View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12967_low_7 (Length: 408)

Name: NF12967_low_7
Description: NF12967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12967_low_7
NF12967_low_7
[»] chr5 (19 HSPs)
chr5 (18-391)||(35287715-35288097)
chr5 (234-330)||(9788631-9788727)
chr5 (234-330)||(26171429-26171525)
chr5 (234-330)||(40380778-40380874)
chr5 (234-328)||(16407997-16408091)
chr5 (241-330)||(29721044-29721133)
chr5 (242-374)||(18467422-18467554)
chr5 (241-380)||(534428-534567)
chr5 (241-330)||(42427841-42427930)
chr5 (256-329)||(27449229-27449302)
chr5 (242-330)||(6745806-6745894)
chr5 (242-330)||(34478872-34478960)
chr5 (242-329)||(33790722-33790809)
chr5 (259-329)||(31397602-31397672)
chr5 (234-330)||(16545099-16545198)
chr5 (256-329)||(34842023-34842096)
chr5 (242-330)||(10750436-10750524)
chr5 (242-330)||(15356302-15356390)
chr5 (242-330)||(23665784-23665872)
[»] chr3 (25 HSPs)
chr3 (234-388)||(23199490-23199644)
chr3 (242-374)||(43226794-43226926)
chr3 (241-330)||(5259732-5259821)
chr3 (242-374)||(4309919-4310051)
chr3 (234-330)||(4600129-4600225)
chr3 (234-330)||(10056907-10057003)
chr3 (234-330)||(10061351-10061447)
chr3 (234-330)||(10063573-10063669)
chr3 (234-330)||(10065795-10065891)
chr3 (241-380)||(22834368-22834507)
chr3 (241-328)||(37407358-37407445)
chr3 (234-330)||(6717175-6717271)
chr3 (234-326)||(10059129-10059221)
chr3 (234-330)||(10209863-10209959)
chr3 (242-329)||(5898126-5898213)
chr3 (241-380)||(7762940-7763079)
chr3 (253-380)||(30844903-30845030)
chr3 (241-330)||(7769271-7769360)
chr3 (241-330)||(23634161-23634250)
chr3 (241-330)||(32891759-32891848)
chr3 (242-330)||(456624-456712)
chr3 (242-374)||(10957732-10957864)
chr3 (256-368)||(15822057-15822169)
chr3 (241-324)||(9635539-9635622)
chr3 (242-329)||(32479747-32479834)
[»] chr6 (14 HSPs)
chr6 (241-330)||(5408479-5408568)
chr6 (241-330)||(5412804-5412893)
chr6 (234-330)||(16553338-16553434)
chr6 (234-330)||(16629894-16629990)
chr6 (234-330)||(16651598-16651694)
chr6 (234-330)||(34165546-34165642)
chr6 (241-368)||(30444030-30444157)
chr6 (241-328)||(12936704-12936791)
chr6 (256-330)||(25462918-25462992)
chr6 (256-330)||(26944276-26944350)
chr6 (241-330)||(12157988-12158077)
chr6 (242-330)||(3395134-3395222)
chr6 (242-322)||(26932024-26932104)
chr6 (242-330)||(33309627-33309715)
[»] chr4 (13 HSPs)
chr4 (234-330)||(7123370-7123466)
chr4 (234-330)||(8394080-8394176)
chr4 (241-380)||(5872484-5872623)
chr4 (234-330)||(5136754-5136850)
chr4 (241-368)||(12743300-12743427)
chr4 (309-387)||(3501872-3501950)
chr4 (243-330)||(4588623-4588710)
chr4 (241-380)||(52094722-52094861)
chr4 (242-320)||(5207083-5207161)
chr4 (242-330)||(22782190-22782278)
chr4 (242-329)||(12402550-12402637)
chr4 (241-330)||(10113649-10113738)
chr4 (243-323)||(47563548-47563628)
[»] chr8 (7 HSPs)
chr8 (241-330)||(34255916-34256005)
chr8 (256-380)||(4732342-4732466)
chr8 (241-380)||(5591554-5591693)
chr8 (268-327)||(32429287-32429346)
chr8 (242-330)||(15069360-15069448)
chr8 (242-329)||(35744797-35744884)
chr8 (256-329)||(18853770-18853843)
[»] chr7 (15 HSPs)
chr7 (234-330)||(6593943-6594039)
chr7 (234-330)||(18391581-18391677)
chr7 (242-330)||(36197-36285)
chr7 (256-380)||(47675497-47675621)
chr7 (241-330)||(48490074-48490163)
chr7 (242-330)||(7093914-7094002)
chr7 (242-330)||(7351104-7351192)
chr7 (242-330)||(24749334-24749422)
chr7 (242-330)||(38394733-38394821)
chr7 (241-380)||(6570656-6570795)
chr7 (241-328)||(13289954-13290041)
chr7 (242-329)||(16884334-16884421)
chr7 (256-329)||(49091084-49091157)
chr7 (242-330)||(22135550-22135638)
chr7 (242-330)||(40550577-40550665)
[»] chr1 (11 HSPs)
chr1 (241-380)||(31657873-31658012)
chr1 (241-330)||(3157332-3157421)
chr1 (242-374)||(28203108-28203240)
chr1 (229-380)||(50168710-50168860)
chr1 (242-374)||(27338542-27338674)
chr1 (256-380)||(28222781-28222905)
chr1 (256-330)||(8348518-8348592)
chr1 (242-330)||(20300869-20300957)
chr1 (242-330)||(28841160-28841248)
chr1 (242-314)||(47178100-47178172)
chr1 (242-330)||(51750775-51750863)
[»] scaffold0016 (1 HSPs)
scaffold0016 (241-326)||(115272-115357)
[»] chr2 (6 HSPs)
chr2 (242-330)||(22405383-22405471)
chr2 (242-328)||(21520149-21520235)
chr2 (242-329)||(19348684-19348771)
chr2 (261-330)||(42019299-42019368)
chr2 (241-329)||(34574612-34574700)
chr2 (242-330)||(36560594-36560682)
[»] scaffold0219 (1 HSPs)
scaffold0219 (241-330)||(26826-26915)
[»] scaffold0028 (1 HSPs)
scaffold0028 (242-329)||(149548-149635)
[»] scaffold1991 (1 HSPs)
scaffold1991 (256-329)||(1028-1101)
[»] scaffold0140 (1 HSPs)
scaffold0140 (242-330)||(22864-22952)
[»] scaffold0011 (1 HSPs)
scaffold0011 (242-330)||(34288-34376)


Alignment Details
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 18 - 391
Target Start/End: Complemental strand, 35288097 - 35287715
Alignment:
Q  18 gttgatagatgaaataataaagataattgaaaattcacata--tatt----tagagacaatgattttattttacgttgtgaaaggagaagatataagtga 111  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35288097 gttgatagacgaaataataaagataattgaaaattcacatacatattaacgtagagacaatgattttattttacgttgtgaaaggagaagatataagtga 35287998  T
Q  112 tcttgattgaacaaaagtgtaca---ttgacactgaaggttaaggttgcggtgtcggctaccgtatcataagtacacaagagacaaagttctaagagaag 208  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||    
T  35287997 tcttgattgaacaaaagtgtacaatattgacactgaaggttaaggttgcggtgtcggctatcatgtcataagtacacaagagaaaaagttctaagagaag 35287898  T
Q  209 tcatgaaggagacaacggcaacgtggatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattcta 308  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||| || ||||||||||| ||||||| ||||||||    
T  35287897 tcatgaaggagacaacgacaacgtggatgtgctcaaagttgaattcgttgtatatgaccaagtcgttaactcatagacaattcatgaaacagcaattcta 35287798  T
Q  309 atcatttaagatggtggagtcatgaaccatcagagagcaatcaacgaagttcaacaaaattcttgacgatttagtgaacaatg 391  Q
    |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35287797 atcatttaggatggtggagtcatgaactatcagagagcaatcagcgaagttcaacaaaattcttgacgatttagtgaacaatg 35287715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Complemental strand, 9788727 - 9788631
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| ||||||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  9788727 gatatggtcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 9788631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 26171429 - 26171525
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| ||||||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  26171429 gatatggtcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 26171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 40380778 - 40380874
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| ||||||||||||| || |||||| |||| ||||| |||||||||||||||    
T  40380778 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcattcaagatggtggagtca 40380874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 16407997 - 16408091
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagt 328  Q
    |||||| ||||||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||    
T  16407997 gatatgatcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagt 16408091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 29721044 - 29721133
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  29721044 tcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 29721133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 374
Target Start/End: Original strand, 18467422 - 18467554
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcag 341  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||||||||||   |||||||     
T  18467422 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaagaccatcat 18467521  T
Q  342 agagcaatcaacgaagttcaacaaaattcttga 374  Q
     |||||||  ||| ||||||||||||| |||||    
T  18467522 ggagcaatttacggagttcaacaaaatccttga 18467554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 380
Target Start/End: Original strand, 534428 - 534567
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | || ||||||||||| ||||| || | | |||| |||||||| || |||||| |||| ||||| |||||||||||||||   ||| | |    
T  534428 tcaaagttggagtcattgtatatgaccaagtctttggttgataggcaattccttaagcaacaactctactcattcaagatggtggagtcaaagaccgtga 534527  T
Q  341 gagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
      ||||||| |||| ||||||||||||| ||||| |||||    
T  534528 tggagcaattaacggagttcaacaaaatacttgatgattt 534567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 42427930 - 42427841
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | || ||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  42427930 tcaaagttgtagtcattgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctattcattcaagatggtggagtca 42427841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 27449302 - 27449229
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||||||||| || |||||| |||| ||| || |||| |||||| |||| ||||| ||||||||||||||    
T  27449302 ttgtatatgacaaaatctttagctcataggcaactcttgaagcaacaactctattcattcaagatggtggagtc 27449229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 6745806 - 6745894
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||||||||||    
T  6745806 caaagttgtaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtca 6745894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 34478960 - 34478872
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || |||||||||| || |||||| |||| ||||| | |||||| ||||||    
T  34478960 caaagttggaatctttgtatatgacaaagtctttggctcatcgacaattcctaaagcaacaactctactcattcaggatggtagagtca 34478872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 33790809 - 33790722
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||| | || ||||||||||| || || || ||| |||||||| || |||| |||||| |||| ||||| ||||||||||||||    
T  33790809 caaagttggagtcattgtatatgacgaaatctttggctcatagacaactcttgaagcaacaactctactcattcaagatggtggagtc 33790722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 31397602 - 31397672
Alignment:
Q  259 tatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    ||||||||||| || || ||| |||| ||| || |||| |||||| |||| ||||||||||||||||||||    
T  31397602 tatatgacaaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatggtggagtc 31397672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 16545099 - 16545198
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaa---gtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||   ||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  16545099 gatatggtctaagttggaatcgttgtatatgaccaacaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 16545198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 34842096 - 34842023
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    ||||| |||||||| || ||||||  |||||||||  ||||| ||||| |||| ||||| ||||||||||||||    
T  34842096 ttgtacatgacaaaatctttagctcgtagacaatttttgaaataacaactctactcattcaagatggtggagtc 34842023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 10750436 - 10750524
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  10750436 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 10750524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 15356390 - 15356302
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  15356390 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 15356302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 23665784 - 23665872
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  23665784 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 23665872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 388
Target Start/End: Complemental strand, 23199644 - 23199490
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatga 333  Q
    |||||| ||||||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||||||||| |||||||||||||||       
T  23199644 gatatggtcaaagttggaatcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctaatcattcaagatggtggagtcaaag 23199545  T
Q  334 accatcagagagcaatcaacgaagttcaacaaaattcttgacgatttagtgaaca 388  Q
    ||||| |  |||||||   || ||||||||||||| ||||| ||||||| |||||    
T  23199544 accatgatggagcaattggcggagttcaacaaaatccttgatgatttagagaaca 23199490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 374
Target Start/End: Original strand, 43226794 - 43226926
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcag 341  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| |||||||||||||||   |||||||     
T  43226794 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaagatggtggagtcaaagaccatcat 43226893  T
Q  342 agagcaatcaacgaagttcaacaaaattcttga 374  Q
     ||||||   ||||||||||||||||| |||||    
T  43226894 ggagcaacttacgaagttcaacaaaatccttga 43226926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 5259821 - 5259732
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  5259821 tcaaagttggagtcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 5259732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 374
Target Start/End: Complemental strand, 4310051 - 4309919
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcag 341  Q
    |||||||||| || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||||||||||   |||||||     
T  4310051 caaagttgaaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaagaccatcat 4309952  T
Q  342 agagcaatcaacgaagttcaacaaaattcttga 374  Q
     ||||||   ||| ||||||||||||| |||||    
T  4309951 ggagcaacttacggagttcaacaaaatccttga 4309919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Complemental strand, 4600225 - 4600129
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  4600225 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 4600129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 10056907 - 10057003
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  10056907 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 10057003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 10061351 - 10061447
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  10061351 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 10061447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 10063573 - 10063669
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  10063573 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 10063669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 10065795 - 10065891
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  10065795 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 10065891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 380
Target Start/End: Complemental strand, 22834507 - 22834368
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | || ||||||||||  ||||| || ||| |||| |||||||| || |||||| |||| ||||| ||||||||||||| |   ||| | |    
T  22834507 tcaaagttggagtcattgtatatgatcaagtctttggctcataggcaattccttaagcaacaactctattcattcaagatggtggagttaaagaccgtga 22834408  T
Q  341 gagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
     ||||||||  ||| ||||||||||||||||||| |||||    
T  22834407 cagagcaattgacggagttcaacaaaattcttgatgattt 22834368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 37407358 - 37407445
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagt 328  Q
    ||||||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||    
T  37407358 tcaaagttggagtcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagt 37407445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 6717175 - 6717271
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| ||||||| ||||| || | |||| |||| ||||| |||||||||||||||    
T  6717175 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacatttccttaagcgacaactctactcattcaagatggtggagtca 6717271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 10059129 - 10059221
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtgga 326  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||    
T  10059129 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtgga 10059221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 10209863 - 10209959
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | || ||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  10209863 gatatggtctaagttggaatcattgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 10209959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 5898126 - 5898213
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||| | || |||||| |||| ||||||||||||||||||||    
T  5898126 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcttaaagcaacaactctactcatttaagatggtggagtc 5898213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 380
Target Start/End: Original strand, 7762940 - 7763079
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | || || |||||||| ||||| || ||| |||  |||||| | || |||||| |||| |||||||||||||||||||||   ||| | |    
T  7762940 tcaaagttggagtcattatatatgaccaagtctttggctcataagcaattctttaagcaacaactctattcatttaagatggtggagtcaaagaccgtga 7763039  T
Q  341 gagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
      ||||||| |||| ||||||||||||| ||||| |||||    
T  7763040 tggagcaattaacggagttcaacaaaatccttgatgattt 7763079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 30845030 - 30844903
Alignment:
Q  253 tcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcagagagcaatcaa 352  Q
    ||||||||||| || |||||||| ||| ||||||||||| | | |||| || |||| ||||| |  |||||||| ||   |||||||| ||||||||  |    
T  30845030 tcgttgtatataaccaagtcattggctcatagacaattcatcatacaaaaactctactcattcagaatggtggaatctaaaaccatcatagagcaattga 30844931  T
Q  353 cgaagttcaacaaaattcttgacgattt 380  Q
    | |||||||||||||| ||||| |||||    
T  30844930 caaagttcaacaaaatccttgatgattt 30844903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 7769271 - 7769360
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | || ||||||||||||||||| || ||| || | |||||||| ||  ||||| |||| ||||| |||||||||||||||    
T  7769271 tcaaagttggagtctttgtatatgacaaagtctttggctcatcggcaattcctaaagaaacaactctactcattcaagatggtggagtca 7769360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 23634161 - 23634250
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | || ||||||||||||||||| || ||| || | ||||| || || |||||| |||| ||||| |||||||||||||||    
T  23634161 tcaaagttggaatctttgtatatgacaaagtctttggctcatcggcaatttctaaagcaacaactctagtcattcaagatggtggagtca 23634250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 32891759 - 32891848
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | || ||||||||||| || || || ||| |||| |||||||| || |||||| |||| ||||||||| |||||||||||    
T  32891759 tcaaagttggagtcattgtatatgaccaaatctttggctcataggcaattccttaagcaacaactctactcatttaaggtggtggagtca 32891848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 456624 - 456712
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| |||||||| ||||||    
T  456624 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaagatggtagagtca 456712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 374
Target Start/End: Complemental strand, 10957864 - 10957732
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcag 341  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    ||||||     
T  10957864 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtcaaaggccatcat 10957765  T
Q  342 agagcaatcaacgaagttcaacaaaattcttga 374  Q
     ||||||   ||||||||||||||||| |||||    
T  10957764 ggagcaacttacgaagttcaacaaaatccttga 10957732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 15822169 - 15822057
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcagagagcaatcaacga 355  Q
    ||||||||||| ||||| |||||| |||   ||||||| || |||||| |||| || ||||| ||||||||||||   ||| | | |||||||  |||||    
T  15822169 ttgtatatgactaagtctttagctcatatgtaattcctaaagcaacaactctactcgtttaaaatggtggagtcaaagaccttaacagagcaactaacga 15822070  T
Q  356 agttcaacaaaat 368  Q
    |||||||||||||    
T  15822069 agttcaacaaaat 15822057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 9635622 - 9635539
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtg 324  Q
    ||||||||| |  ||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||    
T  9635622 tcaaagttggagccgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaaatctactcattcaagatggtg 9635539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 32479834 - 32479747
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||| | || ||||||||||| || || || ||| |||| ||| || |||| |||||| |||| ||||||||||||||||||||    
T  32479834 caaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatggtggagtc 32479747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 5408568 - 5408479
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | |||||||||||||||||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  5408568 tcaaagttggagtcgttgtatatgacaaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 5408479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 5412893 - 5412804
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | |||||||||||||||||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  5412893 tcaaagttggagtcgttgtatatgacaaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 5412804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 16553338 - 16553434
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| ||||||||||||| || |||||| |||| ||||| |||||||||||||||    
T  16553338 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcattcaagatggtggagtca 16553434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 16629894 - 16629990
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| ||||||||||||| || |||||| |||| ||||| |||||||||||||||    
T  16629894 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcattcaagatggtggagtca 16629990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 16651598 - 16651694
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| ||||||||||||| || |||||| |||| ||||| |||||||||||||||    
T  16651598 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcattcaagatggtggagtca 16651694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 34165546 - 34165642
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  34165546 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 34165642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 30444030 - 30444157
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | |||||||||||||| ||||| || ||| |||||||||| || || | |||| |||| |||||||||||| |||| | ||  |||||||    
T  30444030 tcaaagttggagtcgttgtatatgaccaagtctttggctcatagacaatttctaaagccacaactctactcatttaagatgatggatttatacaccatca 30444129  T
Q  341 gagagcaatcaacgaagttcaacaaaat 368  Q
      ||||||   |||||||||||||||||    
T  30444130 tggagcaacttacgaagttcaacaaaat 30444157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 12936791 - 12936704
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagt 328  Q
    ||||||||| | || |||||||||||||| || || ||| || | |||||||| || |||||| |||| |||||||||||||||||||    
T  12936791 tcaaagttggagtctttgtatatgacaaaatctttggctcattggcaattcctaaagcaacaactctactcatttaagatggtggagt 12936704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 25462992 - 25462918
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||||||||||| |  ||| || | |||||||| || |||||| |||| ||||| |||||||||||||||    
T  25462992 ttgtatatgacaaagtcttaggctcatcggcaattcctaaagcaacaactctactcattcaagatggtggagtca 25462918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 26944276 - 26944350
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||||||||||| || |||||| |||||||||| || | |||| | |||| ||| |||||||| ||||||    
T  26944276 ttgtatatgacaaagtctttggcttatcgacaattcctaaagcgacaactttaataattcaagatggtagagtca 26944350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 12157988 - 12158077
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||  | |||| ||||| |||||||||||||||    
T  12157988 tcaaagttggagtcattgtatatgacaaagtctttggctcattggcaattcctaaagcaagcactctactcattcaagatggtggagtca 12158077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 3395134 - 3395222
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| | || ||||| |||||||| ||||||    
T  3395134 caaagttggaatctttgtatatgacaaagtctttggctcattggcaattcctaaagcaacaactttactcattcaagatggtagagtca 3395222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 26932104 - 26932024
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatgg 322  Q
    |||||||||| || ||||||||||||||||| || ||| || | |||||||| || |||| | |||| ||||| |||||||    
T  26932104 caaagttgaaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacgactctactcattcaagatgg 26932024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 33309627 - 33309715
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  33309627 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 33309715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 7123370 - 7123466
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| ||||||||||||| || |||||| |||| ||||| |||||||||||||||    
T  7123370 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattccttaagcaacaactctactcattcaagatggtggagtca 7123466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 8394080 - 8394176
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| ||||||||||||| || |||||| |||| ||||| |||||||||||||||    
T  8394080 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcatagacaattcctcaagcaacaactctactcattcaagatggtggagtca 8394176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 380
Target Start/End: Original strand, 5872484 - 5872623
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | |||||| ||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||   ||||| |    
T  5872484 tcaaagttggagtcgttgcatatgaccaagtctttggctcataggcaattccttaagcaacaaatctactcattcaagatggtggagtcaaagaccatga 5872583  T
Q  341 gagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
      ||||||| || | ||||||||||||| ||||| |||||    
T  5872584 tggagcaattaatggagttcaacaaaatccttgatgattt 5872623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 5136754 - 5136850
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  5136754 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 5136850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 12743427 - 12743300
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||||| || ||||||||||| ||||| || |||||||| |||||||| ||  ||||| | || ||||| |||||||||||||||   ||| | |    
T  12743427 tcaaagttgaaatcattgtatatgaccaagtctttggcttataggcaattccttaagaaacaactatactcattcaagatggtggagtcaaagaccgtga 12743328  T
Q  341 gagagcaatcaacgaagttcaacaaaat 368  Q
      ||||||| |||| |||||||||||||    
T  12743327 tggagcaattaacggagttcaacaaaat 12743300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 387
Target Start/End: Original strand, 3501872 - 3501950
Alignment:
Q  309 atcatttaagatggtggagtcatgaaccatcagagagcaatcaacgaagttcaacaaaattcttgacgatttagtgaac 387  Q
    |||||||||||||||||| |||  | |||||| ||||||||  || |||||||||||||| ||||| ||||||||||||    
T  3501872 atcatttaagatggtggaatcaaaagccatcacagagcaattgacaaagttcaacaaaatccttgatgatttagtgaac 3501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 330
Target Start/End: Original strand, 4588623 - 4588710
Alignment:
Q  243 aaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||| | || ||||||||||| || || || ||| |||| |||||||| || ||||||||||| ||||| |||||||||||||||    
T  4588623 aaagttggagtcattgtatatgaccaaatctttggctcataggcaattccttaagcaacaattctactcattcaagatggtggagtca 4588710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 380
Target Start/End: Complemental strand, 52094861 - 52094722
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | || ||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| ||||||||||| |||   ||| | |    
T  52094861 tcaaagttggagtcattgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggattcaaagaccgtga 52094762  T
Q  341 gagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
      |||||||  ||| ||||||||||||| ||||| |||||    
T  52094761 tggagcaattgacggagttcaacaaaatccttgatgattt 52094722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 5207161 - 5207083
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagat 320  Q
    |||||||| | || ||||||||||||||||| || ||| |||||||| |||| || |||||| |||| |||||||||||    
T  5207161 caaagttggagtctttgtatatgacaaagtctttggctcatagacaaatcctaaatcaacaaatctactcatttaagat 5207083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 22782278 - 22782190
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || |||||||||| || |||||| |||| ||||| | |||||| ||||||    
T  22782278 caaagttggaatctttgtatatgacaaagtctttggctcatcgacaattcctaaagcaacaactctactcattcaggatggtagagtca 22782190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 12402637 - 12402550
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | ||||||||||||    
T  12402637 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtc 12402550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 10113649 - 10113738
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | || ||||||||||| ||||| || ||| | || |||||||| || |||||| |||| ||||| |||| ||||||||||    
T  10113649 tcaaagttggagtcattgtatatgactaagtctttggctcacaggcaattcctaaatcaacaactctactcattcaagacggtggagtca 10113738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 47563548 - 47563628
Alignment:
Q  243 aaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggt 323  Q
    ||||||| | || ||||||||||||||||| || ||| || |||||||||| || |||||| | || ||||| ||||||||    
T  47563548 aaagttggaatctttgtatatgacaaagtcgttggctcatcgacaattcctaaagcaacaactttactcattcaagatggt 47563628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 34256005 - 34255916
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  34256005 tcaaagttggagtcgttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 34255916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 4732342 - 4732466
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcagagagcaatcaacga 355  Q
    ||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||   ||| | |  ||||||| ||||     
T  4732342 ttgtatatgaccaagtctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtcaaagaccgtgatggagcaattaacgg 4732441  T
Q  356 agttcaacaaaattcttgacgattt 380  Q
    ||||||||||||| ||||| |||||    
T  4732442 agttcaacaaaatccttgatgattt 4732466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 380
Target Start/End: Original strand, 5591554 - 5591693
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | || ||||||||||  ||||| || ||| |||| |||||||| || |||||| |||| ||||| ||||||||||||| |   ||| | |    
T  5591554 tcaaagttggagtcattgtatatgatcaagtctttggctcataggcaattccttaagcaacaactctattcattcaagatggtggagttaaagaccgtga 5591653  T
Q  341 gagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
     ||||||||  ||| ||||||||||||||||||| |||||    
T  5591654 cagagcaattgacggagttcaacaaaattcttgatgattt 5591693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 327
Target Start/End: Complemental strand, 32429346 - 32429287
Alignment:
Q  268 aagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggag 327  Q
    ||||||||  |||||||||||||| ||||||||||| |||| ||||||| ||||||||||    
T  32429346 aagtcattgacttatagacaattcttgaaacaacaactctactcatttaggatggtggag 32429287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 15069360 - 15069448
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||||||||||    
T  15069360 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtca 15069448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 35744884 - 35744797
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||| | || ||||||||||| || || || ||| |||||||| || |||| |||||| |||| ||||| ||||||||||||||    
T  35744884 caaagttggagtcattgtatatgacgaaatctttggctcatagacaactcttgaagcaacaactctactcattcaagatggtggagtc 35744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 18853770 - 18853843
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    ||||||||||| || || || ||| |||| ||| || ||||||||||| |||| ||||| ||||||||||||||    
T  18853770 ttgtatatgacgaaatctttggctcataggcaactcttgaaacaacaactctattcattcaagatggtggagtc 18853843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Complemental strand, 6594039 - 6593943
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  6594039 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 6593943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 330
Target Start/End: Complemental strand, 18391677 - 18391581
Alignment:
Q  234 gatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| || |||||| | |||||||||||||| ||||| || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  18391677 gatatggtctaagttggaatcgttgtatatgaccaagtcgttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 18391581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 36197 - 36285
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| |||||| || | |||||||| || |||||| |||| ||||| | |||||||||||||    
T  36197 caaagttggaatctttgtatatgacaaagtctttagctcatcggcaattcctaaagcaacaactctactcattcaggatggtggagtca 36285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 380
Target Start/End: Complemental strand, 47675621 - 47675497
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcagagagcaatcaacga 355  Q
    ||||||||||| || || || ||| |||| |||||||| || |||||| |||||||||| |||||||||||||||   ||  | |  ||||||| ||||     
T  47675621 ttgtatatgaccaaatctttggctcataggcaattccttaagcaacaactctaatcattcaagatggtggagtcaaagactgtgatggagcaattaacgg 47675522  T
Q  356 agttcaacaaaattcttgacgattt 380  Q
    ||||||||||||| ||||| |||||    
T  47675521 agttcaacaaaatccttgatgattt 47675497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 48490074 - 48490163
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | || |||||||| ||||| || || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||    
T  48490074 tcaaagttggagtcattgtatattacaaaatctttggctcataggcaattccttaagcaacaactctactcattcaagatggtggagtca 48490163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 7094002 - 7093914
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || |||||||||| || |||||| |||| ||||| | |||||| ||||||    
T  7094002 caaagttggagtctttgtatatgacaaagtctttggctcatcgacaattcctaaagcaacaactctactcattcaggatggtagagtca 7093914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 7351192 - 7351104
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| |||||||| ||||||    
T  7351192 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaagatggtagagtca 7351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 24749334 - 24749422
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||||| || ||||||||||||||||| || ||| || | |||||||| || ||| || |||| ||||| | |||||||||||||    
T  24749334 caaagttgaaatctttgtatatgacaaagtctttggctgatcggcaattcctaaagcaataactctactcattcaggatggtggagtca 24749422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 38394733 - 38394821
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| |||||||| ||||||    
T  38394733 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaagatggtagagtca 38394821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 380
Target Start/End: Original strand, 6570656 - 6570795
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | || ||||||||||| || || || ||| |||| |||||||| || |||||| |||  ||||| ||||| |||||||||   ||| | |    
T  6570656 tcaaagttgcagtcattgtatatgaccaaatctttggctcataggcaattccttaagcaacaactctcctcattcaagattgtggagtcaaagaccgtaa 6570755  T
Q  341 gagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
     |||||||| |||| ||||||| ||||| ||||| |||||    
T  6570756 cagagcaattaacggagttcaataaaatacttgatgattt 6570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 13290041 - 13289954
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagt 328  Q
    ||||||||| | || ||||||||||||||||| || ||| || |  ||||||| || |||||| |||| ||||| |||||||||||||    
T  13290041 tcaaagttggagtcattgtatatgacaaagtctttggctcatcggtaattcctaaagcaacaactctactcattcaagatggtggagt 13289954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 16884421 - 16884334
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||| | || ||||||||||| || || || ||| |||| ||| || |||| |||||| |||| ||||||||||||||||||||    
T  16884421 caaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatggtggagtc 16884334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 49091157 - 49091084
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    ||||| ||||| || || || ||| |||| ||| || |||||||||||||||| ||||| ||||||||||||||    
T  49091157 ttgtacatgacgaaatcgttggctcataggcaactcttgaaacaacaattctattcattcaagatggtggagtc 49091084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 22135550 - 22135638
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  22135550 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 22135638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 40550577 - 40550665
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  40550577 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 40550665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 380
Target Start/End: Original strand, 31657873 - 31658012
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatca 340  Q
    ||||||||| | || ||||||||||| || || || ||||||||  ||||||| || |||||| | || ||||| |||||||||||||||   ||| | |    
T  31657873 tcaaagttggagtcattgtatatgaccaaatctttggcttataggaaattccttaagcaacaactttactcattcaagatggtggagtcaaagaccgtga 31657972  T
Q  341 gagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
     |||||||| |||| ||||||||||||| ||||| |||||    
T  31657973 cagagcaattaacggagttcaacaaaatccttgatgattt 31658012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 3157332 - 3157421
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | || || |||||||| ||||| || ||| ||||||||||||| || |||||| |||| ||||| |||||||||||||||    
T  3157332 tcaaagttggagtcattctatatgaccaagtctttggctcatagacaattccttaagcaacaactctattcattcaagatggtggagtca 3157421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 374
Target Start/End: Complemental strand, 28203240 - 28203108
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcag 341  Q
    |||||||| | || ||||||| ||||||||| ||  || || |||||||||| || |||||| |||| ||||| |||||||||||||||  | ||||||     
T  28203240 caaagttggaatctttgtataagacaaagtctttgactcatcgacaattcctaaagcaacaactctactcattcaagatggtggagtcaaaagccatcat 28203141  T
Q  342 agagcaatcaacgaagttcaacaaaattcttga 374  Q
     ||||||   ||| ||||||||||||| |||||    
T  28203140 ggagcaactgacggagttcaacaaaatccttga 28203108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 380
Target Start/End: Complemental strand, 50168860 - 50168710
Alignment:
Q  229 acgtggatatgctcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagt 328  Q
    |||| |||||| ||||||||| | || ||||||||||| ||||  || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||    
T  50168860 acgtcgatatggtcaaagttggagtc-ttgtatatgaccaagtttttggctcataggcaattccttaagcaacaactctattcattcaagatggtggagt 50168762  T
Q  329 catgaaccatcagagagcaatcaacgaagttcaacaaaattcttgacgattt 380  Q
    ||   ||| | |  ||||||| || | ||||||||||||| ||||| |||||    
T  50168761 caaagaccgtgatggagcaattaatggagttcaacaaaatccttgatgattt 50168710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 374
Target Start/End: Complemental strand, 27338674 - 27338542
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcag 341  Q
    |||||||| | || ||||||||||||||||| ||  || || | |||||||| || |||||| |||| ||||| | |||||||||||||   |||||||     
T  27338674 caaagttggaatctttgtatatgacaaagtctttgactcattggcaattcctaaagcaacaactctactcattcaggatggtggagtcaaagaccatcat 27338575  T
Q  342 agagcaatcaacgaagttcaacaaaattcttga 374  Q
     ||||||   ||| ||||||||||||| |||||    
T  27338574 ggagcaacttacggagttcaacaaaatccttga 27338542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 380
Target Start/End: Complemental strand, 28222905 - 28222781
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtcatgaaccatcagagagcaatcaacga 355  Q
    ||||||||||| || || || ||| |||| |||||||| || |||||| |||| ||||| |||||||||||||||   ||| | | ||||||||  ||      
T  28222905 ttgtatatgaccaaatctttggctcataggcaattccttaagcaacaactctattcattcaagatggtggagtcaaagaccgtgacagagcaattgacag 28222806  T
Q  356 agttcaacaaaattcttgacgattt 380  Q
    ||||||||||||| ||||| |||||    
T  28222805 agttcaacaaaatccttgatgattt 28222781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 8348592 - 8348518
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||||||||||| || |   || |||||||||| || |||||| |||| ||||| |||||||||||||||    
T  8348592 ttgtatatgacaaagtctttgggacatcgacaattcctaaagcaacaactctactcattcaagatggtggagtca 8348518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 20300869 - 20300957
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  20300869 caaagttggaatctttgtatatgacaaagtctttggctcatcgtcaattcctaaagcaacaactctactcattcaggatggtagagtca 20300957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 28841160 - 28841248
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  28841160 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 28841248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 47178100 - 47178172
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatt 314  Q
    |||||||| | || |||||||||||||||||||| ||| || | |||||||| ||||||| | |||| |||||    
T  47178100 caaagttggaatctttgtatatgacaaagtcattggctcatcggcaattcctaaaacaacgactctactcatt 47178172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 51750775 - 51750863
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  51750775 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 51750863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 115272 - 115357
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtgga 326  Q
    ||||||||| | || ||||||||||| ||||| || ||| ||||||||||||| || |||||| |||| ||||| |||||||||||    
T  115272 tcaaagttgtagtcattgtatatgaccaagtctttggctcatagacaattccttaagcaacaactctactcattcaagatggtgga 115357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 22405471 - 22405383
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||||||   |||||||| || |||| |||||| ||||| |||||||||||||||    
T  22405471 caaagttggaatctttgtatatgacaaagtctttggcttatcagcaattcctaaagcaacgattctactcattcaagatggtggagtca 22405383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 328
Target Start/End: Complemental strand, 21520235 - 21520149
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagt 328  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||||| |||||||||||    
T  21520235 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcatttaggatggtggagt 21520149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 19348771 - 19348684
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||| | || ||||||||||| || || || ||| |||||||| || |||| |||||| |||| ||||| ||||||||||||||    
T  19348771 caaagttggagtcattgtatatgacgaaatctttggctcatagacaactcttgaagcaacaactctactcattcaagatggtggagtc 19348684  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 42019368 - 42019299
Alignment:
Q  261 tatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||| ||||| || |||||||| |||||||| ||||| ||| | ||  ||||||||||||||||||||    
T  42019368 tatgaccaagtctttggcttataggcaattcctaaaacaccaactttatacatttaagatggtggagtca 42019299  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 34574700 - 34574612
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    ||||||||| | || ||||||||||||||| | || ||| |||| |||||||  |  |||||| |||| |||||||||||| |||||||    
T  34574700 tcaaagttggagtctttgtatatgacaaagcctttggctcataggcaattccaaatgcaacaactctactcatttaagatgttggagtc 34574612  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 36560682 - 36560594
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  36560682 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 36560594  T

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Target: scaffold0219 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 26915 - 26826
Alignment:
Q  241 tcaaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    ||||||||| | ||||||||| ||||||| || || ||| ||| ||||||||| |||| |||  |||| || ||||||||||||||||||    
T  26915 tcaaagttggagtcgttgtatgtgacaaattctttggctcatacacaattcctaaaactacatctctactcgtttaagatggtggagtca 26826  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 149548 - 149635
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    |||||||| | || ||||||||||| || || || ||| |||| ||| || |||| |||||| |||| ||||||||||||||||||||    
T  149548 caaagttggagtcattgtatatgacgaaatctttggctcataggcaactcttgaagcaacaactctattcatttaagatggtggagtc 149635  T

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Target: scaffold1991 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1991
Description:

Target: scaffold1991; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 1028 - 1101
Alignment:
Q  256 ttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtc 329  Q
    ||||||||||| || || || ||| |||| ||| || ||||||||||| |||| ||||| ||||||||||||||    
T  1028 ttgtatatgacgaaatctttggctcataggcaactcttgaaacaacaactctattcattcaagatggtggagtc 1101  T

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Target: scaffold0140 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 22864 - 22952
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| |||| ||||| | |||||| ||||||    
T  22864 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactctactcattcaggatggtagagtca 22952  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 34288 - 34376
Alignment:
Q  242 caaagttgaattcgttgtatatgacaaagtcattagcttatagacaattcctgaaacaacaattctaatcatttaagatggtggagtca 330  Q
    |||||||| | || ||||||||||||||||| || ||| || | |||||||| || |||||| || | ||||| | |||||||||||||    
T  34288 caaagttggaatctttgtatatgacaaagtctttggctcatcggcaattcctaaagcaacaactccactcattcaggatggtggagtca 34376  T

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