtt 45557883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 1941913 - 1941720
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  ||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  1941913 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgaggttcgaattccaacatctgcatatatttgggaccacat 1941814  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  1941813 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 1941720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 21098340 - 21098533
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21098340 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 21098439  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  21098440 atttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 21098533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 34121391 - 34121584
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  34121391 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacgt 34121490  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  34121491 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 34121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 49478244 - 49478437
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  49478244 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatttgcatatatttgggaccacat 49478343  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| ||| ||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||||||| ||||| |||||||||||||||    
T  49478344 atttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgtaaatgactcgtgcggcagcacgggtggaaagtctagt 49478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 49506542 - 49506348
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49506542 atgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 49506443  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| || || ||||||||||||||||    
T  49506442 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagtacgggtggaaagtctagtt 49506348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 3898458 - 3898651
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  3898458 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttgggaccacat 3898557  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| ||||||||| |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  3898558 atttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 3898651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 54073063 - 54073259
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  54073063 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 54073162  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatg---tatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||   |||||||||||||||| ||||| |||||||||||||||    
T  54073163 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactatatgacccgtgcggcagcacgggtggaaagtctagt 54073259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 55041781 - 55041588
Alignment:
Q  2 tgaagtaacacacgattgataaaaat------taatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggac 95  Q
    ||||||||||||||||||||||||||      |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||    
T  55041781 tgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaacatctgcatatatttggaac 55041682  T
Q  96 cacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagt 189  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  55041681 cacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggtagcacgggtggaaagt 55041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 40014837 - 40014653
Alignment:
Q  10 cacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattc 109  Q
    ||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  110 tctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||||||||||||||||||||| ||||| | ||  | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 40014653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 24119243 - 24119394
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| ||    
T  24119243 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtttgaattccaacatctgcatatatttgggaccatat 24119342  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctac 152  Q
    |||| ||| ||||| |||||||||||||||| ||||| ||||| ||||||||    
T  24119343 atttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 26051469 - 26051334
Alignment:
Q  28 taatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttagg-accacatattttattctctttgatatgcattga 126  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||| || |||||||||| || ||||||||||| |||||||||||||||||||||    
T  26051469 taatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattga 26051370  T
Q  127 gatttatttttatctaccacatctacaatgtatatg 162  Q
    ||||| ||||| ||||| ||||||||||||||||||    
T  26051369 gatttgtttttgtctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 6460269 - 6460167
Alignment:
Q  92 ggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtct 191  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6460269 ggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtct 6460171  T
Q  192 agtt 195  Q
    ||||    
T  6460170 agtt 6460167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 26052271 - 26052236
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttt 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  26052271 atgaagtaacacacgattgataaaaattaatatttt 26052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 13364076 - 13364022
Alignment:
Q  140 ctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||| ||||||||||||||||||||||| |||| ||||| || |||||||    
T  13364076 ctactacatatacaatgtatatgacccgtgcggcagcagaggtgaaatgtctagt 13364022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 37099708 - 37099764
Alignment:
Q  129 tttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtgga 185  Q
    |||| |||| ||||| |||  ||||||||||||||||||||||| ||||| ||||||    
T  37099708 tttacttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 37099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 41798957 - 41798993
Alignment:
Q  33 tttttaaagtgaataaatgtggtgtctgaggttcgaa 69  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  41798957 tttttaaagtgaataaatgaggtgtctgaagttcgaa 41798993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 16905145 - 16904951
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16905145 atgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 16905046  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  16905045 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 16904951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 33139664 - 33139471
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  33139664 atgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttgggacaacat 33139565  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  33139564 atttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 33139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 45977183 - 45976992
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45977183 atgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 45977084  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| | ||||| | |||||||||||    
T  45977083 atttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatgacccgtgcagcagcacggatggaaagtcta 45976992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 46256070 - 46256261
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  46256070 atgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttccaattccaacatctgcatatatttgggaccacat 46256169  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  46256170 attttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 46256261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 16918081 - 16917887
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16918081 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 16917982  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16917981 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacaggtggaaagtctagtt 16917887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 35760617 - 35760811
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  35760617 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcgaattccaacatctgcatatatttgggaccacat 35760716  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||| ||||| |||||||| |||||||    
T  35760717 atttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatgactcgtgcggcagcacgggtggaaaatctagtt 35760811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 52434660 - 52434854
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52434660 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 52434759  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  52434760 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 52434854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 37590997 - 37590804
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  37590997 atgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatatatttgggaccacat 37590898  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
     ||||||||||||||||||||||||||||||  |||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  37590897 gttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 37590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 44376272 - 44376088
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  44376272 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgtgaccacat 44376173  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtgga 185  Q
     |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  44376172 gttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 44376088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 30825115 - 30824922
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  30825115 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccacat 30825016  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  30825015 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 30824922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 31966162 - 31965965
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31966162 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 31966063  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtttat 198  Q
    |||| |||||||||||||||||||||||||||||| | | ||  | |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  31966062 atttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtttat 31965965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 48118724 - 48118534
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  48118724 atgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgaggttcgaattccaacatctgcatatatttgggaccacat 48118625  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  48118624 atttcattctctttgatatgcattgagatttatttttgtct---acatctacaatgtatatgactcgtgcggcagcacgggtggaaagtctagt 48118534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 12090652 - 12090459
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||    |||||||  |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  12090652 atgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctgaggttcgaattccaacatctacatatatttgggaccacat 12090553  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  12090552 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 12090459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 53143455 - 53143260
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53143455 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 53143356  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| |||||||||||||||||||||||||| ||||| ||||  | |||||||||||||||||||||||||| ||||| |||| ||| ||||||||    
T  53143355 atttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgaaaaatctagttt 53143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 41387162 - 41387356
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||| || ||||||||||||||| |||||||||    
T  41387162 atgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcagcatctgcatatatttgggaccacat 41387261  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
     |||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||| ||| ||||| | ||||||||||||||    
T  41387262 gttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtacggcagcacggatggaaagtctagtt 41387356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 37651702 - 37651895
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  ||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  37651702 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacat 37651801  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| ||||||||| |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  37651802 atttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 37651895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 47142993 - 47142799
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||   ||||||||||||||||||||| |||||||||||||||||  ||||||||    
T  47142993 atgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgaggttcgaattctaacatctgcatatatttgagaccacat 47142894  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    || | |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  47142893 atgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgaccagtgcggcagcacgggtggaaagtctagtt 47142799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 39058550 - 39058355
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||  |||||||| |||||||||    
T  39058550 atgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgaggttcgaattccaacatcttgatatatttgggaccacat 39058451  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| ||||||||||||||  ||| | |||| ||||| ||||| | |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  39058450 atttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacaggtggaaaatctagttt 39058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 31628680 - 31628510
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  31628680 atgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgaggttcgaattccaacatctgcatatatttgagaccacat 31628581  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcg 171  Q
    |||| |||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||    
T  31628580 atttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcg 31628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 52098384 - 52098214
Alignment:
Q  1 atgaagtaacacacgattgataaaaatt-aatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccaca 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||| ||| |||||||||||||||||||||||| ||||||||    
T  52098384 atgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctgaagtttgaattccaacatctgcatatatttgggaccaca 52098285  T
Q  100 tattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgc 170  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| | || |||| ||||||||||||||||    
T  52098284 tatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatatgacccgtgc 52098214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 54625003 - 54625177
Alignment:
Q  18 tgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgat 117  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  54625003 tgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgat 54625102  T
Q  118 atgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    ||||||| |||||| ||||| ||||| || |||||||||||||| |||||||||  | |||| ||||||| ||||    
T  54625103 atgcattaagatttgtttttgtctactacgtctacaatgtatataacccgtgcgacatcacatgtggaaaatcta 54625177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 45782622 - 45782480
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  45782622 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatcttcatatatttaggaccacat 45782523  T
Q  101 attttattctctttgatatgcattgagatttatttttatctac 143  Q
    |||| ||||||||||||||  |||||||||||||||| |||||    
T  45782522 atttcattctctttgatatatattgagatttatttttgtctac 45782480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 50229900 - 50229769
Alignment:
Q  1 atgaagtaacacacgattgataaaaa-ttaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccaca 99  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50229900 atgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttcgaattccaacatctgcatatattttggaccaca 50229801  T
Q  100 tattttattctctttgatatgcattgagattt 131  Q
    | ||| ||||||||||||||||||||||||||    
T  50229800 tgtttcattctctttgatatgcattgagattt 50229769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  100 tattttattctctttgatatgcattgagatttatttttatctaccacatctacaa 154  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 18209699 - 18209743
Alignment:
Q  153 aatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 197  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  18209699 aatgtatatgacccgtgcggcagcacgggtggaaagtctagttta 18209743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 34684649 - 34684603
Alignment:
Q  41 gtgaataaatgtggtgtctgaggttcgaattccaacatctgcatata 87  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||    
T  34684649 gtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 8e-82; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 13533803 - 13533996
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13533803 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 13533902  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  13533903 atttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 13533996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 15044758 - 15044951
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15044758 atgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 15044857  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  15044858 attttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatgacctgtgcggcagcacgggtggaaagtctagt 15044951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 17202468 - 17202664
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17202468 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 17202567  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 197  Q
    |||| |||||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||  |||||| ||||| ||||||||||||||||||    
T  17202568 atttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatgacttgtgcggcagcacgggtggaaagtctagttta 17202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 3592929 - 3593124
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  3592929 atgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgaatatatttgggatcacat 3593028  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| |||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  3593029 atttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttt 3593124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 12597458 - 12597263
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12597458 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 12597359  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  12597358 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttt 12597263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 2005464 - 2005657
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2005464 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttaagaccacat 2005563  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
     |||||||||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||  ||||  ||||||||||||||    
T  2005564 gttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatgacccgtgcggccgcacgagtggaaagtctagt 2005657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 19997701 - 19997892
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19997701 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 19997800  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||    
T  19997801 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 19997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 10584921 - 10584728
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  10584921 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 10584822  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||| |  || ||||| |||||||||||||||    
T  10584821 atttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatgacccatatggcagcacgggtggaaagtctagt 10584728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 33645978 - 33646171
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  33645978 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccacat 33646077  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  33646078 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 33646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 28099790 - 28099597
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28099790 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatcagcatatatttgggaccacat 28099691  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  28099690 atttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 28099597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 2266804 - 2267008
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtgg--------tgtctgaggttcgaattccaacatctgcatatatttag 92  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  ||||        |||||||||||||||||||||||||||||||||||| |    
T  2266804 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtggtgtctgaggttcgaattccaacatctgcatatatttgg 2266903  T
Q  93 gaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||    
T  2266904 gaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 2267003  T
Q  193 gttta 197  Q
    |||||    
T  2267004 gttta 2267008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 1405688 - 1405562
Alignment:
Q  69 attccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgt 168  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 1405589  T
Q  169 gcggtagcacaggtggaaagtctagtt 195  Q
    |||| ||||| |||||||| |||||||    
T  1405588 gcggcagcacgggtggaaaatctagtt 1405562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8539636 - 8539725
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatattt 90  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8539636 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatattt 8539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17594852 - 17594979
Alignment:
Q  1 atgaagtaacacacgattgataaaaatt-aatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccaca 99  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||| ||| ||||| |||||||| ||||||||| ||||||||    
T  17594852 atgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctgaagtttgaatttcaacatctccatatatttgggaccaca 17594951  T
Q  100 tattttattctctttgatatgcattgag 127  Q
    ||||| ||| ||||||||||||||||||    
T  17594952 tatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 33035523 - 33035626
Alignment:
Q  55 tgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaa 154  Q
    |||||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  155 tgta 158  Q
    ||||    
T  33035623 tgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25448785 - 25448874
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatattt 90  Q
    ||||||||||||||||||||||||||||||||| |||   ||||||||  |||||||||||| ||||||||||||||||| |||||||||    
T  25448785 atgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgagtttcgaattccaacatctacatatattt 25448874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 8539727 - 8539789
Alignment:
Q  139 tctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtttattat 201  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  8539727 tctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtatattat 8539789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 162710 - 162668
Alignment:
Q  153 aatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||||||||||||||||||| ||||| ||||||||||||||||    
T  162710 aatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 6300753 - 6300709
Alignment:
Q  150 tacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||    
T  6300753 tacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6300709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 6307563 - 6307519
Alignment:
Q  150 tacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||    
T  6307563 tacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6307519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 11725226 - 11725421
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  11725226 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgagaccacat 11725325  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  11725326 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcagcagcacgggtggaaagtctagttt 11725421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 18568901 - 18569092
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  18568901 atgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgggaccacat 18569000  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    ||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  18569001 attttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcggtagcacgggtggaaagtcta 18569092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 28582891 - 28583085
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  28582891 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgagaccacat 28582990  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  28582991 atttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagtt 28583085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 44836945 - 44837138
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44836945 atgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 44837044  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||| ||||||||| |||||    
T  44837045 attttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatataacccgtgcggcagcacgggtggaaaggctagt 44837138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 18841940 - 18842133
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  18841940 atgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaacatctgcatatattttggaccacat 18842039  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || || |||||||||||||||    
T  18842040 atttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccgtgcggcagaacgggtggaaagtctagt 18842133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 35122515 - 35122322
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  35122515 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaacatctgcatatattttggaccacat 35122416  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||  ||||  |||||||||||||||    
T  35122415 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcgacagcaggggtggaaagtctagt 35122322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 10477973 - 10478173
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  10477973 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgtgaccacat 10478072  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtttatta 200  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  10478073 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtttatta 10478172  T
Q  201 t 201  Q
    |    
T  10478173 t 10478173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 30474077 - 30473883
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30474077 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 30473978  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  30473977 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 30473883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 39997727 - 39997921
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  39997727 atgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccacat 39997826  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  39997827 atttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaattctagtt 39997921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 6299213 - 6299020
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6299213 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 6299114  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  6299113 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 6299020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 15961168 - 15961361
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15961168 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 15961267  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  15961268 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 15961361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 18997736 - 18997931
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18997736 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 18997835  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  18997836 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggatagtctagttt 18997931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 18175417 - 18175611
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||| ||||||| |||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18175417 atgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 18175516  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18175517 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 18175611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 32111054 - 32110860
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  32111054 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccacat 32110955  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  32110954 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 32110860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 44832379 - 44832185
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44832379 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 44832280  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  44832279 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcaacacgggtggaaagtctagtt 44832185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 24408912 - 24409105
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  24408912 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgatgttcgaattccaacatctgcatatatttgggaccacat 24409011  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| ||| ||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| | ||| ||| |||||||||||    
T  24409012 atttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatgacccgtgcggcaacacgggtagaaagtctagt 24409105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 39257479 - 39257648
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  39257479 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctgcatatatttgggaccacat 39257578  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgc 170  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  39257579 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgc 39257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 996008 - 995812
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||| |||||||||||   ||||||||  |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  996008 atgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatatgcatatatttgggaccacat 995909  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 197  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  995908 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttta 995812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 40026836 - 40027006
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  40026836 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctgcatatatttgggaccacat 40026935  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcg 171  Q
    |||| ||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||    
T  40026936 atttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcg 40027006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 11142497 - 11142691
Alignment:
Q  1 atgaagtaacacacgattgataa------aaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttagga 94  Q
    |||||||||||||||||||||||      |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  11142497 atgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggga 11142596  T
Q  95 ccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagt 189  Q
     ||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||| ||||| ||||||||||    
T  11142597 gcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgatccgtgcggcagcacgggtggaaagt 11142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 28274407 - 28274237
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  28274407 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcgaattccaacatctgcgtatatttgggaccacat 28274308  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcg 171  Q
    |||| |||||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||| |||||||    
T  28274307 atttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatgatccgtgcg 28274237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 19412868 - 19413022
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19412868 atgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 19412967  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaat 155  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  19412968 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 18210811 - 18210656
Alignment:
Q  7 taacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatatttta 106  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||  |||||||||||| |    
T  18210811 taacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctgcatatatttgagaccacatatttca 18210712  T
Q  107 ttctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 162  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  18210711 ttctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 19240699 - 19240841
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19240699 atgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 19240798  T
Q  101 attttattctctttgatatgcattgagatttatttttatctac 143  Q
    |||| |||||||||||||||||||||||||| ||||| |||||    
T  19240799 atttcattctctttgatatgcattgagatttgtttttgtctac 19240841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 19313883 - 19314025
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19313883 atgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 19313982  T
Q  101 attttattctctttgatatgcattgagatttatttttatctac 143  Q
    |||| |||||||||||||||||||||||||| ||||| |||||    
T  19313983 atttcattctctttgatatgcattgagatttgtttttgtctac 19314025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24004920 - 24004790
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  24004920 atgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatatatttgggaccacat 24004821  T
Q  101 attttattctctttgatatgcattgagattt 131  Q
     ||||||||||||||||||||||||||||||    
T  24004820 gttttattctctttgatatgcattgagattt 24004790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23353770 - 23353688
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgca 83  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  23353770 atgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgaggttcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25875492 - 25875322
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgt--------------ggtgtctgaggttcgaattccaacatctgcatat 86  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||                |||||||||||||||||||| ||||||||||     
T  25875492 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctctttaatatgtctgaggttcgaattccagcatctgcata- 25875394  T
Q  87 atttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 162  Q
         ||| ||||| ||||||||||||| |||||||||||||||| ||||| ||||| | |||||| |||||||||    
T  25875393 ----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatatctacgatgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 23353677 - 23353622
Alignment:
Q  139 tctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23353677 tctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 23353622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 19241006 - 19241055
Alignment:
Q  145 acatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  19241006 acatctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagt 19241055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 19314190 - 19314239
Alignment:
Q  145 acatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  19314190 acatctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagt 19314239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 40169757 - 40169720
Alignment:
Q  157 tatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  40169757 tatatgacccgtgcggtagcacgggtggaaagactagt 40169720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 4476921 - 4476885
Alignment:
Q  33 tttttaaagtgaataaatgtggtgtctgaggttcgaa 69  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  4476921 tttttaaagtgaataaatgaggtgtttgaggttcgaa 4476885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 8700297 - 8700492
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  8700297 atgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgaggttcgaattccaacatctgcatatatttgggaccacat 8700396  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| ||||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  8700397 atttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttt 8700492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 19596556 - 19596362
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19596556 atgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 19596457  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| ||||||||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  19596456 atttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 19596362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 42055233 - 42055428
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  42055233 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggatcacct 42055332  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcg--gtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  42055333 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggtgtagcacgggtggaaagtctagt 42055428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 6120588 - 6120782
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6120588 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 6120687  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  6120688 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 6120782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 41664546 - 41664739
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41664546 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 41664645  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  41664646 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 41664739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 31424045 - 31424236
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||    
T  31424045 atgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcgaattccaacatctacatatatttgggaccacat 31424144  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  31424145 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgactcgtgcggcagcacgggtggaaagtcta 31424236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 18351587 - 18351781
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  18351587 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggttcgaattccaacatctgcatatatttgggaccacat 18351686  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18351687 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 18351781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 41663273 - 41663466
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41663273 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 41663372  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  41663373 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccatgcggcagcacgggtggaaagtctagt 41663466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 44902118 - 44902310
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||| |||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44902118 atgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 44902216  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  44902217 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 44902310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 20544861 - 20545057
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||  ||||||| | |||||||||||| ||||||||||||||||| |||||||||    
T  20544861 atgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcgaattctaacatctgcatatatttgggaccacat 20544960  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 197  Q
    |||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  20544961 atttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttta 20545057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 26231452 - 26231261
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  26231452 atgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgaggttcgaattccaacatctgaatatatttgagaccacat 26231353  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    |||| ||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||| ||| |||||||||||| |||| ||||||||    
T  26231352 atttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatataacctgtgcggtagcacgggtgaaaagtcta 26231261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 999424 - 999262
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  999424 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctacatatatttgggaccacat 999325  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatga 163  Q
     |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  999324 gttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatga 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 36279647 - 36279455
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  36279647 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgagattcgaattccaacatctgcatatatttgggaccacat 36279548  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggta-gcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||| |||||| |||| ||||| ||||| |||||||||||||||||||| |||||  || |||| |||||||||||||||    
T  36279547 atttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatgactcgtgc--tacgcacgggtggaaagtctagt 36279455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 34007902 - 34007714
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  34007902 atgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcgaattccaacatcggcatatatttgggactacat 34007803  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||| |||| ||||     ||||||| |||||||||||||||    
T  34007802 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatggatattaccc-----gtagcacgggtggaaagtctagt 34007714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 27944949 - 27944795
Alignment:
Q  41 gtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatc 140  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  141 taccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    ||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  27944849 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 27944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 42442004 - 42442193
Alignment:
Q  11 acacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg------aattccaacatctgcatatatttaggaccacatattt 104  Q
    |||||||||||||||||||||||||||   ||||||||  |||||||||||||||||      ||||||||||||||||||||||| |||||||||||||    
T  42442004 acacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattcgaattccaacatctgcatatatttgggaccacatattt 42442103  T
Q  105 tattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
     |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| | ||| |||||||||||||||    
T  42442104 cattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcaacacgggtggaaagtctagt 42442193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 16214860 - 16215012
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||  |||||||||||||| |||| ||||||||||| |||||||||    
T  16214860 atgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggttcgaattcctacatttgcatatattttggaccacat 16214959  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctaca 153  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  16214960 atttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 692368 - 692227
Alignment:
Q  28 taatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgag 127  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  692368 taatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgag 692269  T
Q  128 atttatttttatctaccacatctacaatgtatatgacccgtg 169  Q
    |||| ||||| ||||| |||| ||||||||||||||||||||    
T  692268 atttgtttttgtctactacatttacaatgtatatgacccgtg 692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 25889083 - 25889039
Alignment:
Q  150 tacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||| |||||  ||||||||||||||    
T  25889083 tacattgtatatgacccgtgcggcagcacgagtggaaagtctagt 25889039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 9216067 - 9216261
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9216067 atgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 9216166  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
     |||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  9216167 gttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 9216261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 34888879 - 34888683
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34888879 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 34888780  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 197  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  34888779 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttta 34888683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4266417 - 4266610
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4266417 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 4266516  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  4266517 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 4266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 38913940 - 38913747
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38913940 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 38913841  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  38913840 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 38913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 23482900 - 23482704
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  23482900 atgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcgaattccaacatctgcatatatttgggaccacat 23482801  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 197  Q
    |||| || ||||||||||||||||||||||| | ||| ||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  23482800 atttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatgactcgtgcggcagcacgggtggaaagtctagttta 23482704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 35614103 - 35614291
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| | |||||||||||||||||||||||||||| |||||||||    
T  35614103 atgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaagttcgaattccaacatctgcatatatttgggaccacat 35614202  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagt 189  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  35614203 atttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatgacccgtgcggtagcacgggtggaaagt 35614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 1231832 - 1232025
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1231832 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 1231931  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | || ||||||||||||||||||||||| ||||| |||||||||||||||    
T  1231932 atttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 1232025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 7333980 - 7334174
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  7333980 atgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgaggtttgaattccaacatctgcatatatttgggaccacat 7334079  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||| || ||||| |||||||| | ||||| |||| |||||||||||    
T  7334080 attttattctctttgatatgcattgagatttgtttttgtctactacatctaccatctatataacccgtgcagcagcacgggtgaaaagtctagtt 7334174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 18706701 - 18706509
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  18706701 atgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcgaattccaacatctgcatatattt-ggaccacat 18706603  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  18706602 atttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatgactcgtgcggcagcacgggtggaaagtctagt 18706509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 38444667 - 38444860
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  38444667 atgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcgaatttcaacatctgcatatatttgggaccacat 38444766  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||| | ||| |||||||||||||||    
T  38444767 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccatgcggcatcacgggtggaaagtctagt 38444860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 2951559 - 2951366
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2951559 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 2951460  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| | ||  | || ||||||||||||||||||||||| ||||| |||||||||||||||    
T  2951459 atttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 2951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 52687306 - 52687114
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  52687306 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcggattccaacatctgcatatatttgggaccacat 52687208  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| ||||||||| ||| |||||||||||| ||||| | ||| |||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  52687207 atttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatgacccgtgcgacagcacgggtggaaagtctagt 52687114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 18855425 - 18855232
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  18855425 atgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctacatatatttgggaccacat 18855326  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
     ||||||||||||||||||||||||||||||   ||| |||||  ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18855325 gttttattctctttgatatgcattgagattt-gatttgtctactgcatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 18855232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 50151096 - 50151265
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50151096 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 50151195  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgc 170  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  50151196 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgc 50151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 39728016 - 39728169
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39728016 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 39728115  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaa 154  Q
     |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  39728116 gttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 31018353 - 31018200
Alignment:
Q  41 gtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatc 140  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  31018353 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 31018254  T
Q  141 taccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  31018253 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 31018200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 41 - 192
Target Start/End: Original strand, 50326077 - 50326228
Alignment:
Q  41 gtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatc 140  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  50326077 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 50326176  T
Q  141 taccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 192  Q
    ||| | |||||||||||||||||||||||||| ||||| |||||||||||||    
T  50326177 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 50326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 35614852 - 35615005
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  35614852 atgaagtaacacacgattgataaaaattaatatttt-aaggtaaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgagaccacat 35614950  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaat 155  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||| |||| ||||||    
T  35614951 atttcattctctttgatatgcattaagatttgtttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 19764743 - 19764593
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  19764743 atgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaacatttgcatatatttgggaccacat 19764644  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatcta 151  Q
    |||| ||||| ||| |||||||||||||||| ||||| | ||| |||||||    
T  19764643 atttcattctttttaatatgcattgagatttgtttttgtatactacatcta 19764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2590371 - 2590468
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccaca 99  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||| | ||||||    
T  2590371 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtt-gaattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 29942153 - 29942247
Alignment:
Q  100 tattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 29942247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 5061335 - 5061419
Alignment:
Q  77 atctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatat 161  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19768500 - 19768602
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||| | |||||||| ||| ||||| | |||||||    
T  19768500 atgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgaggttcgaaattcaacatctacatgtatttggaaccacat 19768599  T
Q  101 att 103  Q
    |||    
T  19768600 att 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 52957056 - 52957105
Alignment:
Q  145 acatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  52957056 acatctacaatgtatatgacccgtgcggcagcacgggtggagagtctagt 52957105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 2590466 - 2590512
Alignment:
Q  151 acaatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 197  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  2590466 acaatgtatatgactcgtgcggcagcacgggtggaaagtctagttta 2590512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 20655242 - 20655049
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20655242 atgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 20655143  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
     |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  20655142 gttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 20655049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 38247058 - 38246863
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38247058 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 38246959  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  38246958 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttt 38246863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 5479232 - 5479426
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  5479232 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcgaattccaacatctacatatatttgggatcacat 5479331  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  | |||||||| |||||||||||    
T  5479332 atttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccgtgcgacaacacaggtgaaaagtctagtt 5479426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 34107531 - 34107337
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34107531 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 34107432  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  34107431 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 34107337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 16526497 - 16526304
Alignment:
Q  3 gaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatat 102  Q
    |||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16526497 gaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatat 16526398  T
Q  103 tttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    || |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  16526397 ttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttt 16526304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 20874724 - 20874917
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20874724 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 20874823  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  20874824 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 20874917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 34110688 - 34110881
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34110688 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 34110787  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  34110788 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 34110881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 33375798 - 33375993
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttagg--accac 98  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||  |||||    
T  33375798 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggacaccac 33375897  T
Q  99 atattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    || |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  33375898 atgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtttagt 33375993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 1396025 - 1396225
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1396025 atgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcagatatttgggaccacat 1396124  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtttatta 200  Q
    |||| |||||||||||||||||||||||||| ||||| ||| | |||||| ||||||||||||||||||||| ||||| |||||||| | |||||| |||    
T  1396125 atttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatgacccgtgcggcagcacgggtggaaaatatagtttttta 1396224  T
Q  201 t 201  Q
    |    
T  1396225 t 1396225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 10729635 - 10729441
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||| ||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10729635 atgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 10729536  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    |||| |||||||| ||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  10729535 atttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 10729441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 2399125 - 2398941
Alignment:
Q  11 acacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattct 110  Q
    |||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  2399125 acacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattct 2399026  T
Q  111 ctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 195  Q
    ||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2399025 ctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 2398941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 17373357 - 17373161
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17373357 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 17373258  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatg---tatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||   |||||||||||||||| ||||| |||||||||||||||    
T  17373257 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactatatgacccgtgcggcagcacgggtggaaagtctagt 17373161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 25099429 - 25099245
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||    
T  25099429 atgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcgaattccaacatctgcatatatttgtgaccacat 25099330  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtgga 185  Q
     ||||||||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  25099329 gttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 25099245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 25158519 - 25158335
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||    
T  25158519 atgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcgaattccaacatctgcatatatttgtgaccacat 25158420  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtgga 185  Q
     ||||||||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  25158419 gttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 25158335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 24223357 - 24223186
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||| |||| | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24223357 atgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 24223258  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcgg 172  Q
    |||| ||||||||| |||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  24223257 atttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatgacccgtgcgg 24223186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 27647966 - 27648120
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  27647966 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgtatatatttgggaccacat 27648065  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaat 155  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  27648066 atttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 29275660 - 29275817
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29275660 atgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 29275759  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgta 158  Q
     ||| ||||||||||||||||||||| |||| ||||| ||||  ||||||||||||||    
T  29275760 gtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgta 29275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 6940696 - 6940545
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  6940696 atgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcgaattccaacatctgcatatatttgggaccacat 6940597  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctac 152  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  6940596 atttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 33570500 - 33570342
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33570500 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 33570401  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtat 159  Q
    |||| |||||||||| ||||||||||||||| ||||| ||||| | |||||||||||||    
T  33570400 atttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgtat 33570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1394679 - 1394543
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  1394679 atgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgaggttcgaattccaacatctgcatatatttgggaccacat 1394580  T
Q  101 attttattctctttgatatgcattgagatttattttt 137  Q
    |||| |||||||||||||||||||||||||| |||||    
T  1394579 atttcattctctttgatatgcattgagatttgttttt 1394543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 40177127 - 40177270
Alignment:
Q  51 gtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatct 150  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| | ||||    
T  40177127 gtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctactatatct 40177226  T
Q  151 acaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  40177227 acaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 40177270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14141300 - 14141158
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14141300 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 14141201  T
Q  101 attttattctctttgatatgcattgagatttatttttatctac 143  Q
    |||| |||||||||||||||||||||||||| ||||| |||||    
T  14141200 atttcattctctttgatatgcattgagatttgtttttgtctac 14141158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 17913777 - 17913911
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||| |||||| | |||||||||||||||||||||| ||||||||| |||||||||    
T  17913777 atgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcgaattccaacatctacatatatttgggaccacat 17913876  T
Q  101 attttattctctttgatatgcattgagatttattt 135  Q
     ||||||||||||||||||||||||||||||||||    
T  17913877 gttttattctctttgatatgcattgagatttattt 17913911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 8179808 - 8179753
Alignment:
Q  139 tctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||| ||||||||||| ||||||| |||||||| ||||| |||||||||||||||    
T  8179808 tctactacatctacaatatatatgatccgtgcggcagcacgggtggaaagtctagt 8179753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 19391258 - 19391299
Alignment:
Q  155 tgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  19391258 tgtatatgacccgtgcggtagcacggatgaaaagtctagttt 19391299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 46310 - 46505
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46310 atgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 46409  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttt 196  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  46410 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagttt 46505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 19383 - 19579
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19383 atgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacat 19482  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 197  Q
    |||| ||| ||||| |||||||||||||||| ||||| ||||| |||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||    
T  19483 atttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtataggacccgtacggcagcacgggtggaaagtctagttta 19579  T

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Target: scaffold0022 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 149243 - 149050
Alignment:
Q  1 atgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||||||||||||||| |||||||||    
T  149243 atgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgatgttcgaattccaacatctgcatatatttgggaccacat 149144  T
Q  101 attttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  149143 atttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatatgacccgtgcggcagcacgggtggaaagtctagt 149050  T

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Target: scaffold0515 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 6232 - 6061
Alignment:
Q  23 aaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgca 122  Q
    |||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  6232 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6133  T
Q  123 ttgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  6132 ttgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6061  T

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Target: scaffold0306 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 6242 - 6071
Alignment:
Q  23 aaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgca 122  Q
    |||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  6242 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6143  T
Q  123 ttgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    ||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  6142 ttgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 5430 - 5278
Alignment:
Q  42 tgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatct 141  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  142 accacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 194  Q
    |  | |||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  5330 attatatctacaatgtatatgtcccgtgcggcagcacgggtggaaagtctagt 5278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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