View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12962_low_1 (Length: 741)

Name: NF12962_low_1
Description: NF12962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12962_low_1
NF12962_low_1
[»] chr5 (3 HSPs)
chr5 (336-723)||(28532648-28533029)
chr5 (220-338)||(28533069-28533187)
chr5 (505-550)||(41900503-41900548)
[»] chr3 (3 HSPs)
chr3 (220-330)||(51763081-51763191)
chr3 (494-552)||(51763388-51763446)
chr3 (494-551)||(51113195-51113252)
[»] chr6 (12 HSPs)
chr6 (262-336)||(6587982-6588056)
chr6 (494-552)||(6593929-6593987)
chr6 (367-464)||(6588144-6588241)
chr6 (494-550)||(6423907-6423963)
chr6 (495-548)||(6410699-6410752)
chr6 (206-252)||(14810035-14810081)
chr6 (494-548)||(19633104-19633158)
chr6 (495-552)||(6417092-6417149)
chr6 (502-551)||(6596241-6596290)
chr6 (493-534)||(7132323-7132364)
chr6 (493-534)||(7135246-7135287)
chr6 (493-534)||(7138169-7138210)
[»] chr4 (6 HSPs)
chr4 (493-552)||(553759-553818)
chr4 (206-253)||(1537252-1537299)
chr4 (497-552)||(21833278-21833333)
chr4 (202-299)||(53759964-53760058)
chr4 (206-258)||(1547374-1547426)
chr4 (574-611)||(7225253-7225290)
[»] chr7 (6 HSPs)
chr7 (493-552)||(10615713-10615772)
chr7 (206-255)||(15091285-15091334)
chr7 (493-553)||(10169047-10169107)
chr7 (568-612)||(10169137-10169181)
chr7 (493-553)||(10176572-10176632)
chr7 (568-612)||(10176662-10176706)
[»] chr8 (1 HSPs)
chr8 (507-551)||(32151969-32152013)
[»] chr1 (3 HSPs)
chr1 (488-552)||(7555198-7555262)
chr1 (680-723)||(19467621-19467664)
chr1 (493-550)||(19467428-19467485)


Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 336 - 723
Target Start/End: Complemental strand, 28533029 - 28532648
Alignment:
Q  336 cctacgtagcctcttcaaaaggttcacccatctcaattccctcaatctctctcgctatctcggtcacaacctcgacgaccttctctgccaaatctctcgt 435  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||   |    
T  28533029 cctacttagcctcttcaaaaggttcacccatctcaatttcctcgatctctctcgctatctaggtaacaacctcgacgaccttctctgccaaatctcagat 28532930  T
Q  436 ttctcgtcgttcaaattcacttcactcaaactcccaaacgttggtaaccgcttcccagcaaatggattgcgagctttttcacaaaacattacaactttga 535  Q
    ||| |||| |||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28532929 ttcccgtcattcaaaatcatttcactcaaacttccaaacgttggtaaccgcttcccagcaaatggattgcgagctttttcacaaaacattacaactttga 28532830  T
Q  536 cctctttcacttgttccggctttgttaacctatttcttatcgcagaatgtttccctttgctcgaagaactcgacctcgacctcatacttaaatacccctt 635  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||| ||| |||||||||||    
T  28532829 cctctttcacttgttccggctttgttaacctatttcttatcgcagaatgtttccctttgctcga------cgacctcgacctcagactaaaatacccctt 28532736  T
Q  636 aaattatatctctatgatagagactcggactcgtagttataacaatgggatagaggctctctcactttcacttctcaaactccgcaag 723  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  28532735 aaattatatctctatgatagagactcgaactcgtagttataacaatggggtagaggctctctcactttcacttcacaaactccgcaag 28532648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 220 - 338
Target Start/End: Complemental strand, 28533187 - 28533069
Alignment:
Q  220 tgttgggaatgtatattcagattcatcatcaacgacggtatggacgaaaacaacaaccgtcgcagcttgagttctctctccaccgtatccaaacggttcc 319  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28533187 tgttgggaatgtatcttcagattcatcatcaacgacggtatggacgaaaacaacaaccgtcgcaacttgagttctctctccaccgtatccaaacggttcc 28533088  T
Q  320 tctccatcaccggccgcct 338  Q
    ||||||||||||| |||||    
T  28533087 tctccatcaccggacgcct 28533069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 41900503 - 41900548
Alignment:
Q  505 cgagctttttcacaaaacattacaactttgacctctttcacttgtt 550  Q
    |||||||||||  |||| |||||||||||||||||| |||||||||    
T  41900503 cgagctttttccaaaaagattacaactttgacctctctcacttgtt 41900548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 51763081 - 51763191
Alignment:
Q  220 tgttgggaatgtatattcagattcatcatcaacgacggtatggacgaaaacaacaaccgtcgcagcttgagttctctctccaccgtatccaaacggttcc 319  Q
    |||||||||| ||| |||| ||||||||||||| | | |   |||||| | ||||||||||||| ||||| ||||||||||| ||| ||||||| |||||    
T  51763081 tgttgggaatctatcttcaaattcatcatcaacaatgatgatgacgaagaaaacaaccgtcgcaacttgaattctctctccatcgtttccaaacagttcc 51763180  T
Q  320 tctccatcacc 330  Q
    |||||||||||    
T  51763181 tctccatcacc 51763191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 51763388 - 51763446
Alignment:
Q  494 caaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttcc 552  Q
    ||||||| ||||||| |||||||||||| |||||||||||||| ||| |||||||||||    
T  51763388 caaatgggttgcgagttttttcacaaaagattacaactttgacatctctcacttgttcc 51763446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 551
Target Start/End: Original strand, 51113195 - 51113252
Alignment:
Q  494 caaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttc 551  Q
    ||||||||||||||||||| ||  |||| ||||||||| |||||||| ||||||||||    
T  51113195 caaatggattgcgagctttctcggaaaatattacaactctgacctctctcacttgttc 51113252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 6587982 - 6588056
Alignment:
Q  262 gacgaaaacaacaaccgtcgcagcttgagttctctctccaccgtatccaaacggttcctctccatcaccggccgc 336  Q
    ||||||||||||||||||| |||| ||| |||||||||| |||||||||| | ||||||| ||||||||| ||||    
T  6587982 gacgaaaacaacaaccgtcacagcatgatttctctctccgccgtatccaagcagttcctcgccatcaccgaccgc 6588056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 6593929 - 6593987
Alignment:
Q  494 caaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttcc 552  Q
    ||||||| ||||||| ||| |||||||| |||||||||||||||||||||| |||||||    
T  6593929 caaatggtttgcgagttttctcacaaaagattacaactttgacctctttcaattgttcc 6593987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 464
Target Start/End: Original strand, 6588144 - 6588241
Alignment:
Q  367 ctcaattccctcaatctctctcgctatctcggtcacaacctcgacgaccttctctgccaaatctctcgtttctcgtcgttcaaattcacttcactcaa 464  Q
    |||| ||||||||||||||| || |||  |||| |  |||||||||||||||| |||||||||||||||||| |  | || ||| |||||||||||||    
T  6588144 ctcacttccctcaatctctcgcgatatagcggttatgacctcgacgaccttctttgccaaatctctcgtttcccaacattgaaaatcacttcactcaa 6588241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 550
Target Start/End: Complemental strand, 6423963 - 6423907
Alignment:
Q  494 caaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgtt 550  Q
    ||||||| ||||||||||| || |||||||| ||||||||||||||| |||||||||    
T  6423963 caaatgggttgcgagctttctcccaaaacataacaactttgacctctctcacttgtt 6423907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 548
Target Start/End: Complemental strand, 6410752 - 6410699
Alignment:
Q  495 aaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttg 548  Q
    |||||| |||| || ||| || ||||||||||||||||||||||||||||||||    
T  6410752 aaatgggttgcaagttttctcccaaaacattacaactttgacctctttcacttg 6410699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 14810081 - 14810035
Alignment:
Q  206 atttacctgatgagtgttgggaatgtatattcagattcatcatcaac 252  Q
    ||||||||||||||||||||||| || | || |||||||||||||||    
T  14810081 atttacctgatgagtgttgggaacgtgtctttagattcatcatcaac 14810035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 494 - 548
Target Start/End: Complemental strand, 19633158 - 19633104
Alignment:
Q  494 caaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttg 548  Q
    ||||||| ||||||||||| ||  ||| ||||||||||||||||||| |||||||    
T  19633158 caaatgggttgcgagctttctccgaaagcattacaactttgacctctctcacttg 19633104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 552
Target Start/End: Complemental strand, 6417149 - 6417092
Alignment:
Q  495 aaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttcc 552  Q
    |||||| || |||||||| || ||||| | |||||||||||||||| |||||||||||    
T  6417149 aaatgggttacgagctttctcccaaaagaatacaactttgacctctctcacttgttcc 6417092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 551
Target Start/End: Original strand, 6596241 - 6596290
Alignment:
Q  502 ttgcgagctttttcacaaaacattacaactttgacctctttcacttgttc 551  Q
    ||||||| ||| || |||||||| ||||||||||||||| ||||||||||    
T  6596241 ttgcgagttttctcccaaaacataacaactttgacctctctcacttgttc 6596290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 7132364 - 7132323
Alignment:
Q  493 gcaaatggattgcgagctttttcacaaaacattacaactttg 534  Q
    |||||||| ||||||||||| || ||||||||||||||||||    
T  7132364 gcaaatgggttgcgagctttctcccaaaacattacaactttg 7132323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 7135287 - 7135246
Alignment:
Q  493 gcaaatggattgcgagctttttcacaaaacattacaactttg 534  Q
    |||||||| ||||||||||| || ||||||||||||||||||    
T  7135287 gcaaatgggttgcgagctttctcccaaaacattacaactttg 7135246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 7138210 - 7138169
Alignment:
Q  493 gcaaatggattgcgagctttttcacaaaacattacaactttg 534  Q
    |||||||| ||||||||||| || ||||||||||||||||||    
T  7138210 gcaaatgggttgcgagctttctcccaaaacattacaactttg 7138169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 493 - 552
Target Start/End: Complemental strand, 553818 - 553759
Alignment:
Q  493 gcaaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttcc 552  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||| |||| ||||||    
T  553818 gcaaatgggttgcgagctttctcccaaaacattacaactttgacctctctcacctgttcc 553759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 1537252 - 1537299
Alignment:
Q  206 atttacctgatgagtgttgggaatgtatattcagattcatcatcaacg 253  Q
    |||||||||||||||||||||||||| ||||||||||| ||| |||||    
T  1537252 atttacctgatgagtgttgggaatgtgtattcagattcctcaacaacg 1537299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 497 - 552
Target Start/End: Original strand, 21833278 - 21833333
Alignment:
Q  497 atggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttcc 552  Q
    |||| ||||||| |||| ||||||||||||| |||||||||||| |||||||||||    
T  21833278 atgggttgcgagtttttgcacaaaacattactactttgacctctctcacttgttcc 21833333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 202 - 299
Target Start/End: Original strand, 53759964 - 53760058
Alignment:
Q  202 tcagatttacctgatgagtgttgggaatgtatattcagattcatcatcaacgacggtatggacgaaaacaacaaccgtcgcagcttgagttctctctc 299  Q
    |||||||||||||||||||| ||||||| ||| |||| | || |||||||| ||   | |||| ||||||||||||||| || ||||| |||||||||    
T  53759964 tcagatttacctgatgagtgctgggaatctatcttcaaactcgtcatcaacaac---aaggacaaaaacaacaaccgtcacaacttgaattctctctc 53760058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 1547374 - 1547426
Alignment:
Q  206 atttacctgatgagtgttgggaatgtatattcagattcatcatcaacgacggt 258  Q
    |||||||||| ||||||||||||| ||| |||| ||||||||||| |||||||    
T  1547374 atttacctgacgagtgttgggaatctatcttcaaattcatcatcatcgacggt 1547426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 611
Target Start/End: Original strand, 7225253 - 7225290
Alignment:
Q  574 atcgcagaatgtttccctttgctcgaagaactcgacct 611  Q
    ||||| || |||||||||||||||||||||||||||||    
T  7225253 atcgcggattgtttccctttgctcgaagaactcgacct 7225290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000007; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 493 - 552
Target Start/End: Complemental strand, 10615772 - 10615713
Alignment:
Q  493 gcaaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttcc 552  Q
    |||||||| || |||||||| || ||||| |||||||||||||||||| |||||||||||    
T  10615772 gcaaatgggttacgagctttctcccaaaagattacaactttgacctctctcacttgttcc 10615713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 15091285 - 15091334
Alignment:
Q  206 atttacctgatgagtgttgggaatgtatattcagattcatcatcaacgac 255  Q
    ||||||| |||||||||||||||||  | |||||||||||||||||||||    
T  15091285 atttacccgatgagtgttgggaatgcgtcttcagattcatcatcaacgac 15091334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 553
Target Start/End: Original strand, 10169047 - 10169107
Alignment:
Q  493 gcaaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttccg 553  Q
    |||||||| ||||||| ||| || ||||| |||| ||||||||||||| ||||||||||||    
T  10169047 gcaaatgggttgcgagttttctctcaaaatattagaactttgacctctctcacttgttccg 10169107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 10169137 - 10169181
Alignment:
Q  568 tttcttatcgcagaatgtttccctttgctcgaagaactcgacctc 612  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||    
T  10169137 tttcttatcgcagaatgttttcctttgcttgaagaactcaacctc 10169181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 553
Target Start/End: Original strand, 10176572 - 10176632
Alignment:
Q  493 gcaaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttccg 553  Q
    |||||||| ||||||| ||| || ||||| |||| ||||||||||||| ||||||||||||    
T  10176572 gcaaatgggttgcgagttttctctcaaaatattagaactttgacctctctcacttgttccg 10176632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 10176662 - 10176706
Alignment:
Q  568 tttcttatcgcagaatgtttccctttgctcgaagaactcgacctc 612  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||    
T  10176662 tttcttatcgcagaatgttttcctttgcttgaagaactcaacctc 10176706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 551
Target Start/End: Complemental strand, 32152013 - 32151969
Alignment:
Q  507 agctttttcacaaaacattacaactttgacctctttcacttgttc 551  Q
    |||||| || |||||||||||||||||||||||| ||||||||||    
T  32152013 agctttctcccaaaacattacaactttgacctctctcacttgttc 32151969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 7555262 - 7555198
Alignment:
Q  488 tcccagcaaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgttcc 552  Q
    |||| |||| ||||||||||||||| || ||||| ||||||||||| |||||  |||||||||||    
T  7555262 tccctgcaattggattgcgagctttctcccaaaatattacaactttaacctcactcacttgttcc 7555198  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 723
Target Start/End: Original strand, 19467621 - 19467664
Alignment:
Q  680 atgggatagaggctctctcactttcacttctcaaactccgcaag 723  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  19467621 atggggtagaggctctttcacttgcacttctcaaactccgcaag 19467664  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 550
Target Start/End: Original strand, 19467428 - 19467485
Alignment:
Q  493 gcaaatggattgcgagctttttcacaaaacattacaactttgacctctttcacttgtt 550  Q
    |||||||| ||||||| |||  | ||||| |||||||||||||||||| |||||||||    
T  19467428 gcaaatgggttgcgagttttcactcaaaatattacaactttgacctctctcacttgtt 19467485  T

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