View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12964_high_18 (Length: 238)
Name: NF12964_high_18
Description: NF12964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12964_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 21651308 - 21651090
Alignment:
| Q |
3 |
gcaggtagtgattctgctccacgaggattcgttggaacatacatctgcaaaagtaacagtttccaatcaggcttgataatcgtttttctaattatcttca |
102 |
Q |
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| T |
21651308 |
gcaggtagtgattctgctccacgaggattcgttggaacatacatctgcaaaagtaacagtttccaatcaggcttgataatcgtttttctaattatcttca |
21651209 |
T |
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| Q |
103 |
taaacggtattcctgcaaacctaaagtaaatataacatatagtggcaaactaaatgaaatccgtagcggcaatacagtatagagccattgtaagagagaa |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21651208 |
taaacggtattcctgcaaacctaaagtaaatataacatatagtggcaaactaaatgaaatccgtagcggcaatacagtatagagccattgtaagagagaa |
21651109 |
T |
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| Q |
203 |
aattactagtactaagcat |
221 |
Q |
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||||||||||||||||||| |
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| T |
21651108 |
aattactagtactaagcat |
21651090 |
T |
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