View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12968_high_18 (Length: 358)

Name: NF12968_high_18
Description: NF12968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12968_high_18
NF12968_high_18
[»] chr3 (33 HSPs)
chr3 (19-288)||(52823778-52824046)
chr3 (291-358)||(54868928-54868995)
chr3 (288-358)||(53982008-53982078)
chr3 (291-358)||(11095386-11095453)
chr3 (291-358)||(49607414-49607481)
chr3 (290-358)||(33644199-33644267)
chr3 (291-358)||(17470405-17470472)
chr3 (296-358)||(52629305-52629367)
chr3 (286-358)||(26141565-26141637)
chr3 (291-358)||(24699987-24700054)
chr3 (291-358)||(27714924-27714991)
chr3 (292-358)||(31456690-31456756)
chr3 (291-358)||(8076393-8076460)
chr3 (291-358)||(33118884-33118951)
chr3 (291-358)||(36707457-36707524)
chr3 (291-358)||(47531865-47531932)
chr3 (291-356)||(14623874-14623939)
chr3 (291-358)||(35536626-35536693)
chr3 (295-358)||(48587124-48587187)
chr3 (291-358)||(51419393-51419460)
chr3 (296-356)||(26754700-26754760)
chr3 (291-358)||(8956762-8956829)
chr3 (291-358)||(11347955-11348022)
chr3 (292-358)||(13898088-13898154)
chr3 (290-356)||(30801768-30801834)
chr3 (291-353)||(36331416-36331478)
chr3 (290-356)||(45058588-45058653)
chr3 (290-358)||(20764948-20765016)
chr3 (291-358)||(9562999-9563066)
chr3 (291-354)||(41080709-41080771)
chr3 (291-358)||(41189797-41189864)
chr3 (291-358)||(35965807-35965874)
chr3 (291-356)||(11907371-11907436)
[»] chr8 (30 HSPs)
chr8 (289-358)||(504154-504223)
chr8 (288-358)||(23122630-23122700)
chr8 (289-358)||(15197331-15197400)
chr8 (281-358)||(34012329-34012406)
chr8 (291-358)||(1179973-1180040)
chr8 (291-358)||(12831047-12831114)
chr8 (291-358)||(14547922-14547989)
chr8 (290-358)||(40423976-40424044)
chr8 (291-358)||(37038479-37038546)
chr8 (292-358)||(5957831-5957897)
chr8 (289-358)||(43414614-43414683)
chr8 (286-358)||(20074967-20075039)
chr8 (291-358)||(44507120-44507187)
chr8 (296-358)||(10621120-10621182)
chr8 (291-356)||(16383377-16383442)
chr8 (291-356)||(34307216-34307281)
chr8 (290-358)||(15048215-15048282)
chr8 (291-356)||(30479509-30479574)
chr8 (286-354)||(24307830-24307898)
chr8 (291-354)||(4854900-4854963)
chr8 (291-358)||(10284664-10284731)
chr8 (291-354)||(24307629-24307692)
chr8 (292-329)||(9122196-9122233)
chr8 (291-356)||(17443825-17443890)
chr8 (291-356)||(32032725-32032789)
chr8 (310-358)||(8841465-8841513)
chr8 (291-358)||(42221515-42221582)
chr8 (286-356)||(15258964-15259034)
chr8 (291-352)||(14055631-14055692)
chr8 (291-356)||(16056436-16056501)
[»] chr5 (24 HSPs)
chr5 (290-358)||(35785198-35785266)
chr5 (281-358)||(33149671-33149748)
chr5 (294-358)||(18520917-18520981)
chr5 (291-358)||(2740274-2740341)
chr5 (291-357)||(36732976-36733042)
chr5 (288-358)||(40145404-40145474)
chr5 (289-358)||(14831812-14831881)
chr5 (289-358)||(28177773-28177842)
chr5 (289-358)||(42414335-42414404)
chr5 (291-358)||(6679698-6679765)
chr5 (291-358)||(13811652-13811719)
chr5 (291-358)||(35943925-35943992)
chr5 (292-350)||(36875644-36875702)
chr5 (291-356)||(3921300-3921365)
chr5 (291-356)||(2252203-2252268)
chr5 (290-358)||(26720515-26720583)
chr5 (290-358)||(26990264-26990332)
chr5 (291-358)||(15409643-15409710)
chr5 (286-354)||(39688934-39689002)
chr5 (296-354)||(10356639-10356698)
chr5 (291-358)||(33825357-33825424)
chr5 (291-352)||(20073555-20073616)
chr5 (290-357)||(6260035-6260102)
chr5 (292-358)||(16327902-16327968)
[»] chr2 (33 HSPs)
chr2 (286-358)||(28381688-28381760)
chr2 (290-358)||(40701477-40701545)
chr2 (291-358)||(7465768-7465835)
chr2 (291-358)||(17473020-17473087)
chr2 (291-358)||(9058480-9058547)
chr2 (291-358)||(10249415-10249482)
chr2 (291-358)||(32505681-32505748)
chr2 (291-358)||(33436211-33436278)
chr2 (290-358)||(4060684-4060752)
chr2 (294-358)||(28863458-28863522)
chr2 (291-358)||(33436133-33436200)
chr2 (289-358)||(13438341-13438410)
chr2 (289-358)||(19930853-19930922)
chr2 (289-358)||(27864702-27864771)
chr2 (289-358)||(40613935-40614004)
chr2 (291-358)||(5574521-5574588)
chr2 (291-358)||(30915463-30915530)
chr2 (291-358)||(38273175-38273242)
chr2 (291-358)||(38882847-38882913)
chr2 (291-358)||(20700815-20700882)
chr2 (289-356)||(43490119-43490186)
chr2 (291-356)||(26891539-26891604)
chr2 (292-356)||(41575138-41575202)
chr2 (291-358)||(42257193-42257260)
chr2 (290-356)||(17820039-17820105)
chr2 (307-356)||(13365369-13365418)
chr2 (291-358)||(2533124-2533190)
chr2 (309-356)||(2997522-2997569)
chr2 (291-358)||(36168836-36168903)
chr2 (291-356)||(38732354-38732419)
chr2 (291-356)||(45097770-45097835)
chr2 (297-352)||(3439985-3440040)
chr2 (286-314)||(28863614-28863642)
[»] chr7 (35 HSPs)
chr7 (291-354)||(4999551-4999614)
chr7 (289-358)||(19329840-19329909)
chr7 (294-358)||(3783998-3784062)
chr7 (286-358)||(7389384-7389456)
chr7 (291-358)||(19436220-19436287)
chr7 (291-358)||(36361946-36362013)
chr7 (289-358)||(35137531-35137600)
chr7 (290-358)||(38267039-38267107)
chr7 (291-358)||(3434562-3434629)
chr7 (291-358)||(8080416-8080483)
chr7 (291-358)||(36362026-36362093)
chr7 (291-357)||(10343597-10343663)
chr7 (291-358)||(38837217-38837284)
chr7 (291-358)||(40957707-40957774)
chr7 (289-358)||(3694365-3694434)
chr7 (291-356)||(22343361-22343426)
chr7 (291-352)||(35468894-35468955)
chr7 (289-356)||(8238210-8238278)
chr7 (291-358)||(18207180-18207247)
chr7 (291-358)||(46374835-46374902)
chr7 (296-358)||(35522881-35522943)
chr7 (289-358)||(21234399-21234468)
chr7 (291-356)||(38044197-38044262)
chr7 (291-356)||(41915741-41915806)
chr7 (290-358)||(39255956-39256024)
chr7 (290-356)||(32564461-32564527)
chr7 (292-358)||(32951526-32951592)
chr7 (290-356)||(41423681-41423747)
chr7 (291-340)||(11044188-11044237)
chr7 (291-358)||(46033834-46033901)
chr7 (289-347)||(31735882-31735940)
chr7 (291-356)||(7727906-7727971)
chr7 (291-356)||(36208173-36208238)
chr7 (291-352)||(40846152-40846213)
chr7 (296-355)||(2318279-2318338)
[»] chr1 (30 HSPs)
chr1 (288-358)||(27564768-27564838)
chr1 (290-358)||(9474909-9474977)
chr1 (291-358)||(2581915-2581982)
chr1 (290-358)||(48716315-48716383)
chr1 (291-358)||(3000319-3000386)
chr1 (291-358)||(38632354-38632421)
chr1 (289-358)||(47452353-47452422)
chr1 (291-358)||(8346421-8346488)
chr1 (291-358)||(38595154-38595221)
chr1 (291-358)||(41758805-41758872)
chr1 (291-358)||(51898716-51898783)
chr1 (289-358)||(37649196-37649265)
chr1 (291-358)||(32813247-32813314)
chr1 (290-356)||(50591035-50591101)
chr1 (291-356)||(5959035-5959100)
chr1 (294-358)||(44548409-44548473)
chr1 (291-358)||(50630458-50630525)
chr1 (289-358)||(26440732-26440801)
chr1 (291-358)||(43132-43199)
chr1 (291-358)||(23597124-23597191)
chr1 (294-357)||(26274435-26274498)
chr1 (291-358)||(49811560-49811627)
chr1 (292-358)||(11152411-11152476)
chr1 (290-356)||(41608528-41608594)
chr1 (296-356)||(44453984-44454044)
chr1 (291-358)||(37926471-37926538)
chr1 (281-356)||(45044595-45044670)
chr1 (289-356)||(47748441-47748507)
chr1 (296-358)||(34340072-34340133)
chr1 (321-358)||(13414791-13414828)
[»] chr6 (21 HSPs)
chr6 (289-358)||(17598552-17598621)
chr6 (286-358)||(32869673-32869745)
chr6 (291-358)||(29857827-29857894)
chr6 (294-358)||(22880691-22880755)
chr6 (290-358)||(31109433-31109501)
chr6 (291-358)||(6209498-6209565)
chr6 (291-358)||(11427616-11427685)
chr6 (290-356)||(15508059-15508125)
chr6 (291-356)||(15990077-15990142)
chr6 (291-356)||(30341395-30341460)
chr6 (289-356)||(31953065-31953132)
chr6 (291-358)||(31976248-31976315)
chr6 (291-358)||(15832577-15832644)
chr6 (295-358)||(28536519-28536582)
chr6 (291-358)||(31110794-31110859)
chr6 (296-358)||(9379745-9379807)
chr6 (292-357)||(946377-946442)
chr6 (291-356)||(22422053-22422118)
chr6 (290-358)||(4231547-4231615)
chr6 (294-358)||(23128160-23128224)
chr6 (291-358)||(12732482-12732549)
[»] scaffold0237 (1 HSPs)
scaffold0237 (291-358)||(4029-4096)
[»] chr4 (34 HSPs)
chr4 (291-358)||(41236347-41236414)
chr4 (290-356)||(6034043-6034109)
chr4 (290-358)||(11511495-11511563)
chr4 (291-358)||(480480-480547)
chr4 (291-358)||(23608235-23608302)
chr4 (291-358)||(48183082-48183149)
chr4 (291-358)||(50052461-50052528)
chr4 (289-357)||(3481652-3481720)
chr4 (290-358)||(50526204-50526272)
chr4 (290-358)||(54473566-54473634)
chr4 (291-358)||(29234278-29234345)
chr4 (291-358)||(29239886-29239953)
chr4 (289-358)||(40574777-40574846)
chr4 (291-358)||(24995140-24995207)
chr4 (291-358)||(42044400-42044467)
chr4 (291-356)||(55079749-55079814)
chr4 (291-356)||(55475191-55475256)
chr4 (290-357)||(31910191-31910258)
chr4 (291-356)||(19670751-19670816)
chr4 (286-356)||(29547994-29548064)
chr4 (291-356)||(32766958-32767023)
chr4 (291-356)||(47986208-47986273)
chr4 (291-356)||(50813927-50813992)
chr4 (309-356)||(17983778-17983825)
chr4 (291-358)||(29977885-29977952)
chr4 (291-358)||(47104544-47104611)
chr4 (282-356)||(18924530-18924604)
chr4 (291-356)||(8343198-8343263)
chr4 (299-354)||(29589777-29589831)
chr4 (296-358)||(53352599-53352660)
chr4 (299-356)||(28480303-28480360)
chr4 (299-356)||(28481178-28481235)
chr4 (299-356)||(28482053-28482110)
chr4 (291-356)||(44536781-44536845)
[»] scaffold1268 (1 HSPs)
scaffold1268 (289-358)||(962-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (289-358)||(962-1031)
[»] scaffold0321 (1 HSPs)
scaffold0321 (291-358)||(10142-10209)
[»] scaffold0018 (1 HSPs)
scaffold0018 (307-356)||(152514-152563)


Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 19 - 288
Target Start/End: Original strand, 52823778 - 52824046
Alignment:
Q  19 ccacctgcgacccaccgtgtccaccatgctaacaaactcgcctccaaacaccgtcgcttctctctcgaccaccctaattctcccaaccatttccctctct 118  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52823778 ccacctgcgacc-accgtgtccaccatgctaacaaactcgcctccaaacaccgtcgcttctctctcgaccaccctaattctcccaaccatttccctctct 52823876  T
Q  119 gcgatatttgcctcgtaattctctccaatatttatgcatactaaacttgttatatatagaaagagactatatagtattaatttcatttaactatatcaac 218  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52823877 gcgatatttgcctcgtaattctctccaatatttatgtatactaatcttgttatatatagaaagagactatatagtattaatttcatttaactatatcaac 52823976  T
Q  219 tcatgaatttattataataatgatacattggatttgtttctttgtttgtaggaaagaagaggttttgttt 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52823977 tcatgaatttattataataatgatacattggatttgtttctttgtttgtaggaaagaagaggttttgttt 52824046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 54868995 - 54868928
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacg 54868928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 53982008 - 53982078
Alignment:
Q  288 tatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  53982008 tatgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 53982078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 11095453 - 11095386
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 11095386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 49607414 - 49607481
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 49607481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 33644199 - 33644267
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacg 33644267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 17470405 - 17470472
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacg 17470472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 52629305 - 52629367
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 52629367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 26141637 - 26141565
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||| |||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  26141637 tttatgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacg 26141565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 24700054 - 24699987
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacg 24699987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 27714991 - 27714924
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 27714924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 31456690 - 31456756
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacg 31456756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 8076393 - 8076460
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacg 8076460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 33118951 - 33118884
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||||| |||||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacg 33118884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 36707524 - 36707457
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||| |||||||| || ||||||||| ||||||| ||||||||||||||||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacg 36707457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 47531865 - 47531932
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacg 47531932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 14623939 - 14623874
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||||||| ||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 14623874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 35536626 - 35536693
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||  |||||||||||| ||||||||||||| |||||| |||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacg 35536693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 48587187 - 48587124
Alignment:
Q  295 aatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||| ||| ||||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacg 48587124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 51419460 - 51419393
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| ||||||||| ||||||| | ||| ||||||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacg 51419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 26754700 - 26754760
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||| ||||||||||||||| |||||||||||| || |||| ||||||||||||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgaca 26754760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 8956762 - 8956829
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||  |||||||||| | ||||||||||||| |||||| |||||||    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacg 8956829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 11348022 - 11347955
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| |||||| || ||||||| | ||||||| ||||||||||||||||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacg 11347955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 13898154 - 13898088
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||| ||| ||| |||||| ||||||||||||  |||||||||||| ||||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacg 13898088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 30801834 - 30801768
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||||||||||||||| ||  |||||||| ||||| |||||||||||||| |||||    
T  30801834 tgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgaca 30801768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 36331478 - 36331416
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctg 353  Q
    |||| |||||||||| |||||||||||||||||| ||||  |||||| |||||||||||||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctg 36331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 45058653 - 45058588
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||| |||||||||| |||||||||| ||||||||||||  |||||||||||| ||||||||||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacacc-cttgacacccacataaaaatctgaca 45058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 20765016 - 20764948
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||| |||| ||||||||| |||||| ||| |||||||  ||| ||||||||||||||||||||||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacg 20764948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 9562999 - 9563066
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||| ||||| ||||||| ||||||| | ||||||| ||| | ||||||||||||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacg 9563066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 41080709 - 41080771
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 354  Q
    ||||||||||||||||||| |||||| | |||| ||||| |||||||||||| |||||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctga 41080771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 41189864 - 41189797
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||| ||| |||||| |||||||||| | ||||||||||||| |||||| |||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacg 41189797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 35965874 - 35965807
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||| ||| |||||  ||  |||||| | ||||||||||||| ||||||||||||||    
T  35965874 gagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacg 35965807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 11907371 - 11907436
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| ||||||||||||||||||||| || ||||||||   |  |||| |||||||||||||||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgaca 11907436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 504223 - 504154
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacg 504154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 23122700 - 23122630
Alignment:
Q  288 tatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  23122700 tatgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacg 23122630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 15197331 - 15197400
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 15197400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 34012406 - 34012329
Alignment:
Q  281 ttttgtttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| |||||||    
T  34012406 ttttttttatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacg 34012329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 1180040 - 1179973
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 1179973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 12831047 - 12831114
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacg 12831114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 14547922 - 14547989
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  14547922 gagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacg 14547989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 40424044 - 40423976
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacg 40423976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 37038479 - 37038546
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 37038546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 5957831 - 5957897
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 5957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 43414683 - 43414614
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacg 43414614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 20075039 - 20074967
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||| |||||| |||||||    
T  20075039 tttatgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacg 20074967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 44507187 - 44507120
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| ||| |||||||  ||| ||||||||||||||||||||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacg 44507120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 10621182 - 10621120
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 10621120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 16383377 - 16383442
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 16383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 34307216 - 34307281
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 15048282 - 15048215
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacg 15048215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 24307898 - 24307830
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 354  Q
    |||| |||| |||||||||| |||||||||| |||||||||| |  |||||||||||||||||||||||    
T  24307898 tttaagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 4854963 - 4854900
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 354  Q
    ||||||||||||||||||| |||||| |||||||||||| ||| ||||| ||| ||||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctga 4854900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 10284731 - 10284664
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| ||||||||||||||||||||  || ||||||||  |||||||||||||||||||| |||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacg 10284664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 24307629 - 24307692
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 354  Q
    |||| |||||||||| |||||||||| |||||||||| |  |||||||||||||||||||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 9122196 - 9122233
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacacc 329  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacacc 9122233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 17443825 - 17443890
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||||||| |||||| || |||||||| | || |||| |||||||||||||||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 17443890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 32032725 - 32032789
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| |||||||||| | || |||| ||||||||||||||||||    
T  32032725 gagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgaca 32032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 8841513 - 8841465
Alignment:
Q  310 cccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||| ||||| |||||| |||||||||||||||||||||| |||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacg 8841465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 42221515 - 42221582
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||| ||| |||||| || |||||||    | |||||||||||||||||||||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacg 42221582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 15259034 - 15258964
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||| |||||||||||| || |||||||||||||||| |  | |||| ||||| ||||||||||||    
T  15259034 tttaagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgaca 15258964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 14055692 - 14055631
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 352  Q
    |||| ||||||||| ||||||||||| || ||||||||   |||||| ||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatct 14055631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 16056501 - 16056436
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| ||| |||||  || ||||||| |  |||||||||||||||||||||||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgaca 16056436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 35785198 - 35785266
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacg 35785266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 33149748 - 33149671
Alignment:
Q  281 ttttgtttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| |||||||    
T  33149748 ttttttttatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacg 33149671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 18520981 - 18520917
Alignment:
Q  294 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 18520917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 2740274 - 2740341
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 2740341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 36733042 - 36732976
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 357  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacac 36732976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 40145404 - 40145474
Alignment:
Q  288 tatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||    
T  40145404 tatgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacg 40145474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 14831812 - 14831881
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacg 14831881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 28177773 - 28177842
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 28177842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 42414404 - 42414335
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacg 42414335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 6679698 - 6679765
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacg 6679765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 13811652 - 13811719
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||| ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  13811652 gagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacg 13811719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 35943992 - 35943925
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacg 35943925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaat 350  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 3921365 - 3921300
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 3921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 2252268 - 2252203
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| ||| |||||| ||||||||||||  |||||||||||||||||||||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2252203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 26720515 - 26720583
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| ||||| ||| ||||||||||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacg 26720583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 26990264 - 26990332
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| ||||| ||| ||||||||||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacg 26990332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 15409710 - 15409643
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| |||||| || |||||||   ||||||||||||||||||||||||||||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacg 15409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 39689002 - 39688934
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 354  Q
    |||| |||| |||||||||| |||||||||  |||||||||| |  |||||||||||||||||||||||    
T  39689002 tttaagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 354
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  296 atgatacatagacacccttagatggcaataca-ccttttgacacccacacaaaaatctga 354  Q
    |||||||||||||| |||||| |||||||||| ||  |||||||||||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 33825424 - 33825357
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||| ||||||||  ||||| |||||||||||   |||||||||||| ||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacg 33825357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 20073616 - 20073555
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 352  Q
    ||||||||||| ||||||| | ||||||| ||||||||| |||||||| |||| ||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatct 20073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 6260102 - 6260035
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 357  Q
    |||||||||||||||| ||| || ||| || ||||||||| ||| |||||||| ||||||||| ||||    
T  6260102 tgagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacac 6260035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 16327902 - 16327968
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||| ||| | | |||||| |||||||||| |  |||||||||||| ||||||||||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacg 16327968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 28381760 - 28381688
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  28381760 tttatgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacg 28381688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 40701477 - 40701545
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacg 40701545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 7465835 - 7465768
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacg 7465768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 17473020 - 17473087
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacg 17473087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 9058480 - 9058547
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 9058547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 10249482 - 10249415
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacg 10249415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 32505748 - 32505681
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacg 32505681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 33436211 - 33436278
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacg 33436278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 4060684 - 4060752
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  4060684 tgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacg 4060752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 28863458 - 28863522
Alignment:
Q  294 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 28863522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 33436200 - 33436133
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacg 33436133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 13438341 - 13438410
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||||||||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacg 13438410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 19930922 - 19930853
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  19930922 atgaataatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacg 19930853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 27864702 - 27864771
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacg 27864771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 40614004 - 40613935
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  40614004 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 40613935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 5574588 - 5574521
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacg 5574521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 30915463 - 30915530
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacg 30915530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 38273242 - 38273175
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| ||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacg 38273175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 38882913 - 38882847
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacg 38882847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 20700815 - 20700882
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||  |||||||||||| |||||| || ||||||||||||||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacg 20700882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 43490119 - 43490186
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||||| |||||||||| |||||||||| || |||||||||  |||||||||||||||||||||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 26891604 - 26891539
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| ||||||||||| ||||||||| ||||||||||||  | |||||||||||||||||||||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgaca 26891539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 41575138 - 41575202
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||  ||||||||||| |||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgaca 41575202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 42257193 - 42257260
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| | |||| |||||||||| | ||||||||||||| ||||||||||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacg 42257260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 17820105 - 17820039
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||| |||||||||||||| |  ||| ||||||||||||  |||||||||||||||||||||||||    
T  17820105 tgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 13365369 - 13365418
Alignment:
Q  307 acacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  13365369 acacccttagatggcaatataccccttgacacccacacaaaaatctgaca 13365418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 2533124 - 2533190
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| |||||  |||||||||| | ||||||| ||||||||||||||||||||    
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacg 2533190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 2997569 - 2997522
Alignment:
Q  309 acccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2997522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 36168836 - 36168903
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| ||||||||| ||||||| | ||| || ||||||||||||| |||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacg 36168903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 38732354 - 38732419
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||  || ||||||| |  |||||||||||||||||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgaca 38732419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 45097835 - 45097770
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| ||| |||||| |||||||||| |  |||||||||| ||||||||||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgaca 45097770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 3439985 - 3440040
Alignment:
Q  297 tgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 352  Q
    |||||| ||||||||||||| |||||||||||   | |||||||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatct 3440040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 28863642 - 28863614
Alignment:
Q  286 tttatgagtaatgatacatagacaccctt 314  Q
    |||||||||||||||||||||||||||||    
T  28863642 tttatgagtaatgatacatagacaccctt 28863614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 6e-28; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 4999614 - 4999551
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 4999551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 19329840 - 19329909
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  19329840 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacg 19329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 3783998 - 3784062
Alignment:
Q  294 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacg 3784062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 7389384 - 7389456
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  7389384 tttaagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacg 7389456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 19436287 - 19436220
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacg 19436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 36362013 - 36361946
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacg 36361946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 35137531 - 35137600
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacg 35137600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 38267039 - 38267107
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||||||||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacg 38267107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 3434562 - 3434629
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacg 3434629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 8080483 - 8080416
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacg 8080416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 36362026 - 36362093
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacg 36362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 10343663 - 10343597
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 357  Q
    |||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 38837217 - 38837284
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| ||  ||||| ||||||||||||||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacg 38837284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 40957707 - 40957774
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||| ||||| |||||||||||  ||||| ||||||||||||||||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacg 40957774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 3694365 - 3694434
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||| ||| |||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  3694365 atgaataatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacg 3694434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 22343361 - 22343426
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 22343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 35468955 - 35468894
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 352  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 8238210 - 8238278
Alignment:
Q  289 atgagtaatgatacatagacaccct-tagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||||| |||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgaca 8238278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 18207180 - 18207247
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||| |||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacg 18207247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 46374902 - 46374835
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| |||||| |||||| ||||| ||| ||||||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacg 46374835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 35522881 - 35522943
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||| |||||  |||||||||||| ||| ||||||||||||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacg 35522943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 21234399 - 21234468
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||| |||||||||||||| |||||| || ||||||||| |||||||| ||||||||||| |||||||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacg 21234468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 38044197 - 38044262
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||| ||||||||||||||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgaca 38044262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 41915741 - 41915806
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||| ||||||||||||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgaca 41915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 39256024 - 39255956
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||| |||||||||||||| |||||| ||||||||||||  |||| ||||| ||||||||||||||||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacg 39255956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 32564527 - 32564461
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||| |||||||||| |||  ||||| ||||||||||||  |||||||||||||||||||||||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 32951592 - 32951526
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||||| ||||||| | ||| ||| |||||||||||||| |||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacg 32951526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 41423681 - 41423747
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||| |||||||||||||| | |||||||| ||||||||| |||||||  ||||||||||||||||    
T  41423681 tgagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgaca 41423747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 11044188 - 11044237
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacaccc 340  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 46033901 - 46033834
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||| |  ||||| |||||||||||| ||| ||||||||| ||||||||||||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacg 46033834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 31735882 - 31735940
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaa 347  Q
    |||||| |||||||||||||| |||||| |||||||||||  ||| |||||||||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 7727906 - 7727971
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||| ||||||||| ||||||  |||| ||||||||||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgaca 7727971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 36208173 - 36208238
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| ||||||||||||||||||||| ||| ||||||    |||||||||||||||||| ||||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgaca 36208238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 40846213 - 40846152
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 352  Q
    |||| |||||||||| ||| |||||| ||||||||||||  |||||| ||||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatct 40846152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 2318338 - 2318279
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgac 355  Q
    |||||||||  ||| || ||| |||||| |||||| ||||||||||||||||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgac 2318279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 27564838 - 27564768
Alignment:
Q  288 tatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  27564838 tatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacg 27564768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 9474977 - 9474909
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 9474909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 2581915 - 2581982
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 2581982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 48716383 - 48716315
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacg 48716315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 3000319 - 3000386
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 3000386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 38632421 - 38632354
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacg 38632354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 47452422 - 47452353
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| |||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacg 47452353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 8346488 - 8346421
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacg 8346421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 38595154 - 38595221
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 38595221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 41758805 - 41758872
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacg 41758872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 51898783 - 51898716
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 51898716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 37649196 - 37649265
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacg 37649265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 32813247 - 32813314
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacg 32813314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 50591101 - 50591035
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 50591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 5959100 - 5959035
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgaca 5959035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 44548473 - 44548409
Alignment:
Q  294 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||| | |||| |||||||||||| ||||| ||||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacg 44548409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 50630458 - 50630525
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||| |||||||| |||||||||| | ||||  ||||||||||||||||||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacg 50630525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 26440732 - 26440801
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||| | |||| ||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  26440732 atgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacg 26440801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 43132 - 43199
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||  |||||  | ||||||| | ||||||||||||||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacg 43199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 23597191 - 23597124
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| | |||| |||||||||||  ||||| ||||||| ||||||||||||||    
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacg 23597124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 26274435 - 26274498
Alignment:
Q  294 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 357  Q
    ||||||||||||||||||||||  |||||||||| | ||||||| ||||| |||||||||||||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacac 26274498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 49811627 - 49811560
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||| ||||||| |||||| || ||||||||| ||||||| ||||||||||||||||||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacg 49811560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 11152476 - 11152411
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||| ||||||||||| |||| |||||||||||| || |||| ||||||||||||||||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacg 11152411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 41608594 - 41608528
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||| |||||||||| ||| |||||| ||||||||||||  ||||||| |||||||||||||||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 44453984 - 44454044
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||||||||||||||| |||  |||||||||| || |||| ||||||||||||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgaca 44454044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 37926538 - 37926471
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||| | | |||| |||||||||| ||||| ||||||||| ||||||||||||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacg 37926471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 45044670 - 45044595
Alignment:
Q  281 ttttgtttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||| |||| |||||||||| |   |||||| |||||||||||| ||||||||||| ||||||||||||||    
T  45044670 ttttttttaagagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgaca 45044595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 47748441 - 47748507
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||||| |||||||||| | |||||||| ||||||||||||  |||||||||| | ||||||||||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacacc-cttgacacccatataaaaatctgaca 47748507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 34340133 - 34340072
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||| ||||| ||| ||||||||| ||||   ||||||||||||||||||||    
T  34340133 atgatacatagacactcttaggtggtaatacacctgttga-tgccacacaaaaatctgacacg 34340072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 13414791 - 13414828
Alignment:
Q  321 caatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacg 13414828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 17598552 - 17598621
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacg 17598621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 32869673 - 32869745
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  32869673 tttatgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 32869745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 29857827 - 29857894
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacg 29857894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 22880755 - 22880691
Alignment:
Q  294 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacg 22880691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 31109501 - 31109433
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||  |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  31109501 tgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacg 31109433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 6209565 - 6209498
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||||| ||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacg 6209498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 11427616 - 11427685
Alignment:
Q  291 gagtaatgatacatagacaccct--tagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacg 11427685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 15508125 - 15508059
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 15990142 - 15990077
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15990077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 30341460 - 30341395
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 30341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 31953132 - 31953065
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||||||||||| ||||||| |||||| ||||||||||||  |||||||||||| ||||||||||||    
T  31953132 atgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 31953065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 31976248 - 31976315
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| |||||| |||||||| ||| ||| ||||||||||||||||||||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacg 31976315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 15832577 - 15832644
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| |||| || ||||| | | |||||||||||||||||||| |||||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacg 15832644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 28536582 - 28536519
Alignment:
Q  295 aatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||| ||| |||||| |||||||||| |  |||||||||||||||||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg 28536519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 31110859 - 31110794
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||| |||||| |||||||||||| |||||||  | |||||||||||||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacg 31110794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 9379807 - 9379745
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||| ||||||||| ||||||| |  |||||||||| |||||||| |||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacg 9379745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 357
Target Start/End: Original strand, 946377 - 946442
Alignment:
Q  292 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 357  Q
    ||||| |||||||||||| |||||| ||  |||||||| ||||||||| || ||||||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacac 946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 22422118 - 22422053
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||||||||||||||||| |||||| |||||||| | || ||||||| || |||||| |||||||    
T  22422118 gagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 4231547 - 4231615
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||| ||||| |||| ||| | |||| ||||||||||||  ||| |||||||||||||||||||||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacg 4231615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 23128224 - 23128160
Alignment:
Q  294 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||| ||||||||| |||  ||  |||||| | ||||||||||||||||||||||||||||    
T  23128224 taatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacg 23128160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 12732482 - 12732549
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||  ||||  |||||||| |    |||||||||||||||||||||||||||    
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacg 12732549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 4029 - 4096
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacg 4096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 41236347 - 41236414
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacg 41236414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 6034043 - 6034109
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 6034109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 11511563 - 11511495
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacg 11511495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 480547 - 480480
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacg 480480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 23608235 - 23608302
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacg 23608302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 48183149 - 48183082
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacg 48183082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 50052528 - 50052461
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 50052461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 3481652 - 3481720
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 357  Q
    ||||||||||||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacac 3481720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 50526272 - 50526204
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacg 50526204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 54473634 - 54473566
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacg 54473566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 29234345 - 29234278
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||||||||||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacg 29234278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 29239886 - 29239953
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| |||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacg 29239953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 40574777 - 40574846
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||| |||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 24995207 - 24995140
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacg 24995140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 42044467 - 42044400
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||||||||||||||||||||||||| |||||||||| | ||  ||||||||||||||||||||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacg 42044400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 55475191 - 55475256
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 31910191 - 31910258
Alignment:
Q  290 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 357  Q
    ||||| |||||||||||||| |||||| || ||||||||  |||||||||||||||||||||||||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacac 31910258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 19670816 - 19670751
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| ||||||||||||  ||||||| |||||||||||||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 19670751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 29548064 - 29547994
Alignment:
Q  286 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||| |||||||||| ||| |||||| |||||||||| |  |||||||||||||||||||||||||    
T  29548064 tttaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 32766958 - 32767023
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgaca 32767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 47986208 - 47986273
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||||||||| |||||||||| |  |||||| ||||||||||||||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgaca 47986273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 50813992 - 50813927
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| |||| ||||| ||| ||||||||  |||||||||||||||||||||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgaca 50813927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 17983825 - 17983778
Alignment:
Q  309 acccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 17983778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 29977885 - 29977952
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||| | | || ||| ||||||||||||  || ||||||||||||||||||||||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacg 29977952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 47104544 - 47104611
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||| |||||||  |||||||| ||||||||  | |||||||||||||||||| |||||||    
T  47104544 gagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacg 47104611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 18924604 - 18924530
Alignment:
Q  282 tttgtttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||| ||||| |||| | |||||||| ||||||||||||  |||| | ||||||||||||||||||    
T  18924604 tttgattatgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgaca 18924530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| ||| |||||| |||||||||| | ||||||||| ||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 29589831 - 29589777
Alignment:
Q  299 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 354  Q
    ||||||| |||||||||| || |||||||||  |||||||||||||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctga 29589777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 53352660 - 53352599
Alignment:
Q  296 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| | ||||||||   ||| ||||| ||||||||||||||||||    
T  53352660 atgatacatagacacccttaggt-gcaatacattctttaacacctacacaaaaatctgacacg 53352599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 28480360 - 28480303
Alignment:
Q  299 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||||||||| |||||| || |||||||| | || |||| |||||||||||||||||    
T  28480360 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 28480303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 28481235 - 28481178
Alignment:
Q  299 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||||||||| |||||| || |||||||| | || |||| |||||||||||||||||    
T  28481235 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 28481178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 28482110 - 28482053
Alignment:
Q  299 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    ||||||||||| |||||| || |||||||| | || |||| |||||||||||||||||    
T  28482110 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 28482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 44536845 - 44536781
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||| |||||||||| ||||  |||| |||||||||||| || |||| ||||||||||||||||||    
T  44536845 gagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgaca 44536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 1031 - 962
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| | |||| |||||||||||| ||| ||| ||||||||||| ||||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacg 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 1031 - 962
Alignment:
Q  289 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    ||||||||||||||||||||| | |||| |||||||||||| ||| ||| ||||||||||| ||||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacg 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 10209 - 10142
Alignment:
Q  291 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacacg 358  Q
    |||| |||||||||||||||| |||| |||||||||| | ||||||| ||||| ||||||||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacg 10142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 152514 - 152563
Alignment:
Q  307 acacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 356  Q
    |||||||| | ||||||||||||  |||||||||||||||||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgaca 152563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University