View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12967_low_6 (Length: 466)

Name: NF12967_low_6
Description: NF12967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12967_low_6
NF12967_low_6
[»] chr3 (75 HSPs)
chr3 (258-447)||(9173751-9173940)
chr3 (305-457)||(21289700-21289852)
chr3 (302-448)||(628818-628964)
chr3 (305-451)||(8914762-8914908)
chr3 (302-448)||(50194230-50194376)
chr3 (305-448)||(51303538-51303681)
chr3 (302-448)||(53807753-53807899)
chr3 (305-448)||(51923777-51923920)
chr3 (153-238)||(9173624-9173709)
chr3 (305-457)||(7546665-7546817)
chr3 (304-451)||(35175453-35175600)
chr3 (302-448)||(14859537-14859683)
chr3 (362-448)||(45568340-45568426)
chr3 (302-448)||(29922104-29922250)
chr3 (302-448)||(29971257-29971403)
chr3 (356-457)||(21533695-21533796)
chr3 (395-448)||(23799805-23799858)
chr3 (388-448)||(27706121-27706181)
chr3 (342-449)||(12050542-12050649)
chr3 (305-448)||(19339226-19339368)
chr3 (342-457)||(42460836-42460951)
chr3 (150-240)||(9172337-9172418)
chr3 (382-448)||(38860007-38860073)
chr3 (355-448)||(4711582-4711675)
chr3 (356-457)||(21431714-21431815)
chr3 (356-457)||(43488476-43488577)
chr3 (373-448)||(12946862-12946937)
chr3 (305-448)||(16235476-16235619)
chr3 (395-446)||(19619853-19619904)
chr3 (378-457)||(21313159-21313238)
chr3 (297-448)||(33579922-33580073)
chr3 (390-448)||(20987650-20987708)
chr3 (393-451)||(26739249-26739307)
chr3 (382-448)||(27856292-27856358)
chr3 (362-448)||(40487432-40487518)
chr3 (356-457)||(6954582-6954683)
chr3 (404-457)||(9998616-9998669)
chr3 (404-457)||(10108385-10108438)
chr3 (404-457)||(10229625-10229678)
chr3 (404-457)||(10233219-10233272)
chr3 (362-451)||(46304412-46304501)
chr3 (361-457)||(9797420-9797516)
chr3 (404-448)||(48650629-48650673)
chr3 (356-448)||(52923012-52923104)
chr3 (404-447)||(43017037-43017080)
chr3 (342-445)||(54149078-54149181)
chr3 (393-447)||(7792083-7792137)
chr3 (321-451)||(47896218-47896347)
chr3 (395-448)||(38545939-38545992)
chr3 (383-448)||(44805157-44805222)
chr3 (17-53)||(9172435-9172471)
chr3 (404-448)||(44959868-44959912)
chr3 (393-437)||(46220801-46220845)
chr3 (393-444)||(3085200-3085251)
chr3 (356-447)||(7448810-7448901)
chr3 (356-447)||(7456952-7457043)
chr3 (370-437)||(40556817-40556884)
chr3 (302-448)||(4821854-4821999)
chr3 (395-448)||(53099930-53099982)
chr3 (399-447)||(26275715-26275763)
chr3 (393-433)||(53508364-53508404)
chr3 (342-457)||(12149670-12149785)
chr3 (393-448)||(52115916-52115971)
chr3 (409-447)||(13458985-13459023)
chr3 (356-454)||(18011121-18011219)
chr3 (382-428)||(32246550-32246596)
chr3 (305-447)||(47041944-47042086)
chr3 (343-448)||(20464865-20464970)
chr3 (407-448)||(32701643-32701684)
chr3 (378-427)||(51487218-51487267)
chr3 (160-236)||(23691618-23691694)
chr3 (160-236)||(23710057-23710133)
chr3 (160-236)||(23728513-23728589)
chr3 (160-236)||(23746969-23747045)
chr3 (393-449)||(38142663-38142719)
[»] chr1 (55 HSPs)
chr1 (302-448)||(24583001-24583147)
chr1 (302-448)||(47132954-47133100)
chr1 (302-437)||(44915690-44915825)
chr1 (302-448)||(19060960-19061106)
chr1 (302-457)||(44543323-44543478)
chr1 (305-448)||(48750239-48750382)
chr1 (302-451)||(16262912-16263061)
chr1 (321-448)||(14872709-14872836)
chr1 (356-457)||(4413219-4413320)
chr1 (356-448)||(21947513-21947605)
chr1 (305-448)||(36775605-36775748)
chr1 (157-239)||(29406831-29406913)
chr1 (383-448)||(34412987-34413052)
chr1 (380-448)||(24583275-24583343)
chr1 (321-448)||(3228339-3228466)
chr1 (302-444)||(49626964-49627106)
chr1 (342-445)||(15492378-15492481)
chr1 (305-448)||(37720044-37720187)
chr1 (342-448)||(31317827-31317933)
chr1 (370-448)||(32679036-32679114)
chr1 (383-448)||(14489404-14489469)
chr1 (319-448)||(25564066-25564195)
chr1 (356-448)||(7337558-7337650)
chr1 (305-457)||(23291528-23291680)
chr1 (356-448)||(35484286-35484378)
chr1 (321-448)||(5983906-5984033)
chr1 (393-448)||(6217718-6217773)
chr1 (395-457)||(7836682-7836744)
chr1 (393-447)||(16161970-16162024)
chr1 (395-457)||(16989515-16989577)
chr1 (395-448)||(34878173-34878226)
chr1 (321-457)||(10776347-10776483)
chr1 (404-448)||(19596355-19596399)
chr1 (356-436)||(45415663-45415743)
chr1 (341-457)||(49504481-49504597)
chr1 (342-448)||(31919079-31919186)
chr1 (302-448)||(13144707-13144853)
chr1 (342-448)||(31984252-31984358)
chr1 (356-447)||(41740478-41740571)
chr1 (161-235)||(51163823-51163897)
chr1 (382-448)||(51373753-51373819)
chr1 (404-457)||(11462368-11462421)
chr1 (395-448)||(50377467-50377520)
chr1 (404-448)||(32395151-32395195)
chr1 (406-449)||(5856064-5856107)
chr1 (382-449)||(9341857-9341924)
chr1 (155-237)||(27789319-27789401)
chr1 (302-436)||(31692374-31692508)
chr1 (161-239)||(37403316-37403394)
chr1 (399-448)||(4397115-4397164)
chr1 (404-457)||(29738550-29738603)
chr1 (379-448)||(34529202-34529271)
chr1 (396-448)||(15431561-15431613)
chr1 (405-449)||(30712195-30712239)
chr1 (355-446)||(41081581-41081673)
[»] chr6 (41 HSPs)
chr6 (305-448)||(14801879-14802022)
chr6 (305-457)||(8102778-8102930)
chr6 (305-457)||(546082-546235)
chr6 (342-457)||(12170557-12170672)
chr6 (305-436)||(9380075-9380206)
chr6 (302-445)||(30493581-30493724)
chr6 (342-434)||(127758-127850)
chr6 (305-448)||(30776715-30776858)
chr6 (302-448)||(26588367-26588513)
chr6 (356-448)||(3913469-3913561)
chr6 (305-457)||(23128670-23128822)
chr6 (356-444)||(31296923-31297011)
chr6 (304-444)||(31852092-31852232)
chr6 (342-448)||(30608410-30608516)
chr6 (361-431)||(32327129-32327199)
chr6 (356-448)||(1523511-1523603)
chr6 (404-448)||(33053063-33053107)
chr6 (342-457)||(606293-606408)
chr6 (157-228)||(28844810-28844881)
chr6 (404-457)||(67887-67940)
chr6 (395-448)||(20225993-20226046)
chr6 (395-448)||(22119977-22120030)
chr6 (356-444)||(528249-528337)
chr6 (384-448)||(14846116-14846180)
chr6 (356-447)||(7976083-7976174)
chr6 (321-448)||(29255341-29255468)
chr6 (317-444)||(32191629-32191756)
chr6 (310-444)||(1933591-1933725)
chr6 (407-457)||(21426572-21426622)
chr6 (382-451)||(27097534-27097603)
chr6 (356-448)||(29743100-29743195)
chr6 (343-448)||(34018650-34018755)
chr6 (404-448)||(9341546-9341590)
chr6 (404-451)||(14174963-14175010)
chr6 (404-451)||(14179499-14179546)
chr6 (302-448)||(29319772-29319919)
chr6 (395-457)||(7515088-7515150)
chr6 (395-444)||(13546600-13546649)
chr6 (395-448)||(30894741-30894794)
chr6 (383-432)||(34185604-34185653)
chr6 (361-425)||(4010430-4010494)
[»] chr8 (51 HSPs)
chr8 (302-451)||(14916078-14916226)
chr8 (321-457)||(7677167-7677303)
chr8 (302-457)||(15344358-15344513)
chr8 (302-457)||(15433423-15433578)
chr8 (302-457)||(15524727-15524882)
chr8 (305-448)||(41896570-41896713)
chr8 (305-448)||(42046274-42046417)
chr8 (342-446)||(16247118-16247222)
chr8 (305-457)||(18890583-18890735)
chr8 (305-448)||(471057-471202)
chr8 (342-444)||(7198092-7198194)
chr8 (356-449)||(20553133-20553226)
chr8 (302-457)||(1236581-1236736)
chr8 (302-448)||(1239290-1239436)
chr8 (305-447)||(29617168-29617310)
chr8 (356-449)||(20559636-20559729)
chr8 (356-449)||(20571198-20571291)
chr8 (356-457)||(43833880-43833981)
chr8 (342-442)||(8867895-8867995)
chr8 (305-457)||(14585730-14585882)
chr8 (305-436)||(39657507-39657638)
chr8 (302-422)||(24099169-24099294)
chr8 (361-457)||(7883125-7883221)
chr8 (356-448)||(23230747-23230839)
chr8 (356-448)||(37971387-37971479)
chr8 (342-457)||(10377779-10377894)
chr8 (307-425)||(8443427-8443545)
chr8 (394-447)||(28086706-28086759)
chr8 (356-448)||(3673545-3673637)
chr8 (357-437)||(18846370-18846450)
chr8 (404-448)||(31013501-31013545)
chr8 (305-444)||(5333482-5333621)
chr8 (321-448)||(16928650-16928777)
chr8 (378-457)||(34493128-34493207)
chr8 (305-448)||(45445704-45445847)
chr8 (378-448)||(5046879-5046949)
chr8 (342-448)||(27110358-27110464)
chr8 (343-448)||(9637302-9637407)
chr8 (395-447)||(29939443-29939495)
chr8 (305-444)||(33347418-33347557)
chr8 (399-449)||(25238485-25238535)
chr8 (342-444)||(40211199-40211301)
chr8 (395-448)||(30568214-30568267)
chr8 (399-448)||(40618966-40619015)
chr8 (178-239)||(42756668-42756729)
chr8 (399-443)||(14913235-14913279)
chr8 (321-448)||(17693506-17693634)
chr8 (399-448)||(12184436-12184485)
chr8 (399-448)||(12428864-12428913)
chr8 (383-432)||(26469055-26469104)
chr8 (399-447)||(24186555-24186603)
[»] chr7 (43 HSPs)
chr7 (305-444)||(22742997-22743136)
chr7 (305-457)||(28476280-28476431)
chr7 (119-239)||(31238827-31238951)
chr7 (302-447)||(24069290-24069435)
chr7 (305-448)||(35133000-35133143)
chr7 (302-457)||(35665021-35665176)
chr7 (305-443)||(38880477-38880616)
chr7 (356-444)||(9450036-9450124)
chr7 (356-448)||(12141203-12141295)
chr7 (356-448)||(39171485-39171577)
chr7 (342-446)||(46700125-46700229)
chr7 (356-448)||(48061526-48061618)
chr7 (321-448)||(42978679-42978806)
chr7 (342-448)||(19404652-19404758)
chr7 (302-448)||(41553329-41553475)
chr7 (342-448)||(48930797-48930903)
chr7 (356-448)||(13796824-13796916)
chr7 (393-448)||(3398331-3398386)
chr7 (342-448)||(47590401-47590507)
chr7 (363-457)||(48316698-48316792)
chr7 (356-457)||(8001432-8001533)
chr7 (356-448)||(28044651-28044743)
chr7 (321-457)||(37837344-37837480)
chr7 (404-448)||(40993309-40993353)
chr7 (384-448)||(45349694-45349758)
chr7 (305-448)||(38798834-38798977)
chr7 (399-448)||(43369649-43369698)
chr7 (372-448)||(4999924-5000000)
chr7 (305-449)||(24770299-24770443)
chr7 (382-446)||(25287083-25287147)
chr7 (404-448)||(28407813-28407857)
chr7 (404-448)||(34899502-34899546)
chr7 (382-446)||(46244149-46244213)
chr7 (406-448)||(5348487-5348529)
chr7 (370-448)||(9977105-9977183)
chr7 (356-444)||(19296974-19297062)
chr7 (407-447)||(27341705-27341745)
chr7 (355-447)||(30756715-30756807)
chr7 (409-448)||(3222999-3223038)
chr7 (393-448)||(46822638-46822692)
chr7 (411-457)||(39328679-39328725)
chr7 (378-447)||(11343935-11344004)
chr7 (342-447)||(25255317-25255422)
[»] scaffold0009 (1 HSPs)
scaffold0009 (302-448)||(57983-58129)
[»] chr4 (59 HSPs)
chr4 (356-457)||(21686128-21686229)
chr4 (305-451)||(27652015-27652160)
chr4 (302-448)||(52944379-52944525)
chr4 (321-457)||(47320298-47320434)
chr4 (305-448)||(31891182-31891325)
chr4 (305-448)||(36194780-36194922)
chr4 (356-448)||(2520901-2520993)
chr4 (355-457)||(29960835-29960937)
chr4 (361-437)||(10258802-10258878)
chr4 (380-451)||(52933841-52933912)
chr4 (305-451)||(21662508-21662654)
chr4 (305-451)||(21671272-21671418)
chr4 (356-457)||(22611305-22611406)
chr4 (356-448)||(19853407-19853499)
chr4 (362-446)||(29120276-29120360)
chr4 (356-448)||(53811150-53811242)
chr4 (342-445)||(45418620-45418723)
chr4 (382-448)||(6155118-6155184)
chr4 (378-448)||(36161855-36161925)
chr4 (382-448)||(37465630-37465696)
chr4 (383-448)||(18935931-18935996)
chr4 (356-457)||(43510318-43510419)
chr4 (395-451)||(9714071-9714127)
chr4 (377-449)||(22305515-22305587)
chr4 (356-444)||(36204278-36204366)
chr4 (305-448)||(10496406-10496549)
chr4 (342-449)||(54021968-54022074)
chr4 (361-448)||(56040541-56040628)
chr4 (356-457)||(32766636-32766737)
chr4 (378-447)||(51888107-51888176)
chr4 (404-448)||(9178523-9178567)
chr4 (302-426)||(22038719-22038843)
chr4 (393-449)||(42032423-42032479)
chr4 (404-448)||(48257527-48257571)
chr4 (305-457)||(53444189-53444341)
chr4 (356-443)||(26633571-26633658)
chr4 (393-448)||(43853602-43853657)
chr4 (302-448)||(2069476-2069621)
chr4 (393-447)||(7008885-7008939)
chr4 (155-237)||(51682012-51682094)
chr4 (155-237)||(51682394-51682475)
chr4 (356-457)||(13634237-13634338)
chr4 (395-448)||(24098963-24099015)
chr4 (395-448)||(35348468-35348521)
chr4 (404-448)||(11299905-11299949)
chr4 (356-448)||(17949219-17949311)
chr4 (356-448)||(17953071-17953163)
chr4 (404-448)||(22806706-22806750)
chr4 (356-448)||(33921176-33921268)
chr4 (393-457)||(44596819-44596883)
chr4 (393-437)||(55228137-55228181)
chr4 (381-448)||(36184678-36184745)
chr4 (383-448)||(1621406-1621469)
chr4 (302-408)||(9643456-9643562)
chr4 (302-443)||(12199593-12199734)
chr4 (399-448)||(21554685-21554734)
chr4 (404-436)||(4142659-4142691)
chr4 (404-448)||(37030431-37030475)
chr4 (413-449)||(47417841-47417877)
[»] chr5 (41 HSPs)
chr5 (305-457)||(28540792-28540944)
chr5 (302-448)||(8088107-8088253)
chr5 (305-448)||(14211277-14211420)
chr5 (305-448)||(2979201-2979344)
chr5 (317-447)||(19103363-19103493)
chr5 (356-457)||(24229670-24229771)
chr5 (321-436)||(7930243-7930358)
chr5 (305-448)||(14726356-14726499)
chr5 (306-448)||(39567321-39567463)
chr5 (356-457)||(13007330-13007431)
chr5 (395-451)||(10722901-10722957)
chr5 (356-448)||(38597898-38597990)
chr5 (305-448)||(31391648-31391791)
chr5 (342-447)||(1409585-1409690)
chr5 (404-457)||(26825579-26825632)
chr5 (170-239)||(34607113-34607182)
chr5 (356-448)||(9113620-9113712)
chr5 (320-444)||(35920895-35921019)
chr5 (325-447)||(14082292-14082414)
chr5 (395-448)||(11976830-11976883)
chr5 (404-448)||(25980306-25980350)
chr5 (356-448)||(34945494-34945586)
chr5 (395-447)||(41630642-41630694)
chr5 (393-448)||(8096393-8096448)
chr5 (321-448)||(13421999-13422126)
chr5 (305-448)||(35850849-35850992)
chr5 (362-436)||(26878015-26878089)
chr5 (155-237)||(36258279-36258361)
chr5 (400-448)||(6012033-6012081)
chr5 (342-457)||(6216985-6217101)
chr5 (361-448)||(10332442-10332530)
chr5 (408-447)||(11192532-11192571)
chr5 (342-448)||(15571573-15571680)
chr5 (356-449)||(26578362-26578457)
chr5 (390-444)||(11867784-11867838)
chr5 (155-237)||(30574956-30575038)
chr5 (395-449)||(37986007-37986061)
chr5 (395-457)||(38007498-38007559)
chr5 (382-447)||(8514548-8514613)
chr5 (391-448)||(16758676-16758732)
chr5 (381-450)||(31078312-31078381)
[»] chr2 (56 HSPs)
chr2 (302-457)||(17249034-17249189)
chr2 (302-448)||(32448512-32448661)
chr2 (305-448)||(10237112-10237255)
chr2 (302-448)||(10929723-10929869)
chr2 (302-448)||(12647008-12647151)
chr2 (302-444)||(29574528-29574670)
chr2 (302-448)||(37416768-37416914)
chr2 (356-448)||(1421788-1421880)
chr2 (305-457)||(3309006-3309158)
chr2 (344-448)||(4904041-4904145)
chr2 (356-448)||(7646590-7646682)
chr2 (342-446)||(29279468-29279572)
chr2 (307-447)||(41694684-41694824)
chr2 (361-448)||(37994401-37994488)
chr2 (356-457)||(4778865-4778966)
chr2 (395-448)||(25508964-25509017)
chr2 (356-448)||(33585631-33585723)
chr2 (305-448)||(23933515-23933658)
chr2 (321-448)||(37876502-37876629)
chr2 (305-447)||(30399926-30400074)
chr2 (404-448)||(4100496-4100540)
chr2 (404-448)||(9169154-9169198)
chr2 (356-448)||(31788568-31788660)
chr2 (384-448)||(36692014-36692078)
chr2 (342-457)||(7677760-7677875)
chr2 (372-443)||(19595804-19595875)
chr2 (388-451)||(19597984-19598046)
chr2 (404-447)||(38445326-38445369)
chr2 (342-448)||(11985129-11985235)
chr2 (302-448)||(12554077-12554223)
chr2 (305-451)||(19028807-19028953)
chr2 (393-451)||(28533847-28533905)
chr2 (383-448)||(6358777-6358842)
chr2 (395-448)||(18763619-18763672)
chr2 (356-432)||(31128692-31128768)
chr2 (342-457)||(5427756-5427871)
chr2 (393-447)||(14955678-14955732)
chr2 (383-436)||(14423464-14423517)
chr2 (395-448)||(18107646-18107699)
chr2 (395-448)||(43397014-43397067)
chr2 (412-448)||(19062243-19062279)
chr2 (404-448)||(27097303-27097347)
chr2 (404-448)||(33760089-33760133)
chr2 (305-448)||(1415618-1415761)
chr2 (305-448)||(12677347-12677489)
chr2 (399-438)||(17994636-17994675)
chr2 (383-430)||(31210521-31210568)
chr2 (399-442)||(33140582-33140625)
chr2 (404-447)||(41327899-41327942)
chr2 (381-444)||(42577245-42577308)
chr2 (342-447)||(29173614-29173722)
chr2 (398-448)||(34128580-34128630)
chr2 (411-457)||(35220495-35220541)
chr2 (404-436)||(4264632-4264664)
chr2 (413-449)||(21570282-21570318)
chr2 (321-457)||(33923782-33923918)
[»] scaffold0347 (1 HSPs)
scaffold0347 (319-427)||(6095-6203)
[»] scaffold0127 (1 HSPs)
scaffold0127 (362-457)||(15600-15695)
[»] scaffold0050 (1 HSPs)
scaffold0050 (321-451)||(65934-66064)
[»] scaffold0884 (1 HSPs)
scaffold0884 (383-448)||(1868-1933)
[»] scaffold0088 (1 HSPs)
scaffold0088 (356-457)||(50878-50979)
[»] scaffold0888 (1 HSPs)
scaffold0888 (305-444)||(1577-1716)
[»] scaffold0017 (1 HSPs)
scaffold0017 (356-451)||(32639-32734)
[»] scaffold0049 (1 HSPs)
scaffold0049 (342-448)||(71195-71301)
[»] scaffold0026 (1 HSPs)
scaffold0026 (404-457)||(71756-71809)
[»] scaffold0445 (1 HSPs)
scaffold0445 (384-448)||(1474-1538)
[»] scaffold0121 (1 HSPs)
scaffold0121 (346-433)||(31184-31271)
[»] scaffold0262 (1 HSPs)
scaffold0262 (342-437)||(1725-1820)
[»] scaffold0603 (1 HSPs)
scaffold0603 (404-448)||(7865-7909)
[»] scaffold0039 (1 HSPs)
scaffold0039 (356-448)||(93209-93301)
[»] scaffold0634 (1 HSPs)
scaffold0634 (342-457)||(8600-8715)
[»] scaffold0128 (1 HSPs)
scaffold0128 (393-448)||(36964-37019)
[»] scaffold0064 (1 HSPs)
scaffold0064 (393-436)||(18989-19032)
[»] scaffold0021 (1 HSPs)
scaffold0021 (356-427)||(4274-4345)
[»] scaffold0517 (1 HSPs)
scaffold0517 (161-239)||(4682-4760)
[»] scaffold0136 (1 HSPs)
scaffold0136 (404-457)||(9928-9981)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 258 - 447
Target Start/End: Original strand, 9173751 - 9173940
Alignment:
Q  258 ccactaacacgctgttttaacacatccaataacaatcgattatgtcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatc 357  Q
    ||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9173751 ccactaacacgctcttttaacacatccaataacaatccaccatgtcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatc 9173850  T
Q  358 aatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9173851 aatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 9173940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 305 - 457
Target Start/End: Complemental strand, 21289852 - 21289700
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  |||||||||  || |||| |||||||| |  |||| ||| ||||| |||| |||||||||| |    
T  21289852 tattgaaagatcagcttcagacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatggatattctggtaatttagatttca 21289753  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  21289752 tcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 21289700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 628964 - 628818
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||||||||||||||||||||| ||  ||||||||||   ||||| |||| ||| || |||| | || |||| |||| |||||||||    
T  628964 tcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgtagatccagaagcaagagtattctggtgatttagatt 628865  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
      |||||||||||||||||||||||||||||||||  ||||||||||    
T  628864 atatcatattatttgtaggcattttgccgttgtattctattaacttg 628818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 305 - 451
Target Start/End: Original strand, 8914762 - 8914908
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    ||||||||||  |||||||| |||||||| || ||  |||||||||| |  |||| |||||||| || |||| |||  |||| |||| |||||||||| |    
T  8914762 tattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattctggtgatttagatttca 8914861  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  8914862 tcatattatttgtaggcattttgccgttgtatgctattaacttgagt 8914908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 50194376 - 50194230
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||||||||||||||||||||||||| ||  | ||||||||    | || |||||||| ||||||| |||| |||| |||| ||||||||     
T  50194376 tcatattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagtattctggtgatttagata 50194277  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||| |||||||||||||||||||| |||| ||||||||||    
T  50194276 tcatcatattttttgtaggcattttgccgttatatgctattaacttg 50194230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 51303681 - 51303538
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||| | |||||||| || ||  |||||||||| |  |||| |||||||| || |||| |||  |||| |||| |||||||||| |    
T  51303681 tattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttca 51303582  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  51303581 tcatattatttgtaggcattttgccgttgtatgctattaacttg 51303538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 53807899 - 53807753
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| || |||||||||||||||||| ||  ||||||||||    |||| |||||| | || |||| | || |||| |||| |||||||||    
T  53807899 tcatattgaaagatcaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagatt 53807800  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
      |||||||||||||||||||||||||||||||||| ||||||||||    
T  53807799 atatcatattatttgtaggcattttgccgttgtatgctattaacttg 53807753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 51923777 - 51923920
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| ||||| || || ||  ||||||||||    |||| |||||||| || |||| |||  |||| |||| |||||||||| |    
T  51923777 tattgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttca 51923876  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  51923877 tcatattatttgtaggcattttgccgttgtatgctattaacttg 51923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 9173624 - 9173709
Alignment:
Q  153 aatggcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctcat 238  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||||||| | |||  |||||||||||||||||||||||||    
T  9173624 aatggcacatgactaacttaagtgatgttttaatctcgtccctttattttaatttgatggatgtaattcattctcaccattctcat 9173709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 7546665 - 7546817
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||| ||||| |||||||| || ||  |||||||||| |  |||| ||||| || ||  ||| |||  |||| |||| |||||||||| |    
T  7546665 tattgaaagatcagtttcagacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggtattctggtgatttagatttca 7546764  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  7546765 tcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 7546817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 451
Target Start/End: Original strand, 35175453 - 35175600
Alignment:
Q  304 atattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttg 403  Q
    ||||||||||| |||||||||||||||||| || ||  ||||||||||   ||||| |||||||| ||| ||  |||| |||| || | ||||| ||||     
T  35175453 atattgaaagatcagcttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccgaaaacatgagtattctgatgatttatatttc 35175552  T
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    |||||||| ||||||||||||||| | ||||||| |||||||||||||    
T  35175553 atcatattgtttgtaggcattttgtcattgtatgctattaacttgagt 35175600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 14859537 - 14859683
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| |||||||| ||||||||| || ||  ||||||||||    |||| |||||||| || |||| |||  ||||||||| |||||||||    
T  14859537 tcatattgaaagatcagcttcaatcaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattttggtaatttagatt 14859636  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | ||| ||||||| || ||||||||| ||||||||| ||||||||||    
T  14859637 ttatcgtattattggttggcattttgtcgttgtatgctattaacttg 14859683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 448
Target Start/End: Complemental strand, 45568426 - 45568340
Alignment:
Q  362 ttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||| ||||||| ||| |||||| ||| |||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  45568426 ttgcagatccggaagcatggatatttgggtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 45568340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 29922104 - 29922250
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| || |||||  |||||||| || ||  ||||||||||    |||| |||||||| || |||  |||| | || |||| |||||||||    
T  29922104 tcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagatt 29922203  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||| ||||||||||||||||||||||||| ||||||||||    
T  29922204 ttatcatattgtttgtaggcattttgccgttgtatgctattaacttg 29922250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 29971257 - 29971403
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| || |||||  |||||||| || ||  ||||||||||    |||| |||||||| || |||  |||| | || |||| |||||||||    
T  29971257 tcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagatt 29971356  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||| ||||||||||||||||||||||||| ||||||||||    
T  29971357 ttatcatattgtttgtaggcattttgccgttgtatgctattaacttg 29971403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 21533796 - 21533695
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  21533796 tcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctg 21533697  T
Q  456 tg 457  Q
    ||    
T  21533696 tg 21533695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 23799858 - 23799805
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23799858 ttagattttatcatattatttgtaggcattttgccgttgtatgttattaacttg 23799805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 27706181 - 27706121
Alignment:
Q  388 tggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  27706181 tggttatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttg 27706121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 449
Target Start/End: Complemental strand, 12050649 - 12050542
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| || |||| |||||||| ||||||  |||| ||||| ||  | |||| ||| ||||||||||||||| |||||||| |||||||||||||    
T  12050649 caatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagcattttgtcgttgtatgttat 12050550  T
Q  442 taacttga 449  Q
    ||||||||    
T  12050549 taacttga 12050542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 19339226 - 19339368
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || ||| ||||||| ||| || ||  |||||||||  || ||||||||||||| || |||| |||  ||||| | | | |||||||| |    
T  19339226 tattgaaagatcaactttagtcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatttcg-tgacttagatttta 19339324  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  19339325 tcatattatctgtaggcattttgtcgttgtatgttattaacttg 19339368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 42460836 - 42460951
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| ||||||||  | |||| ||||| ||| |||| |||||||||| ||||||||||||||||||||||||  |||||||| |||    
T  42460836 caatgatttgggcgtcaacgttgcagatacagaagcatgaacattctggtgatttagattttatcatattatttgtaggcattttgttgttgtatgctat 42460935  T
Q  442 taacttgagttctgtg 457  Q
    ||||||| || |||||    
T  42460936 taacttgggtactgtg 42460951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 9172418 - 9172337
Alignment:
Q  150 ggaaatggcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctcatag 240  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||         ||||| |||||||||||||||||||||||||||    
T  9172418 ggaaatggcacatgactaacttaagtgatgttttaatctcatcccttta---------tatgactgtaattcattctcaccattctcatag 9172337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 38860073 - 38860007
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||| | |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  38860073 atattttggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 38860007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 355 - 448
Target Start/End: Original strand, 4711582 - 4711675
Alignment:
Q  355 atcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| |||||||| ||||||| |||  ||||| ||| | |||  ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  4711582 atcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 4711675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 21431714 - 21431815
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||  ||| |||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  21431714 tcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgctg 21431813  T
Q  456 tg 457  Q
    ||    
T  21431814 tg 21431815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 43488577 - 43488476
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| |||| ||||| ||| |||||| ||| |||||||||||| ||||| ||||||||||||||| |||||| ||| || |||    
T  43488577 tcaacgttgcagatccggaagcatgagtatttcggtgatttaggttttatcatattatttttaggctttttgccgttgtatgctattaatttgggtgctg 43488478  T
Q  456 tg 457  Q
    ||    
T  43488477 tg 43488476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 448
Target Start/End: Complemental strand, 12946937 - 12946862
Alignment:
Q  373 gaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||| |||| |||| |||||||||| |||||||| ||||||||||||||||| || |||| ||||||||||    
T  12946937 gaagtatgagtattctggtgatttagatttcatcatattttttgtaggcattttgcccttatatgctattaacttg 12946862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 16235476 - 16235619
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    ||||||||||  || || || |||||||| || ||  |||||||||| |  |||| |||||||| |  |||| |||  |||| |||| |||||||||| |    
T  16235476 tattgaaagattagttttagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattctggtgatttagatttca 16235575  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||    
T  16235576 tcatattacttgtaggcattttgtcgttgtatgctattaacttg 16235619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 19619853 - 19619904
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaact 446  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19619853 ttagattttatcatattatttgtaggcattttgccgttgtatgctattaact 19619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 457
Target Start/End: Original strand, 21313159 - 21313238
Alignment:
Q  378 atgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||| ||||| ||| | |||||||| |||||||||||||||| ||||||||||||||||| |||||||||| || |||||    
T  21313159 atgagtatttcggtgacttagattttatcatattatttgtagccattttgccgttgtatgctattaacttgggtgctgtg 21313238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 448
Target Start/End: Original strand, 33579922 - 33580073
Alignment:
Q  297 ttatgtcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttattt 396  Q
    |||| ||||||||||||| |  | ||||||||| ||| || ||  |||||||||| |  |||| |||| ||| ||||||| | |   |||| ||| ||||    
T  33579922 ttatttcatattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgattt 33580021  T
Q  397 agatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    || ||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  33580022 aggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 33580073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 448
Target Start/End: Complemental strand, 20987708 - 20987650
Alignment:
Q  390 gttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  20987708 gttacttagattttatcatattatttgtaggcattttgcagttgtatgctattaacttg 20987650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 451
Target Start/End: Complemental strand, 26739307 - 26739249
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  26739307 atttagattttatcatattatttgtaagcattttggcgttgtatgctattaacttgagt 26739249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 448
Target Start/End: Original strand, 27856292 - 27856358
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||    
T  27856292 atattctggtgatttagattttatcatattatttgtaggcatttttccgttgcatgctattaacttg 27856358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 448
Target Start/End: Original strand, 40487432 - 40487518
Alignment:
Q  362 ttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||| ||||||| ||   ||||| ||| | |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  40487432 ttgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttatatgttattaacttg 40487518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 6954683 - 6954582
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||||| |||||| ||||||| |||  ||||| ||| | |||  ||| |||| ||||||||||||||||||||||||||||| |||||||||| || |||    
T  6954683 tcaatgctgcagatccggaagcatgggtatttcggtgacttatgttttatcaaattatttgtaggcattttgccgttgtatgctattaacttgggtgctg 6954584  T
Q  456 tg 457  Q
    ||    
T  6954583 tg 6954582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 9998616 - 9998669
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  9998616 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 9998669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 10108385 - 10108438
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  10108385 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 10108438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 10229625 - 10229678
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  10229625 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 10229678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 10233219 - 10233272
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  10233219 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 10233272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 451
Target Start/End: Complemental strand, 46304501 - 46304412
Alignment:
Q  362 ttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||||| ||||||| |||  ||||| ||| | |||| ||| |||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  46304501 ttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatatgtaggcatgttgccgttgtatgctattaacttgagt 46304412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 457
Target Start/End: Complemental strand, 9797516 - 9797420
Alignment:
Q  361 gttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||| ||||||| |||  |||||  || |||||  ||| |||||||||||||||||||||||| ||||||||| |||||||||| || |||||    
T  9797516 gttgcagatccggaagcatgggtatttaagtgatttatgttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtg 9797420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 48650673 - 48650629
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  48650673 atcatattatttgtaggcattttgccgttgtatgctattaacttg 48650629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 52923104 - 52923012
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  52923104 tcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttaccgttgtatgctattaacttg 52923012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 447
Target Start/End: Original strand, 43017037 - 43017080
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  43017037 atcatattatttgtaggcattttgccgttgtatgctattaactt 43017080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 445
Target Start/End: Original strand, 54149078 - 54149181
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| |||||||| ||||||| |||  ||||| ||| | || ||||| ||||||||||||||||||||| || ||||||||| |||    
T  54149078 caatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgacttggattttatcatattatttgtaggcattatgtcgttgtatgctat 54149177  T
Q  442 taac 445  Q
    ||||    
T  54149178 taac 54149181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 7792137 - 7792083
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||| |||||||||||||||||||||||||| ||||| | |||||||||    
T  7792137 atttagattttatcatattatttgtaggcattttgccattgtaagctattaactt 7792083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 451
Target Start/End: Original strand, 47896218 - 47896347
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  | ||||||||| | ||||||| |||||||||| | | | |||| ||| ||| ||||||||||||     
T  47896218 tcagtcaattacaaattcaaccaatgatttgggcgtaaatgttgcatatccggaagcatgaatatttcgataacttaggttttatcttattatttgtag- 47896316  T
Q  421 cattttgccgttgtatgttattaacttgagt 451  Q
    ||||||| ||||||||| |||||||||||||    
T  47896317 cattttgtcgttgtatgctattaacttgagt 47896347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 38545939 - 38545992
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  38545939 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 38545992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 44805157 - 44805222
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||| |||||||||| |||||||| ||||||||||||||| | ||||||| ||||||||||    
T  44805157 tattatggtgatttagattttatcatattgtttgtaggcattttgtcattgtatgctattaacttg 44805222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 9172471 - 9172435
Alignment:
Q  17 aagaggacggccggaaatgagagtcgccggtggaggg 53  Q
    |||||||||||||||||||||||||||||||||||||    
T  9172471 aagaggacggccggaaatgagagtcgccggtggaggg 9172435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 44959912 - 44959868
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  44959912 atcatattatttgtaggcattttgccattgtatgctattaacttg 44959868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 46220801 - 46220845
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatg 437  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||    
T  46220801 atttagattttatcatattatttgtaggcattttaccgttgtatg 46220845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 3085251 - 3085200
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    ||||||| || |||||||||||||||||||||||||||||||| | ||||||    
T  3085251 atttagaattcatcatattatttgtaggcattttgccgttgtaggctattaa 3085200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 447
Target Start/End: Complemental strand, 7448901 - 7448810
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| |||||| | ||||||| |||| ||||| ||| | |||  ||| |||||||||||||||| |||||||||| |||||| |||||||||    
T  7448901 tcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagacattttgccgctgtatgctattaactt 7448810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 447
Target Start/End: Complemental strand, 7457043 - 7456952
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| |||||| | ||||||| |||| ||||| ||| | |||  ||| |||||||||||||||| |||||||||| |||||| |||||||||    
T  7457043 tcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagacattttgccgctgtatgctattaactt 7456952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 437
Target Start/End: Original strand, 40556817 - 40556884
Alignment:
Q  370 ccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatg 437  Q
    ||||||| |||  ||||||||| | |||  ||| ||||||||||||||||||||||||||||||||||    
T  40556817 ccggaagcatgtgtattttggtgacttaagttttatcatattatttgtaggcattttgccgttgtatg 40556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 4821854 - 4821999
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| |||||| ||||||||||| || ||  | ||||||||   | ||| ||| || | ||||| | |||  |||| |||| ||||| |||    
T  4821854 tcatattgaaagatcagcttgagtcaatcacatattcaatccatgatttggacaccaacgttacaaatccggaggcatgggtattctggtgattta-att 4821952  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||| |||||||||||||||| ||| |||| ||||||||||    
T  4821953 tcatcatattttttgtaggcattttgctgttatatgctattaacttg 4821999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 53099930 - 53099982
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||||||||||    
T  53099930 ttagattttagcatattatttgtag-cattttgtcgttgtatgttattaacttg 53099982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 26275763 - 26275715
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| |||||||||||||||||||||||| | ||||||| |||||||||    
T  26275763 attttatcatattatttgtaggcattttgtcattgtatgctattaactt 26275715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 53508364 - 53508404
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttg 433  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  53508364 atttagattttatcatattatttgtaggcattttgtcgttg 53508404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 12149785 - 12149670
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| |||||||| | ||||| |||  ||||| ||| | |||  ||| ||||||||| | |||||||||||||||||||||| |||    
T  12149785 caatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatgttttatcatattaatcgtaggcattttgccgttgtatgctat 12149686  T
Q  442 taacttgagttctgtg 457  Q
    ||| ||| || |||||    
T  12149685 taagttgggtactgtg 12149670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 52115971 - 52115916
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||  |||||||||||||||| |||||||  ||| |||||||||||||||    
T  52115971 atttagattgtatcatattatttgtagtcattttgttgttatatgttattaacttg 52115916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 13458985 - 13459023
Alignment:
Q  409 attatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  13458985 attatttgtaggcatttttccgttgtatgatattaactt 13459023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 18011121 - 18011219
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttct 454  Q
    |||| |||||||| || |||| ||||||||||  || | |||||| | ||||||||||||||||| || |||| |||||||| || ||| ||| |||||    
T  18011121 tcaacgttgcagatccagaagcatgaatatttcagtgacttagatataatcatattatttgtaggtatcttgcggttgtatgctactaatttgggttct 18011219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Original strand, 32246550 - 32246596
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgc 428  Q
    ||||| |||| |||||||||| ||||||||||||||||||| |||||    
T  32246550 atattctggtgatttagattttatcatattatttgtaggcaatttgc 32246596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 447
Target Start/End: Complemental strand, 47042086 - 47041944
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| |||| ||||||| | ||| || ||  ||||| |||| |  |||| |||| ||| ||||||| |||   |||||||| | |||| ||| |    
T  47042086 tattgaaagatcagcatcagtcagttacaaattcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttca 47041987  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    ||||||||||||||||| ||||  |||| |||| |||||||||    
T  47041986 tcatattatttgtaggcgttttatcgttttatgctattaactt 47041944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 20464970 - 20464865
Alignment:
Q  343 aatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttatt 442  Q
    ||||||||| |  |||||||||||||   | ||| |||| ||||| ||| | ||| |||| ||||||||||||||  |||||||| ||| ||||| ||||    
T  20464970 aatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttcggtgacttaaattttatcatattatttgtgtgcattttgtcgtcgtatgctatt 20464871  T
Q  443 aacttg 448  Q
    ||||||    
T  20464870 aacttg 20464865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 32701643 - 32701684
Alignment:
Q  407 atattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||    
T  32701643 atattatctgtaggcattttgccgttgtatgctatgaacttg 32701684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 51487218 - 51487267
Alignment:
Q  378 atgaatattttggttatttagatttgatcatattatttgtaggcattttg 427  Q
    |||| |||| |||| |||||||||| |||||||||||||||| |||||||    
T  51487218 atgagtattctggtgatttagattttatcatattatttgtagacattttg 51487267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 23691618 - 23691694
Alignment:
Q  160 catgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctc 236  Q
    |||||||||||||| |  |||||| ||||||||||||  ||||||||| |||  || |||||||||| || ||||||    
T  23691618 catgactaacttaaattgtgttttaatcttatcccttgtttttaatctaatggctgcaattcattcttacgattctc 23691694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 23710057 - 23710133
Alignment:
Q  160 catgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctc 236  Q
    |||||||||||||| |  |||||| ||||||||||||  ||||||||| |||  || |||||||||| || ||||||    
T  23710057 catgactaacttaaattgtgttttaatcttatcccttgtttttaatctaatggctgcaattcattcttacgattctc 23710133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 23728513 - 23728589
Alignment:
Q  160 catgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctc 236  Q
    |||||||||||||| |  |||||| ||||||||||||  ||||||||| |||  || |||||||||| || ||||||    
T  23728513 catgactaacttaaattgtgttttaatcttatcccttgtttttaatctaatggctgcaattcattcttacgattctc 23728589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 23746969 - 23747045
Alignment:
Q  160 catgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctc 236  Q
    |||||||||||||| |  |||||| ||||||||||||  ||||||||| |||  || |||||||||| || ||||||    
T  23746969 catgactaacttaaattgtgttttaatcttatcccttgtttttaatctaatggctgcaattcattcttacgattctc 23747045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 38142663 - 38142719
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||||||| | |||||||||||||||||||||||   |||||||  |||||||||||    
T  38142663 atttagatcttatcatattatttgtaggcattttattgttgtatactattaacttga 38142719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 24583001 - 24583147
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||||||||||||||||||||| ||  ||||||||||    |||| |||||||| || |||| | ||||||| |||| |||||||||    
T  24583001 tcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagaatattctggtgatttagatt 24583100  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
      |||||||||||||||||||||||||||||||||| ||||||||||    
T  24583101 atatcatattatttgtaggcattttgccgttgtatgatattaacttg 24583147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 47132954 - 47133100
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||||||||||||||||||||| ||  | ||||||||    ||||  ||||||| ||||||| |||| |||| |||| |||||||||    
T  47132954 tcatattgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatt 47133053  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||| |||||||||||||||||||| |||| ||||||||||    
T  47133054 tcatcatattttttgtaggcattttgccgttatatgctattaacttg 47133100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 302 - 437
Target Start/End: Original strand, 44915690 - 44915825
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| || | ||||||||| ||| || ||  |||||||||| |  ||||||||||||| ||||||| |||| ||||| ||||  |||||||    
T  44915690 tcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcggtttcttagatt 44915789  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatg 437  Q
    | ||||||||||||||||||||||||||||||||||    
T  44915790 ttatcatattatttgtaggcattttgccgttgtatg 44915825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 19060960 - 19061106
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    |||||||||||||  |||||||||||||||||| | ||  |||| |||||   |||||||||| ||| || |||| | || |||| |||| |||||||||    
T  19060960 tcatattgaaagattagcttcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttagatt 19061059  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
      |||||||||||||||||||||||||||||||||| ||||||||||    
T  19061060 atatcatattatttgtaggcattttgccgttgtatgctattaacttg 19061106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 457
Target Start/End: Original strand, 44543323 - 44543478
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| |||||| |||||||||||||| ||  ||||||||||    |||| |||||||| || |||| | || |||| | || |||||||||    
T  44543323 tcatattgaaagatcagctttagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgatttagatt 44543422  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
      ||||||||||||||||||||||||||||| |||| |||||||||| || |||||    
T  44543423 atatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtg 44543478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 48750239 - 48750382
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| ||  |  |||||||||| |  |||| |||||||| ||  ||| |||  |||| |||| |||||||||| |    
T  48750239 tattgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggtattctggtgatttagatttca 48750338  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  48750339 tcatattatttgtaggcattttgccgttgtatgctattaacttg 48750382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 16262912 - 16263061
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||| | || || |||||||||||| || ||  |||||||||||| ||||| |||||||| ||||||| |||| |||| || | |||||||||    
T  16262912 tcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgcatcaacgttgcagatccggaagcatgagtattctgatgatttagatt 16263011  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    | ||||| ||||| ||| ||||||||||||| |||| ||||||| |||||    
T  16263012 ttatcatgttattcgtatgcattttgccgttttatgctattaacatgagt 16263061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 321 - 448
Target Start/End: Original strand, 14872709 - 14872836
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  |||| |||||||| ||||||| |||  ||||||||| | |||| ||| |||||||||||||||||    
T  14872709 tcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttaggttttatcatattatttgtagg 14872808  T
Q  421 cattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||| ||||||||||    
T  14872809 cattttgccgttgtatgctattaacttg 14872836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 4413219 - 4413320
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| |||||||||| ||| | |||| ||| ||||||||||||||||||||||||| |||||||| |||||| |||||| |||    
T  4413219 tcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaggcattttgctgttgtatgctattaaattgagtgctg 4413318  T
Q  456 tg 457  Q
    ||    
T  4413319 tg 4413320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 21947605 - 21947513
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||||||||| ||| | |||  ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  21947605 tcaacgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtattttattaacttg 21947513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 36775748 - 36775605
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | ||||||| |||||||| || ||  |||||||||| |  |||| |||||||| || |||  |||  |||   ||| |||||||||| |    
T  36775748 tattgaaagatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtatcccggtgatttagatttca 36775649  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  36775648 tcatattatttgtaggcattttgccgttgtatgctattaacttg 36775605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 29406913 - 29406831
Alignment:
Q  157 gcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctcata 239  Q
    |||||||||| | |||||||||||||| |||| |||||||||||||||||| |||  ||||||||||||||| ||||||||||    
T  29406913 gcacatgactcatttaagtgatgttttaatctcatccctttattttaatctgatggctgtaattcattctcatcattctcata 29406831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 34413052 - 34412987
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  34413052 tattctggtgatttagatttcatcatattatttgtaggcattttgcggttgtatgttattaacttg 34412987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 24583275 - 24583343
Alignment:
Q  380 gaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||| |||| |||||||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  24583275 gaatattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttg 24583343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 448
Target Start/End: Original strand, 3228339 - 3228466
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  |||| |||||||| ||| ||  ||| |||||| | | |||||| ||| |||||||||||||||||    
T  3228339 tcagtcaattacaaatacaatcaatgatttgggcgtcaacgttgcagatccgaaatcatggatatttcgatgatttaggttttatcatattatttgtagg 3228438  T
Q  421 cattttgccgttgtatgttattaacttg 448  Q
    |||||||||||| |||||||||||||||    
T  3228439 cattttgccgttatatgttattaacttg 3228466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 444
Target Start/End: Original strand, 49626964 - 49627106
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| |||||||||||||||||| || ||  ||||||||||    |||| ||||||||  | |||| | || |||| || | |||||||||    
T  49626964 tcatattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttggacgtcaacgttgcagatgcagaagcaagagtattctgatgatttagatt 49627063  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
      ||||| |||||||||| ||||||||||||||||| ||||||    
T  49627064 atatcatcttatttgtagacattttgccgttgtatgctattaa 49627106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 445
Target Start/End: Original strand, 15492378 - 15492481
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  ||| ||||||||| || | || ||| ||||| |||| |||||||||| ||||||||||||||| ||||||| |||||||||| |||    
T  15492378 caatgatttgggcgtcagtgttgcagatcctggagcatggatattatggtgatttagattttatcatattatttgtatgcattttaccgttgtatgctat 15492477  T
Q  442 taac 445  Q
    ||||    
T  15492478 taac 15492481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 37720187 - 37720044
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || |||||| |||||||| || ||   ||||||||| |  |||| |||||||| ||  ||| |||  |||| ||||||||||||||| |    
T  37720187 tattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagcatgggtattctggttatttagatttta 37720088  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||| | || | ||| ||||||||||    
T  37720087 tcatattatttgtaggcatttttctgtggaatgctattaacttg 37720044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 448
Target Start/End: Original strand, 31317827 - 31317933
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| ||| |||||||||||| ||| |||||| ||| ||||||| || |||||||||||||||||||||||  ||||| ||  |||    
T  31317827 caatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaatttatcatattatttgtaggcattttatcgttgcatcctat 31317926  T
Q  442 taacttg 448  Q
    |||||||    
T  31317927 taacttg 31317933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 448
Target Start/End: Complemental strand, 32679114 - 32679036
Alignment:
Q  370 ccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||| |||| |||| |||| |||||||||| |||||||| |||||||||||||||||||| ||||  |||||||||    
T  32679114 ccggaagcatgagtattatggtgatttagatttcatcatattttttgtaggcattttgccgttatatgccattaacttg 32679036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 14489404 - 14489469
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||| |||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||    
T  14489404 tattctggtgatttagattttatcatattatttgtaggtattttgttgttgtatgttattaacttg 14489469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 448
Target Start/End: Original strand, 25564066 - 25564195
Alignment:
Q  319 cttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgta 418  Q
    |||||||||||||||||| ||  |||||||||| |  ||||  ||||||| | ||||| |||| |||| |||| ||||| |||| || ||||| ||||||    
T  25564066 cttcagtcaatcacagattcaatcaatgatttgggcgtcaacattgcagatctggaagcatgattattctggtgatttatattttattatattgtttgta 25564165  T
Q  419 ggcattttgccgttgtatgttattaacttg 448  Q
    |  ||||||  |||||||||||||||||||    
T  25564166 gatattttgttgttgtatgttattaacttg 25564195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 7337650 - 7337558
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||| ||| |||| | ||| ||||||||||||||||||||||||| |||| ||| ||||||||||    
T  7337650 tcaacgttgcagatccggaagcatgggtatttcggtgattttggttttatcatattatttgtaggcattttgctgttgcatgctattaacttg 7337558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 457
Target Start/End: Complemental strand, 23291680 - 23291528
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||| ||| || ||  |||||||||| | ||||| |||| ||| ||||||| |||   |||| ||| | |||| ||| |    
T  23291680 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcatcaacgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 23291581  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||| ||| ||||||||||| |||| |||||||||| || |||||    
T  23291580 tcatattatttggaggtattttgccgttttatgctattaacttgggtgctgtg 23291528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 35484378 - 35484286
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||| ||| |||  ||||| ||| |||| | ||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  35484378 tcaacgttgcagatccgaaagcatgggtatttcggtgatttcggttttatcatattatttgtaagcattttgccgttgtatgctattaacttg 35484286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 448
Target Start/End: Original strand, 5983906 - 5984033
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  |||| | |||||| ||||||| |||  ||||| ||| | |||  ||| |||||||||||||||||    
T  5983906 tcagtcaattacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtagg 5984005  T
Q  421 cattttgccgttgtatgttattaacttg 448  Q
    ||||||| ||||||||| ||||||||||    
T  5984006 cattttgtcgttgtatgctattaacttg 5984033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 6217773 - 6217718
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||| ||||||||||    
T  6217773 atttagattttatcatattatttgtaggtattttaccgttgtatgctattaacttg 6217718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 7836744 - 7836682
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||| ||| ||||||||||||||||||||||||||||| |||| |||||||||| || |||||    
T  7836744 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtg 7836682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 16161970 - 16162024
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||| |||||||||||||||||||||||||||| | ||| |||||||||    
T  16161970 atttagattttatcatattatttgtaggcattttgccgtggaatgctattaactt 16162024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 16989515 - 16989577
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||| ||| ||||||||||||||||||||||||||||| |||| |||||||||| || |||||    
T  16989515 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtg 16989577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 34878226 - 34878173
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  34878226 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 34878173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 457
Target Start/End: Complemental strand, 10776483 - 10776347
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| |||||  ||||||||||    ||||  ||||||| || |||| |||| ||||| ||| | |||| ||| ||||| |||||||||||    
T  10776483 tcagtcaattacaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttaggttttatcattttatttgtagg 10776384  T
Q  421 cattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||| |||||||  |||||||||| || |||||    
T  10776383 cattttgctgttgtattctattaacttgggtgctgtg 10776347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 19596399 - 19596355
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  19596399 atcatattatttgtaggcattttgccgttttatgctattaacttg 19596355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 436
Target Start/End: Original strand, 45415663 - 45415743
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtat 436  Q
    |||| |||||||| ||||||| ||   ||||| ||| | |||| ||| |||||||||||||||||||||||||||||||||    
T  45415663 tcaacgttgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtat 45415743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 457
Target Start/End: Complemental strand, 49504597 - 49504481
Alignment:
Q  341 acaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgtta 440  Q
    |||||||||||  | |||| |||||||| ||||||| |||| | ||| ||| |||| | ||| | |||| ||||| |||||||||| |||||||||| ||    
T  49504597 acaatgatttggatgtcaacgttgcagatccggaagcatgagtgtttcggtgatttgggttttaacataatatttttaggcattttaccgttgtatgcta 49504498  T
Q  441 ttaacttgagttctgtg 457  Q
    |||||||| || |||||    
T  49504497 ttaacttgggtgctgtg 49504481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 448
Target Start/End: Original strand, 31919079 - 31919186
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttaga-tttgatcatattatttgtaggcattttgccgttgtatgtta 440  Q
    |||||||||| | ||||| |||||||| || |||| ||||| ||||  || | ||||  ||| |||||||||||||||| ||||||| ||||||||| ||    
T  31919079 caatgatttgagcatcaacgttgcagatccagaagcatgaaaatttcagtgacttagggttttatcatattatttgtagacattttgtcgttgtatgcta 31919178  T
Q  441 ttaacttg 448  Q
    ||||||||    
T  31919179 ttaacttg 31919186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 13144853 - 13144707
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    |||||||||||||||  ||| | ||||| ||| || ||  ||||||||||    ||||| ||||||| | | ||| |||| |||||  || | |||||||    
T  13144853 tcatattgaaagaccgactttaatcaattacaaattcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgacttagatt 13144754  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||| ||||||||||||||||||| || |||| ||||||||||    
T  13144753 ttatcataatatttgtaggcattttgccattttatgctattaacttg 13144707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 448
Target Start/End: Original strand, 31984252 - 31984358
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| |||||| | ||||||| |||  ||||| ||| | |||| ||| |||||||||||| || |||||||| ||||||||| |||    
T  31984252 caatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttaggttttatcatattatttttaagcattttgtcgttgtatgctat 31984351  T
Q  442 taacttg 448  Q
    |||||||    
T  31984352 taacttg 31984358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 447
Target Start/End: Original strand, 41740478 - 41740571
Alignment:
Q  356 tcaatgttgcagacccggaag--tatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    ||||||||||| |||||||||  |||  |||||||| | | ||| |||| |||||||||||| || ||||| | ||||||||||||||||||||    
T  41740478 tcaatgttgcatacccggaagcatatatatattttgatgacttatattttatcatattatttataagcattcttccgttgtatgttattaactt 41740571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 51163897 - 51163823
Alignment:
Q  161 atgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattct 235  Q
    ||||||||||||| |  |||||| || |||||||||  ||||||||| |||| || |||||||||||||||||||    
T  51163897 atgactaacttaaattgtgttttaattttatcccttatttttaatctaatgactgcaattcattctcaccattct 51163823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 51373819 - 51373753
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||| ||| | ||| |||| |||||||||||||||||||||||| ||| ||||| ||||||||||    
T  51373819 atatttcggtgacttatattttatcatattatttgtaggcattttgtcgtcgtatgctattaacttg 51373753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 11462421 - 11462368
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||| || |||||    
T  11462421 atcatattatttgtaggaattttgtcgttgtatgctattaacttgggtgctgtg 11462368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 50377467 - 50377520
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| |||||||| | |||||||||||| |||| ||||||||||||||||    
T  50377467 ttagattttatcatattgtctgtaggcatttttccgtcgtatgttattaacttg 50377520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 32395151 - 32395195
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||    
T  32395151 atcatattatttataggcattttgccgctgtatgctattaacttg 32395195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 449
Target Start/End: Original strand, 5856064 - 5856107
Alignment:
Q  406 catattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    ||||||||||||||  |||||||||||||||| |||||||||||    
T  5856064 catattatttgtagaaattttgccgttgtatgctattaacttga 5856107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 9341857 - 9341924
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    ||||| |||| | |||||||| ||||||||||||||||| ||||||  |||||||  |||||||||||    
T  9341857 atattctggtgacttagattttatcatattatttgtaggtattttgttgttgtatactattaacttga 9341924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 27789319 - 27789401
Alignment:
Q  155 tggcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctca 237  Q
    |||||||||| | |||||||||||||||| |||| |||| ||  ||||||||  |||  || |||| ||||||||||||||||    
T  27789319 tggcacatgagtcacttaagtgatgttttaatctaatccattgtttttaatccgatggctgcaatttattctcaccattctca 27789401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 436
Target Start/End: Complemental strand, 31692508 - 31692374
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    |||||||||||||  ||||| ||||||| ||| ||  |  |||||||||   | ||||||||| ||| ||| ||||||| |||||||||| | ||  |||    
T  31692508 tcatattgaaagattagctttagtcaataacaaatttaatcaatgatttcgatgtcaatgttgtagatccgaaagtatgcatattttggtgaattttatt 31692409  T
Q  402 tgatcatattatttgtaggcattttgccgttgtat 436  Q
    | ||||||| ||||||| |||||||| || |||||    
T  31692408 ttatcatataatttgtatgcattttgtcgatgtat 31692374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 37403394 - 37403316
Alignment:
Q  161 atgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctcata 239  Q
    ||||||||||||  |  |||||| ||||||||||||  ||||||||| |||  |  |||||||||||||||||||||||    
T  37403394 atgactaacttacattgtgttttaatcttatcccttgcttttaatctaatggctacaattcattctcaccattctcata 37403316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 4397115 - 4397164
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||||||||||||||||| |||||| |  |||||||||||||||||    
T  4397115 attttatcatattatttgtaggtattttgtcactgtatgttattaacttg 4397164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 29738603 - 29738550
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||| | ||||||| ||||||||||| |||||||||| || |||||    
T  29738603 atcatattatttattggcatttggccgttgtatgctattaacttgggtgctgtg 29738550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 34529202 - 34529271
Alignment:
Q  379 tgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| |||| ||||| |||| |||| ||||||||||||||||||   |||||||  ||||||||||    
T  34529202 tgaatattatggtgatttaaattttatcacattatttgtaggcatttttttgttgtatactattaacttg 34529271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 15431613 - 15431561
Alignment:
Q  396 tagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||| |||||||||||||||| ||||||  ||||||||| |||| |||||    
T  15431613 tagattttatcatattatttgtagacattttatcgttgtatgctattcacttg 15431561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 449
Target Start/End: Complemental strand, 30712239 - 30712195
Alignment:
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||||||||||||||||||||||  ||| |||| |||||||||||    
T  30712239 tcatattatttgtaggcattttgttgttctatgctattaacttga 30712195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 446
Target Start/End: Complemental strand, 41081673 - 41081581
Alignment:
Q  355 atcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatat-tatttgtaggcattttgccgttgtatgttattaact 446  Q
    |||||||||||||| ||||| | |||  |||| |||| ||||  |||| ||||||| | |||||||||||| ||| ||| |||||||||||||    
T  41081673 atcaatgttgcagatccggaggcatgtgtattctggtcattttaattttatcatatatttttgtaggcattatgcagttatatgttattaact 41081581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 14801879 - 14802022
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    ||||||||||  |||||||| |||||||| || ||  |||||||||| |  |||| |||||||| || |||| |||  ||||||||| |||||||||| |    
T  14801879 tattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattttggtgatttagatttca 14801978  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  14801979 tcatattatttgtaggcattttgccgttgtatgctattaacttg 14802022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 8102778 - 8102930
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  |||||||||| |  |||| |||||||| || |||  ||||||||| || | |||||||||| |    
T  8102778 tattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatattctgatgatttagatttta 8102877  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || |||||    
T  8102878 tcatattatttgtaggcattttgccgtggaatgttattaacttgggtgctgtg 8102930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 546082 - 546235
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacaga-tccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttg 403  Q
    |||||||||| ||||||||| |||||||| | | ||  |||||||||| |  |||| |||||||| || |||| |||  |||| ||||  |||||||||     
T  546082 tattgaaagatcagcttcagacaatcacaaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtggtttagatttc 546181  T
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  546182 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 546235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 12170557 - 12170672
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    ||||||||||  | |||| |||||||| ||||||| |||  ||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||| |||    
T  12170557 caatgatttggatgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggtttgatcatattatttgtaggcattttgctgttgtatgctat 12170656  T
Q  442 taacttgagttctgtg 457  Q
    ||||||| || |||||    
T  12170657 taacttgggtgctgtg 12170672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 9380075 - 9380206
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||||||  || |||||||||||  | ||  ||||||||||||| ||||||||| |||  | |||| |||  ||||||||| |||||||||| |    
T  9380075 tattgaaagaccaattttagtcaatcacatgttcaatcaatgatttgtgtgtcaatgttgtagattcagaagcatgggtattttggtgatttagatttta 9380174  T
Q  405 tcatattatttgtaggcattttgccgttgtat 436  Q
    |||||||||||||| |||||||| ||||||||    
T  9380175 tcatattatttgtatgcattttgtcgttgtat 9380206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 445
Target Start/End: Original strand, 30493581 - 30493724
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| || |||||||||||| || || ||  ||||||||||    |||| |||||| | ||||||| |||  ||||||||| ||||| |||    
T  30493581 tcatattgaaagatcaacttcagtcaatctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattttggtgatttatatt 30493680  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaac 445  Q
    | ||||| || ||||||||||||||||||||||||| |||||||    
T  30493681 ttatcatgttgtttgtaggcattttgccgttgtatgctattaac 30493724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 342 - 434
Target Start/End: Original strand, 127758 - 127850
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgt 434  Q
    |||||||||| |  |||| ||||||||  |||||| |||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  127758 caatgatttgggcgtcaacgttgcagattcggaagcatgagtatttcggtgatttagattttatcatattatttgtaggcattttgccgttgt 127850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 30776715 - 30776858
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  |||||||||| |  | || |||||| | |  |||| |||  |||| |||| |||||||||| |    
T  30776715 tattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttagatttta 30776814  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||    
T  30776815 tcatattatttgtaggcattttgccgtggaatgctattaacttg 30776858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 26588513 - 26588367
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| || ||||||||||||||| || ||   |||||||||  | |||| |||||| | || |||| |||| ||||| ||| |||| ||||    
T  26588513 tcatattgaaagatcaacttcagtcaatcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtgattttgatt 26588414  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||||||| ||| |||||||| |||||||| | ||||||||    
T  26588413 ttatcatattatttttagacattttgctgttgtatgctcttaacttg 26588367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 3913561 - 3913469
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| || |||| |||  ||||| ||| |||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  3913561 tcaacgttgcagatccagaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgccattgtatgctattaacttg 3913469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 23128670 - 23128822
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || | ||||||||| ||| || ||  ||||||||||  | |||| |||| ||| ||||||| |||  ||||| ||| | |||  ||| |    
T  23128670 tattgaaagatcaacatcagtcaattacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagtttta 23128769  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| || |||||    
T  23128770 tcatattatttgtaggcattttgccgttgtatgctattaatttgggtgctgtg 23128822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 444
Target Start/End: Original strand, 31296923 - 31297011
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||| |||||||| ||||||| |||| |||| |||| ||||| |||| |||||||| ||||||||||||||| ||||||||| ||||||    
T  31296923 tcaacgttgcagatccggaagcatgagtattctggtgatttatattttatcatattgtttgtaggcattttgtcgttgtatgctattaa 31297011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 444
Target Start/End: Complemental strand, 31852232 - 31852092
Alignment:
Q  304 atattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttg 403  Q
    ||||||||||| || |||||||||| |||||||  |  ||||||||||    |||| |||||||| ||||||| |||| |||| |||| ||||| ||||     
T  31852232 atattgaaagatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaatttt 31852133  T
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||||||||||| ||| |||||||  |||||||| ||||||    
T  31852132 atcatattatttatagacattttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 30608516 - 30608410
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| || |||| |||||||| | ||||  |||  ||||| ||| | ||| |||| ||||||||||||||||||||||| |||||||||| |||    
T  30608516 caatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgacttatattttatcatattatttgtaggcattttaccgttgtatgctat 30608417  T
Q  442 taacttg 448  Q
    |||||||    
T  30608416 taacttg 30608410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 32327199 - 32327129
Alignment:
Q  361 gttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgt 431  Q
    |||||||| ||||||| |||| || |||||| |||||| ||| ||||||||||||||||||||||||||||    
T  32327199 gttgcagatccggaagcatgagtagtttggtgatttaggttttatcatattatttgtaggcattttgccgt 32327129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 1523511 - 1523603
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| || |||| |||  |||| |||| |||||||||| |||||||||||||||||||||||| ||| | ||| ||||||||||    
T  1523511 tcaacgttgcagatccagaagcatgggtattctggtgatttagattttatcatattatttgtaggcattttgtcgtggaatgctattaacttg 1523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 33053107 - 33053063
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  33053107 atcatattatttgtaggcattttgccgttgtatgctattaacttg 33053063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 606293 - 606408
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    ||||||||||   ||||| |||||||| ||||||  |||  ||||| ||| | |||  ||| |||||||||||||||||||||||||| ||||||| |||    
T  606293 caatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctat 606392  T
Q  442 taacttgagttctgtg 457  Q
    ||||||| || |||||    
T  606393 taacttgggtgctgtg 606408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 28844810 - 28844881
Alignment:
Q  157 gcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctca 228  Q
    |||||||||| | |||||||||||||| |||| | |||||||||||||||| |||  |||||||||||||||    
T  28844810 gcacatgactcatttaagtgatgttttaatctcaaccctttattttaatctgatggctgtaattcattctca 28844881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 67940 - 67887
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| || |||||    
T  67940 atcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtg 67887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 20225993 - 20226046
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| || |||||||||||||||||||||||| ||||||||| ||||||||||    
T  20225993 ttagaatttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 20226046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 22119977 - 22120030
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| || |||||||||||||||||||||||| ||||||||| ||||||||||    
T  22119977 ttagaatttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 22120030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 444
Target Start/End: Complemental strand, 528337 - 528249
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||| ||||||||  | ||||||| | |||| | || |||||||||| ||||||||||||||||| |||||| ||||||||| ||||||    
T  528337 tcaacgttgcagattctgaagtataagtattctagtgatttagattttatcatattatttgtaggtattttgtcgttgtatgctattaa 528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 14846180 - 14846116
Alignment:
Q  384 attttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| | |||| ||| ||||||||||||||||||||||||| ||| |||| ||||||||||    
T  14846180 attttggtgacttaggttttatcatattatttgtaggcattttgctgttttatgctattaacttg 14846116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 447
Target Start/End: Complemental strand, 7976174 - 7976083
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| |||| ||| ||||||| |||  |||| |||| ||||| |||| ||||||   ||||||||||||||||||||||||| |||||||||    
T  7976174 tcaacgttgtagatccggaagcatgggtattctggtgatttaaattttatcataccgtttgtaggcattttgccgttgtatgctattaactt 7976083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 448
Target Start/End: Complemental strand, 29255468 - 29255341
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  |||| ||| |||| ||||||  |||  ||||| ||| | |||||||| |||||||||||||||||    
T  29255468 tcagtcaattacaaattcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgacttagattttatcatattatttgtagg 29255369  T
Q  421 cattttgccgttgtatgttattaacttg 448  Q
    |||||  | |||||||| ||||||||||    
T  29255368 catttcactgttgtatgctattaacttg 29255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 444
Target Start/End: Complemental strand, 32191756 - 32191629
Alignment:
Q  317 agcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttg 416  Q
    ||||||||||||||||| || ||  ||||||||||     ||| |||||| | ||| ||| ||||  ||| |||| |||||||||| ||||||  |||||    
T  32191756 agcttcagtcaatcacatattcaatcaatgatttggacgccaacgttgcatatccgaaagcatgagcattctggtgatttagattttatcatacaatttg 32191657  T
Q  417 taggcattttgccgttgtatgttattaa 444  Q
    ||||||||||||| ||||||| ||||||    
T  32191656 taggcattttgccattgtatgctattaa 32191629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 444
Target Start/End: Complemental strand, 1933725 - 1933591
Alignment:
Q  310 aaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcata 409  Q
    ||||| || ||||| |||||||||||| ||  ||||||||||    |||| |||||||| ||||||  |||| |||| |||| ||||| |||| ||||||    
T  1933725 aaagatcaacttcaatcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccggaaacatgattattctggtgatttatattttatcata 1933626  T
Q  410 ttatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||| | || ||||||| | |||||||| ||||||    
T  1933625 ttatctatatgcatttttctgttgtatgctattaa 1933591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 457
Target Start/End: Complemental strand, 21426622 - 21426572
Alignment:
Q  407 atattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||| ||||||||||||||||| |||||||||| || |||||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaacttgggtgctgtg 21426572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 451
Target Start/End: Complemental strand, 27097603 - 27097534
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    |||||||||| |||||||||| |||||||||| | |||||||||| ||   ||||| |||||||||||||    
T  27097603 atattttggtgatttagattttatcatattatctctaggcattttaccagcgtatgctattaacttgagt 27097534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 29743100 - 29743195
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttg---tatgttattaacttg 448  Q
    |||| |||||||| |||||||   || |||| |||| |||||||| | |||||||||||| ||||||||||| |||||   |||||||||||||||    
T  29743100 tcaacgttgcagatccggaagctagagtattctggtgatttagatcttatcatattatttataggcattttgtcgttgtaatatgttattaacttg 29743195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 34018650 - 34018755
Alignment:
Q  343 aatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttatt 442  Q
    ||||||||| |  |||| |||||||| ||||||| |||| |||||  || | |||  ||| ||||||||||||||||||||||| | ||||||| |||||    
T  34018650 aatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtaggcattttactgttgtatattatt 34018749  T
Q  443 aacttg 448  Q
    | ||||    
T  34018750 atcttg 34018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 9341590 - 9341546
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||    
T  9341590 atcatattgtttgtaggcattttgtcgttgtatgctattaacttg 9341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 14175010 - 14174963
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  14175010 atcatattatttgtaggcatttttccgttttatgctgttaacttgagt 14174963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 14179546 - 14179499
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  14179546 atcatattatttgtaggcatttttccgttttatgctgttaacttgagt 14179499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 29319919 - 29319772
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| |  | ||||||||| ||| || ||  ||||||||||    |||| |||||| | ||||||| |||  ||||||||| | |||  ||    
T  29319919 tcatattgaaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaagtt 29319820  T
Q  402 tgatcatatta-tttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | ||||||||| |||||| ||||||| |||||||||| ||||||||||    
T  29319819 ttatcatattattttgtaagcattttaccgttgtatgctattaacttg 29319772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 7515150 - 7515088
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||| ||| ||||||||||||||||||||||| | | |||||| ||||||||||  |||||||    
T  7515150 ttaggttttatcatattatttgtaggcatttttctgctgtatgctattaacttggtttctgtg 7515088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 13546649 - 13546600
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    ||||| || ||||||||||||||||| |||||| ||||||||| ||||||    
T  13546649 ttagaatttatcatattatttgtaggtattttgtcgttgtatgctattaa 13546600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 30894741 - 30894794
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| |||||||||||||||| |||||||| |||||||| ||| ||||||    
T  30894741 ttaggttttatcatattatttgtagtcattttgctgttgtatgctatcaacttg 30894794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 34185653 - 34185604
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgtt 432  Q
    |||| |||| |||||||||| ||||||||||||||||| |||||| ||||    
T  34185653 tattctggtgatttagattttatcatattatttgtaggtattttgtcgtt 34185604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 4010494 - 4010430
Alignment:
Q  361 gttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattt 425  Q
    |||||||| ||||||| |||| ||||| ||| | ||||| || |||||||||||| |||||||||    
T  4010494 gttgcagatccggaagcatgagtatttcggtgacttagaatttatcatattatttataggcattt 4010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 302 - 451
Target Start/End: Complemental strand, 14916226 - 14916078
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    |||||||||||||||| ||||| ||||||| |||| ||  ||||||||||    || |||||||||| ||||||| |||||||||| | | |||||||||    
T  14916226 tcatattgaaagaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttgcagatccggaagcatgaatattt-gttgatttagatt 14916128  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    | |||||||| |||||||||||||||| |||||||| |||||||||||||    
T  14916127 ttatcatattgtttgtaggcattttgcagttgtatgctattaacttgagt 14916078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 457
Target Start/End: Complemental strand, 7677303 - 7677167
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| |||||| |   |||||||||| |  |||| |||||||| ||||||| |||||||||| ||| | |||| ||| ||||||||||||||| |    
T  7677303 tcagtcaattacagattcgaccaatgatttgagcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaag 7677204  T
Q  421 cattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||| || |||||    
T  7677203 cattttgccgttgtatgttattaacttgggtgctgtg 7677167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 457
Target Start/End: Original strand, 15344358 - 15344513
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||  ||||||||||||||||| ||  ||||||||||    |||| |||||||| || |||| | || |||| |||| |||||||||    
T  15344358 tcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagatt 15344457  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
      |||||||||||||||||||||||| ||||||||| |||||||||| || |||||    
T  15344458 atatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtg 15344513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 457
Target Start/End: Original strand, 15433423 - 15433578
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||  ||||||||||||||||| ||  ||||||||||    |||| |||||||| || |||| | || |||| |||| |||||||||    
T  15433423 tcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagatt 15433522  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
      |||||||||||||||||||||||| ||||||||| |||||||||| || |||||    
T  15433523 atatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtg 15433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 457
Target Start/End: Original strand, 15524727 - 15524882
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||  ||||||||||||||||| ||  ||||||||||    |||| |||||||| || |||| | || |||| |||| |||||||||    
T  15524727 tcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagatt 15524826  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
      |||||||||||||||||||||||| ||||||||| |||||||||| || |||||    
T  15524827 atatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtg 15524882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 41896570 - 41896713
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||   ||||||||  | ||||| |||||||| |  |||| |||| |||| |||| |||||||||| |    
T  41896570 tattgaaagatcagcttcagacaatcacaaattcaattaatgatttaggcatcaacgttgcagatctagaagcatgagtattctggtgatttagatttca 41896669  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  41896670 tcatattatttgtaggcattttgtcgttgtatgctattaacttg 41896713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 42046274 - 42046417
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  |||||||||| |  ||||||||||||| || |||| |||  |||| |||| |||||||||| |    
T  42046274 tattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtgatttagatttca 42046373  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||| | | ||||| ||||||||||    
T  42046374 tcatattatttgtaggcattttgacatcgtatgctattaacttg 42046417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 342 - 446
Target Start/End: Complemental strand, 16247222 - 16247118
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| | |||||||||||||| ||||||| |||  ||||| | | | |||||||||||||||||||||| |||||||||||||||||||| |||    
T  16247222 caatgatttgggcatcaatgttgcagatccggaagcatgggtatttcgctgacttagatttgatcatattatttgaaggcattttgccgttgtatgctat 16247123  T
Q  442 taact 446  Q
    |||||    
T  16247122 taact 16247118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 457
Target Start/End: Complemental strand, 18890735 - 18890583
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  |||||||||| |  |||| |||||||| || |||  ||   |||| |||| |||||||||| |    
T  18890735 tattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtattatggtgatttagatttta 18890636  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| || |||||    
T  18890635 tcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtg 18890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 471202 - 471057
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || ||||| ||||||| |||| ||  ||||||||||||  |||| |||||||| ||||||| |||  |||| || | |||||||||| |    
T  471202 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggtattctgatgatttagatttta 471103  T
Q  405 tcatattatttgtaggca--ttttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||  ||||| || |||||||||||||||||    
T  471102 tcatattatttgtaggcattttttgtcgatgtatgttattaacttg 471057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 444
Target Start/End: Complemental strand, 7198194 - 7198092
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    ||||||||||  | |||| |||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||| ||| |||||| ||||||||| |||    
T  7198194 caatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttagattttatcatattatttgcaggaattttgtcgttgtatgctat 7198095  T
Q  442 taa 444  Q
    |||    
T  7198094 taa 7198092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 20553226 - 20553133
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||| |||||||| ||||||| |||| ||||| ||| | |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  20553226 tcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttga 20553133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 457
Target Start/End: Complemental strand, 1236736 - 1236581
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| || ||||||||||||||| || ||  ||||||| ||    |||| |||||||| || |||| | || |||| |||| |||||||||    
T  1236736 tcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagatt 1236637  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
      |||||| ||||| ||||||||||||||||||||| |||||||||| || |||||    
T  1236636 atatcatactatttttaggcattttgccgttgtatgctattaacttgggtgctgtg 1236581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 1239436 - 1239290
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| || ||||||||||||||| || ||  ||||||| ||    |||| |||||||| || |||| | || |||| |||| |||||||||    
T  1239436 tcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagatt 1239337  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
      |||||| ||||||||||||||||| ||||||||| ||||||||||    
T  1239336 atatcatactatttgtaggcattttgacgttgtatgctattaacttg 1239290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 305 - 447
Target Start/End: Complemental strand, 29617310 - 29617168
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    ||||||||||||| |||||||||||||||||| ||  ||||||||||    |||| |||||||| ||  ||  ||   |||| |||| |||||||||| |    
T  29617310 tattgaaagaccaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccataaacattgttattctggtgatttagatttta 29617211  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||||||||||||||||  |||||||| |||||||||    
T  29617210 tcatattatttgtaggcattttgttgttgtatgctattaactt 29617168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 20559729 - 20559636
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||| |||||||| ||||||| |||| ||||| ||| | |||| ||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  20559729 tcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcattttgccgttgtatgctattaacttga 20559636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 20571291 - 20571198
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||| |||||||| ||||||| |||| ||||| ||| | |||| ||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  20571291 tcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcattttgccgttgtatgctattaacttga 20571198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 43833981 - 43833880
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| |  |||| |||| |||| |||| |||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  43833981 tcaacgttgcagatctagaagcatgagtattctggtgatttagtttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctg 43833882  T
Q  456 tg 457  Q
    ||    
T  43833881 tg 43833880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 342 - 442
Target Start/End: Original strand, 8867895 - 8867995
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| | ||||| |||| ||| | |||||  || ||||| |||| |||||||||| |||||||||||||||||||||||| |||||||||||||    
T  8867895 caatgatttgggcatcaaagttgaagatctggaagcttggatattctggtgatttagattttatcatattatttgtaggcattttgtcgttgtatgttat 8867994  T
Q  442 t 442  Q
    |    
T  8867995 t 8867995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 14585730 - 14585882
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||| | ||||||||| |||||||| || ||  || |||||||    |||| |||||||| || |||| |||  |||  |||| |||||||||| |    
T  14585730 tattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctggtgatttagatttca 14585829  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| || |||||    
T  14585830 tcatattatttgtaggcgttttgccgttgtatgctattaacttgggtgctgtg 14585882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 39657507 - 39657638
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    ||||||||||  |||||||| |||||| | || ||  ||||||||||    |||| |||||||| || |||| |||  |||| |||| |||||||||| |    
T  39657507 tattgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttca 39657606  T
Q  405 tcatattatttgtaggcattttgccgttgtat 436  Q
    ||||||||||||||||||||||||||||||||    
T  39657607 tcatattatttgtaggcattttgccgttgtat 39657638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 422
Target Start/End: Complemental strand, 24099294 - 24099169
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatc-----acagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttattt 396  Q
    ||||||||||| | |||||||||||||||     ||| || ||  |||||||||||   |||| |||||||| ||||||| | |||||||||||| ||||    
T  24099294 tcatattgaaaaatcagcttcagtcaatcgcatcacaaattcattcaatgatttgtacgtcaacgttgcagatccggaagaaagaatattttggtgattt 24099195  T
Q  397 agatttgatcatattatttgtaggca 422  Q
    |||||| |||||||||||||||||||    
T  24099194 agattttatcatattatttgtaggca 24099169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 457
Target Start/End: Complemental strand, 7883221 - 7883125
Alignment:
Q  361 gttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||| ||||||| |||  ||||| ||| | |||| ||| |||||||||||||||||||||||||||||||||  |||||||||| || |||||    
T  7883221 gttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatcctattaacttgggtgctgtg 7883125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 23230747 - 23230839
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  23230747 tcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 23230839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 37971387 - 37971479
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||  |||| ||||| ||| | |||| ||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  37971387 tcaacgttgcagatccggaaacatgagtatttcggtgacttaggttttatcacattatttgtaggcattttgccgttgtatgctattaacttg 37971479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 10377779 - 10377894
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    ||||||||||   ||||| |||||||| ||||||| |||  ||||| ||  | |||  ||| |||||||||||||||||||||||||||||||||| |||    
T  10377779 caatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaagttttatcatattatttgtaggcattttgccgttgtatgctat 10377878  T
Q  442 taacttgagttctgtg 457  Q
    ||||||| || |||||    
T  10377879 taacttgggtgctgtg 10377894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 425
Target Start/End: Complemental strand, 8443545 - 8443427
Alignment:
Q  307 ttgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatc 406  Q
    |||||||| || ||||||||||||||| || ||  ||||||||||   ||||| |||||||| ||||||| |    |||| |||| ||||||||||||||    
T  8443545 ttgaaagatcaacttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagcactggtattatggtgatttagatttgatc 8443446  T
Q  407 atattatttgtaggcattt 425  Q
    ||||||||||||| |||||    
T  8443445 atattatttgtagacattt 8443427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 28086759 - 28086706
Alignment:
Q  394 tttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  28086759 tttagattttatcatattatttgtaggcattttgtcgttgtatgctattaactt 28086706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 3673545 - 3673637
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||| |||||  || | |||  ||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  3673545 tcaacgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggcattttgccgttgtatcctattaacttg 3673637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 18846450 - 18846370
Alignment:
Q  357 caatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatg 437  Q
    |||||||| ||||||||||  |||| |||| |||| |||||||||| || ||||||||||||||||||||||  |||||||    
T  18846450 caatgttgtagacccggaaacatgagtattatggtgatttagattttattatattatttgtaggcattttgctattgtatg 18846370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 31013545 - 31013501
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  31013545 atcatattatttgtaggcattttgccgttgtatgctattaacttg 31013501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 444
Target Start/End: Original strand, 5333482 - 5333621
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || ||||||||||||||| || ||  |||| ||||| |  |||| |||| ||| || |||| |||| |||| | || ||||||||||      
T  5333482 tattgaaagatcaacttcagtcaatcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgatttagattttg 5333581  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||||||||||||| ||||||||  |||||||| ||||||    
T  5333582 tcatattatttgtatgcattttgttgttgtatgctattaa 5333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 448
Target Start/End: Complemental strand, 16928777 - 16928650
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  ||||||||||   ||||| |||||||| ||| |||  ||  ||||| ||| | |||| ||| |||||||||||||||||    
T  16928777 tcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttaggttttatcatattatttgtagg 16928678  T
Q  421 cattttgccgttgtatgttattaacttg 448  Q
    ||||||||| ||||||| ||||||||||    
T  16928677 cattttgccattgtatgctattaacttg 16928650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 457
Target Start/End: Original strand, 34493128 - 34493207
Alignment:
Q  378 atgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||| ||||||||| | |||||||| || ||||||| | ||||||||||| ||||| |||||||||||||||||| ||||    
T  34493128 atgagtattttggtgaattagattttatgatattatatataggcattttgtcgttgcatgttattaacttgagttttgtg 34493207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 45445847 - 45445704
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||| ||| || ||  |||||||||| |  |||| |||| | | ||||||| |||   |||||||| | |||||||| |    
T  45445847 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgacttagatttta 45445748  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||  ||| |||| ||||||||||    
T  45445747 tcatattatttgtaggcattttgttgttttatgctattaacttg 45445704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 5046879 - 5046949
Alignment:
Q  378 atgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||  || | ||||| || |||||||||||||||||||||||  ||||||||||||||||||||    
T  5046879 atgaatatttcagtgacttagaatttatcatattatttgtaggcattttatcgttgtatgttattaacttg 5046949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 27110464 - 27110358
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| |||||||| | ||||| |||  |||||| || | |||||||| |||||||||||||||| ||||||  ||||||||| |||    
T  27110464 caatgatttgagcgtcaacgttgcagatctggaagcatgtgtattttagtgacttagattttatcatattatttgtagacattttatcgttgtatgctat 27110365  T
Q  442 taacttg 448  Q
    |||||||    
T  27110364 taacttg 27110358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 9637407 - 9637302
Alignment:
Q  343 aatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttatt 442  Q
    ||||||||| |  |||| ||||||||  |||||  |||| ||||| ||| | |||| ||| |||||||||||| ||||||||||| ||||||||| ||||    
T  9637407 aatgatttgagcgtcaacgttgcagattcggaaacatgagtatttcggtaacttaggttttatcatattatttttaggcattttgtcgttgtatgctatt 9637308  T
Q  443 aacttg 448  Q
    ||||||    
T  9637307 aacttg 9637302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 29939443 - 29939495
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| ||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  29939443 ttaggttttatcatattatttgtagtcattttgccgttgtatgatattaactt 29939495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 444
Target Start/End: Complemental strand, 33347557 - 33347418
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || |||||||||||||||||| ||  |||||||||  |  || | ||||| || ||| ||| |||  ||||| ||| | | ||| || |    
T  33347557 tattgaaagatcaacttcagtcaatcacagattcaatcaatgatttaggcgtcgacgttgcggatccgaaagcatgggtatttcggtgactcagaattta 33347458  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    ||||||||||||||||||||||| | ||||||| ||||||    
T  33347457 tcatattatttgtaggcattttgtcattgtatgctattaa 33347418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 25238535 - 25238485
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||| |||||||||||| ||| ||||||||||||||||||||| |||||||    
T  25238535 attttatcatattatttatagacattttgccgttgtatgttataaacttga 25238485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 444
Target Start/End: Complemental strand, 40211301 - 40211199
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| |||| ||| ||||||| |||| ||||| | | | || ||||| ||||||||||||||| ||||| |||||||||||| |||    
T  40211301 caatgatttgggcgtcaacgttgtagatccggaagcatgagtatttcgttgacttggattttatcatattatttgtaagcattatgccgttgtatgctat 40211202  T
Q  442 taa 444  Q
    |||    
T  40211201 taa 40211199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 30568267 - 30568214
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| ||||| ||||||||||||||||||||||| |||| ||||||||||    
T  30568267 ttaggttttatcatgttatttgtaggcattttgccgttttatgctattaacttg 30568214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 40619015 - 40618966
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||||| |||| |||||||||||||||||| ||||||||||    
T  40619015 attttatcatattatgtgtatgcattttgccgttgtatgctattaacttg 40618966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 42756729 - 42756668
Alignment:
Q  178 tgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctcata 239  Q
    |||||| |||||||||||| |||||||||| |||  || |||| ||||||||||||||||||    
T  42756729 tgttttaatcttatcccttaattttaatctaatggctgcaatttattctcaccattctcata 42756668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 14913235 - 14913279
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttatta 443  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||    
T  14913235 attttatcatattatttgtaggtattttgccgttgtatgctatta 14913279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 448
Target Start/End: Complemental strand, 17693634 - 17693506
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  ||||  ||||||| ||||||| |||| ||||| | | | |||  ||| |||||||||||||||||    
T  17693634 tcagtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaagcatgagtatttcgatgacttatgttttatcatattatttgtagg 17693535  T
Q  421 ca-ttttgccgttgtatgttattaacttg 448  Q
    || |||||  |||||||||||||||||||    
T  17693534 catttttgttgttgtatgttattaacttg 17693506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 12184436 - 12184485
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||||||||||||||||| ||||||| |||||||| |||| |||||    
T  12184436 attttatcatattatttgtaggtattttgctgttgtatgctattgacttg 12184485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 12428864 - 12428913
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||||||||||||||||| ||||||| |||||||| |||| |||||    
T  12428864 attttatcatattatttgtaggtattttgctgttgtatgctattgacttg 12428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 26469104 - 26469055
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgtt 432  Q
    |||| |||| |||||||||| ||||||||||||||||| |||||| ||||    
T  26469104 tattctggtgatttagattttatcatattatttgtaggtattttgtcgtt 26469055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 24186603 - 24186555
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| |||||||||||| ||||||||||||||| ||||  |||||||||    
T  24186603 attttatcatattatttataggcattttgccgtcgtatactattaactt 24186555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 444
Target Start/End: Original strand, 22742997 - 22743136
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  |||||||||| |  |||| |||||||| || |||| |||| |||| |||| |||||||||| |    
T  22742997 tattgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagtattctggtgatttagatttca 22743096  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  22743097 tcatattatttgttggcattttgccgttgtatgctattaa 22743136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 28476280 - 28476431
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  |||||||||| |  |||| |||||||| || ||||||||  ||||  ||| |||||||||| |    
T  28476280 tattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggtattc-ggtgatttagatttta 28476378  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| |||||    
T  28476379 tcatattatttgtaggcattttgccgtgcaatgttattaacttgagtgctgtg 28476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 31238827 - 31238951
Alignment:
Q  119 gattgtggggggagcgagagaaagttgaatgggaaatg------gcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatga 212  Q
    ||||||||||||||  |||||||||||||||| | |||      |||||||||| |||||||||||||||| |||| |||||||||||||||||| |||     
T  31238827 gattgtggggggag--agagaaagttgaatggcacatgacaatagcacatgactcacttaagtgatgttttaatctcatccctttattttaatctgatgg 31238924  T
Q  213 ttgtaattcattctcaccattctcata 239  Q
    |||||||||||||||| ||||||||||    
T  31238925 ttgtaattcattctcatcattctcata 31238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 447
Target Start/End: Complemental strand, 24069435 - 24069290
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||| | |||||||  |||||||||| | ||  ||||||||||    |||| |||||||||||||||| ||||  ||| |||| |||||||||    
T  24069435 tcatattgaaatatcagcttcgatcaatcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgaggattctggtgatttagatt 24069336  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    | |||||||||||||||||||||||  ||||||||| |||||||||    
T  24069335 ttatcatattatttgtaggcattttatcgttgtatgctattaactt 24069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 35133000 - 35133143
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || |||||| |||||||| || ||  |||||||||| |  |||| |||||||| ||  ||| |||| |||| | || |||||||||| |    
T  35133000 tattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattctagtgatttagatttca 35133099  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||    
T  35133100 tcatattatttctaggcattttgccgttgtatgctattaacttg 35133143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 457
Target Start/End: Complemental strand, 35665176 - 35665021
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    |||||| |||||| || |||||||| |||| |||| ||  ||||||||||    ||||||||||||||||  ||| |||  |||||| || |||||||||    
T  35665176 tcatatcgaaagatcaacttcagtcgatcagagattcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgtattttagtgatttagatt 35665077  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    | |||||||||||| | ||||||||| ||||||||| |||||||||| || |||||    
T  35665076 ttatcatattattttttggcattttgtcgttgtatgctattaacttgggtactgtg 35665021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 443
Target Start/End: Complemental strand, 38880616 - 38880477
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| |||||||||||||||||| || ||  |||||||||| ||  ||| |||||||| | ||||| |||  |||||| ||||||||||||| |    
T  38880616 tattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgtattttagttatttagatttta 38880517  T
Q  405 tcata-ttatttgtaggcattttgccgttgtatgttatta 443  Q
    ||||| |||| ||||| ||||||| ||||||| |||||||    
T  38880516 tcatacttatctgtagacattttgtcgttgtaagttatta 38880477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 356 - 444
Target Start/End: Complemental strand, 9450124 - 9450036
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||| |||||||| ||||||| |||  |||||| || |||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  9450124 tcaacgttgcagatccggaagcatgggtattttagtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaa 9450036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 12141295 - 12141203
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  12141295 tcaacgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttgtatgcattttgccgttgtatgctattaacttg 12141203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 39171577 - 39171485
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  39171577 tcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 39171485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 342 - 446
Target Start/End: Original strand, 46700125 - 46700229
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| | ||||  |||||||| ||||||| ||| |||||| ||| | |||||||| |||||||||||| |||||||||||||||| |||| |||    
T  46700125 caatgatttgggcatcagcgttgcagatccggaagcatggatatttcggtgacttagattttatcatattatttataggcattttgccgttatatgctat 46700224  T
Q  442 taact 446  Q
    |||||    
T  46700225 taact 46700229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 48061526 - 48061618
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||  ||| |||| ||||| ||| |||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  48061526 tcaacgttgcagatccttaagcatgagtatttcggtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 48061618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 448
Target Start/End: Original strand, 42978679 - 42978806
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  |||| |||||||| ||||||| |||  ||||| ||| | |||| ||| |||||||||| ||||||    
T  42978679 tcagtcaataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttaggttttatcatattatatgtagg 42978778  T
Q  421 cattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||| ||||||||||    
T  42978779 cattttgccgttgtatgctattaacttg 42978806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 19404758 - 19404652
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  ||||||||||||| ||||||| |||| |||||  || | |||||||| |||||||||||||||||| ||||||||||| | | |||    
T  19404758 caatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgacttagattttatcatattatttgtaggctttttgccgttgcacgctat 19404659  T
Q  442 taacttg 448  Q
    |||||||    
T  19404658 taacttg 19404652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 41553475 - 41553329
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||  |||||||||||||| || ||   |||||||||    |||| |||||||| ||||||  ||  |||||||||| |||||||||    
T  41553475 tcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttgcagatccggaaacatagatattttggtgatttagatt 41553376  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | ||||||| |||| || | |||||||||||||||| ||||||||||    
T  41553375 ttatcatatcatttatacgtattttgccgttgtatgctattaacttg 41553329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 448
Target Start/End: Original strand, 48930797 - 48930903
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| || |||| |||||||| || |||  ||   |||| |||| |||||||||| |||||||||||||| ||||||||||||||||||| |||    
T  48930797 caatgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatattatttgttggcattttgccgttgtatgctat 48930896  T
Q  442 taacttg 448  Q
    |||||||    
T  48930897 taacttg 48930903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 13796916 - 13796824
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||| ||||| ||| | |||  ||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  13796916 tcaacgttgcagatccggaagcatgagtatttaggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 13796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 3398331 - 3398386
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||    
T  3398331 atttagattttatcatattatttttaggcattttaccgttgtatgttattaacttg 3398386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 448
Target Start/End: Original strand, 47590401 - 47590507
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| |||||| | ||||||| |||| ||||| ||  | |||| ||| |||||||||||||||||||||||||||||||| | |||    
T  47590401 caatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttaggttttatcatattatttgtaggcattttgccgttgtaagctat 47590500  T
Q  442 taacttg 448  Q
    |||||||    
T  47590501 taacttg 47590507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 457
Target Start/End: Complemental strand, 48316792 - 48316698
Alignment:
Q  363 tgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||| ||||||| |||  ||||| ||  |||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||| || |||||    
T  48316792 tgcagatccggaagcatgggtatttcggcgatttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtg 48316698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 8001533 - 8001432
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| ||||||||  |||||  |||| ||||| ||| | |||| ||| |||||||||||| ||||||||||||||||||||| |||||||||| || |||    
T  8001533 tcaacgttgcagattcggaatcatgagtatttcggtgacttaggttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctg 8001434  T
Q  456 tg 457  Q
    ||    
T  8001433 tg 8001432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 28044743 - 28044651
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||  |||  ||||| ||| |||||| ||| |||||||||||| ||| ||||||||||||||||| ||||||||||    
T  28044743 tcaacgttgcagatccggaaacatgggtatttcggtgatttaggttttatcatattatttttagacattttgccgttgtatgctattaacttg 28044651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 457
Target Start/End: Complemental strand, 37837480 - 37837344
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  |||| |||||||| ||||||| |||   |||| ||| | |||| ||| ||||||||| |||||||    
T  37837480 tcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttaggttttatcatattacttgtagg 37837381  T
Q  421 cattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||| |||| |||||||||| || |||||    
T  37837380 cattttgccgttttatgctattaacttgggtgctgtg 37837344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 40993309 - 40993353
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  40993309 atcatattatttgtaggcattttgtcgttgtatgttattaacttg 40993353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 45349758 - 45349694
Alignment:
Q  384 attttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| |||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  45349758 atttcggtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 45349694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 38798834 - 38798977
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||| ||| || ||  |||||||||| |  ||||  ||| ||| ||||||| |||   |||| ||| | |||||||| |    
T  38798834 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgacttagatttta 38798933  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||||||  |||| ||||||||||    
T  38798934 tcatattatttgtaggcattttgccgtcttatgctattaacttg 38798977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 43369698 - 43369649
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||||    
T  43369698 attttatcatattatttataggcattttgccgttgtatgatattaacttg 43369649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 448
Target Start/End: Complemental strand, 5000000 - 4999924
Alignment:
Q  372 ggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| ||||||||| |||| ||||| |||| |||||||||||| ||| ||||||  |||||||||||||| |||||    
T  5000000 ggaagcatgaatattctggtgatttaaattttatcatattatttatagacattttttcgttgtatgttattgacttg 4999924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 449
Target Start/End: Original strand, 24770299 - 24770443
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||||||| || ||  |||||||||| |  |||| |||| ||| || |||| |||   |||| ||  | |||| ||| |    
T  24770299 tattgaaagatcggcatcagtcaatcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttaggtttta 24770398  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||    
T  24770399 tcatattattggtagacattttgccgttttatgttattaacttga 24770443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 446
Target Start/End: Complemental strand, 25287147 - 25287083
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaact 446  Q
    |||||| ||| | |||||||| |||||||||||||||| |||||||| |||||||| ||||||||    
T  25287147 atatttcggtgacttagattttatcatattatttgtagccattttgctgttgtatgctattaact 25287083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 28407857 - 28407813
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  28407857 atcatattatttgtagacattttgccgttgtatgctattaacttg 28407813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 34899546 - 34899502
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||    
T  34899546 atcatattatttgtatgcattttgccgttgtatgctattaacttg 34899502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 446
Target Start/End: Complemental strand, 46244213 - 46244149
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaact 446  Q
    |||||||||| | ||  |||| |||||||||||||||||||||||| | ||||||||||||||||    
T  46244213 atattttggtcactttaattttatcatattatttgtaggcattttgtcattgtatgttattaact 46244149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 448
Target Start/End: Complemental strand, 5348529 - 5348487
Alignment:
Q  406 catattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  5348529 catattatttgtaggcattttaccgttgtatgctattaacttg 5348487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 448
Target Start/End: Complemental strand, 9977183 - 9977105
Alignment:
Q  370 ccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||| ||||  ||||||| | | |||||||| |||||||||||| ||| ||||||| ||||||||| ||||||||||    
T  9977183 ccggaattatgtgtattttgatgagttagattttatcatattatttttagacattttgtcgttgtatgctattaacttg 9977105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 444
Target Start/End: Original strand, 19296974 - 19297062
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||  ||| ||||||||||||||||||||||||| ||| |||| ||||||    
T  19296974 tcaacgttgcagatccggaagcatgggtatttcggtaacttaagttttatcatattatttgtaggcattttgctgttatatgctattaa 19297062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 447
Target Start/End: Original strand, 27341705 - 27341745
Alignment:
Q  407 atattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  27341705 atattatttgtaggcattttgccgttatatgctattaactt 27341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 447
Target Start/End: Complemental strand, 30756807 - 30756715
Alignment:
Q  355 atcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    ||||| |||||||| ||||||| |||| ||||| ||| | |||  ||| |||||||||||| ||||||||||| |||| |||| | |||||||    
T  30756807 atcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttataggcattttgtcgttttatgctgttaactt 30756715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 448
Target Start/End: Complemental strand, 3223038 - 3222999
Alignment:
Q  409 attatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  3223038 attatttatagacattttgccgttgtatgttattaacttg 3222999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 46822692 - 46822638
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||| ||||||||||||||| |||||||| | ||||||| ||||||||||    
T  46822692 atttagattttatcatattatttgta-gcattttgtcattgtatgctattaacttg 46822638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 457
Target Start/End: Complemental strand, 39328725 - 39328679
Alignment:
Q  411 tatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||| |||| |||||||||| || |||||    
T  39328725 tatttgtaggcattttgccgttttatgctattaacttgggtgctgtg 39328679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 11343935 - 11344004
Alignment:
Q  378 atgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| ||||||||| ||||| |||| |  |||||||||||||| ||||||  |||||||| |||||||||    
T  11343935 atgagtattttggtgatttatattttacaatattatttgtaggtattttgatgttgtatgctattaactt 11344004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 25255317 - 25255422
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||| ||||| | ||| |||||||||| || |||| |||   ||||| || | ||||| || || |||| |||||||||||||||| ||||||||| |||    
T  25255317 caattatttgggcatcgatgttgcagatcctgaagcatgggcattttagtgacttagagtttataatatcatttgtaggcattttgtcgttgtatgctat 25255416  T
Q  442 taactt 447  Q
    ||||||    
T  25255417 taactt 25255422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 58129 - 57983
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||| ||||||| ||||||||||||||||||||| ||  | ||||||||    ||||  ||||||| ||||||| |||| |||| |||| |||||||||    
T  58129 tcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatt 58030  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||| |||||||||||||||||||| |||| ||||||||||    
T  58029 tcatcatattttttgtaggcattttgccgttatatgctattaacttg 57983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 21686229 - 21686128
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| |||| ||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||    
T  21686229 tcaacgttgcagatccggaagcatgagtattttggtgatttaggttttatcatattatttgtaggcattttgccgctgtatgttattaacttgggtgctg 21686130  T
Q  456 tg 457  Q
    ||    
T  21686129 tg 21686128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 305 - 451
Target Start/End: Original strand, 27652015 - 27652160
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| |||||| || |||||||| || ||  |||||||||| ||||||| |||||||| || |||| |||  |||| | ||  ||||||||| |    
T  27652015 tattgaaagatcagctttagacaatcacaaattcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggtattctagtg-tttagatttca 27652113  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  27652114 tcatattatttgtagacattttgccgttgtatgctattaacttgagt 27652160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 52944379 - 52944525
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||||||||||||||||||||| ||  | ||||||||    |||| |||||||| ||||||| |||  |||| |||| |||||||||    
T  52944379 tcatattgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattctggtgatttagatt 52944478  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||| |||||||||||||||  ||| |||| ||||||||||    
T  52944479 tcatcatattttttgtaggcattttgtagttatatgctattaacttg 52944525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 457
Target Start/End: Complemental strand, 47320434 - 47320298
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    |||||||||||||||| ||  ||||||||||    |||| |||||||| || |||| | || |||| |||| |||||||||  |||||||||||||||||    
T  47320434 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtagg 47320335  T
Q  421 cattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||| |||||||||| || |||||    
T  47320334 cattttgccgttgtatgctattaacttgggtgctgtg 47320298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 31891325 - 31891182
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||| | ||| ||||| |||||||| || || || |||||||| |  |||| |||||| | || |||| |||| |||| |||| |||||||||| |    
T  31891325 tattgaaaaatcagtttcagacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagtattctggtgatttagatttca 31891226  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | ||||||||||||||||||||||||||||||| ||||||||||    
T  31891225 ttatattatttgtaggcattttgccgttgtatgctattaacttg 31891182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 36194780 - 36194922
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||  |||||||| || ||  ||||||||||   ||||| |||||||| || |||  |||  |||| |||| |||||||||| |    
T  36194780 tattgaaagatcagcttcaaacaatcacaaattcaatcaatgatttgac-atcaaagttgcagatccagaaacatgggtattctggtgatttagatttca 36194878  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  36194879 tcatattatttgtaggcattttgccgttgtatgctattaacttg 36194922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 2520901 - 2520993
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  2520901 tcaacgttgcagatccggaagcatgggtatttcggtgatttagattttatcgtattatttgtaggcattttgccgttgtatgctattaacttg 2520993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 355 - 457
Target Start/End: Complemental strand, 29960937 - 29960835
Alignment:
Q  355 atcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttct 454  Q
    ||||| |||||||| ||||||  || |||||||| || |||||||||| |||||| ||||||||||||||||||||||||||| | |||||||| || ||    
T  29960937 atcaacgttgcagatccggaaacataaatattttagtgatttagattttatcatactatttgtaggcattttgccgttgtatgcttttaacttgggtgct 29960838  T
Q  455 gtg 457  Q
    |||    
T  29960837 gtg 29960835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 361 - 437
Target Start/End: Complemental strand, 10258878 - 10258802
Alignment:
Q  361 gttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatg 437  Q
    |||||| ||||||||| |||||||||||||| | |||||||| |||||||||||||||| |||||||| ||||||||    
T  10258878 gttgcatacccggaagcatgaatattttggtgacttagattttatcatattatttgtagacattttgctgttgtatg 10258802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 52933912 - 52933841
Alignment:
Q  380 gaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||||| |||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||    
T  52933912 gaatattatggtgatttagattttatcatattatttgtaggtattttgcttttgtatgttattaacttgagt 52933841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 451
Target Start/End: Original strand, 21662508 - 21662654
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || | ||||||||| ||| |||||  |||||||||| |  |||| |||||||| ||||||| |||  ||||| ||| | |||| ||| |    
T  21662508 tattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggtttta 21662607  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||||||||||||| || ||||  |||||||| |||||||||||||    
T  21662608 tcatattatttgtagacactttggtgttgtatgctattaacttgagt 21662654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 451
Target Start/End: Original strand, 21671272 - 21671418
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || | ||||||||| ||| |||||  |||||||||| |  |||| |||||||| ||||||| |||  ||||| ||| | |||| ||| |    
T  21671272 tattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggtttta 21671371  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||||||||||||| || ||||  |||||||| |||||||||||||    
T  21671372 tcatattatttgtagacactttggtgttgtatgctattaacttgagt 21671418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 22611305 - 22611406
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| |||| ||||| ||| | |||  ||| |||||||||||||||||||||||||||||||||| |||||| ||| || |||    
T  22611305 tcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatggtattaaattgggtgctg 22611404  T
Q  456 tg 457  Q
    ||    
T  22611405 tg 22611406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 19853499 - 19853407
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| ||| |||||| ||| | |||  ||| |||||||||||| ||||||||||||||||||||| ||||||||||    
T  19853499 tcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttctaggcattttgccgttgtatgctattaacttg 19853407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 446
Target Start/End: Complemental strand, 29120360 - 29120276
Alignment:
Q  362 ttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaact 446  Q
    ||||||| | ||||| |||| ||||| ||| | |||||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  29120360 ttgcagatctggaagcatgagtatttcggtaacttagattttatcatattatttgtaggcattttgtcgttgtatgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 53811150 - 53811242
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||| ||||| ||| | |||  ||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  53811150 tcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttggcgttgtatgctattaacttg 53811242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 445
Target Start/End: Original strand, 45418620 - 45418723
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| | ||||| |||||||| ||| ||| |  | ||||| ||| | |||||||| |||||||||||||||||||||||| ||||||||| |||    
T  45418620 caatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttagattttatcatattatttgtaggcattttgtcgttgtatgctat 45418719  T
Q  442 taac 445  Q
    ||||    
T  45418720 taac 45418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 6155184 - 6155118
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| |||| |||||||||  |||||||||||||||||||||||| ||||||||| ||||||||||    
T  6155184 atattctggtgatttagattctatcatattatttgtaggcattttgtcgttgtatgctattaacttg 6155118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 36161855 - 36161925
Alignment:
Q  378 atgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||| || |||||||||| |||||||||||||||||||||| | |||| |||||||||||||||    
T  36161855 atgagtattttcgtgatttagattttatcatattatttgtaggcatttggtcgttatatgttattaacttg 36161925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 448
Target Start/End: Original strand, 37465630 - 37465696
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| |||| |||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  37465630 atattctggtgatttagattttatcatattatttgtaagcattttgtcgttgtatgctattaacttg 37465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 18935931 - 18935996
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||    
T  18935931 tattctggtgatttagatttcatcatattatttgtaggcattttgctattgtacgttattaacttg 18935996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 43510318 - 43510419
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    ||||||||||||| || |||| |||  ||||| ||| | |||  ||| |||||||||||||||||||||||| |||||||||| ||||||||| || |||    
T  43510318 tcaatgttgcagatcctgaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgtcattaacttgggtgctg 43510417  T
Q  456 tg 457  Q
    ||    
T  43510418 tg 43510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 395 - 451
Target Start/End: Original strand, 9714071 - 9714127
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    |||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||    
T  9714071 ttagattttatcatattatttgtaggcattttgtcattgtatgttgttaacttgagt 9714127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 377 - 449
Target Start/End: Complemental strand, 22305587 - 22305515
Alignment:
Q  377 tatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    ||||| ||||||| | | |||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||    
T  22305587 tatgagtattttgatgacttagattttatcatattatttgtaggtattttgtcgttgtatgctattaacttga 22305515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 444
Target Start/End: Complemental strand, 36204366 - 36204278
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||| |||||||| |||||||   ||||||| |||| |||||||||| ||||||||||||||||  |||||||| || |||||||||||    
T  36204366 tcaacgttgcagatccggaagagagaatattctggtgatttagattttatcatattatttgtagatattttgccattatatgttattaa 36204278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 10496406 - 10496549
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||| ||| || ||  |||||||||| |  ||||  ||||||| ||| ||| |||  ||||| ||| | |||| ||| |    
T  10496406 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttaggtttta 10496505  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||| || ||||| ||||||||||    
T  10496506 tcatattatttgtaggcattttgctgtcgtatgctattaacttg 10496549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 449
Target Start/End: Original strand, 54021968 - 54022074
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    ||||||||||  | |||| |||||||| ||| ||  ||| |||||| ||| | |||||||| |||||||||||||||| || |||| |||||||||||||    
T  54021968 caatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgacttagattttatcatattatttgtagaca-tttgtcgttgtatgttat 54022066  T
Q  442 taacttga 449  Q
    ||||||||    
T  54022067 taacttga 54022074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 448
Target Start/End: Complemental strand, 56040628 - 56040541
Alignment:
Q  361 gttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| || |||| |||  ||||| ||| | |||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  56040628 gttgcagatccagaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 56040541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 32766636 - 32766737
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    ||||||||||||| ||||||  |||  ||||| ||| | |||  ||| ||||||||||||||||||||| || ||||||||| |||||||||| || |||    
T  32766636 tcaatgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcattatgtcgttgtatgctattaacttgggtgctg 32766735  T
Q  456 tg 457  Q
    ||    
T  32766736 tg 32766737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 51888176 - 51888107
Alignment:
Q  378 atgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| |||| |||| |||||||||| |||||||||||||||||| ||||||| ||| ||| |||||||||    
T  51888176 atgagtattctggtgatttagattttatcatattatttgtaggcgttttgccattgcatgctattaactt 51888107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 9178523 - 9178567
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  9178523 atcatattatttgtaggcattttgtcgttgtatgctattaacttg 9178567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 426
Target Start/End: Complemental strand, 22038843 - 22038719
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| |  ||||||||||||||| || ||   ||||||||    |||||||||||||| || |||| |||  ||||| ||| ||||| |||    
T  22038843 tcatattgaaagatctacttcagtcaatcacatattcaataaatgattttgacatcaatgttgcagatccagaagcatgtgtatttcggtgatttaaatt 22038744  T
Q  402 tgatcatattatttgtaggcatttt 426  Q
    | |||||| ||||||||||||||||    
T  22038743 ttatcataatatttgtaggcatttt 22038719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 42032479 - 42032423
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||||||| | ||||||||||| |||| ||||||||||||||||| |||||||||||    
T  42032479 atttagatgttatcatattattggtagccattttgccgttgtatgctattaacttga 42032423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 48257571 - 48257527
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  48257571 atcatattatttgtaggtattttgccgttgtatgctattaacttg 48257527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 53444189 - 53444341
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||| ||| || ||  |||||||||| |  ||||||||| ||| ||||||| |||   |||| ||| | |||| ||| |    
T  53444189 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 53444288  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||  ||||| ||||| |||| |||||||||| || |||||    
T  53444289 tcatattatttgtagatatttttccgttttatgctattaacttgggtgctgtg 53444341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 443
Target Start/End: Complemental strand, 26633658 - 26633571
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttatta 443  Q
    ||||||||||||| ||||||| ||||||||||  || | |||| ||| |||||||||  | |||||||||| |||||||||| |||||    
T  26633658 tcaatgttgcagatccggaagcatgaatatttctgtgacttaggttttatcatattaaatataggcattttaccgttgtatgctatta 26633571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 43853602 - 43853657
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||| ||||||||||||||  ||||||||  |||||||||||||||||||    
T  43853602 atttagattttatcatattatttgtcagcattttgttgttgtatgttattaacttg 43853657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 2069621 - 2069476
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||| | ||| || ||||||||| |||| ||  |||| ||||| || |||| |||||| |    |||| |||  |||| |||| ||||| |||    
T  2069621 tcatattgaaatatcagttttagtcaatcatagattcaatcaattatttgggtgtcaacgttgcaaatttagaagcatgggtattatggtgatttatatt 2069522  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  2069521 ttatcatattatttgtatgcattttaccgtt-tatgttattaacttg 2069476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 7008939 - 7008885
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    ||||| |||| |||||||||||||| | ||||||||||||||||| |||||||||    
T  7008939 atttaaattttatcatattatttgtggacattttgccgttgtatgctattaactt 7008885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 51682094 - 51682012
Alignment:
Q  155 tggcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctca 237  Q
    |||||||||||||||||| || ||||||| |||  |||||||  |||||||||  ||  ||||||| ||||||||||||||||    
T  51682094 tggcacatgactaacttaggttatgttttaatcgcatcccttgcttttaatctattggctgtaatttattctcaccattctca 51682012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 51682394 - 51682475
Alignment:
Q  155 tggcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctca 237  Q
    ||||||||||||||||| ||| ||||||| ||||||||| ||  ||||||||| ||| ||||||||  ||||||| |||||||    
T  51682394 tggcacatgactaacttcagttatgttttaatcttatccattgcttttaatctaatggttgtaatt-tttctcacaattctca 51682475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 13634237 - 13634338
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||  |||  |||||  || |||||| ||| ||| ||||||||||||  |||||||||||||||| |||||||||| || |||    
T  13634237 tcaacgttgcagatccggaaacatgggtatttcagtgatttaggttttatcttattatttgtagttattttgccgttgtatgctattaacttgggtgctg 13634336  T
Q  456 tg 457  Q
    ||    
T  13634337 tg 13634338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 24099015 - 24098963
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  24099015 ttaggttttatcatattatttgtaggcattttgccgttg-atgctattaacttg 24098963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 35348468 - 35348521
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| |||||||||||||||||||||||||| || |||| ||||||||||    
T  35348468 ttaggttttatcatattatttgtaggcattttgccattttatgctattaacttg 35348521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 11299949 - 11299905
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||    
T  11299949 atcatattattcgtaggcattttggcgttttatgttattaacttg 11299905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 17949311 - 17949219
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||||| | | |||| ||| |||||||||| |||| ||||||||   ||||||||||||||||||    
T  17949311 tcaacgttgcagatccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgcattttgttcttgtatgttattaacttg 17949219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 17953163 - 17953071
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||||| | | |||| ||| |||||||||| |||| ||||||||   ||||||||||||||||||    
T  17953163 tcaacgttgcagatccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgcattttgttcttgtatgttattaacttg 17953071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 22806706 - 22806750
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||    
T  22806706 atcatattatttgtaagcattttgttgttgtatgttattaacttg 22806750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 33921176 - 33921268
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  |||||  || | |||||||| ||||||||||||||||||||| |   |||||||| ||||||||||    
T  33921176 tcaacgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttgtaggcattgtatagttgtatgctattaacttg 33921268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 457
Target Start/End: Original strand, 44596819 - 44596883
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||| |||| ||||||||||||||||  ||||| |||||||||| |||||||||| || |||||    
T  44596819 atttacattttatcatattatttgtagctattttaccgttgtatgctattaacttgggtgctgtg 44596883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 55228137 - 55228181
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatg 437  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||    
T  55228137 atttagatttaatcatattatttgtagacattttgtcgttgtatg 55228181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 448
Target Start/End: Original strand, 36184678 - 36184745
Alignment:
Q  381 aatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||| |||| | || ||||| |||||| ||||| ||||||||||| ||||||||| ||||||||||    
T  36184678 aatattatggtcactttgattttatcatactatttctaggcattttgtcgttgtatgctattaacttg 36184745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 1621469 - 1621406
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||| |||||||||| |||||||||||||||| |||||  ||||||||||  |||||||||    
T  1621469 tattctggtgatttagatttcatcatattatttgtagacattt--ccgttgtatgcaattaacttg 1621406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 408
Target Start/End: Original strand, 9643456 - 9643562
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||| ||||| || ||||||||||||||| || ||   |||||||||   |||||||||  ||| |||||||||||| |||| |||| ||||| |||    
T  9643456 tcatattaaaagatcaacttcagtcaatcacatattcaattaatgatttgaacatcaatgttatagatccggaagtatgagtattctggtgatttaaatt 9643555  T
Q  402 tgatcat 408  Q
    | |||||    
T  9643556 ttatcat 9643562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 443
Target Start/End: Complemental strand, 12199734 - 12199593
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||| | || ||||||||| | |||||| ||  ||| |||||| |  || | ||| ||||  |||||| ||||  |||||||  | ||||| |    
T  12199734 tcatattgaaatatcaacttcagtcagttacagattcaatcaaagatttgagcgtcgacgttacagattcggaagcatgagaattttggcgacttagaat 12199635  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttatta 443  Q
    | ||||||||||||||||| ||||| | ||||||||||||||    
T  12199634 ttatcatattatttgtaggtattttactgttgtatgttatta 12199593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 21554734 - 21554685
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| |||||||||||||||||||||| |||| || ||||||||||    
T  21554734 attttatcttattatttgtaggcattttgcccttgtttgctattaacttg 21554685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Complemental strand, 4142691 - 4142659
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtat 436  Q
    |||||||||||||||| ||||||||||||||||    
T  4142691 atcatattatttgtagacattttgccgttgtat 4142659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 37030431 - 37030475
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||| ||||| ||| ||||||| ||||||||||    
T  37030431 atcatattatttgtagacatttagccattgtatgctattaacttg 37030475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 47417841 - 47417877
Alignment:
Q  413 tttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  47417841 tttgtaggcattatgccgttatatgttattaacttga 47417877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 457
Target Start/End: Complemental strand, 28540944 - 28540792
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    ||||||||||  |||||||| |||||||| || ||  |||||||||| |  |||| |||||||| || |||| |||  ||||||||| |||||||||| |    
T  28540944 tattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattttggtgatttagatttca 28540845  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||| |||||| |||||||||| |||||||||| || |||||    
T  28540844 tcatattatttgtagacatttttccgttgtatgctattaacttgggtgctgtg 28540792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 8088253 - 8088107
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||||||||||||||||||||| ||  ||||||||||    |||| |||||||| ||  ||  | || |||| |||| |||||||||    
T  8088253 tcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagatt 8088154  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
      |||||||||||||||||||||||||| ||||||| ||||||||||    
T  8088153 atatcatattatttgtaggcattttgcctttgtatgctattaacttg 8088107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 14211277 - 14211420
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  ||||||||||    |||| |||||||| || |||| |||  |||| |||| |||||||||| |    
T  14211277 tattgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttca 14211376  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||| | |||||||| ||||||||||    
T  14211377 tcatattatttgtaggcatttttctgttgtatgctattaacttg 14211420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 2979344 - 2979201
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||| ||||| || |||||| |||||||| || ||  |||||||||| |  |||| |||||||| || |||| | |  |||| |||| |||||||||| |    
T  2979344 tattaaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggtattctggtgatttagatttca 2979245  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  2979244 tcatattatttgtaggcattgtgccgttgtatgctattaacttg 2979201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 447
Target Start/End: Complemental strand, 19103493 - 19103363
Alignment:
Q  317 agcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttg 416  Q
    |||||||| |||||||| || ||  |||||||||| |  ||||| ||||||| || |||| |||| ||||  ||| |||||||||| ||||||||||||     
T  19103493 agcttcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagtattccggtgatttagatttcatcatattattta 19103394  T
Q  417 taggcattttgccgttgtatgttattaactt 447  Q
    |||||||||| |||||||||| |||||||||    
T  19103393 taggcatttttccgttgtatgctattaactt 19103363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 24229771 - 24229670
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    ||||||||||||| |||| || ||| ||||||  || | |||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  24229771 tcaatgttgcagatccggtagcatggatatttctgtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctg 24229672  T
Q  456 tg 457  Q
    ||    
T  24229671 tg 24229670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 436
Target Start/End: Original strand, 7930243 - 7930358
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  ||||||||||||| ||||||| |||| ||||| ||||  |||| ||| |||||||||||||||||    
T  7930243 tcagtcaattacaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtatttaggtttcttaggttttatcatattatttgtagg 7930342  T
Q  421 cattttgccgttgtat 436  Q
    ||||||| ||||||||    
T  7930343 cattttgtcgttgtat 7930358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 14726499 - 14726356
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||||||| || ||  |||||||||| || |||| |||| ||| ||||||| |||   |||||||| | |||| ||| |    
T  14726499 tattgaaagatcggcatcagtcaatcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttta 14726400  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||| |||| |||  ||||||||||    
T  14726399 tcatattatttgtaggcattttgtcgttttataatattaacttg 14726356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 448
Target Start/End: Original strand, 39567321 - 39567463
Alignment:
Q  306 attgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgat 405  Q
    ||||||||| ||||||||| |||||||| || ||  ||||||||||    ||||  ||||||| || |||  |||  |||| |||| |||||||||| ||    
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttagatttcat 39567420  T
Q  406 catattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||    
T  39567421 catattatttgtagacattttgtcgttgtatgttattaccttg 39567463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 13007330 - 13007431
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||  ||| |||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  13007330 tcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctg 13007429  T
Q  456 tg 457  Q
    ||    
T  13007430 tg 13007431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 451
Target Start/End: Original strand, 10722901 - 10722957
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  10722901 ttagattttatcatattatttgtaggcatttttccgctgtatgttattaacttgagt 10722957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 38597898 - 38597990
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  |||||  || | |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  38597898 tcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 38597990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 31391791 - 31391648
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||| ||| || ||  |||||||||| |  |||| |||||||| || |||| |||| ||||| ||| | |||| ||| |    
T  31391791 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttaggtttta 31391692  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||| |||||||||||| | |||||||| ||||||||||    
T  31391691 tcatattatatgtaggcatttttctgttgtatgctattaacttg 31391648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 1409585 - 1409690
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    ||||||||| ||  ||||||||||||| ||| ||  ||||||||||| || | |||||||| ||||||||||||| ||  |||||||||||||| | |||    
T  1409585 caatgatttatgcgtcaatgttgcagatccgaaaacatgaatattttagtgacttagatttaatcatattatttgaagatattttgccgttgtacgctat 1409684  T
Q  442 taactt 447  Q
    ||||||    
T  1409685 taactt 1409690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 26825579 - 26825632
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  26825579 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 26825632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 34607182 - 34607113
Alignment:
Q  170 ttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctcata 239  Q
    |||||||||||||| |||| |||||||||||||||| | |||  ||||||||||||||| ||||||||||    
T  34607182 ttaagtgatgttttaatctcatccctttattttaatttgatggctgtaattcattctcatcattctcata 34607113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 9113712 - 9113620
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| ||  |||||| ||| | |||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  9113712 tcaacgttgcagatccggaagcatagatatttcggtgacttaagttttatcatattatttgtaggcatttttccgttgtatgctattaacttg 9113620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 444
Target Start/End: Complemental strand, 35921019 - 35920895
Alignment:
Q  320 ttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtag 419  Q
    |||| |||||||||||| ||  ||||||||||    |||| |||||||| ||||||| ||  ||||| | || |||| ||||| ||||||||||||||||    
T  35921019 ttcaatcaatcacagattcaatcaatgatttgaacgtcaacgttgcagatccggaagcatcgatattctagtgattttgattttatcatattatttgtag 35920920  T
Q  420 gcattttgccgttgtatgttattaa 444  Q
    |||||||| | ||||||| ||||||    
T  35920919 gcattttgtcattgtatgctattaa 35920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 447
Target Start/End: Complemental strand, 14082414 - 14082292
Alignment:
Q  325 tcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcatt 424  Q
    ||||| ||| |||||  ||| |||||| | ||||| |||||||| ||||||| |||  |||||   | | |||| ||| |||||||||||||||||||||    
T  14082414 tcaattacaaatccaaccaaagatttgggcatcaacgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggcatt 14082315  T
Q  425 ttgccgttgtatgttattaactt 447  Q
    ||| ||||||||| |||||||||    
T  14082314 ttgtcgttgtatgctattaactt 14082292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 11976883 - 11976830
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  11976883 ttaggttttatcatattatttgtaggcattttcccgttttatgttattaacttg 11976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 25980306 - 25980350
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  25980306 atcatattatttgtaggcattttgccgttatatgctattaacttg 25980350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 34945494 - 34945586
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||  ||| |||||||||||| ||||||||||| ||||||||| ||||||||||    
T  34945494 tcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgtcgttgtatgctattaacttg 34945586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 41630642 - 41630694
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||| |||||||||||||||| ||||||| ||||||||| |||||||||    
T  41630642 ttagattttatcatattatttgtagacattttgtcgttgtatgctattaactt 41630694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 8096448 - 8096393
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||| ||| |||||||||||||||||||||||||| || |||| ||||||||||    
T  8096448 atttaggttttatcatattatttgtaggcattttgccattttatgctattaacttg 8096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 448
Target Start/End: Original strand, 13421999 - 13422126
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  |||||||||||||  | |||| |||  ||||| ||| | ||| |||| |||||||||| ||||||    
T  13421999 tcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttcggtgacttatattttatcatattatatgtagg 13422098  T
Q  421 cattttgccgttgtatgttattaacttg 448  Q
    |||||| ||||| |||| ||||||||||    
T  13422099 catttttccgttttatgctattaacttg 13422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 35850849 - 35850992
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||| ||| || ||  ||||||||||||  |||| |||| ||| || |||| |||   |||| ||| | |||| ||| |    
T  35850849 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgtgcgtcaacgttgaagatccagaagcatgtgaatttcggtgacttaggtttta 35850948  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||| ||||| ||||||||| |||| ||||||||||    
T  35850949 tcatattatttgcaggcactttgccgttttatgctattaacttg 35850992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 436
Target Start/End: Complemental strand, 26878089 - 26878015
Alignment:
Q  362 ttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtat 436  Q
    ||||||| || |||| |||  ||||||||| | |||||||| ||||||||||||||||||| |||| ||||||||    
T  26878089 ttgcagatccagaagcatgggtattttggtgacttagattttatcatattatttgtaggcactttgtcgttgtat 26878015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 36258361 - 36258279
Alignment:
Q  155 tggcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctca 237  Q
    |||||||||| | ||||||||||| |||| |||||| || ||  ||||||||| | | |||||||| ||||||||||||||||    
T  36258361 tggcacatgagtcacttaagtgatattttaatcttacccattacttttaatctgacggttgtaatttattctcaccattctca 36258279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 6012081 - 6012033
Alignment:
Q  400 tttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||| | ||||| |||| ||||||||||    
T  6012081 tttgatcatattatttgtaggcattctaccgttttatgctattaacttg 6012033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 6216985 - 6217101
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattt-tgccgttgtatgtta 440  Q
    |||||||||| |  |||| ||||||||  |||||| |||  ||||| ||| | ||| |||| ||||||||||||||||||||||  | | ||||||| ||    
T  6216985 caatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaattttatcatattatttgtaggcatttaagtcattgtatgcta 6217084  T
Q  441 ttaacttgagttctgtg 457  Q
    ||||||||||| |||||    
T  6217085 ttaacttgagtgctgtg 6217101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 448
Target Start/End: Complemental strand, 10332530 - 10332442
Alignment:
Q  361 gttgcagacccggaagtatgaatattttggttattt-agatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| ||||||| |||| |||| || | |||| |||||| |||||||| ||||||||||||||| | || |||| ||||||||||    
T  10332530 gttgcagatccggaagcatgagtattctgatgattttagatttcatcatattttttgtaggcattttgtctttatatgctattaacttg 10332442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 447
Target Start/End: Original strand, 11192532 - 11192571
Alignment:
Q  408 tattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  11192532 tattatttgtaagcattttgtcgttgtatgttattaactt 11192571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 448
Target Start/End: Original strand, 15571573 - 15571680
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgcc-gttgtatgtta 440  Q
    |||||||||| || |||| |||||||| ||||||| |||| || ||  || | ||| |||| |||||||||||| ||| |||||| || |||||||| ||    
T  15571573 caatgatttgggtgtcaacgttgcagatccggaagcatgagtagttcagtgacttaaattttatcatattatttatagacatttttccagttgtatgcta 15571672  T
Q  441 ttaacttg 448  Q
    ||||||||    
T  15571673 ttaacttg 15571680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 449
Target Start/End: Original strand, 26578362 - 26578457
Alignment:
Q  356 tcaatgttgcagacccggaagta-tgaatattttggttatttagatttgatcatat-tatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    ||||||||||||| ||||||| | ||||||||| ||| | ||  |||| ||||||| | |||||||||||| ||||||| |||| |||||||||||    
T  26578362 tcaatgttgcagatccggaagcaatgaatatttcggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttga 26578457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 444
Target Start/End: Original strand, 11867784 - 11867838
Alignment:
Q  390 gttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    |||| |||||||| || |||||||||||||||||||||  |||||||| ||||||    
T  11867784 gttacttagattttattatattatttgtaggcattttgttgttgtatgctattaa 11867838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 30575038 - 30574956
Alignment:
Q  155 tggcacatgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctca 237  Q
    |||||||||| | |||||||||||||||| |||| |||| ||  || |||||  |||| || |||| ||||||||||||||||    
T  30575038 tggcacatgagtcacttaagtgatgttttaatctaatccattgcttctaatccgatgactgcaatttattctcaccattctca 30574956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 449
Target Start/End: Complemental strand, 37986061 - 37986007
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttga 449  Q
    ||||| || |||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  37986061 ttagaatttatcacattatttgtagacattttgtcgttgtatgctattaacttga 37986007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 38007498 - 38007559
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||| ||| |||||||||||||||||||||||||| || |||| |||||||||| || |||||    
T  38007498 ttaggttttatcatattatttgtaggcattttgcc-ttttatgctattaacttgggtgctgtg 38007559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 447
Target Start/End: Complemental strand, 8514613 - 8514548
Alignment:
Q  382 atattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||| | ||  |||| |||||||||||||||   |||||| |||||||||||||||||||    
T  8514613 atattttggtcacttttattttatcatattatttgtaaatattttgtcgttgtatgttattaactt 8514548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Original strand, 16758676 - 16758732
Alignment:
Q  391 ttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||| |||| |||||||||||||||  ||||||||||||| |||||||| |||||    
T  16758676 ttatttaaattttatcatattatttgta-acattttgccgttgcatgttattgacttg 16758732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 450
Target Start/End: Complemental strand, 31078381 - 31078312
Alignment:
Q  381 aatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgag 450  Q
    ||||||| ||| ||||| |||| || ||||||||| ||| ||||||| | ||||||| ||||||||||||    
T  31078381 aatatttaggtgatttaaattttataatattatttatagacattttgtcattgtatgctattaacttgag 31078312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 457
Target Start/End: Complemental strand, 17249189 - 17249034
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||| ||||||||||||||||| ||  ||||||||||    |||| |||||||| ||  ||| | || |||| |||| |||||||||    
T  17249189 tcatattgaaagatcagtttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttagatt 17249090  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
      |||||||||||||||| ||||||||||||||||| |||||||||| || |||||    
T  17249089 atatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtg 17249034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 32448661 - 32448512
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||||||||||||||||||||| ||  ||||||||||    |||| |||||||| || |||| | || |||| |||| |||||||||    
T  32448661 tcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagatt 32448562  T
Q  402 tg---atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
         |||||||||||||||||||||||||||||||||| ||||||||||    
T  32448561 attatatcatattatttgtaggcattttgccgttgtatgctattaacttg 32448512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 10237255 - 10237112
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| ||||||||| |||||||| || ||  ||||||||||    |||| |||||||| || |||| |||  |||| || | |||||||||| |    
T  10237255 tattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatgatttagatttca 10237156  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  10237155 tcatattatttgtaggcattttgtcgttgtatgctattaacttg 10237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 10929723 - 10929869
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    |||| |||||| | ||||||||||||||||||||| ||  ||||||||||   ||||| |||||||| ||||||| |||  |||| |||| ||||| |||    
T  10929723 tcatgttgaaaaatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgatttaaatt 10929822  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||||||| |||||||||||  |||| ||| ||||||||||    
T  10929823 ttatcatattatttataggcattttgttgttgaatgctattaacttg 10929869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 12647151 - 12647008
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||||| ||||||||||||||||||||| ||  | || |||||     |||||||| ||| ||||||| |||||||||||||| |||||||||    
T  12647151 tcatattgaaagatcagcttcagtcaatcacagattcaatcgatcatttggacgccaatgttgtagatccggaagcatgaatattttggtgatttagatt 12647052  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
       ||||||| |||||||||||||||| |||  ||| ||||||||||    
T  12647051 ---tcatattttttgtaggcattttgctgttagatgctattaacttg 12647008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 444
Target Start/End: Complemental strand, 29574670 - 29574528
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    |||||||||||||  |||||||||||||||||||| ||  ||||||||||     ||| |||||||| ||||||| ||||||||| || | |||||||||    
T  29574670 tcatattgaaagattagcttcagtcaatcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatgatttagatt 29574571  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    | |||||||| ||||||| ||||||| | || |||| ||||||    
T  29574570 tcatcatattttttgtagtcattttgtcattatatgctattaa 29574528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 448
Target Start/End: Original strand, 37416768 - 37416914
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||| | || ||  |||||||||||||| ||  ||||||||||  | ||||  |||||| |||||||| |||  |||| | || ||||| |||    
T  37416768 tcatattgaaatatcaactcgagtcaatcacagattcaatcaatgatttggatgtcaacattgcaggcccggaagcatgtgtattctagtgatttatatt 37416867  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||||||||||| ||||||||||||||||||| ||||||||    
T  37416868 ttatcatattatttgtagacattttgccgttgtatgttgttaacttg 37416914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 1421788 - 1421880
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||  ||||| ||| |||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  1421788 tcaacgttgcagatccggaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 1421880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 457
Target Start/End: Original strand, 3309006 - 3309158
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||| | || |||||| |||||||| || ||  |||||||||| |  | || |||||||| || |||| |||  |||| |||| ||||| |||| |    
T  3309006 tattgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggtattctggtgatttatatttca 3309105  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| || |||||    
T  3309106 tcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtg 3309158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 4904145 - 4904041
Alignment:
Q  344 atgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttatta 443  Q
    |||||||| || |||| |||||||| || |||| ||| |||||| ||| | |||||||| |||||||||||||||| ||||||| ||||||||| |||||    
T  4904145 atgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgacttagattttatcatattatttgtagacattttgtcgttgtatgctatta 4904046  T
Q  444 acttg 448  Q
    |||||    
T  4904045 acttg 4904041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 7646590 - 7646682
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||| ||||| ||| | |||  ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7646590 tcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 7646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 342 - 446
Target Start/End: Complemental strand, 29279572 - 29279468
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    ||||||||||||  ||||||||||||| ||||||  |||| | ||| ||| | ||| |||| ||||||||||||||||||||||||||||| |||| |||    
T  29279572 caatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgacttaaattttatcatattatttgtaggcattttgccgttttatgctat 29279473  T
Q  442 taact 446  Q
    |||||    
T  29279472 taact 29279468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 307 - 447
Target Start/End: Original strand, 41694684 - 41694824
Alignment:
Q  307 ttgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatc 406  Q
    |||||||| ||||||||| |||| ||| || ||  |||||||||| | ||||| ||||||||  | |||| ||| | ||| |||| | |||||||| |||    
T  41694684 ttgaaagatcagcttcagccaattacatattcaatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgacttagattttatc 41694783  T
Q  407 atattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  41694784 atattatttataggcattttgtcgttatatgttattaactt 41694824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 448
Target Start/End: Original strand, 37994401 - 37994488
Alignment:
Q  361 gttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| ||||||| | |||||||  ||| |||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||    
T  37994401 gttgcagatccggaagaaagaatattccggtgatttagattttatcatattatttgtaggcattttgctgttatatgctattaacttg 37994488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 4778865 - 4778966
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| |||  ||||| ||| | |||  ||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||    
T  4778865 tcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgttattaatttgggtgctg 4778964  T
Q  456 tg 457  Q
    ||    
T  4778965 tg 4778966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 25509017 - 25508964
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  25509017 ttagattttatcgtattatttgtaggcattttgccgttgtatgttattaacttg 25508964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 33585723 - 33585631
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||||||| |||| || || ||| |||||  ||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  33585723 tcaacgttgcagatccggaagcatgagtaattcggtgatttaagttttatcatattatttgtatgcattttgccgttgtatgctattaacttg 33585631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 23933658 - 23933515
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||  || |||||||||||||||||| ||  |||| |||||    |||| ||| || | | ||||| ||| ||| | |||| |||||||||| |    
T  23933658 tattgaaagttcaacttcagtcaatcacagattcaatcaattatttggacgtcaacgttacatatctggaagcatggataatctggtgatttagatttta 23933559  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||| |||||||||||||| | ||||||||||    
T  23933558 tcatattatttgtaggaattttgccgttgtaagctattaacttg 23933515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 321 - 448
Target Start/End: Complemental strand, 37876629 - 37876502
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||| ||| | ||||| |||||||| ||| ||| |||  ||||| ||| | ||| |||| |||||||||||||||||    
T  37876629 tcagtcaattacaaattcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtagg 37876530  T
Q  421 cattttgccgttgtatgttattaacttg 448  Q
    ||||||||||| ||||| ||||||||||    
T  37876529 cattttgccgtcgtatgctattaacttg 37876502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 447
Target Start/End: Complemental strand, 30400074 - 30399926
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattt------tggttatttag 398  Q
    |||||||||| || ||||||||||| ||| || ||  |||||||||| |  |||| |||||||| ||| ||| |||| |||||      | || | ||||    
T  30400074 tattgaaagatcaacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcagatccgaaagcatgagtatttgatttttagtgacttag 30399975  T
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  30399974 attttatcatattatttgtaggcattttgccgtcgtatgtcattaactt 30399926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 4100496 - 4100540
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  4100496 atcatattatttgtaggcattttgccgttgtatgatattaacttg 4100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 9169198 - 9169154
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  9169198 atcatattatttgtaggcattttgccgttgtatgctattaacttg 9169154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 31788568 - 31788660
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| ||| ||| |||| |||||  || | |||| ||| | |||||||||||||||||||||||||||||||| ||||||||||    
T  31788568 tcaacgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtaggcattttgccgttgtatgctattaacttg 31788660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 448
Target Start/End: Original strand, 36692014 - 36692078
Alignment:
Q  384 attttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| |||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  36692014 atttcggtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 36692078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 7677875 - 7677760
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    ||||||||||   ||||| |||||||| ||| ||| |||  |||||  || | |||| ||| |||||||||||| ||||||||||||||||||||| |||    
T  7677875 caatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattaggttttatcatattatttttaggcattttgccgttgtatgctat 7677776  T
Q  442 taacttgagttctgtg 457  Q
    ||||||| || |||||    
T  7677775 taacttgggtgctgtg 7677760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 443
Target Start/End: Complemental strand, 19595875 - 19595804
Alignment:
Q  372 ggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttatta 443  Q
    ||||| |||||||||||| | |||| ||||| ||||||||||||||||| |||||||| ||||||| |||||    
T  19595875 ggaagcatgaatattttgatgattttgattttatcatattatttgtaggtattttgcctttgtatgctatta 19595804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 451
Target Start/End: Original strand, 19597984 - 19598046
Alignment:
Q  388 tggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    |||| |||||||||| |||||||||||||||| |||||| |||||||||| |||||||||||||    
T  19597984 tggtgatttagattt-atcatattatttgtagacattttaccgttgtatgctattaacttgagt 19598046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 447
Target Start/End: Original strand, 38445326 - 38445369
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  38445326 atcatattatttgtaggcattttgccattgtatgttattaactt 38445369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 11985235 - 11985129
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||  || |||| |||||||| || |||| |||| |||||  || | |||| ||| ||||||||||||||||||||||||| |||||||  |||    
T  11985235 caatgatttaggtgtcaacgttgcagatccagaagaatgagtatttcagtgacttaggttttatcatattatttgtaggcattttgctgttgtatcctat 11985136  T
Q  442 taacttg 448  Q
    |||||||    
T  11985135 taacttg 11985129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 448
Target Start/End: Complemental strand, 12554223 - 12554077
Alignment:
Q  302 tcatattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatt 401  Q
    ||||||||||| | || ||||||||||| |||||| ||  |||||||||| || |  |  ||||| |   ||||| |||| |||||  || | |||| ||    
T  12554223 tcatattgaaatatcaacttcagtcaattacagattcaatcaatgatttgggtgtggacattgcatatttggaagcatgagtatttcagtaacttaggtt 12554124  T
Q  402 tgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    | |||||||||||||||||||||||| ||||||||| ||||||||||    
T  12554123 ttatcatattatttgtaggcattttgtcgttgtatgatattaacttg 12554077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 451
Target Start/End: Complemental strand, 19028953 - 19028807
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| |  ||||||||||  ||| || ||  |||||||||| |  |||| |||||| | || |||| ||| |||||| ||| | |||||||| |    
T  19028953 tattgaaagatcgacttcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttgcaaatccagaagcatggatatttcggtaacttagatttta 19028854  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    ||||| ||||||||||||||||  |||| |||| |||||||||||||    
T  19028853 tcatactatttgtaggcattttttcgttttatgctattaacttgagt 19028807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 451
Target Start/End: Complemental strand, 28533905 - 28533847
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    |||| ||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  28533905 atttggattttatcatattatttgtaggtattttgtcgttgtatgctattaacttgagt 28533847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 6358842 - 6358777
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||| |||||||||| ||||||||||||||| | |||||| ||||||||| ||||||||||    
T  6358842 tattatggtgatttagattttatcatattatttgtacgtattttgtcgttgtatgctattaacttg 6358777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 18763619 - 18763672
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  18763619 ttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 18763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 31128768 - 31128692
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgtt 432  Q
    |||| |||||||| ||||||| |||| |||||  || | ||| |||| |||||||||||||||||||||||||||||    
T  31128768 tcaacgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtaggcattttgccgtt 31128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 5427871 - 5427756
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||| |||||  |||| |||||||| |||||||||||  |||||  || | |||| ||| ||||||||||||| | |||||||  ||||||||| |||    
T  5427871 caatgacttgtgcgtcaacgttgcagatccggaagtatgtgtatttcagtgacttaggttttatcatattatttgcaagcattttatcgttgtatgctat 5427772  T
Q  442 taacttgagttctgtg 457  Q
    ||||||| || |||||    
T  5427771 taacttgggtgctgtg 5427756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 14955678 - 14955732
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||| |||||||||||||||| ||||||  | |||||||||||||||||    
T  14955678 atttagattttatcatattatttgtagacattttatcattgtatgttattaactt 14955732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 14423464 - 14423517
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgttgtat 436  Q
    ||||| ||||| |||||||| |||||||||| | ||||||||||||||||||||    
T  14423464 tatttaggttagttagattttatcatattatatttaggcattttgccgttgtat 14423517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 18107699 - 18107646
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| || |||||||||||||||||||||||| |||| ||| |||||||||||    
T  18107699 ttagaattaatcatattatttgtaggcattttgtcgttttatattattaacttg 18107646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 43397067 - 43397014
Alignment:
Q  395 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| ||||||||||||||| ||||||||||||| |||| ||||||||||    
T  43397067 ttaggttttatcatattatttgtacgcattttgccgttttatgctattaacttg 43397014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 19062279 - 19062243
Alignment:
Q  412 atttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||||||||||||||||||| ||||||||||    
T  19062279 atttgtaggcattttgccgttgtatgctattaacttg 19062243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 27097347 - 27097303
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||    
T  27097347 atcatattatttgtaggaattttgccgttgtatactattaacttg 27097303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 33760133 - 33760089
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||    
T  33760133 atcatattatttgtaggcattttgctgttgtaagctattaacttg 33760089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 448
Target Start/End: Original strand, 1415618 - 1415761
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || ||||||||| ||| || ||  |||||||||| |  |||| |||| ||| ||||||| |||   |||| ||| | |||| ||| |    
T  1415618 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 1415717  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||| |||||||||||||||||| |||||  ||| ||||||||||    
T  1415718 tcagattatttgtaggcattttaccgtttaatgctattaacttg 1415761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 448
Target Start/End: Complemental strand, 12677489 - 12677347
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| | || | ||||||| ||| || ||  |||||||||| |  |||| |||| ||| ||||||| |||   |||||||| | |||| ||| |    
T  12677489 tattgaaagatcggcataagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttta 12677390  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||| ||||||||||| ||||| |||| ||||||||||    
T  12677389 tcatattatt-gtaggcatttttccgttttatgctattaacttg 12677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 17994675 - 17994636
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgt 438  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  17994675 attttatcatattatttgtaggcattttgccattgtatgt 17994636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 31210568 - 31210521
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccg 430  Q
    ||||| ||| |||||| ||| |||||||||||||||||||||||||||    
T  31210568 tatttcggtgatttaggttttatcatattatttgtaggcattttgccg 31210521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 442
Target Start/End: Original strand, 33140582 - 33140625
Alignment:
Q  399 atttgatcatattatttgtaggcattttgccgttgtatgttatt 442  Q
    |||| ||||||||||||||||||||||||  |||||||||||||    
T  33140582 atttaatcatattatttgtaggcattttgtggttgtatgttatt 33140625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 447
Target Start/End: Original strand, 41327899 - 41327942
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaactt 447  Q
    |||||||||||||||||||||||| | ||||||| |||||||||    
T  41327899 atcatattatttgtaggcattttggcattgtatgctattaactt 41327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 444
Target Start/End: Original strand, 42577245 - 42577308
Alignment:
Q  381 aatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    ||||||| ||| | || ||||||||||||||||||||||| |||||| |||| |||| ||||||    
T  42577245 aatatttcggtcactttgatttgatcatattatttgtaggtattttgtcgttttatgctattaa 42577308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 447
Target Start/End: Complemental strand, 29173722 - 29173614
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatt---tgtaggcattttgccgttgtatgt 438  Q
    |||| ||||| || |||| |||||||| ||| ||| |||  ||||| ||| | |||||||| |||||||||||   |||| ||||||||  |||||||||    
T  29173722 caattatttgggtgtcaacgttgcagatccgaaagcatgggtatttcggtgacttagattttatcatattattatttgtatgcattttgttgttgtatgt 29173623  T
Q  439 tattaactt 447  Q
    |||||||||    
T  29173622 tattaactt 29173614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 34128630 - 34128580
Alignment:
Q  398 gatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| |||||||||||| ||||||||||| ||  ||||||||||||||||    
T  34128630 gattttatcatattatttataggcattttgtcgcagtatgttattaacttg 34128580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 457
Target Start/End: Original strand, 35220495 - 35220541
Alignment:
Q  411 tatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||| ||||||||| |||||||||| || |||||    
T  35220495 tatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtg 35220541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 4264632 - 4264664
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtat 436  Q
    |||||||||||||||||||||||| ||||||||    
T  4264632 atcatattatttgtaggcattttgtcgttgtat 4264664  T

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Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 449
Target Start/End: Complemental strand, 21570318 - 21570282
Alignment:
Q  413 tttgtaggcattttgccgttgtatgttattaacttga 449  Q
    |||||||||||| |||||||||||| |||||||||||    
T  21570318 tttgtaggcattatgccgttgtatgctattaacttga 21570282  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 457
Target Start/End: Original strand, 33923782 - 33923918
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| |  |||| |||| ||| ||||||| |||   |||| ||| | |||| ||| ||||||||||||| |||    
T  33923782 tcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgcagg 33923881  T
Q  421 cattttgccgttgtatgttattaacttgagttctgtg 457  Q
    | ||||| |||| |||| |||||||||| || |||||    
T  33923882 cgttttgtcgttttatgctattaacttgggtgctgtg 33923918  T

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Target: scaffold0347 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 6095 - 6203
Alignment:
Q  319 cttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgta 418  Q
    ||||||||||||||| || ||  ||||||||||  | ||||||||||||| ||||||| |||  |||| |||| |||||||||| |||||||||||||||    
T  6095 cttcagtcaatcacatattcaatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtattctggtgatttagattttatcatattatttgta 6194  T
Q  419 ggcattttg 427  Q
    | |||||||    
T  6195 gacattttg 6203  T

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Target: scaffold0127 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 457
Target Start/End: Original strand, 15600 - 15695
Alignment:
Q  362 ttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||| ||||||| ||| |||||| ||| | |||| ||| ||||||||||||||||||||||||||||| |||| |||||||||| || |||||    
T  15600 ttgcagatccggaagcatggatatttcggtgacttaggttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgctgtg 15695  T

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Target: scaffold0050 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 451
Target Start/End: Complemental strand, 66064 - 65934
Alignment:
Q  321 tcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtagg 420  Q
    ||||||||| ||| || ||  |||||||||| ||  ||| |||||||| ||||||| |||  ||||| ||| | |||  ||| |||||||||||||||||    
T  66064 tcagtcaattacaaattcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtagg 65965  T
Q  421 cattttgccgttgtatgttattaacttgagt 451  Q
    ||||||| ||||||||| |||||||||||||    
T  65964 cattttgtcgttgtatgctattaacttgagt 65934  T

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Target: scaffold0884 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 1933 - 1868
Alignment:
Q  383 tattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||| ||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  1933 tatttcggtgatttaggttttatcatattatttgtaggcattttgctgttgtatgttattaacttg 1868  T

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Target: scaffold0088 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 457
Target Start/End: Original strand, 50878 - 50979
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagttctg 455  Q
    |||| |||||||| ||||||| ||| |||||| ||| | |||  ||| |||||||||||||||||||||||||| ||||||| |||||||||| || |||    
T  50878 tcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctg 50977  T
Q  456 tg 457  Q
    ||    
T  50978 tg 50979  T

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Target: scaffold0888 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 444
Target Start/End: Complemental strand, 1716 - 1577
Alignment:
Q  305 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 404  Q
    |||||||||| || |||||| |||||||| || ||  |||||||||| ||||||| || | ||| || |||  |||  |||| |||| |||||||||| |    
T  1716 tattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggtatcaacgtagtagatccagaaacatgggtattctggtgatttagatttta 1617  T
Q  405 tcatattatttgtaggcattttgccgttgtatgttattaa 444  Q
    ||||||||||||||||||||||  |||| |||| ||||||    
T  1616 tcatattatttgtaggcattttatcgttatatgctattaa 1577  T

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Target: scaffold0017 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 451
Target Start/End: Complemental strand, 32734 - 32639
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttgagt 451  Q
    |||| |||||||| | ||||| |||| ||||| ||| | |||||||| |||||||||||||||||||||||| || |||||  |||||||||||||    
T  32734 tcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtaggcattttgtcgctgtatactattaacttgagt 32639  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 71301 - 71195
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||| | || |||| |||||||| ||||||| |||  ||||||| | | |||||||| || |||||||||||||||||||||  |||||||| |||    
T  71301 caatgattggggtgtcaacgttgcagatccggaagcatgggtattttgatgacttagattttattatattatttgtaggcattttgttgttgtatgctat 71202  T
Q  442 taacttg 448  Q
    |||||||    
T  71201 taacttg 71195  T

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Target: scaffold0026 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 71809 - 71756
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  71809 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtg 71756  T

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Target: scaffold0445 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 448
Target Start/End: Original strand, 1474 - 1538
Alignment:
Q  384 attttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| ||| |||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  1474 atttcggtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 1538  T

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Target: scaffold0121 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 433
Target Start/End: Complemental strand, 31271 - 31184
Alignment:
Q  346 gatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttg 433  Q
    |||||| | |||||||||||||| ||||||| |||  ||||| ||| | |||||||| |||||||||||| ||||||||||| |||||    
T  31271 gatttgagcatcaatgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttataggcattttgtcgttg 31184  T

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Target: scaffold0262 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 437
Target Start/End: Complemental strand, 1820 - 1725
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatg 437  Q
    |||||||||| | | ||| |||||||| ||||||| |||  ||||| | | | ||| |||| ||||||||||||||||||||||| ||||||||||    
T  1820 caatgatttgggcaccaacgttgcagatccggaagcatgggtatttcgatgacttatattttatcatattatttgtaggcattttaccgttgtatg 1725  T

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Target: scaffold0603 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 7865 - 7909
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||    
T  7865 atcatattatttgtagggattttgctattgtatgttattaacttg 7909  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 93209 - 93301
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||| |||||||| || ||| ||||  |||| |||| ||||| |||| |||||||| |||||||||||||||  ||||| || ||||||||||    
T  93209 tcaacgttgcagatccagaaatatgggtattctggtgatttaaattttatcatattgtttgtaggcattttgttgttgtgtgctattaacttg 93301  T

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Target: scaffold0634 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 8600 - 8715
Alignment:
Q  342 caatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttgccgttgtatgttat 441  Q
    |||||||||| |  |||| |||||||| | ||||| |||  ||||| ||| | |||  ||| ||||||||| | |||||||||||||||||||||| |||    
T  8600 caatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatgttttatcatattaatcgtaggcattttgccgttgtatgctat 8699  T
Q  442 taacttgagttctgtg 457  Q
    ||| ||| || |||||    
T  8700 taagttgggtactgtg 8715  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 36964 - 37019
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtatgttattaacttg 448  Q
    |||||||||| ||||||||||||||||| ||||||  ||| |||| ||||||||||    
T  36964 atttagattttatcatattatttgtaggtattttgatgttttatgctattaacttg 37019  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Complemental strand, 19032 - 18989
Alignment:
Q  393 atttagatttgatcatattatttgtaggcattttgccgttgtat 436  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||    
T  19032 atttggattttatcatattatttgtatgcattttgccgttgtat 18989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 427
Target Start/End: Original strand, 4274 - 4345
Alignment:
Q  356 tcaatgttgcagacccggaagtatgaatattttggttatttagatttgatcatattatttgtaggcattttg 427  Q
    |||| |||||||| ||| |||  ||| ||||||| | |||||||||| |||||||||||||||| |||||||    
T  4274 tcaacgttgcagatccgaaagcttgagtattttgatgatttagattttatcatattatttgtagacattttg 4345  T

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Target: scaffold0517 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 4682 - 4760
Alignment:
Q  161 atgactaacttaagtgatgttttcatcttatccctttattttaatcttatgattgtaattcattctcaccattctcata 239  Q
    ||||||||||||  |  |||||| ||||||||||||  ||||||||| |||  |  |||||||||||||||||||||||    
T  4682 atgactaacttacattgtgttttaatcttatcccttgcttttaatctaatggctacaattcattctcaccattctcata 4760  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 9981 - 9928
Alignment:
Q  404 atcatattatttgtaggcattttgccgttgtatgttattaacttgagttctgtg 457  Q
    ||||||||||||||||||||||| ||||| |||| |||| ||||| || |||||    
T  9981 atcatattatttgtaggcatttttccgttttatgctattgacttgggtgctgtg 9928  T

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