View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12964_high_17 (Length: 254)
Name: NF12964_high_17
Description: NF12964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12964_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 7887553 - 7887772
Alignment:
| Q |
12 |
atgaacctaaaaagggggaaatgaaagagttaaccaagtgacttatagtatagtcgtagatgcaccttcaaatgtggttgagatccatgttcatgttcga |
111 |
Q |
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| T |
7887553 |
atgaacctaaaaagggggaaatgaaagagttaaccaagtgacttatagtatagtcgtagatgcaccttcaaatgtggttgagatccatgttcatgttcga |
7887652 |
T |
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| Q |
112 |
atacttgaaattgttaaaaatggaatatttggaaagaatggaacactgccttttataagatagatgagtcagtgtctccctctgattcaggaaacggcaa |
211 |
Q |
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| T |
7887653 |
atacttgaaattgttaaaaatggaatatttggaaagaatggaacactgccttttataagatagatgagtcagtgtctcccactgattcaggaaacggcaa |
7887752 |
T |
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| Q |
212 |
tgcgcaatgtaatgttgcat |
231 |
Q |
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| T |
7887753 |
tgcgcaatgtaatgttgcat |
7887772 |
T |
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