View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12962_high_12 (Length: 255)
Name: NF12962_high_12
Description: NF12962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12962_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 40787430 - 40787663
Alignment:
| Q |
1 |
ccataaaatatttgattgtaaactacgctatttgagtatggcggatgagtttggctaccacaacttaacgaatcaaaatttaaaccacatctaaaagata |
100 |
Q |
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| T |
40787430 |
ccataaaatatttgattgtaaactacgctatttgagtatggtggatgagtttggctaccacaacttaacgaatcaaaatttaaaccacatctaaaagata |
40787529 |
T |
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| Q |
101 |
tattcacactaggattaatacatccaatatgaattcgattgtcgctaaacattagtataagatgaatacggagacaaatccgatgtttaatgtggatttg |
200 |
Q |
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| T |
40787530 |
tattcacactaggattaatacatcctatatgaattcgattgtcgctaaacattagtgtaagatgaataaggagacaaacccgatgtttaatgtggatttg |
40787629 |
T |
|
| Q |
201 |
attcttcagctgctactagttggtcaaaaccgaa |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
40787630 |
attcttcagctgctactagttggtcaaaaccgaa |
40787663 |
T |
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