View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12961_low_9 (Length: 282)
Name: NF12961_low_9
Description: NF12961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12961_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 8 - 268
Target Start/End: Complemental strand, 49087720 - 49087460
Alignment:
| Q |
8 |
agcagaacctgtggtgttatggcttggttcctataggacacaaaagcagagaacctgtcatagtaagcagagacacgcttgtttgggttcttaatgagga |
107 |
Q |
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| T |
49087720 |
agcataacctgcggtgttatggcttggttcctataggacacaaaagcagagaacctgtcatagtaagcagagacacgcttgtttgggttcttaatgagga |
49087621 |
T |
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| Q |
108 |
tgttgaactgcaaggtggcggaaaggagcggtggtgaggttgtgttgaagccatagatggcagcaccgacaaccgtgaagtggggtttgtgtggacggta |
207 |
Q |
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| T |
49087620 |
tgttgaactgcaaggtggcggaaaggagcggtggtgaggttgtgttgaagccatagatggcagcaccgacaaccgtgaagtggggtttgtgtggacggta |
49087521 |
T |
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| Q |
208 |
gacaagccagagaacaagtagagtgacaccgattagtaggagaaagatggtgaggaatgtg |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49087520 |
gacaagccagagaacaagtagagtgacaccgattagtaggagaaagatggtgaggaatgtg |
49087460 |
T |
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