View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12965_high_17 (Length: 374)
Name: NF12965_high_17
Description: NF12965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12965_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 21 - 360
Target Start/End: Complemental strand, 38968401 - 38968052
Alignment:
| Q |
21 |
aataaaataaaaacatcatacaacatttcagattttaaaatatgaaccggatgaaaagatgagaaaagaaactccctcaatgggtgtgtagaaacataac |
120 |
Q |
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| T |
38968401 |
aataaaataaaaacatcatacaacatttcagattttaaaatatgaaccggatgaaaaggtgagaaaagaaactgcctcaatgggtatgtagaaacataac |
38968302 |
T |
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| Q |
121 |
acaatgaattgcttttcaactttttgggacaaaatttgttg----------acttagttaacctttaatgttaagagtaatgaatgatatttgaatattt |
210 |
Q |
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| T |
38968301 |
acaatgaattgcttttcagcttttcgggacaaaatttgttgtacctttttgacttagttagcctttaatgttaagagtaatgaatgatatttgaatattt |
38968202 |
T |
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| Q |
211 |
agagtgtgttagaaagagttcatttatacaatttattgaggattattattatattaataaacccgtgtcaatgttttgagagggtttataaataagtccc |
310 |
Q |
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| T |
38968201 |
agaatgtgtttaaaagagttcatttatacaatttattgaggattattattatattaataaacccgtgtcaatgttttgagagggtttataaataagtccc |
38968102 |
T |
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| Q |
311 |
gtgtctatgattttagcttatttaattaagcccttggtatatagcttaag |
360 |
Q |
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| T |
38968101 |
gtgtctatgattttagcttatttcattaagcccttggtatatagcttaag |
38968052 |
T |
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