View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12968_low_11 (Length: 464)

Name: NF12968_low_11
Description: NF12968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12968_low_11
NF12968_low_11
[»] chr7 (45 HSPs)
chr7 (22-205)||(11897718-11897901)
chr7 (209-368)||(28112862-28113021)
chr7 (209-368)||(36392204-36392364)
chr7 (204-368)||(15309810-15309974)
chr7 (237-369)||(33603308-33603440)
chr7 (209-361)||(34142500-34142652)
chr7 (209-369)||(45361703-45361863)
chr7 (229-368)||(45257865-45258004)
chr7 (209-368)||(48194466-48194625)
chr7 (209-361)||(40590391-40590543)
chr7 (221-369)||(28977649-28977797)
chr7 (209-368)||(10524166-10524324)
chr7 (209-368)||(46596965-46597122)
chr7 (229-368)||(20566168-20566307)
chr7 (228-356)||(15070453-15070581)
chr7 (209-364)||(41623723-41623868)
chr7 (209-368)||(17840725-17840883)
chr7 (209-368)||(46860590-46860739)
chr7 (229-331)||(34139600-34139702)
chr7 (228-366)||(42503915-42504053)
chr7 (209-296)||(10225750-10225837)
chr7 (229-343)||(9365778-9365892)
chr7 (228-366)||(22292573-22292711)
chr7 (206-366)||(4231093-4231253)
chr7 (393-453)||(41623629-41623689)
chr7 (393-448)||(10225618-10225673)
chr7 (230-356)||(20876415-20876541)
chr7 (228-358)||(43349738-43349868)
chr7 (393-452)||(42683954-42684013)
chr7 (229-339)||(17184933-17185043)
chr7 (299-452)||(21185794-21185948)
chr7 (299-368)||(48272290-48272359)
chr7 (299-367)||(42684043-42684111)
chr7 (210-368)||(48314753-48314901)
chr7 (203-366)||(1640961-1641112)
chr7 (309-369)||(10225698-10225758)
chr7 (393-452)||(34142400-34142464)
chr7 (207-340)||(42736731-42736864)
chr7 (411-452)||(40590285-40590326)
chr7 (415-452)||(45361925-45361962)
chr7 (210-249)||(48272380-48272419)
chr7 (209-263)||(42684137-42684191)
chr7 (415-452)||(9365977-9366014)
chr7 (415-452)||(10524065-10524102)
chr7 (415-452)||(17840628-17840665)
[»] chr4 (48 HSPs)
chr4 (209-452)||(33383884-33384127)
chr4 (209-452)||(955871-956113)
chr4 (209-448)||(51426616-51426856)
chr4 (209-369)||(1044380-1044538)
chr4 (209-369)||(9491118-9491278)
chr4 (209-369)||(56140524-56140684)
chr4 (209-368)||(44558728-44558887)
chr4 (209-364)||(37868107-37868262)
chr4 (209-368)||(39590402-39590561)
chr4 (209-368)||(49572736-49572894)
chr4 (206-368)||(4783722-4783881)
chr4 (209-368)||(6280937-6281096)
chr4 (229-368)||(21015838-21015977)
chr4 (209-368)||(34528244-34528403)
chr4 (209-368)||(34151693-34151853)
chr4 (229-368)||(28083825-28083964)
chr4 (246-368)||(49422206-49422328)
chr4 (229-368)||(40352435-40352574)
chr4 (229-368)||(41793463-41793602)
chr4 (207-366)||(51026132-51026290)
chr4 (229-368)||(55799364-55799503)
chr4 (229-366)||(36774809-36774946)
chr4 (207-343)||(43887577-43887712)
chr4 (229-343)||(6175976-6176090)
chr4 (229-343)||(49096178-49096292)
chr4 (393-452)||(44558918-44558977)
chr4 (204-336)||(4909896-4910028)
chr4 (396-452)||(9491015-9491071)
chr4 (203-263)||(21410205-21410265)
chr4 (210-365)||(37959568-37959713)
chr4 (389-448)||(34151873-34151932)
chr4 (229-343)||(22438379-22438493)
chr4 (204-326)||(47312927-47313049)
chr4 (295-366)||(9718977-9719048)
chr4 (207-258)||(21171257-21171307)
chr4 (404-453)||(241785-241834)
chr4 (415-452)||(55799267-55799304)
chr4 (207-255)||(24076809-24076857)
chr4 (389-452)||(34528426-34528494)
chr4 (393-424)||(49572674-49572705)
chr4 (242-366)||(2774736-2774861)
chr4 (415-452)||(6176175-6176212)
chr4 (415-452)||(21016037-21016074)
chr4 (415-452)||(41793662-41793699)
chr4 (415-452)||(49096056-49096093)
chr4 (207-335)||(8866830-8866958)
chr4 (416-452)||(37959460-37959496)
chr4 (396-452)||(39590306-39590361)
[»] chr5 (45 HSPs)
chr5 (209-369)||(25499721-25499881)
chr5 (209-452)||(34682336-34682578)
chr5 (209-368)||(541006-541162)
chr5 (228-368)||(5894-6034)
chr5 (209-369)||(41798898-41799059)
chr5 (238-369)||(35926466-35926597)
chr5 (211-368)||(41201809-41201966)
chr5 (209-368)||(8574801-8574959)
chr5 (209-368)||(11348336-11348494)
chr5 (229-368)||(19035337-19035476)
chr5 (229-343)||(27660039-27660153)
chr5 (228-368)||(11028839-11028979)
chr5 (228-368)||(38855546-38855686)
chr5 (210-452)||(18309809-18310040)
chr5 (229-365)||(8539381-8539516)
chr5 (209-323)||(30887256-30887371)
chr5 (207-366)||(36348708-36348866)
chr5 (229-366)||(7483857-7483994)
chr5 (211-337)||(1398685-1398811)
chr5 (229-366)||(1696461-1696598)
chr5 (229-366)||(41088233-41088370)
chr5 (393-448)||(25499631-25499686)
chr5 (229-368)||(30710995-30711133)
chr5 (228-371)||(6791814-6791963)
chr5 (231-366)||(1973095-1973230)
chr5 (211-368)||(3602994-3603140)
chr5 (204-366)||(23190679-23190841)
chr5 (297-366)||(20199996-20200065)
chr5 (304-366)||(40937159-40937221)
chr5 (207-264)||(7401807-7401864)
chr5 (393-452)||(41201996-41202054)
chr5 (209-263)||(35566967-35567021)
chr5 (396-452)||(541205-541260)
chr5 (396-452)||(1398913-1398968)
chr5 (393-452)||(30710912-30710970)
chr5 (209-255)||(31239720-31239766)
chr5 (233-263)||(40937253-40937283)
chr5 (415-452)||(6094-6131)
chr5 (415-452)||(8539281-8539318)
chr5 (415-452)||(8575019-8575056)
chr5 (415-452)||(19035536-19035573)
chr5 (415-452)||(27660238-27660275)
chr5 (415-452)||(30887172-30887209)
chr5 (416-452)||(3602887-3602923)
chr5 (416-452)||(41799128-41799164)
[»] chr3 (68 HSPs)
chr3 (209-368)||(55267495-55267654)
chr3 (206-368)||(34645638-34645798)
chr3 (209-369)||(43478662-43478823)
chr3 (209-368)||(2267136-2267294)
chr3 (209-372)||(13894306-13894469)
chr3 (209-368)||(34691705-34691864)
chr3 (226-368)||(55205364-55205506)
chr3 (209-369)||(45098884-45099044)
chr3 (228-368)||(50998489-50998629)
chr3 (209-363)||(16484294-16484449)
chr3 (209-368)||(24700801-24700960)
chr3 (211-372)||(51693960-51694121)
chr3 (228-369)||(52567857-52567998)
chr3 (221-452)||(43571433-43571667)
chr3 (209-368)||(44490425-44490584)
chr3 (221-364)||(49217182-49217325)
chr3 (209-367)||(41805510-41805668)
chr3 (222-452)||(44223114-44223343)
chr3 (209-368)||(4002794-4002951)
chr3 (228-368)||(36136433-36136572)
chr3 (229-368)||(2645555-2645694)
chr3 (209-356)||(19440336-19440483)
chr3 (204-363)||(20374296-20374445)
chr3 (229-343)||(2950465-2950579)
chr3 (229-343)||(46406451-46406565)
chr3 (207-366)||(42321806-42321964)
chr3 (229-343)||(49138713-49138827)
chr3 (228-366)||(51017020-51017158)
chr3 (207-366)||(50457574-50457735)
chr3 (229-349)||(54391882-54392002)
chr3 (204-366)||(18441959-18442121)
chr3 (204-366)||(19487033-19487195)
chr3 (229-343)||(34051173-34051287)
chr3 (229-366)||(44929199-44929336)
chr3 (273-368)||(3493728-3493823)
chr3 (273-368)||(3497422-3497517)
chr3 (210-368)||(7247705-7247853)
chr3 (250-364)||(49275125-49275239)
chr3 (304-368)||(2430112-2430176)
chr3 (396-452)||(43478560-43478616)
chr3 (235-366)||(27096093-27096224)
chr3 (210-368)||(46345017-46345165)
chr3 (210-280)||(2432866-2432936)
chr3 (229-366)||(11377345-11377482)
chr3 (210-368)||(41579568-41579717)
chr3 (299-366)||(34470483-34470550)
chr3 (402-452)||(2430016-2430066)
chr3 (393-451)||(49217357-49217415)
chr3 (415-452)||(24701019-24701056)
chr3 (207-255)||(30194379-30194426)
chr3 (230-366)||(51011672-51011808)
chr3 (415-452)||(2645740-2645777)
chr3 (415-452)||(3493884-3493921)
chr3 (415-452)||(3497578-3497615)
chr3 (305-366)||(10051779-10051840)
chr3 (415-452)||(34051051-34051088)
chr3 (415-452)||(36136336-36136373)
chr3 (415-452)||(46406329-46406366)
chr3 (415-452)||(49138912-49138949)
chr3 (415-452)||(50998392-50998429)
chr3 (415-452)||(51694178-51694215)
chr3 (415-452)||(52568063-52568100)
chr3 (415-452)||(54391766-54391803)
chr3 (396-452)||(34691909-34691964)
chr3 (396-424)||(41805438-41805466)
chr3 (416-452)||(49611686-49611722)
chr3 (396-424)||(55205554-55205582)
chr3 (396-424)||(55267699-55267727)
[»] chr2 (38 HSPs)
chr2 (209-452)||(8268501-8268743)
chr2 (209-368)||(43493119-43493278)
chr2 (209-368)||(41497552-41497711)
chr2 (209-368)||(35493176-35493335)
chr2 (209-368)||(40675817-40675975)
chr2 (209-452)||(23409254-23409495)
chr2 (209-452)||(19470037-19470282)
chr2 (209-369)||(3943024-3943185)
chr2 (209-369)||(16583427-16583588)
chr2 (209-369)||(34639147-34639307)
chr2 (228-366)||(23719444-23719582)
chr2 (228-366)||(24107116-24107254)
chr2 (209-369)||(29090655-29090816)
chr2 (209-368)||(23786204-23786364)
chr2 (228-368)||(28476902-28477042)
chr2 (229-368)||(3935962-3936101)
chr2 (229-368)||(17426200-17426339)
chr2 (229-368)||(22003236-22003375)
chr2 (228-366)||(5422057-5422195)
chr2 (228-368)||(39798541-39798681)
chr2 (229-358)||(10358896-10359025)
chr2 (229-343)||(43984161-43984275)
chr2 (229-366)||(34520065-34520202)
chr2 (396-452)||(43493012-43493068)
chr2 (207-366)||(37311041-37311199)
chr2 (211-363)||(14181673-14181815)
chr2 (396-452)||(35493080-35493136)
chr2 (393-448)||(40676007-40676062)
chr2 (229-287)||(45435122-45435180)
chr2 (299-368)||(2917842-2917911)
chr2 (389-452)||(23786385-23786453)
chr2 (295-366)||(17537320-17537391)
chr2 (389-452)||(41497736-41497807)
chr2 (415-452)||(3936161-3936198)
chr2 (415-452)||(16583333-16583370)
chr2 (415-452)||(17426103-17426140)
chr2 (416-452)||(3942920-3942956)
chr2 (207-255)||(33405662-33405710)
[»] chr6 (28 HSPs)
chr6 (209-368)||(35019656-35019815)
chr6 (209-369)||(29076157-29076317)
chr6 (209-369)||(29109690-29109850)
chr6 (209-369)||(29111130-29111290)
chr6 (209-368)||(34801583-34801743)
chr6 (209-369)||(29068099-29068259)
chr6 (209-369)||(29083346-29083506)
chr6 (255-452)||(32026087-32026284)
chr6 (209-364)||(13616320-13616475)
chr6 (229-368)||(32691284-32691423)
chr6 (210-368)||(13404467-13404625)
chr6 (211-365)||(14124556-14124710)
chr6 (229-368)||(27641553-27641692)
chr6 (229-343)||(11693887-11694001)
chr6 (393-452)||(34801777-34801836)
chr6 (203-313)||(17126862-17126973)
chr6 (229-343)||(6206920-6207034)
chr6 (393-452)||(29068013-29068072)
chr6 (393-452)||(29083259-29083318)
chr6 (393-452)||(29109602-29109661)
chr6 (229-366)||(12398521-12398658)
chr6 (393-434)||(14124486-14124527)
chr6 (389-452)||(13616502-13616564)
chr6 (225-356)||(30763412-30763543)
chr6 (389-452)||(32691444-32691506)
chr6 (415-452)||(6206798-6206835)
chr6 (415-452)||(11693765-11693802)
chr6 (396-424)||(35019857-35019885)
[»] chr1 (54 HSPs)
chr1 (209-368)||(49924936-49925095)
chr1 (236-452)||(41803783-41804000)
chr1 (209-368)||(14172167-14172326)
chr1 (209-368)||(51271425-51271584)
chr1 (209-363)||(44598745-44598899)
chr1 (209-369)||(27485113-27485272)
chr1 (209-368)||(36911530-36911690)
chr1 (209-366)||(49398307-49398463)
chr1 (209-368)||(42570201-42570361)
chr1 (209-369)||(44336329-44336489)
chr1 (209-368)||(26633606-26633766)
chr1 (221-367)||(13148889-13149029)
chr1 (230-369)||(29760604-29760743)
chr1 (228-368)||(13633964-13634104)
chr1 (209-368)||(35524818-35524967)
chr1 (227-332)||(29437890-29437995)
chr1 (229-368)||(19161991-19162130)
chr1 (229-368)||(49428996-49429135)
chr1 (210-368)||(6437374-6437532)
chr1 (228-366)||(23344242-23344380)
chr1 (228-366)||(38043549-38043687)
chr1 (229-366)||(39855589-39855727)
chr1 (204-369)||(24362363-24362525)
chr1 (228-343)||(48228170-48228286)
chr1 (229-363)||(33285790-33285924)
chr1 (228-366)||(14440872-14441009)
chr1 (207-285)||(26497804-26497882)
chr1 (393-452)||(13974475-13974534)
chr1 (297-368)||(18974965-18975036)
chr1 (207-366)||(49260007-49260164)
chr1 (207-325)||(12789787-12789904)
chr1 (304-368)||(46141941-46142005)
chr1 (296-353)||(13285196-13285253)
chr1 (389-452)||(14172349-14172420)
chr1 (402-448)||(18974869-18974915)
chr1 (228-366)||(40531797-40531935)
chr1 (206-255)||(16530628-16530677)
chr1 (415-452)||(48228053-48228090)
chr1 (207-255)||(39063288-39063336)
chr1 (416-452)||(49398197-49398233)
chr1 (211-270)||(13287484-13287543)
chr1 (393-424)||(46142032-46142063)
chr1 (417-452)||(51271351-51271386)
chr1 (214-280)||(19260969-19261035)
chr1 (211-255)||(14771204-14771249)
chr1 (415-452)||(19162191-19162228)
chr1 (415-452)||(27485333-27485370)
chr1 (415-452)||(44336548-44336585)
chr1 (416-453)||(49428889-49428926)
chr1 (416-452)||(6437267-6437303)
chr1 (416-452)||(29760815-29760851)
chr1 (416-452)||(36911421-36911457)
chr1 (396-424)||(42570381-42570409)
chr1 (416-452)||(42570409-42570445)
[»] chr8 (32 HSPs)
chr8 (211-369)||(41276719-41276877)
chr8 (230-452)||(41855464-41855686)
chr8 (209-369)||(26455509-26455669)
chr8 (209-368)||(22550699-22550858)
chr8 (209-368)||(28168437-28168596)
chr8 (209-364)||(44052064-44052219)
chr8 (209-368)||(42605069-42605228)
chr8 (230-368)||(40703995-40704132)
chr8 (228-368)||(41016512-41016652)
chr8 (229-368)||(45066196-45066335)
chr8 (229-368)||(483915-484054)
chr8 (229-368)||(15030983-15031121)
chr8 (396-452)||(42604964-42605020)
chr8 (229-366)||(26488303-26488440)
chr8 (229-366)||(38032310-38032447)
chr8 (299-368)||(38872776-38872845)
chr8 (299-369)||(18438793-18438864)
chr8 (294-366)||(19241142-19241214)
chr8 (294-366)||(19314326-19314398)
chr8 (295-366)||(26488185-26488256)
chr8 (229-287)||(22519478-22519536)
chr8 (402-452)||(38872678-38872728)
chr8 (396-452)||(22550602-22550657)
chr8 (415-452)||(484114-484151)
chr8 (415-452)||(26455412-26455449)
chr8 (415-452)||(41016712-41016749)
chr8 (415-452)||(41276622-41276659)
chr8 (416-452)||(18438938-18438974)
chr8 (416-452)||(24862884-24862920)
chr8 (416-452)||(28168330-28168366)
chr8 (295-343)||(31170581-31170629)
chr8 (396-424)||(40703923-40703951)
[»] scaffold0176 (4 HSPs)
scaffold0176 (209-361)||(3425-3577)
scaffold0176 (229-331)||(525-627)
scaffold0176 (393-452)||(3325-3389)
scaffold0176 (415-452)||(395-432)
[»] scaffold0199 (1 HSPs)
scaffold0199 (209-368)||(10758-10916)
[»] scaffold0859 (1 HSPs)
scaffold0859 (205-366)||(2004-2165)
[»] scaffold0094 (1 HSPs)
scaffold0094 (229-368)||(39-178)
[»] scaffold0014 (1 HSPs)
scaffold0014 (229-368)||(84679-84818)
[»] scaffold0494 (1 HSPs)
scaffold0494 (228-368)||(5429-5569)
[»] scaffold0258 (1 HSPs)
scaffold0258 (207-264)||(10246-10303)
[»] scaffold0192 (3 HSPs)
scaffold0192 (299-368)||(16561-16630)
scaffold0192 (211-255)||(16483-16527)
scaffold0192 (416-452)||(16699-16735)
[»] scaffold0618 (1 HSPs)
scaffold0618 (210-280)||(3965-4035)
[»] scaffold0025 (1 HSPs)
scaffold0025 (207-255)||(154368-154417)


Alignment Details
Target: chr7 (Bit Score: 152; Significance: 3e-80; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 22 - 205
Target Start/End: Original strand, 11897718 - 11897901
Alignment:
Q  22 tactaacacacatggcgctatattcaccagattttgtcgaatgaccttttggtaatatggttaacttcagccgtaaaatagttttggtttgcttcgatgt 121  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  11897718 tactaacacacatggcgctatgttaaccagattttgtcgaatgaccttttggtaatatggttaacttctgccgtaaaatagttttggcatgcttcgatgt 11897817  T
Q  122 tttcgaccaaacaatctttcctccatgtagttattctttgatggagagaagaaggcactacaccaatttcgtgtatccattttg 205  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11897818 tttcgaccaaacgatctttcctccatgtagttattatttgatggagagaggaaggcactacaccaatttcgtgtatccattttg 11897901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 28112862 - 28113021
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || ||||||||||||||||||||||| |||||||| |||||  || |||||||||||| ||||||||||||||||||||| ||| |    
T  28112862 tgttataagaacataacagacataggagtttccaaaactctattgttacattttttattctcctaggtgcgattttgagcaatttcaagtcattccaaac 28112961  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  28112962 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 28113021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 36392204 - 36392364
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacg-tttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaag 307  Q
    ||||||||| | | || ||||||||||||||||||||||||||||||||| ||||| | | |||||||||||| ||||||||||||||||||||| ||||    
T  36392204 tgttataagtacataacagacataggagtttccaaaactccattgttacgattttttgatctcctaggtgcgattttgagcaatttcaagtcattccaag 36392303  T
Q  308 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||||| |||||||||||| |||  ||||||||||| |||||||||||    
T  36392304 ccaatttcaatcacaaaaacaagtaagtttttagaatcctattgcattgttgttttgtggt 36392364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 204 - 368
Target Start/End: Complemental strand, 15309974 - 15309810
Alignment:
Q  204 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 303  Q
    |||||| |||||| |  |||| ||||||||||||||||||||||||||||||  |||||||||| |||||||||| | ||||||  |||||||||||||     
T  15309974 tgatctattataaaatcagaacagacataggagtttccaaaactccattgttttgtttttggttctcctaggtgcaattttgagtcatttcaagtcattc 15309875  T
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||||||||| ||||||||||||| ||   |||||||||| |||||||||||    
T  15309874 caagccaatttcaatcacaaaaacaagtaagtttttttaatcttattgcattgttgttttgtggt 15309810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 33603308 - 33603440
Alignment:
Q  237 tttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagtt 336  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||| ||| ||||||||||||| |||| |||||||||||||||||| |||||| ||    
T  33603308 tttccaaaactccattgttacctttttggttctcctaggtgcgattttcagccatttcaagtcattccaagtcaatttcaatcacaaaaacaagtaaatt 33603407  T
Q  337 ttttgaactctattgcattgctgttttgtggtt 369  Q
    ||| |||  ||||||||||||||||||||||||    
T  33603408 tttagaatcctattgcattgctgttttgtggtt 33603440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 209 - 361
Target Start/End: Complemental strand, 34142652 - 34142500
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||||||  || |||| | ||||| |||||||||||| ||| |||| |||||    
T  34142652 tgttataagaatataacagacataggagtttccaaaactccattgttgcgttttttattctccttgctgcgattttgagcaatttaaagccattccaagc 34142553  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtt 361  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| ||||    
T  34142552 caatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgtt 34142500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 209 - 369
Target Start/End: Original strand, 45361703 - 45361863
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| | | ||| |||||||| ||||||| |||||||| ||||  || |    
T  45361703 tgttataagaacagaacagacataggagtttccaaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagccattctaaac 45361802  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||| ||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  45361803 caatttcaatcataaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 45361863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 45258004 - 45257865
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||| ||||||| |||||||| || ||| |||||||| ||||||  |||| |||||||||||||||||||||||||||||||| |    
T  45258004 cataggagtttccaaaacttcattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagtcatttcaagccaatttcaatcacaaaaaca 45257905  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  45257904 agtaagttttttgaatcctattgcattgttgctttgtggt 45257865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 48194625 - 48194466
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || ||||||||||||||||||||||| |||||| |||||||| ||||||| | ||||| |||||||||||| |||  ||| |||||    
T  48194625 tgttataagaacataacagacataggagtttccaaaactctattgttgcgtttttgattttccttgctgcgattttgagcaatttgaagctattccaagc 48194526  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
     ||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  48194525 gaatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtggt 48194466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 209 - 361
Target Start/End: Complemental strand, 40590543 - 40590391
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||| | | ||| |||||||| ||||||| |||||||| |||| |||||    
T  40590543 tgttataagaacagaacagacataggagtttccaaaattccattgctacgttttttgatctccaaggtgcgattttgagctatttcaagccattccaagc 40590444  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtt 361  Q
    ||||||||||| |||||| ||||||||||||| ||  ||||||||||| ||||    
T  40590443 caatttcaatcgcaaaaacaagtaagtttttttaatcctattgcattgttgtt 40590391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 28977649 - 28977797
Alignment:
Q  221 agaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatca 320  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| | | | | |||||||| ||||||| ||||||||||||| ||| |||||||||||||    
T  28977649 agaacagacataggagtttccaaaactctattgttacgatttttgatcttcaaggtgcgattttgagctatttcaagtcattccaatccaatttcaatca 28977748  T
Q  321 caaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    || ||| ||||||||||||| ||  ||||||||||| ||||||||||||    
T  28977749 cataaacaagtaagtttttttaatcctattgcattgttgttttgtggtt 28977797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 10524324 - 10524166
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| | ||||||||||||||||||||| | |||| |||||||  || ||| |||||||| ||||||  |||| |||||||| |||||    
T  10524324 tgttataagaacagaaca-acataggagtttccaaaactctaatgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtcattccaagc 10524226  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| || ||||||||    
T  10524225 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgctttgtggt 10524166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 46596965 - 46597122
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||  || |||| |||| || |||||||||||| ||| || |||||||    
T  46596965 tgttataagaacagaacagacatagaagtttccaaaactccattgttgcgttttttattctccttggtgagattttgagcaatttgaagcca-ttcaagc 46597063  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| || |||||||||| ||  ||||||||||| |||||||||||    
T  46597064 caatttcaatcacaaaaacaactaagtttttt-aatcctattgcattgttgttttgtggt 46597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 20566307 - 20566168
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  20566307 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 20566208  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  20566207 agtaagttttttgaatcctattgcattgttgctttgtggt 20566168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 356
Target Start/End: Original strand, 15070453 - 15070581
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| ||||||||  | ||| || ||||| ||||||  |||| ||| |||| |||||||||||||||||||||||     
T  15070453 acataggagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgagtcatttgaagacattacaagccaatttcaatcacaaaaac 15070552  T
Q  328 aagtaagttttttgaactctattgcattg 356  Q
    ||||||||||||| ||  |||||||||||    
T  15070553 aagtaagtttttttaatcctattgcattg 15070581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 364
Target Start/End: Complemental strand, 41623868 - 41623723
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||| | |||| ||||||||||||||| ||||||||||||| |||||||| | | |||||| ||||| |||||||||||||||||              
T  41623868 tgttataagtacagaacagacataggagtttcgaaaactccattgtcacgttttttgatctcctagatgcgattttgagcaatttcaagt---------- 41623779  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttg 364  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||    
T  41623778 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttg 41623723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 17840883 - 17840725
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| || ||||||||| ||||||||| ||||||| |||||||| || ||| |||||||| |||  |  |||| |||||||| ||| |    
T  17840883 tgttataagaacagaacag-cataggagtctccaaaacttcattgttgcgtttttgattatccaaggtgcgattttaggtcatttgaagtcattccaatc 17840785  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||  || ||||||||    
T  17840784 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattcttgctttgtggt 17840725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 46860590 - 46860739
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| || |||| | | |||||||||||| ||| | |||||  |||          |    
T  46860590 tgttataagaacagaacagacataggagtttccaaaactccattgttgcggtttttgatctcctaggtgcgatttttaacaattctaag----------c 46860679  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  46860680 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 46860739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 34139702 - 34139600
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| |||||||| ||||||||||||||||||||||| |    
T  34139702 cataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatcacaaaaaca 34139603  T
Q  329 agt 331  Q
    |||    
T  34139602 agt 34139600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 42503915 - 42504053
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| ||||||||  | ||| || ||||| ||||||  |||| ||| ||||  ||| ||||||||||||||||||     
T  42503915 acataggagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgagtcatttgaagacattagaagtcaatttcaatcacaaaaac 42504014  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||| ||  ||||||||||| || ||||||    
T  42504015 aagtaagtttttttaatcctattgcattgttgctttgtg 42504053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 10225837 - 10225750
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaa 296  Q
    ||||||||||||||||   |||||||||||||||||||||||||||| |||||||| || |||||||||| | |||||||||||||||    
T  10225837 tgttataagaatagaaccaacataggagtttccaaaactccattgttgcgtttttgattctcctaggtgcaattttgagcaatttcaa 10225750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 9365778 - 9365892
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  9365778 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 9365877  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  9365878 agtaagttttttgaa 9365892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 366
Target Start/End: Complemental strand, 22292711 - 22292573
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||| ||||||||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||||||||||||| |||||||      
T  22292711 acataggagtttccaaaaatccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaatc 22292612  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||||||  ||||||| ||||| |||||||    
T  22292611 aagtaagttttttgaatcctattgcgttgctattttgtg 22292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 366
Target Start/End: Complemental strand, 4231253 - 4231093
Alignment:
Q  206 atctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttca 305  Q
    |||||||||||||| |||| |||||||||| ||||||||| | |||| || |||||||||  ||| ||||||||| ||| | |||    |||||||| ||    
T  4231253 atctgttataagaacagaacagacataggaatttccaaaatttcattattgcgtttttggaattcttaggtgcgattttcaccaagcataagtcattcca 4231154  T
Q  306 agccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||| |||||||  ||||||||| ||   |  |||||||||||||||||||||    
T  4231153 agccaatttcaagcacaaaatcaagtaagttgttatcatcctattgcattgctgttttgtg 4231093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 41623689 - 41623629
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaata 453  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  41623689 aatttcgattatataggttttattgattttatgatatgttaggatagtttaggttagaata 41623629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 10225673 - 10225618
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggtta 448  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10225673 aatttcgattatataggttttattgattttatgatatgttaggataatttaggtta 10225618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 356
Target Start/End: Original strand, 20876415 - 20876541
Alignment:
Q  230 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 329  Q
    |||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||||||||| ||| |||||||  ||    
T  20876415 ataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccattccaagccaattccaagcacaaaatcaa 20876514  T
Q  330 gtaagttttttgaactctattgcattg 356  Q
    ||||||||||||||  |||||||||||    
T  20876515 gtaagttttttgaatcctattgcattg 20876541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 358
Target Start/End: Original strand, 43349738 - 43349868
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||  ||||||||||||| |||||||      
T  43349738 acataggagtttccaaaactccattgttacgttttttggttccataggtgcgaatttcacaaaccataagccattcgaagccaatttcaagcacaaaatc 43349837  T
Q  328 aagtaagttttttgaactctattgcattgct 358  Q
    ||||||||||||||||  ||||||| |||||    
T  43349838 aagtaagttttttgaatcctattgcgttgct 43349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 42684013 - 42683954
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  42684013 aattttgattatataggttttattgattttatgatatgttaggatagtttaggttagaat 42683954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 339
Target Start/End: Complemental strand, 17185043 - 17184933
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||||| ||||| | || | ||||||||||||| |  || |  ||| |||| ||||||||||||||||||||||  |    
T  17185043 cataggagtttccaaaactccattgttacattttttgcttccataggtgcgaatttcacaaactataagccattccaagccaatttcaatcacaaaatca 17184944  T
Q  329 agtaagttttt 339  Q
    | |||||||||    
T  17184943 attaagttttt 17184933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 452
Target Start/End: Original strand, 21185794 - 21185948
Alignment:
Q  299 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt-taaannnnnnnnnnnnnnnngttgaattt 397  Q
    |||||||||||||||||||||||||||| || |||||||||||||  ||||||||||| | |||||||||  ||                 ||| |||||    
T  21185794 catttcaagccaatttcaatcacaaaaacaaataagttttttgaatcctattgcattgttattttgtggtcgaattgtttgttttttttttgttaaattt 21185893  T
Q  398 cgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||  ||||||||||||||| ||||||||||||| |||||||||||||    
T  21185894 cgattatataaattttattgattttatgatatgttaggatagtttaggttagaat 21185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 48272359 - 48272290
Alignment:
Q  299 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||  ||||| ||||| |||||||||||    
T  48272359 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattacattgttgttttgtggt 48272290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 42684111 - 42684043
Alignment:
Q  299 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtgg 367  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||    
T  42684111 cattccaaaccaatttcaatcacaaaaataagtaagtttttttaatcctattgcattgttgttttgtgg 42684043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 368
Target Start/End: Original strand, 48314753 - 48314901
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 309  Q
    |||||||||| | || |||||||||||||||||||| ||||||||| || ||||  || || ||||||||| |||  ||          |||| |||||     
T  48314753 gttataagaacataacagacataggagtttccaaaattccattgttgcggttttcattctcttaggtgcgattttctgc----------cattccaagca 48314842  T
Q  310 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||    
T  48314843 aatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttgttttgtggt 48314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 366
Target Start/End: Original strand, 1640961 - 1641112
Alignment:
Q  203 ttgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatt 302  Q
    ||||||||||||||||| || |  ||| ||| ||||||||||||||||||||| |||||||||  ||| ||||||||| ||| |||          ||||    
T  1640961 ttgatctgttataagaacagca--gacttagaagtttccaaaactccattgttgcgtttttggaattcttaggtgcgattttcagc----------catt 1641048  T
Q  303 tcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
     ||||||||||||||||||||||  |||||||| |||||||   |||||||||| | |||||||    
T  1641049 ccaagccaatttcaatcacaaaatcaagtaagtgttttgaatcatattgcattggttttttgtg 1641112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 10225758 - 10225698
Alignment:
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||||||||||||||||| ||  ||| || |||| ||||||||||||    
T  10225758 caatttcaatcacaaaaataagtaagtttttttaatcctactgaattgttgttttgtggtt 10225698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 34142464 - 34142400
Alignment:
Q  393 aatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||||||      |||||||||||| |||||||||||||||||||||||||||    
T  34142464 aatttcgattatataggttcgattatattgattttatgatatgttaggataatttaggttagaat 34142400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 340
Target Start/End: Complemental strand, 42736864 - 42736731
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgt-ttttggttttcctaggtgcgaatttgagcaatttcaagtcatttca 305  Q
    ||||||||| ||| |||| || ||| ||||||||||||||||||||||||||| |||| | ||||  |||||||  ||| |||||     || |||| ||    
T  42736864 tctgttatatgaacagaacag-catcggagtttccaaaactccattgttacgtttttttgatttctcaggtgcgtttttcagcaaacatcagccattcca 42736766  T
Q  306 agccaatttcaatcacaaaaataagtaagtttttt 340  Q
    |||||||||||| |||||||  |||||||||||||    
T  42736765 agccaatttcaagcacaaaatcaagtaagtttttt 42736731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 452
Target Start/End: Complemental strand, 40590326 - 40590285
Alignment:
Q  411 tttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  40590326 tttattgatgttatgatatgttaggataatttaggttagaat 40590285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 45361925 - 45361962
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| |||||||||||||||||||||||||||    
T  45361925 ttgattttatgatatgttaggataatttaggttagaat 45361962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 48272419 - 48272380
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactcc 249  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  48272419 gttataagaacagaatagacatagtagtttccaaaactcc 48272380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 42684191 - 42684137
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgttttt 263  Q
    ||||||||||| | || ||||||| |||||||||||||||||||||| || ||||    
T  42684191 tgttataagaacataacagacatatgagtttccaaaactccattgttgcggtttt 42684137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 9365977 - 9366014
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  9365977 ttgattttatgatatgttaggatagtttaggttagaat 9366014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 10524102 - 10524065
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  10524102 ttgattttatgatatgttaggatattttaggttagaat 10524065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 17840665 - 17840628
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  17840665 ttgattttatgatatgttaggatagtttaggttagaat 17840628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 5e-66; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 209 - 452
Target Start/End: Original strand, 33383884 - 33384127
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | | |||||||||||| ||||||||||||||||||||| |||||    
T  33383884 tgttataagaagagaatagacataggagtttccaaaactccattgttatgttttttgatctcctaggtgcgattttgagcaatttcaagtcattccaagc 33383983  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatatag 408  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||  ||                ||| ||||||||||||||||    
T  33383984 caatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtggtcgaattgtttgtttttttttgttaaatttcgattatatag 33384083  T
Q  409 gttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  33384084 gttttattgattttatgatatgttaggatagtttaggttagaat 33384127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 209 - 452
Target Start/End: Original strand, 955871 - 956113
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||| |||||||| |||| | ||||||||||||||| | | |||||||||||| |||||||||||||||| |||| |||||    
T  955871 tgttataagaacagaacagacat-ggagtttctaaaaattcattgttacgttttttgatctcctaggtgcgattttgagcaatttcaagccattccaagc 955969  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatatag 408  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||  ||                ||| ||||||||||||||||    
T  955970 caatttcaatcacaaaaataagtaagttttttgaatcctattgcattgttgttttgtggtcgaattgtttgatatttgttgttaaatttcgattatatag 956069  T
Q  409 gttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  956070 gttttattgattttatgatatgttaggatagtttaggttagaat 956113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 209 - 448
Target Start/End: Original strand, 51426616 - 51426856
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggt--tttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||| | |||| |||||| |||||||||||||||||||||||||||||||  |  |||||||||||||| |||||||||||| |||||||| |||    
T  51426616 tgttataagtacagaacagacattggagtttccaaaactccattgttacgttttttttattttcctaggtgcgattttgagcaatttgaagtcattccaa 51426715  T
Q  307 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatat 406  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||  ||                ||| ||||| ||||||||    
T  51426716 gccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgctgttttgtggtcgaa-ttgttttttttttttgttaaattttgattatat 51426814  T
Q  407 aggttttattgattttataatatgttaggataatttaggtta 448  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  51426815 aggttttattgattttatgatatgttaggatagtttaggtta 51426856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 1044538 - 1044380
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||| ||||||| |||||||||||||||||||    
T  1044538 tgttataagaatagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagtcatttcaagc 1044439  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| || |||||||||| ||   |||||||||| ||||||| ||||    
T  1044438 caatttcaatcacaaaaacaaataagtttttttaa--ttattgcattgttgttttgcggtt 1044380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 9491278 - 9491118
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||| ||| ||| ||||||||||||| ||||     
T  9491278 tgttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttaagctatttcaagtcattccaagt 9491179  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| | ||||| ||||    
T  9491178 caatttcaatcacaaaaataagtaagtttttttaatcctattgcattgttattttgcggtt 9491118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 56140684 - 56140524
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||| ||||||  |||||||| |||| |||||    
T  56140684 tgttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagttatttcaagccattccaagc 56140585  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  56140584 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 56140524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 44558728 - 44558887
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||| || |||||||||| | ||| |||||||  |||||||| |||||    
T  44558728 tgttataagtacagaacagacataggagtttccaaaactccattattacgtttttgattctcctaggtgcaatttttagcaattcgaagtcattccaagc 44558827  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| | |||||||||    
T  44558828 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttattttgtggt 44558887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 209 - 364
Target Start/End: Complemental strand, 37868262 - 37868107
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||||| |||||   | ||| |||||||| ||||||| |||||||||||||||||||    
T  37868262 tgttataagaacagaacagatataggagtttccaaaactccattgttacatttttttatctccaaggtgcgattttgagctatttcaagtcatttcaagc 37868163  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttg 364  Q
    |||||||||||||||||| ||||||||||||  ||  ||||||||||| |||||||    
T  37868162 caatttcaatcacaaaaacaagtaagtttttgtaatcctattgcattgttgttttg 37868107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 39590561 - 39590402
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||||  || |||| | ||||| |||||||||||| ||| |||| ||||     
T  39590561 tgttataagaacagaacagacataggagtttccaaaactcaattgttgcgttttttattctccttgctgcgattttgagcaatttgaagccattccaagt 39590462  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||    
T  39590461 caatttcaatcacaaaaacaagtaagttttctgaaccctattgcattgttgttttgtggt 39590402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 49572894 - 49572736
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||| | |||| |||||||||| ||||||||||||||||||||||||||| | | || ||||||| | |||||||||||| |||||||| |||||    
T  49572894 tgttataagtacagaacagacataggaatttccaaaactccattgttacgttttttgatctcttaggtgcaattttgagcaattt-aagtcattccaagc 49572796  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| | |||||||||    
T  49572795 caatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttattttgtggt 49572736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 206 - 368
Target Start/End: Original strand, 4783722 - 4783881
Alignment:
Q  206 atctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttca 305  Q
    ||||||| |||||| |||| | ||||||||||||||||||||||||||||| |||||||||| ||||| || ||| |||||||||||||||| |||| ||    
T  4783722 atctgttttaagaacagaacaaacataggagtttccaaaactccattgttaggtttttggttgtcctaagtacgattttgagcaatttcaagccattcca 4783821  T
Q  306 agccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||| ||||||||||||||||| ||||   |||||||||   |||||||||| |||||||||||    
T  4783822 agctaatttcaatcacaaaaacaagt---ttttttgaatcttattgcattgttgttttgtggt 4783881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 6280937 - 6281096
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||||| || ||| |||||||||||||||||| |||||||||||||||  || |||| ||||||| ||| | |||||| |||||||| ||| |    
T  6280937 tgttataagaatataaaagatataggagtttccaaaacttcattgttacgttttttattctccttggtgcgattttaaacaatttgaagtcattccaaac 6281036  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||| ||   |||||||||| |||||||||||    
T  6281037 caatttcaatcacaaaaacaagtaagtttttttaatcatattgcattgttgttttgtggt 6281096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 21015838 - 21015977
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  21015838 cataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagccattccaagccaatttcaatcacaaaaaca 21015937  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  21015938 agtaagttttttgaatcctattgcattgttgctttgtggt 21015977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 34528244 - 34528403
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | ||  |||||||||||||||||||||||||||||  ||||||| || |||| | ||||| |||||||||||| ||| |||| |||||    
T  34528244 tgttataagaacataacggacataggagtttccaaaactccattgttgtgtttttgattatccttgctgcgattttgagcaatttgaagccattccaagc 34528343  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| || |||||||| ||||  ||||||||||| |||||||||||    
T  34528344 caatttcaatcacaaaaacaaataagttttctgaatcctattgcattgttgttttgtggt 34528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 34151693 - 34151853
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||| | |||| ||| || |||||||| ||||||||||||||| ||||||  || |||||| ||||| |||||||||||| |||||||| |||||    
T  34151693 tgttataagtacagaacagatatgggagtttctaaaactccattgttatgttttttattctcctagatgcgattttgagcaatttgaagtcattccaagc 34151792  T
Q  309 caatttcaatcacaaaaataagtaag-ttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||  ||||||| |||||||||  ||||||||||| |||||||||||    
T  34151793 caatttcaatcacaaaaccaagtaagtttttttgaatcctattgcattgttgttttgtggt 34151853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 28083964 - 28083825
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| || ||||| ||||||||||||||||||||||| |    
T  28083964 cataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaattcattccaagccaatttcaatcacaaaaaca 28083865  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  28083864 agtaagttttttgaatcctattgcattgttgctttgtggt 28083825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 368
Target Start/End: Original strand, 49422206 - 49422328
Alignment:
Q  246 ctccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaact 345  Q
    |||||||||| ||||||| | | |||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||      
T  49422206 ctccattgttgcgttttttgatctcctaggtgcgattttcagcaatttcaagccattccaagccaatttcaatcacaaaaacaagtaagttttttgaatc 49422305  T
Q  346 ctattgcattgctgttttgtggt 368  Q
    ||||||||||| |||||||||||    
T  49422306 ctattgcattgttgttttgtggt 49422328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 40352435 - 40352574
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| ||||||   || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  40352435 cataggagtttccaaaactccattgttgcgttttgaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 40352534  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||| |||||||||||  || ||||||||    
T  40352535 agtaagttttttgaattctattgcattattgctttgtggt 40352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 41793463 - 41793602
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  41793463 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 41793562  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  41793563 agtaagttttttgaatcctattgcattgttgctttgtggt 41793602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 51026132 - 51026290
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||| ||| |||| | ||||||||||||||||||||||||||||||||||| || ||||  |||||||  ||| |||||     ||||||| |||    
T  51026132 tctgttatatgaacagaaca-acataggagtttccaaaactccattgttacgttttcggatttctcaggtgcgtttttcagcaaacatcagtcattccaa 51026230  T
Q  307 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||| |||||||  ||||||||||||||||  ||||||||||||| |||||||    
T  51026231 gccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtg 51026290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 55799503 - 55799364
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  55799503 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 55799404  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||| ||| || ||||||||    
T  55799403 agtaagttttttgaatcctattgctttgttgctttgtggt 55799364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 36774809 - 36774946
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| |||| ||||| |||||||| |||||||  |    
T  36774809 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccattccaagcgaatttcaagcacaaaatca 36774908  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  36774909 agtaagttttttgaattctattgcattgctattttgtg 36774946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 207 - 343
Target Start/End: Original strand, 43887577 - 43887712
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    |||||||| |||    
T  43887577 tctgttatatgaacagaacag-cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagtcattccaa 43887675  T
Q  307 gccaatttcaatcacaaaaataagtaagttttttgaa 343  Q
    ||||||||||| |||||||  ||||||||||||||||    
T  43887676 gccaatttcaagcacaaaatcaagtaagttttttgaa 43887712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 6175976 - 6176090
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  6175976 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 6176075  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  6176076 agtaagttttttgaa 6176090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 49096292 - 49096178
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  49096292 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 49096193  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  49096192 agtaagttttttgaa 49096178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 44558918 - 44558977
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  44558918 aattttgattatataggttttattgattttatgatatgttaggatagtttaggttagaat 44558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 4909896 - 4910028
Alignment:
Q  204 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 303  Q
    |||||||||||||||| |||| || ||||| |||||||||||| |||||||| ||||||| |  ||| ||||||||| ||| | |||    ||||||||     
T  4909896 tgatctgttataagaacagaacaggcatagaagtttccaaaacaccattgttgcgttttttgaattcttaggtgcgattttcaccaagcataagtcattc 4909995  T
Q  304 caagccaatttcaatcacaaaaataagtaagtt 336  Q
    ||||| |||||||| |||||||  |||||||||    
T  4909996 caagctaatttcaagcacaaaatcaagtaagtt 4910028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 9491071 - 9491015
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  9491071 ttcgattatatagattttattgattttatgatatgttaggatattttaggttagaat 9491015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 21410205 - 21410265
Alignment:
Q  203 ttgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgttttt 263  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||| |||||||    
T  21410205 ttgatctgttataagaacaaaacagacataggagtttccaaaactccattgttgcgttttt 21410265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 365
Target Start/End: Complemental strand, 37959713 - 37959568
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 309  Q
    |||||||||| | ||||||||| ||||||||||||||||||||||| || ||||  || || ||||||||| |||  ||          |||| ||||||    
T  37959713 gttataagaacataatagacatgggagtttccaaaactccattgttgcggttttcattctcttaggtgcgattttctgc----------cattccaagcc 37959624  T
Q  310 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgt 365  Q
    ||||||||||||||||| ||||||||||||||||  || |||||||| ||| ||||    
T  37959623 aatttcaatcacaaaaacaagtaagttttttgaatcctgttgcattgttgtattgt 37959568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 448
Target Start/End: Original strand, 34151873 - 34151932
Alignment:
Q  389 gttgaatttcgattatataggttttattgattttataatatgttaggataatttaggtta 448  Q
    ||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  34151873 gttaaatttcaattatataggttttattgattttatgatatgttaggatagtttatgtta 34151932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 22438493 - 22438379
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||| ||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||  ||| ||||||||| |||||||  |    
T  22438493 catagaagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccattcaaagacaatttcaagcacaaaatca 22438394  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  22438393 agtaagttttttgaa 22438379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 326
Target Start/End: Complemental strand, 47313049 - 47312927
Alignment:
Q  204 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 303  Q
    |||||||||||||||| | || || |||  || ||||||||||||||||||| || |||||| || | ||||||||| |||   |||  | ||||||||     
T  47313049 tgatctgttataagaacaaaacaggcatgagaatttccaaaactccattgttgcggttttgggttccataggtgcgattttttacaaggttaagtcattc 47312950  T
Q  304 caagccaatttcaatcacaaaaa 326  Q
    |||||||||||||| ||||||||    
T  47312949 caagccaatttcaaacacaaaaa 47312927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 9719048 - 9718977
Alignment:
Q  295 aagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||||||||||||| || ||||  ||||||||||||||||   |||| ||||| |||||||||    
T  9719048 aagtcatttcaagccaatttcaagcataaaatcaagtaagttttttgaatcttatttcattgttgttttgtg 9718977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 21171307 - 21171257
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacg 258  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  21171307 tctgttatatgaatagaata-atataggagtttccaaaactccattgttacg 21171257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 453
Target Start/End: Original strand, 241785 - 241834
Alignment:
Q  404 tataggttttattgattttataatatgttaggataatttaggttagaata 453  Q
    |||| |||||||||||||||| ||||||||||||| |||| |||||||||    
T  241785 tataagttttattgattttatgatatgttaggatagtttatgttagaata 241834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 55799304 - 55799267
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| |||||||||||||||||||||||||||    
T  55799304 ttgattttatgatatgttaggataatttaggttagaat 55799267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 24076857 - 24076809
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgtt 255  Q
    ||||||||||||| | || |||||||||| |||||||||||||||||||    
T  24076857 tctgttataagaacataacagacataggaatttccaaaactccattgtt 24076809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 34528426 - 34528494
Alignment:
Q  389 gttgaatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaat 452  Q
    ||| |||||||||||||||||||      |||||||||||| ||||||||||||| |||||||||||||    
T  34528426 gttaaatttcgattatataggttcgattatattgattttatgatatgttaggatagtttaggttagaat 34528494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 424
Target Start/End: Complemental strand, 49572705 - 49572674
Alignment:
Q  393 aatttcgattatataggttttattgattttat 424  Q
    ||||||||||||||||||||||||||||||||    
T  49572705 aatttcgattatataggttttattgattttat 49572674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 366
Target Start/End: Complemental strand, 2774861 - 2774736
Alignment:
Q  242 aaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagtt-tttt 340  Q
    ||||||| | |||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||||||||||||| |||||||  ||||||||| ||||    
T  2774861 aaaactctactgttacgttttttgcttccataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaatcaagtaagttttttt 2774762  T
Q  341 gaactctattgcattgctgttttgtg 366  Q
    |||  ||||||| ||||| |||||||    
T  2774761 gaatcctattgcgttgctattttgtg 2774736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 6176175 - 6176212
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  6176175 ttgattttatgatatgttaggatagtttaggttagaat 6176212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 21016037 - 21016074
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  21016037 ttgattttatgatatgttaggatagtttaggttagaat 21016074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 41793662 - 41793699
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  41793662 ttgattttatgatatgttaggatagtttaggttagaat 41793699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 49096093 - 49096056
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  49096093 ttgattttatgatatgttaggatagtttaggttagaat 49096056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 335
Target Start/End: Original strand, 8866830 - 8866958
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||||||| | || | |||||||| | ||||||||||||||||| || |||||  || | ||||||||| |||   |||  | |||||||| |||    
T  8866830 tctgttataagaacaaaacaaacataggaatgtccaaaactccattgttgcggttttgagttccataggtgcgattttctccaagcttaagtcattccaa 8866929  T
Q  307 gccaatttcaatcacaaaaataagtaagt 335  Q
     |||||| ||| |||||||  ||||||||    
T  8866930 accaattacaaacacaaaatcaagtaagt 8866958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 37959496 - 37959460
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  37959496 tgattttatgatatgttaggatagtttaggttagaat 37959460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 39590361 - 39590306
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||| | |||||| |||||||| ||||||||||||| | |||||||||||    
T  39590361 ttcgattatattgattttat-gattttatgatatgttaggatagtataggttagaat 39590306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 25499881 - 25499721
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| | | |||||||||||| ||||||||||||||||||||| |||||    
T  25499881 tgttataagaacagaacagacataggagtttccaaaactccattgttacattttttgatctcctaggtgcgattttgagcaatttcaagtcattacaagc 25499782  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||    
T  25499781 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggtt 25499721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 209 - 452
Target Start/End: Original strand, 34682336 - 34682578
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||| | |||  ||||||| ||||||||||||||||||||||||||||||  || |||||||||||| |||||||||||| |||||||| ||||     
T  34682336 tgttataagtacagaccagacatatgagtttccaaaactccattgttacgttttttattctcctaggtgcgattttgagcaatttgaagtcattccaagt 34682435  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatatag 408  Q
     |||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||  ||                ||| ||||||||||||||||    
T  34682436 taatttcaatcacaagaacaagtaagttttttgaattctattgcattgttgttttgtggtcgaa-ttgttttttttttttgttaaatttcgattatatag 34682534  T
Q  409 gttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  34682535 gttttattgattttatgatatgttaggatagtttaggttagaat 34682578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 541006 - 541162
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||  || ||||   ||| | |||||||||||| |||||||| |||||    
T  541006 tgttataagaacagaacagacataggagtttccaaaactcccttgttgcgttttttattctcct---tgctattttgagcaatttgaagtcattccaagc 541102  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  541103 caatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtggt 541162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 5894 - 6034
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| ||| |||| |||||||||||||||||||||||     
T  5894 acataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagccattccaagccaatttcaatcacaaaaac 5993  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  5994 aagtaagttttttgaatcctattgcattgttgctttgtggt 6034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 209 - 369
Target Start/End: Original strand, 41798898 - 41799059
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || | |||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| |||||||| |||| |||||    
T  41798898 tgttataagaacataacaaacataggagtttccaaaactccattgttacgttttttgatctccaatgtgcgattttgagctatttcaagacattccaagc 41798997  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactc-tattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| |||||||||||||  | || |||||||||| ||||||| ||||    
T  41798998 caatttcaatcacaaaaacaagtaagttttttttaatcttattgcattgttgttttgcggtt 41799059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 238 - 369
Target Start/End: Original strand, 35926466 - 35926597
Alignment:
Q  238 ttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttt 337  Q
    |||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||| ||||   |||||||||||||| | || |||||||    
T  35926466 ttccaaaactccattgttacgttttttgttctcctaggtgcgattttgagcaatttcaagccattccaagaacatttcaatcacaaagaaaaataagttt 35926565  T
Q  338 tttgaactctattgcattgctgttttgtggtt 369  Q
    ||||||  ||||||||||||||||||| ||||    
T  35926566 tttgaatcctattgcattgctgttttggggtt 35926597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 211 - 368
Target Start/End: Original strand, 41201809 - 41201966
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 310  Q
    ||||||||| | || |||||||| || || |||||||  |||||||||||||| |   ||||| || ||| |||||||||||||||| ||||| ||||||    
T  41201809 ttataagaacataacagacatagaagatttcaaaactttattgttacgttttttgagctcctacgtacgattttgagcaatttcaagccattttaagcca 41201908  T
Q  311 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||    
T  41201909 atttcaatcacaaaaataagtaagttttttaaatcctattgcattgttgttttgtggt 41201966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 8574801 - 8574959
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||| ||||||   || ||| |||||||| ||||||  |||| ||| |||| |||||    
T  8574801 tgttataagaatagaactg-cataggagtttccaaaactccattgttgcgttttgaattatccaaggtgcgattttgagtcatttgaagccattacaagc 8574899  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| || ||||||||    
T  8574900 caatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgctttgtggt 8574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 11348494 - 11348336
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| |||  ||| |||||    
T  11348494 tgttataagaacagaacag-cataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagctattccaagc 11348396  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| |||||||| |||| ||  ||||||||||| || ||||||||    
T  11348395 caatttcaatcacaaaaacaagtaagtgtttttaatcctattgcattgttgctttgtggt 11348336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 19035337 - 19035476
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  19035337 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 19035436  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  19035437 agtaagttttttgaatcctattgcattgttgctttgtggt 19035476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 27660039 - 27660153
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  27660039 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 27660138  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  27660139 agtaagttttttgaa 27660153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 368
Target Start/End: Complemental strand, 11028979 - 11028839
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| ||||||||  | ||  || ||||| || ||   |||| |||||||| |||||||||||||||||||||||     
T  11028979 acataggagtttccaaaactccattgttgcgtttttgagtatcaaagttgcgatttcgaatcattttaagtcattacaagccaatttcaatcacaaaaac 11028880  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  11028879 aagtaagttttttgaatcctattgcattgttgctttgtggt 11028839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 368
Target Start/End: Complemental strand, 38855686 - 38855546
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| ||||||||  | ||  || ||||| |||||   |||| ||| |||| |||||||||||||||||||||||     
T  38855686 acataggagtttccaaaactccattgttgcgtttttgagtatcaaagttgcgattttgaatcatttgaagccattacaagccaatttcaatcacaaaaac 38855587  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  38855586 aagtaagttttttgaatcctattgcattgttgctttgtggt 38855546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 210 - 452
Target Start/End: Complemental strand, 18310040 - 18309809
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 309  Q
    |||||||||| | || |||||||||||||||||||||||||||||| |  ||||  || || ||||||||| |||  ||          |||| ||||||    
T  18310040 gttataagaacataacagacataggagtttccaaaactccattgttgcagttttcattctcttaggtgcgattttctgc----------cattccaagcc 18309951  T
Q  310 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatatagg 409  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||  ||                ||| |||||||||||||||||    
T  18309950 aatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggtcgaattgtttgtttttttt-gttaaatttcgattatatagg 18309852  T
Q  410 ttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  18309851 ttttattgattttatgatatgttaggatagtttaggttagaat 18309809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 8539516 - 8539381
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| | |||||| ||||||  |||| |||||||| ||| |||||| |||||||||||| |    
T  8539516 cataggagtttccaaaactccattgttgcgtttttt-ttatccaatgtgcgattttgagtcatttgaagtcattccaaaccaattccaatcacaaaaaca 8539418  T
Q  329 agtaagttttttgaactctattgcattgctgttttgt 365  Q
    |||||||||||||||  ||||||||||| || |||||    
T  8539417 agtaagttttttgaatcctattgcattgttgctttgt 8539381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 30887371 - 30887256
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| |||||||| |||| |||||    
T  30887371 tgttataagaacataacagacataggagtttccaaaactccattgttacgttttttgatctccaatgtgcgattttgagctatttcaagccattccaagc 30887272  T
Q  309 caa-tttcaatcacaa 323  Q
    ||| ||||||||||||    
T  30887271 caattttcaatcacaa 30887256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 36348708 - 36348866
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| | || | ||| || |||||| |  ||    || ||||| |||    
T  36348708 tctgttatatgaacagaacag-cataggagtttccaaaactccattgttacgttttttgcttccatagatgtgaatttcacaaagcataaatcattccaa 36348806  T
Q  307 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||| |||||||  |||||||||||||||| |||||||||||||| |||||||    
T  36348807 gccaatttcaagcacaaaatcaagtaagttttttgaattctattgcattgctattttgtg 36348866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 7483857 - 7483994
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||||||||||||||||| |||||||  |    
T  7483857 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccatttcaagccaatttcaagcacaaaatca 7483956  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||| ||  ||||||| ||||| |||||||    
T  7483957 agtaagtttttttaatcctattgcgttgctattttgtg 7483994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 211 - 337
Target Start/End: Original strand, 1398685 - 1398811
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 310  Q
    ||||||||| ||||  ||||||||||||| ||||||||||||||||  ||||| | | |||||||||||| ||||||||||||||||  |||  ||| ||    
T  1398685 ttataagaacagaactgacataggagttttcaaaactccattgttatattttttgatctcctaggtgcgattttgagcaatttcaagcaattctaagtca 1398784  T
Q  311 atttcaatcacaaaaataagtaagttt 337  Q
    |||||||| | ||||| ||| ||||||    
T  1398785 atttcaataaaaaaaacaagcaagttt 1398811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 1696598 - 1696461
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||| ||||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||| ||||||||| |||||||  |    
T  1696598 cataggagtttccaaaactcctttgttacgttttttgcttccataggtgcgaatttcacgaagaataagccattccaagtcaatttcaagcacaaaatca 1696499  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    | |||||||||||||  ||||||||||||| |||||||    
T  1696498 attaagttttttgaatcctattgcattgctattttgtg 1696461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 41088233 - 41088370
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    |||||||||| |||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||  ||||||||||||| |||||||  |    
T  41088233 cataggagttaccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccattctaagccaatttcaagcacaaaatca 41088332  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||  ||||||| ||||| |||||||    
T  41088333 agtaagttttttgaatcctattgcgttgctattttgtg 41088370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 25499686 - 25499631
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggtta 448  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  25499686 aatttcgattatataggttttattgattttatgatatgttaggatagtttaggtta 25499631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 30711133 - 30710995
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||   || ||||||   || ||| |||||||| ||||||  |||| ||| |||| ||||||||||| ||| ||||||| |    
T  30711133 cataggagtttccaaaactccaagtttgcgttttaa-ttatccaaggtgcgattttgagtcatttgaagccattacaagccaattttaataacaaaaaca 30711035  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||| ||||||| |||| || ||||||||    
T  30711034 agtaagttttttgaattctattgtattgttgctttgtggt 30710995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 371
Target Start/End: Original strand, 6791814 - 6791963
Alignment:
Q  228 acataggagtttccaaaactccattgtta------cgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcac 321  Q
    |||||||||||||||||| ||||||||||      ||||||| | |||| ||||||||||||| |  ||    ||||||||  ||||||||||||| |||    
T  6791814 acataggagtttccaaaattccattgttattgttacgttttttgctttcataggtgcgaatttcataaagcataagtcattctaagccaatttcaagcac 6791913  T
Q  322 aaaaataagtaagttttttgaactctattgcattgctgttttgtggttaa 371  Q
    ||||  ||||||||||||||||  ||||||||||||| ||||||| ||||    
T  6791914 aaaatcaagtaagttttttgaatcctattgcattgctattttgtgattaa 6791963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 231 - 366
Target Start/End: Complemental strand, 1973230 - 1973095
Alignment:
Q  231 taggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataag 330  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||  ||| |||||      | |||| ||||| |||||||| |||||||  |||    
T  1973230 taggagtttccaaaactccattgttacgtttttggatttctcaggtgcgtttttcagcaaacatcggccattccaagctaatttcaagcacaaaatcaag 1973131  T
Q  331 taagttttttgaactctattgcattgctgttttgtg 366  Q
    ||| |||||||||  |||| |||||||| |||||||    
T  1973130 taaattttttgaatcctatggcattgctattttgtg 1973095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 211 - 368
Target Start/End: Complemental strand, 3603140 - 3602994
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 310  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| || ||||  || || ||||||||| |||  ||          |||| |||||||    
T  3603140 ttataagaacagaacagacataggagtttccaaaactccattgttgcggttttcattctcttaggtgcgattttctgc----------cattccaagcca 3603051  T
Q  311 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||| ||||||||| ||||||   ||||||| || |||||||||||    
T  3603050 atttcaatcacaaaaacaagtaagttctttgaatcatattgca-tgttgttttgtggt 3602994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 23190841 - 23190679
Alignment:
Q  204 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 303  Q
    |||||||||||||||| |||| ||||||| || ||||||||||||||||||| |  |||||  || | ||||||| | |||   |||  | ||| ||||     
T  23190841 tgatctgttataagaacagaacagacatacgaatttccaaaactccattgttgcagttttgagttccgtaggtgcaatttttgacaaggttaagccattc 23190742  T
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||| ||||||| |||||||||| ||   |  ||||||||||| |||||||||    
T  23190741 caagccaatttcaagcacaaaattaagtaagttgttatcatcctattgcattgttgttttgtg 23190679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 20200065 - 20199996
Alignment:
Q  297 gtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||   |||||||||| |||||||||    
T  20200065 gtcattccaagccaatttcaatcacaaaaacaagtaaattttttgaatcttattgcattgttgttttgtg 20199996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 40937221 - 40937159
Alignment:
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||| |||||||  ||||||||||||||||  ||||||||||||| |||||||    
T  40937221 caagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtg 40937159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 7401864 - 7401807
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttg 264  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||| || |||||    
T  7401864 tctgttataagaacagaacagacataggaatttccaaaactccattgttgcggttttg 7401807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 41201996 - 41202054
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||| |||||||||| |||||| |||||||| ||||||||||||| |||||||||||||    
T  41201996 aattttgattatatagattttat-gattttatgatatgttaggatagtttaggttagaat 41202054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 35567021 - 35566967
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgttttt 263  Q
    ||||||||||| | || |||||||| ||||||||||||||||||||| |||||||    
T  35567021 tgttataagaacaaaacagacatagaagtttccaaaactccattgttgcgttttt 35566967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 541205 - 541260
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||| | |||||| |||||||| ||||||||||||| |||||||||||||    
T  541205 ttcgattatattgattttat-gattttatgatatgttaggatagtttaggttagaat 541260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 1398913 - 1398968
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||||||||||||||||||||| |||| ||| |||| |||| ||||||||    
T  1398913 ttcgattatataggttttattgattttatgatat-ttatgatagtttatgttagaat 1398968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 30710970 - 30710912
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||| | |||  |||||||||| ||||||||||||| |||||||||||||    
T  30710970 aatttcgattatattgatttg-ttgattttatgatatgttaggatagtttaggttagaat 30710912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 31239766 - 31239720
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgtt 255  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||    
T  31239766 tgttataagaacataacagacataggaatttccaaaactccattgtt 31239720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 40937283 - 40937253
Alignment:
Q  233 ggagtttccaaaactccattgttacgttttt 263  Q
    |||||||||||||||||||||||||||||||    
T  40937283 ggagtttccaaaactccattgttacgttttt 40937253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 6094 - 6131
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  6094 ttgattttatgatatgttaggatagtttaggttagaat 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 8539318 - 8539281
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  8539318 ttgattttatgatatgttagaataatttaggttagaat 8539281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 8575019 - 8575056
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  8575019 ttgattttatgatatgttaggatagtttaggttagaat 8575056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 19035536 - 19035573
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  19035536 ttgattttatgatatgttaggatagtttaggttagaat 19035573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 27660238 - 27660275
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  27660238 ttgattttatgatatgttaggatagtttaggttagaat 27660275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 30887209 - 30887172
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  30887209 ttgattttatgatatgttaggatagtttaggttagaat 30887172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 3602923 - 3602887
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  3602923 tgattttattatatgttaggatagtttaggttagaat 3602887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 41799128 - 41799164
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  41799128 tgattttatgatatgttaggatagtttaggttagaat 41799164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 55267495 - 55267654
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||||| || | |||||||||||||||||||||||||||| |||||||| || |||| ||||||| |||||||||||| |||||||| |||||    
T  55267495 tgttataagaatataacaaacataggagtttccaaaactccattgttgcgtttttgattctccttggtgcgattttgagcaatttgaagtcattccaagc 55267594  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  55267595 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 55267654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 206 - 368
Target Start/End: Original strand, 34645638 - 34645798
Alignment:
Q  206 atctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttca 305  Q
    |||||||||||||| | || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| || ||||||||||||| |||| ||    
T  34645638 atctgttataagaacataacagacataggagtttccaaa-ctccattgttacgtttttggttctcctaggtgcgatttggagcaatttcaagccattcca 34645736  T
Q  306 agccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||| |||||||||| ||||||||||||||||  ||| || |||| |||||||||||    
T  34645737 agccaatttcgatcacaaaaacaagtaagttttttgaatccta-tgtattgttgttttgtggt 34645798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 43478823 - 43478662
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||| ||||||| |||||||| |||| |||||    
T  43478823 tgttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagccattccaagc 43478724  T
Q  309 caatttcaatcacaaaaataagtaagtt-ttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||| |||| ||  ||||||||||| ||||||| ||||    
T  43478723 caatttcaatcacaaaaacaagtaagttttttttaatcctattgcattgttgttttgcggtt 43478662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 2267136 - 2267294
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| |||||||| |||||    
T  2267136 tgttataagaacagaacag-cataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagtcattccaagc 2267234  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| || ||||||||    
T  2267235 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgctttgtggt 2267294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 209 - 372
Target Start/End: Original strand, 13894306 - 13894469
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| | | ||  |||||||| ||||||| ||||||||||||| |||||    
T  13894306 tgttataagaacagaacagacataggagtttccaaaactccattgttatgttttttgatctcgaaggtgcgattttgagctatttcaagtcattccaagc 13894405  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa 372  Q
    ||||||||||||| |||| ||||| ||||||| ||  ||||||||||| ||||||| |||||||    
T  13894406 caatttcaatcaccaaaacaagtaggtttttttaatcctattgcattgttgttttgcggttaaa 13894469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 34691705 - 34691864
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||| || |||| | ||||| |||||||||||| |||||||| |||||    
T  34691705 tgttataagaacagaacagacatatgagtttccaaaactccattgttgcgtttttgattctccttgctgcgattttgagcaatttgaagtcattccaagc 34691804  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
     ||||||||||||||||| |||||||| || ||||  ||||||||||| |||||||||||    
T  34691805 taatttcaatcacaaaaacaagtaagtattctgaatcctattgcattgttgttttgtggt 34691864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 226 - 368
Target Start/End: Original strand, 55205364 - 55205506
Alignment:
Q  226 agacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaa 325  Q
    ||||||||||||||||| |||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| ||||||||||| ||||||||||    
T  55205364 agacataggagtttccataactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaagccaattttaatcacaaaa 55205463  T
Q  326 ataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    | ||||||||||||||||  ||||||||||| |||||||||||    
T  55205464 acaagtaagttttttgaatcctattgcattgttgttttgtggt 55205506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 209 - 369
Target Start/End: Original strand, 45098884 - 45099044
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || | | |||||||||||||||||||||||||||||||||| | | ||||| |||||| ||| |||||||||||| |||| ||||     
T  45098884 tgttataagaacaaaaaaaatataggagtttccaaaactccattgttacgttttttgatctcctatgtgcgattttcagcaatttcaagccattccaagt 45098983  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||| ||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||    
T  45098984 caattttaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggtt 45099044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 368
Target Start/End: Complemental strand, 50998629 - 50998489
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| |||||||| |||||||||||||||||||||||     
T  50998629 acataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatcacaaaaac 50998530  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  50998529 aagtaagttttttgaatcctattgcattgttgctttgtggt 50998489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 209 - 363
Target Start/End: Complemental strand, 16484449 - 16484294
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| | | ||| |||||||| ||||||| ||||||||||||| |||||    
T  16484449 tgttataagaacagaacagacataggagtttcaaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagtcattccaagc 16484350  T
Q  309 caatttcaatcacaaaaataag-taagttttttgaactctattgcattgctgtttt 363  Q
    |||||||||| ||||||| ||| |||||||||| ||  ||||||||||| ||||||    
T  16484349 caatttcaataacaaaaacaagttaagtttttttaatcctattgcattgttgtttt 16484294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 24700801 - 24700960
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || | ||||| |||||||||||||||||||||| |||||||  || ||| |||||||| ||||||||||||||||||||| |||||    
T  24700801 tgttataagaacataacacacatatgagtttccaaaactccattgttgcgttttttcttctccaaggtgcgattttgagcaatttcaagtcattccaagc 24700900  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||| |||||||| ||||| ||||||||||||||||   |||||||||| |||||||||||    
T  24700901 caaattcaatcaaaaaaacaagtaagttttttgaatcttattgcattgttgttttgtggt 24700960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 211 - 372
Target Start/End: Original strand, 51693960 - 51694121
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 310  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| |||||   | ||| |||||||| ||||||| ||||||||||||| |||| ||    
T  51693960 ttataagaatagaacagacataggagttttcaaaactccattgttacattttttaatctccaaggtgcgattttgagctatttcaagtcattccaagtca 51694059  T
Q  311 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa 372  Q
    |||||||||||||||| ||||||||||||  ||   |||||||||| ||||||| |||||||    
T  51694060 atttcaatcacaaaaacaagtaagtttttctaatcttattgcattgttgttttgcggttaaa 51694121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 228 - 369
Target Start/End: Original strand, 52567857 - 52567998
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| |||||||  || |||| ||||||| | |||||||||| |||||||| |||| ||||||||||||||||||     
T  52567857 acataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattgtgagcaatttgaagtcattccaagtcaatttcaatcacaaaaac 52567956  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    ||||||||||||||||   |||||||||| ||||||||||||    
T  52567957 aagtaagttttttgaatcatattgcattgttgttttgtggtt 52567998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 221 - 452
Target Start/End: Complemental strand, 43571667 - 43571433
Alignment:
Q  221 agaatagacataggagtttccaaaactccattgttacgtttttggttttc--ctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaat 318  Q
    |||| |||||||||||||| |||||||||||||||||||||||  | |||  |||||||||| |||||||||||| ||| |||| |||| ||||||||||    
T  43571667 agaacagacataggagttttcaaaactccattgttacgttttttttattctcctaggtgcgattttgagcaatttgaagccattccaagtcaatttcaat 43571568  T
Q  319 cacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt-taaannnnnnnnnnnnnnnngttgaatttcgattatataggttttattg 417  Q
    |||| ||| ||||||||||||||||  ||||||||||| |||||||||||  ||                 ||| |||||| ||||||||||||||||||    
T  43571567 cacagaaacaagtaagttttttgaatcctattgcattgttgttttgtggtcgaattgtttgttttttttttgttaaatttcaattatataggttttattg 43571468  T
Q  418 attttataatatgttaggataatttaggttagaat 452  Q
    ||||||| || |||||||||| |||||||||||||    
T  43571467 attttatgatgtgttaggatagtttaggttagaat 43571433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 44490425 - 44490584
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    |||||||||||  ||||||| |||| ||||||||||||| |||||||||||||||   | ||| | ||| || |||||||||||||||| |||| |||||    
T  44490425 tgttataagaacggaatagatatagcagtttccaaaacttcattgttacgtttttttatctccaatgtgtgattttgagcaatttcaagacattccaagc 44490524  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||    
T  44490525 caatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtggt 44490584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 221 - 364
Target Start/End: Original strand, 49217182 - 49217325
Alignment:
Q  221 agaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatca 320  Q
    |||| |||||||||||||||||||||||||||||||||||||| | | | | |||||| | ||||||| ||||||||||||| ||| |||||||||||||    
T  49217182 agaacagacataggagtttccaaaactccattgttacgttttttgatcttcaaggtgcaattttgagctatttcaagtcattccaaaccaatttcaatca 49217281  T
Q  321 caaaaataagtaagttttttgaactctattgcattgctgttttg 364  Q
    |||||| ||||||||||||| ||  ||||||||||| |||||||    
T  49217282 caaaaacaagtaagtttttttaatcctattgcattgttgttttg 49217325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 209 - 367
Target Start/End: Complemental strand, 41805668 - 41805510
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||| ||||||| ||||||||||||||  ||||||  || |||| ||||||| |||||||||||| |||||||| |||      
T  41805668 tgttataagaacagaacagacataagagtttctaaaactccattgttgtgttttttattctccttggtgcgattttgagcaatttgaagtcattccaaat 41805569  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtgg 367  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||||||    
T  41805568 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgtgg 41805510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 222 - 452
Target Start/End: Original strand, 44223114 - 44223343
Alignment:
Q  222 gaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcac 321  Q
    ||||||| || |||||||||||||||| |||||||| |||||| | | |||| |||| | |||||| |||||||||||||||||| ||||||||||||||    
T  44223114 gaatagatatgggagtttccaaaactctattgttacatttttgatct-cctacgtgcaattttgagtaatttcaagtcatttcaaaccaatttcaatcac 44223212  T
Q  322 aaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatataggttttattgattt 421  Q
    ||||| ||||||||||||| ||   ||| |||||| ||||||||||| |||                ||| |||||  ||||||||||||||||||||||    
T  44223213 aaaaacaagtaagtttttttaatcttatcgcattgttgttttgtggtcaaattgtttaactttttttgttaaattttaattatataggttttattgattt 44223312  T
Q  422 tataatatgttaggataatttaggttagaat 452  Q
    ||| ||||||||||||| |||||||||||||    
T  44223313 tatgatatgttaggatagtttaggttagaat 44223343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 4002794 - 4002951
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||| |||||||| || ||| |||||||| ||||||  |||| |||| ||| |||||    
T  4002794 tgttataagaacagaacag-cataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagttattccaagc 4002892  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||| ||||||||||| |||||||||||| |||  ||||||||||| |||||||||||    
T  4002893 caattt-aatcacaaaaacaagtaagtttttagaatcctattgcattgttgttttgtggt 4002951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 228 - 368
Target Start/End: Complemental strand, 36136572 - 36136433
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    ||||||||||||||||||||| |||||| ||||| |  || ||| |||||||| ||||||  |||| |||||||| |||||||||||||||||||||||     
T  36136572 acataggagtttccaaaactctattgttgcgtttata-ttatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatcacaaaaac 36136474  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  36136473 aagtaagttttttgaatcctattgcattgttgctttgtggt 36136433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 2645555 - 2645694
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||| | ||||||  |||| |||||||| ||||||||||| ||||||||||| |    
T  2645555 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcaattttgagtcatttgaagtcattacaagccaattttaatcacaaaaaca 2645654  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  |||||| |||| || ||||||||    
T  2645655 agtaagttttttgaatcctattgtattgttgctttgtggt 2645694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 356
Target Start/End: Original strand, 19440336 - 19440483
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||  || |||| ||| ||| ||| | |||||| |||| ||||||||     
T  19440336 tgttataagaacagaacagacataagagtttccaaaactccattgttgcgttttttattctccttggtacgattttaaacaatttgaagtaatttcaagt 19440435  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattg 356  Q
    |||||||||||||||||| |||||| |||| ||||  |||||||||||    
T  19440436 caatttcaatcacaaaaacaagtaacttttgtgaatcctattgcattg 19440483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 204 - 363
Target Start/End: Original strand, 20374296 - 20374445
Alignment:
Q  204 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 303  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||  || || ||||||||| ||| |||          ||||     
T  20374296 tgatctgttataagaacagaacagacataggagtttccaaaactccattgttgcgtttttcattctcttaggtgcgattttcagc----------cattc 20374385  T
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtttt 363  Q
    |||||||||||||| |||||||  ||||||||||||||||  ||||||||||| ||||||    
T  20374386 caagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgttgtttt 20374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 2950465 - 2950579
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  2950465 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 2950564  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  2950565 agtaagttttttgaa 2950579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 46406565 - 46406451
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  46406565 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 46406466  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  46406465 agtaagttttttgaa 46406451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 42321806 - 42321964
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||||||    
T  42321806 tctgttatatgaacagaacag-cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccatttcaa 42321904  T
Q  307 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||| || || ||||  ||||||||||||||||  ||||||||||| | |||||||    
T  42321905 gccaatttaaagcaaaaaatcaagtaagttttttgaatcctattgcattgttattttgtg 42321964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 49138713 - 49138827
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  49138713 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 49138812  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  49138813 agtaagttttttgaa 49138827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 366
Target Start/End: Complemental strand, 51017158 - 51017020
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    |||||||| ||| |||||||| | |||||||      
T  51017158 acataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagtcattccaaaccaatttctagcacaaaatc 51017059  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||||||  ||||||||||| | |||||||    
T  51017058 aagtaagttttttgaatcctattgcattgatattttgtg 51017020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 50457574 - 50457735
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcg---aatttgagcaatttcaagtcattt 303  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||| ||||  |||||||     ||| |||||     |||||||     
T  50457574 tctgttatatgaacagaacag-cataggagtttccaaaactccattgttacgtttttggatttctcaggtgcgtttttttttagcaaacgtcagtcattc 50457672  T
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||| |||||||  ||||||||||||||||  ||||||||| ||| |||||||    
T  50457673 caagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcatcgctattttgtg 50457735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 54392002 - 54391882
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  54392002 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 54391903  T
Q  329 agtaagttttttgaactctat 349  Q
    |||||| |||||||| |||||    
T  54391902 agtaagctttttgaattctat 54391882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 18442121 - 18441959
Alignment:
Q  204 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 303  Q
    |||||||||||||||| | || | ||||||||||||| |||||| ||||||| |||||||| | ||||||||||||| ||| | ||   | ||||||||     
T  18442121 tgatctgttataagaacataacaaacataggagtttctaaaactgcattgttgcgtttttgatattcctaggtgcgattttcaccaggctaaagtcattc 18442022  T
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||  || |||| ||  |||||||| |||||||   |||||||||| |||||||||    
T  18442021 caagccaattctaagcacataatcaagtaagtgttttgaatcatattgcattgttgttttgtg 18441959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 19487195 - 19487033
Alignment:
Q  204 tgatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcattt 303  Q
    |||||||||||||||| | || | ||||||||||||| |||||| ||||||| |||||||| | ||||||||||||| ||| | ||   | ||||||||     
T  19487195 tgatctgttataagaacataacaaacataggagtttctaaaactgcattgttgcgtttttgatattcctaggtgcgattttcaccaggctaaagtcattc 19487096  T
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||  || |||| ||  |||||||| |||||||   |||||||||| |||||||||    
T  19487095 caagccaattctaagcacataatcaagtaagtgttttgaatcatattgcattgttgttttgtg 19487033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 34051287 - 34051173
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||| ||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  34051287 cataggagtttccaaaacttcattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 34051188  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  34051187 agtaagttttttgaa 34051173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 44929336 - 44929199
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||||| ||||| | || | ||||||||||||| |  ||    |||||||| |||| ||||||||| |||||||  |    
T  44929336 cataggagtttccaaaactccattgttacattttttgcttccataggtgcgaatttcacaaagcataagtcattccaagtcaatttcaagcacaaaatca 44929237  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||  ||||||  ||||| |||||||    
T  44929236 agtaagttttttgaatcctattgtgttgctattttgtg 44929199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 3493728 - 3493823
Alignment:
Q  273 aggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||| ||||||  |||| ||| ||||  |||||||||||||||||||||| ||||||||||||||||  ||||||||||| || ||||||||    
T  3493728 aggtgcgattttgagtcatttgaagccattagaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgctttgtggt 3493823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 3497422 - 3497517
Alignment:
Q  273 aggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||| ||||||  |||| ||| ||||  |||||||||||||||||||||| ||||||||||||||||  ||||||||||| || ||||||||    
T  3497422 aggtgcgattttgagtcatttgaagccattagaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgctttgtggt 3497517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 368
Target Start/End: Complemental strand, 7247853 - 7247705
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 309  Q
    |||||||||| | || |||||||| ||||||||||||||||||||| || ||||  || || ||||||||          ||||   |||||| |||| |    
T  7247853 gttataagaacataacagacatagtagtttccaaaactccattgttgcggtttttattctcttaggtgcg----------attttctgtcattccaagtc 7247764  T
Q  310 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  7247763 aatttcaatcaaaaaaataagtaagttttttgaatcctattgcattgttgttttgtggt 7247705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 364
Target Start/End: Complemental strand, 49275239 - 49275125
Alignment:
Q  250 attgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctat 349  Q
    |||||||||||||| | || | ||||||||||||| |  ||    ||||||||||||||||||||||| ||||||| |||||||||||||| ||  ||||    
T  49275239 attgttacgttttttgcttccataggtgcgaatttcacaaagcataagtcatttcaagccaatttcaagcacaaaattaagtaagtttttttaatcctat 49275140  T
Q  350 tgcattgctgttttg 364  Q
    ||||||||| |||||    
T  49275139 tgcattgctattttg 49275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 368
Target Start/End: Complemental strand, 2430176 - 2430112
Alignment:
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||| ||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  2430176 caagctaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 2430112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 43478616 - 43478560
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  43478616 ttcgattatatagattttattgattttatgatatgttaggatagtttaggttagaat 43478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 235 - 366
Target Start/End: Original strand, 27096093 - 27096224
Alignment:
Q  235 agtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaag 334  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||| ||| | |||  | ||| |||| ||||||||||  ||  | ||||  |||||||    
T  27096093 agtttccaaaactccattgttgcgtttttgatattcctaggtgcgattttcaccaagcttaagccattccaagccaattctaaggaaaaaatcaagtaag 27096192  T
Q  335 ttttttgaactctattgcattgctgttttgtg 366  Q
    | |||||||  ||||||||||||||| |||||    
T  27096193 tgttttgaatcctattgcattgctgtgttgtg 27096224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 368
Target Start/End: Original strand, 46345017 - 46345165
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 309  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| || ||||  || || ||||||||| |||   |          |||| ||||||    
T  46345017 gttataagaacagaacagacataggagtttccaaaacttcattgttgcggttttcattctcttaggtgcgattttctac----------cattccaagcc 46345106  T
Q  310 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||| ||||||||||||| ||   |||||||||| |||||||||||    
T  46345107 aatttcaatcacaaaaacaagtaagtttttttaatcttattgcattgttgttttgtggt 46345165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 2432936 - 2432866
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcga 280  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || ||||  || || |||||||||    
T  2432936 gttataagaatagaacagacataggagtttccaaaactccattgttgcggttttcattctcttaggtgcga 2432866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 11377345 - 11377482
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    |||||||||||||||||||| |||||||||||||| | ||   ||||||||||||| |  ||    ||| |||| |||||||||||||| ||||||| ||    
T  11377345 cataggagtttccaaaactcaattgttacgttttttgcttcaataggtgcgaatttcacaaaccataagccattccaagccaatttcaagcacaaaatta 11377444  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    | ||||||||| |||  | ||||| ||||| |||||||    
T  11377445 attaagtttttcgaatccaattgcgttgctattttgtg 11377482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 368
Target Start/End: Complemental strand, 41579717 - 41579568
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 309  Q
    |||||||||| ||||  ||||||||||||||||||||||||||| | || ||||  || || ||||||||| |||  ||          |||| ||||||    
T  41579717 gttataagaacagaactgacataggagtttccaaaactccattgctgcggttttcattctcttaggtgcgattttctgc----------cattccaagcc 41579628  T
Q  310 aatttcaatcacaaaaataagtaagtt-ttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||||  |||||||||||    
T  41579627 aatttcaatcacaaaaacaagtaagtttttttgaatcctattgcattattgttttgtggt 41579568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 366
Target Start/End: Original strand, 34470483 - 34470550
Alignment:
Q  299 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||  ||||||||||||| |||||||    
T  34470483 cattccaagccaatttcaagcacaaaatcaagtaagttttttgaatcctattgcattgctattttgtg 34470550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 2430066 - 2430016
Alignment:
Q  402 tatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||||    
T  2430066 tatataggttttattgatttcatgatatgttaggatagtttaggttagaat 2430016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 49217357 - 49217415
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaa 451  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||| |||| |||||||    
T  49217357 aatttcgattatatagattttattgattttatgatatgttgggatagtttatgttagaa 49217415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 24701019 - 24701056
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24701019 ttgattttatgatatgttaggataatttaggttagaat 24701056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 30194426 - 30194379
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgtt 255  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  30194426 tctgttatatgaatagaaca-acataggagtttccaaaactccattgtt 30194379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 366
Target Start/End: Original strand, 51011672 - 51011808
Alignment:
Q  230 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 329  Q
    |||| |||||| |||||||||||||||||||||| | || | ||||||||||||| |  ||    ||||||||  ||| ||||||||| |||||||  ||    
T  51011672 atagaagtttcaaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagtcattcgaagtcaatttcaagcacaaaatcaa 51011771  T
Q  330 gtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||| ||||||| |  ||| ||| ||||| |||||||    
T  51011772 gtaaattttttgtatcctactgcgttgctattttgtg 51011808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 2645740 - 2645777
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  2645740 ttgattttatgatatgttaggatagtttaggttagaat 2645777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 3493884 - 3493921
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  3493884 ttgattttatgatatgttaggatagtttaggttagaat 3493921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 3497578 - 3497615
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  3497578 ttgattttatgatatgttaggatagtttaggttagaat 3497615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 10051779 - 10051840
Alignment:
Q  305 aagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||| |||||||  ||||||| ||||||||   |||||||||||| |||||||    
T  10051779 aagccaatttcaagcacaaaatcaagtaaggtttttgaatcatattgcattgctattttgtg 10051840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 34051088 - 34051051
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  34051088 ttgattttatgatatgttaggatagtttaggttagaat 34051051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 36136373 - 36136336
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  36136373 ttgattttatgatatgttaggatagtttaggttagaat 36136336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 46406366 - 46406329
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  46406366 ttgattttatgatatgttaggatagtttaggttagaat 46406329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 49138912 - 49138949
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  49138912 ttgattttatgatatgttaggatagtttaggttagaat 49138949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 50998429 - 50998392
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  50998429 ttgattttatgatatgttaggatagtttaggttagaat 50998392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 51694178 - 51694215
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  51694178 ttgattttatgatatgttaggatagtttaggttagaat 51694215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 52568063 - 52568100
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  52568063 ttgattttatgatatgttaggatagtttaggttagaat 52568100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 54391803 - 54391766
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  54391803 ttgattttatgatatgttaggatagtttaggttagaat 54391766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 34691909 - 34691964
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||| | |||||| |||||||| ||||||||||||| |||| ||||||||    
T  34691909 ttcgattatattgattttat-gattttatgatatgttaggatagtttaagttagaat 34691964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 424
Target Start/End: Complemental strand, 41805466 - 41805438
Alignment:
Q  396 ttcgattatataggttttattgattttat 424  Q
    |||||||||||||||||||||||||||||    
T  41805466 ttcgattatataggttttattgattttat 41805438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 49611722 - 49611686
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  49611722 tgattttatgatatgttaggatagtttaggttagaat 49611686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 424
Target Start/End: Original strand, 55205554 - 55205582
Alignment:
Q  396 ttcgattatataggttttattgattttat 424  Q
    |||||||||||||||||||||||||||||    
T  55205554 ttcgattatataggttttattgattttat 55205582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 424
Target Start/End: Original strand, 55267699 - 55267727
Alignment:
Q  396 ttcgattatataggttttattgattttat 424  Q
    |||||||||||||||||||||||||||||    
T  55267699 ttcgattatataggttttattgattttat 55267727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 209 - 452
Target Start/End: Complemental strand, 8268743 - 8268501
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||| |||||||  || |||||| ||||| |||||||||||||||| ||||  ||||    
T  8268743 tgttataagaacaaaatagacatacgagtttccaaaactccattgttgcgttttttattctcctagatgcgattttgagcaatttcaagccattctaagc 8268644  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatatag 408  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||| | ||                |||  |||||||||||||||    
T  8268643 caatttcaatcacaaaaacaagtaagttttttgaattctattgaattgttgttttgtgggtgaa-tttttttttttgtttgttatatttcgattatatag 8268545  T
Q  409 gttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  8268544 gttttattgattttatgatatgttaggatagtttaggttagaat 8268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 43493278 - 43493119
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||| | | |||||||||||| |||||||||||||||| |||| |||||    
T  43493278 tgttataagaacagaacagacataggagtttcaaaaactccattgttacattttttgatctcctaggtgcgattttgagcaatttcaagccattccaagc 43493179  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  43493178 caatttcaatcacaaaaacaagcaagttttttgaatcctattgcattgttgttttgtggt 43493119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 41497552 - 41497711
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||  || |||| ||||||| |||||||||||| ||||||||  ||||    
T  41497552 tgttataagaacagaacagacataggattttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattcaaagc 41497651  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| | |||||||||||    
T  41497652 caatttcaatcacaaaaataagtaagttttttgaatcctattgcatcgttgttttgtggt 41497711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 35493335 - 35493176
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||||||||||| | | ||| || || || ||||||||||||||||||||| |||||    
T  35493335 tgttataagaacagaacagacatgagagtttccaaaactccattgttacgttttttgatctccaagttgtgattttgagcaatttcaagtcattccaagc 35493236  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| |||||||||||    
T  35493235 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgtggt 35493176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 40675817 - 40675975
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||| |||||| |||||| ||||||||||||||| ||||||||| |||||| || |||||| ||||| |||||||||||| |||||||| |||||    
T  40675817 tgttataagtatagaacagacattggagtttccaaaactgcattgttacatttttgattctcctag-tgcgattttgagcaatttgaagtcattccaagc 40675915  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| |||| |||||||||||  ||||||||||| |||||||||||    
T  40675916 caatttcaatcacaaaaacaagtcagttttttgaatcctattgcattgttgttttgtggt 40675975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 209 - 452
Target Start/End: Complemental strand, 23409495 - 23409254
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||| |||||||||||| ||| |||| |||||    
T  23409495 tgttataagtacggaacagacataggagtttccaaaactccattgttacgttttta-ttctcctaggtgcgattttgagcaatttgaagccattccaagc 23409397  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt-taaannnnnnnnnnnnnnnngttgaatttcgattatata 407  Q
    |||||||||||||  ||| ||||||||||||||||  ||||||||||| |||||||||||  ||                 ||| |||||||||||||||    
T  23409396 caatttcaatcac--aaacaagtaagttttttgaatcctattgcattgttgttttgtggtcgaattgttttttttttttttgttaaatttcgattatata 23409299  T
Q  408 ggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||| ||||||||||||| ||||||||||||| |||||||||||||    
T  23409298 ggtgttattgattttatgatatgttaggatagtttaggttagaat 23409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 209 - 452
Target Start/End: Original strand, 19470037 - 19470282
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| | |||||||| ||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||||||| |||||    
T  19470037 tgttataagaacagaacaaacataggaatttccaaaactccattgttacatttttt-ttttcctaggtgcgattttgagcaatttcaagtcattccaagc 19470135  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggttaaa---nnnnnnnnnnnnnnnngttgaatttcgattata 405  Q
    ||||| || | ||||||| ||||||||||||||||   |||||||||| |||||||||||  ||                   ||| |||||||||||||    
T  19470136 caattccatttacaaaaacaagtaagttttttgaatcatattgcattgttgttttgtggtcgaattgtttgttttttatttttgttaaatttcgattata 19470235  T
Q  406 taggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||    
T  19470236 taggttttattgattttatgatatgttaagatagtttaggttagaat 19470282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 3943185 - 3943024
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttt-tcctaggtgcgaatttgagcaatttcaagtcatttcaag 307  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||  | | ||  |||||||| ||||||| ||||||||||||| ||||    
T  3943185 tgttataagaacagaacagacataggagttttcaaaactccattgttacgttttttttatctcaaaggtgcgattttgagctatttcaagtcattccaag 3943086  T
Q  308 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    ||||||||||||||||||| |||||| |||||| ||  ||||||||||| ||||||| ||||    
T  3943085 ccaatttcaatcacaaaaacaagtaaatttttttaatcctattgcattgttgttttgcggtt 3943024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 16583588 - 16583427
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| | ||| |||| | | ||| |||||||| ||||||| ||||||||||||| |||||    
T  16583588 tgttataagaacagaacagacataggagtttccaaaactccattatgacgctttttgatctccaaggtgcgattttgagctatttcaagtcattccaagc 16583489  T
Q  309 caatttcaatcacaaaaataagtaagtt-ttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||| |||| ||  ||||||||||| ||||||| ||||    
T  16583488 caatttcaatcacaaaaacaagtaagttttttttaatcctattgcattgttgttttgcggtt 16583427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 34639307 - 34639147
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || |||||||||||||||| ||||||||||||||| ||||| | | ||| |||||||| ||||||| |||||||| |||| |||||    
T  34639307 tgttataagaacaaaacagacataggagtttcctaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagccattccaagc 34639208  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||| ||||||| ||||||||||||| || | |||| ||||| ||||||| ||||    
T  34639207 caatttcaataacaaaaacaagtaagtttttttaattttattacattgttgttttgcggtt 34639147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 23719444 - 23719582
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  || |  |||||||| |||||||||||||| ||||||| |    
T  23719444 acataggagtttccaaaactccattgttacgttttttgcttccgtaggtgcgaatttcacaaagtataagtcattccaagccaatttcaagcacaaaatt 23719543  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||   ||||||||||||| |||||||    
T  23719544 aagtaagttttttgagtcctattgcattgctattttgtg 23719582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 24107116 - 24107254
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  || |  |||||||| |||||||||||||| ||||||| |    
T  24107116 acataggagtttccaaaactccattgttacgttttttgcttccgtaggtgcgaatttcacaaagtataagtcattccaagccaatttcaagcacaaaatt 24107215  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||   ||||||||||||| |||||||    
T  24107216 aagtaagttttttgagtcctattgcattgctattttgtg 24107254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 369
Target Start/End: Original strand, 29090655 - 29090816
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttg-gttttcctaggtgcgaatttgagcaatttcaagtcatttcaag 307  Q
    ||||||||||| | || ||||||| ||||||||||||||||||||||||||||||  | | ||| | |||||| ||||||| |||||||  |||| ||||    
T  29090655 tgttataagaacaaaacagacatacgagtttccaaaactccattgttacgtttttttgatctccaatgtgcgattttgagctatttcaacccattccaag 29090754  T
Q  308 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||| |||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  29090755 ccaatttcaaccacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 29090816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 23786204 - 23786364
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttt-tcctaggtgcgaatttgagcaatttcaagtcatttcaag 307  Q
    ||||||||||| | || | |||||||||||| ||||||||||||||| | |||||   || |||| | ||||| |||||||||||| |||||||| ||||    
T  23786204 tgttataagaacataacaaacataggagttttcaaaactccattgttgcatttttttattctccttgctgcgattttgagcaatttgaagtcattccaag 23786303  T
Q  308 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||||| ||||||||||| | ||  ||||||||||| |||||||||||    
T  23786304 ccaatttcaatcacaaaaacaagtaagttttctaaatcctattgcattgttgttttgtggt 23786364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 228 - 368
Target Start/End: Complemental strand, 28477042 - 28476902
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| |||||||| || ||| || ||||| ||||||  |||| ||| |||| |||||||||||||||||||||||     
T  28477042 acataggagtttccaaaactccattgttgcgtttttgattatccaagttgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaac 28476943  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||| ||||  ||| ||||||| || ||||||||    
T  28476942 aagtaagttttgtgaatcctactgcattggtgctttgtggt 28476902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 3935962 - 3936101
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  3935962 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 3936061  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  3936062 agtaagttttttgaatcctattgcattgttgctttgtggt 3936101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 17426339 - 17426200
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    |||| |||||||||||||||||||||| |||||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  17426339 catatgagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 17426240  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  17426239 agtaagttttttgaatcctattgcattgttgctttgtggt 17426200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 22003375 - 22003236
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    |||||||||||||||||||| |||||| ||||||   || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  22003375 cataggagtttccaaaactcaattgttgcgttttaaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 22003276  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||  || ||||||||    
T  22003275 agtaagttttttgaatcctattgcattcttgctttgtggt 22003236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 366
Target Start/End: Complemental strand, 5422195 - 5422057
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||| ||||||||||||||||||||||| | || | ||||||||||||| |  ||    ||| ||||||||||||||||||| |||||||      
T  5422195 acataggagttttcaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagccatttcaagccaatttcaagcacaaaatc 5422096  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||| |||||||| ||||| |||||||    
T  5422095 aagtaagttttttgaattctattgcgttgctattttgtg 5422057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 39798541 - 39798681
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||| ||||||||||||||| ||||||||  | ||  || ||||| |||||   |||| ||| |||| |||||||||||||||||||||||     
T  39798541 acataggagttttcaaaactccattgttgcgtttttgagtatcaaagttgcgattttgaatcattttaagccattacaagccaatttcaatcacaaaaac 39798640  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  39798641 aagtaagttttttgaatcctattgcattgttgctttgtggt 39798681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 10358896 - 10359025
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||  ||| |||||     || |||| |||||||||||||| |||||||  |    
T  10358896 cataggagtttccaaaactccattgttacgtttttggatttctcaggtgcgtttttcagcaaacgtcagccattccaagccaatttcaaacacaaaatca 10358995  T
Q  329 agtaagttttttgaactctattgcattgct 358  Q
    |||||||||||||||  |||||||||||||    
T  10358996 agtaagttttttgaatcctattgcattgct 10359025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 43984275 - 43984161
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  43984275 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 43984176  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  43984175 agtaagttttttgaa 43984161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 34520065 - 34520202
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||| ||||||||||||||||||| ||||  |||||||  ||| |||||     || |||| ||||| |||||||| |||||||  |    
T  34520065 cataggagtttccaaaaatccattgttacgtttttggatttctcaggtgcgtttttcagcaaacagcagccattccaagctaatttcaagcacaaaatca 34520164  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||  ||||||||||||| |||||||    
T  34520165 agtaagttttttgaatcctattgcattgctattttgtg 34520202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 43493068 - 43493012
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43493068 ttcgattatataggttttattgattttatgatatgttaggataatttaggttagaat 43493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 37311041 - 37311199
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||| ||| |||| | |||||||||||||||||| ||||||||||||||||| | || | ||||||||||||| |  ||    ||| || | |||    
T  37311041 tctgttatatgaacagaaca-acataggagtttccaaaaatccattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccaatccaa 37311139  T
Q  307 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||| |||||||  ||||||||||| ||||  ||||||||||||| |||||||    
T  37311140 gccaatttcaagcacaaaatcaagtaagttttctgaatcctattgcattgctattttgtg 37311199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 363
Target Start/End: Complemental strand, 14181815 - 14181673
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 310  Q
    ||||||||| | || ||||||| ||||||||||||||| ||| |||||||||| | | ||| ||||||          |||||| || |||| |||||||    
T  14181815 ttataagaacataacagacataagagtttccaaaactctattattacgttttttgatatccaaggtgc----------aatttctagccattccaagcca 14181726  T
Q  311 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtttt 363  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||| ||||||    
T  14181725 atttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgtttt 14181673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 35493136 - 35493080
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  35493136 ttcgattatataggttttcttgattttatgatatgttaggatagtttaggttagaat 35493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 40676007 - 40676062
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggtta 448  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  40676007 aatttcgattatataggttttattgattttatgatatcttaggatagtttaggtta 40676062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 45435180 - 45435122
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgag 287  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||    
T  45435180 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgag 45435122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 2917842 - 2917911
Alignment:
Q  299 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||| |||||||||||||| |||||||| |||||| | |||||||  ||||| ||||| |||||||||||    
T  2917842 cattccaagccaatttcaagcacaaaaacaagtaaatgttttgaatcctattacattgttgttttgtggt 2917911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 23786385 - 23786453
Alignment:
Q  389 gttgaatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaat 452  Q
    ||| |||||||||||||||||||      |||||||||||| ||||||||||||| |||||||||||||    
T  23786385 gttaaatttcgattatataggttcgattatattgattttatgatatgttaggatagtttaggttagaat 23786453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 17537320 - 17537391
Alignment:
Q  295 aagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||| ||||| |||||||| |||||||  ||||||||||| ||||  ||||||||||||  |||||||    
T  17537320 aagtcattccaagctaatttcaagcacaaaatcaagtaagttttgtgaatcctattgcattgcaattttgtg 17537391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 41497736 - 41497807
Alignment:
Q  389 gttgaatttcgattatataggttttattgattttataat--------atgttaggataatttaggttagaat 452  Q
    ||| |||||| ||||||||||||||||||||||||| ||        |||||||||||||||||||||||||    
T  41497736 gttaaatttcaattatataggttttattgattttatgattttatgatatgttaggataatttaggttagaat 41497807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 3936161 - 3936198
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  3936161 ttgattttatgatatgttaggatagtttaggttagaat 3936198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 16583370 - 16583333
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  16583370 ttgattttatgatatgttaggatagtttaggttagaat 16583333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 17426140 - 17426103
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  17426140 ttgattttatgatatgttaggatagtttaggttagaat 17426103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 3942956 - 3942920
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  3942956 tgattttatgatatgttaggatagtttaggttagaat 3942920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 33405710 - 33405662
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgtt 255  Q
    ||||||||||||| |  | | ||||||||||||||||||||||||||||    
T  33405710 tctgttataagaacattacaaacataggagtttccaaaactccattgtt 33405662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 35019656 - 35019815
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    |||||||| || | || |||||| ||||||||||||||||||||||| |||||||| || |||| ||||||| |||||||||||| |||||||| |||||    
T  35019656 tgttataataacataacagacatcggagtttccaaaactccattgttgcgtttttgattctccttggtgcgattttgagcaatttgaagtcattccaagc 35019755  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  35019756 caatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 35019815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 29076317 - 29076157
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| ||||||||||||| ||| |    
T  29076317 tgttataagaacaaaacagacataggagtttccaaaactccattgttacgttttttgatctccgaagtgcgattttgagctatttcaagtcattccaaac 29076218  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29076217 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29076157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 29109850 - 29109690
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| ||||||||||||| ||| |    
T  29109850 tgttataagaacaaaacagacataggagtttccaaaactccattgttacgttttttgatctccgaagtgcgattttgagctatttcaagtcattccaaac 29109751  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29109750 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29109690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 29111290 - 29111130
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| ||||||||||||| ||| |    
T  29111290 tgttataagaacaaaacagacataggagtttccaaaactccattgttacgttttttgatctccgaagtgcgattttgagctatttcaagtcattccaaac 29111191  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29111190 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29111130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 34801583 - 34801743
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||  || |||||||||||| |||||||||||| ||| |||| |||||    
T  34801583 tgttataagtatagaaaagacataggagttttcaaaactccattgttacgttttttattctcctaggtgcgattttgagcaatttgaagccattccaagc 34801682  T
Q  309 caatttcaatcaca-aaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||| |||| ||||||||||||||||  ||||||||||  |||||||||||    
T  34801683 caatttcaatcacacaaaaaaagtaagttttttgaatcctattgcattcttgttttgtggt 34801743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 29068259 - 29068099
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || | ||||||||||||| |||||||||||||||||||||| | | ||| |||||||| |||||||  ||||||| ||||||||||    
T  29068259 tgttataagaacaaaacaaacataggagtttctaaaactccattgttacgttttttgatctccaaggtgcgattttgagctctttcaagccatttcaagc 29068160  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29068159 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29068099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 29083506 - 29083346
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || | ||||||||||||| |||||||||||||||||||||| | | ||| |||||||| |||||||  ||||||| ||||||||||    
T  29083506 tgttataagaacaaaacaaacataggagtttctaaaactccattgttacgttttttgatctccaaggtgcgattttgagctctttcaagccatttcaagc 29083407  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||    
T  29083406 caatttcaatcacaaaaacaagtaagtttttttaattctattgcattgttgttttgcggtt 29083346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 255 - 452
Target Start/End: Original strand, 32026087 - 32026284
Alignment:
Q  255 tacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcat 354  Q
    |||||||||| || |||||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||  |||||| ||    
T  32026087 tacgtttttgattctcctaggtgcgattttgagcaatttcaagctattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgaat 32026186  T
Q  355 tgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    || |||||||||||  ||                ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32026187 tgttgttttgtggtcgaattgtttgtatttttttgttaaatttcgattatataggttttattgattttatgatatgttaggatagtttaggttagaat 32026284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 209 - 364
Target Start/End: Original strand, 13616320 - 13616475
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||  || |||| ||||||| || || |||||| ||| |||| |||||    
T  13616320 tgttataagaacagaacagacataggagtttccaaaactccattgttgcgttttttattatccttggtgcgatttcgaacaatttgaagccattccaagc 13616419  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttg 364  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| |||||||    
T  13616420 caatttcaatcacaaaaacaagtaagttttttaaatcctattgcattgttgttttg 13616475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 32691284 - 32691423
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| |||||||| ||||||||||| ||||||||||| |    
T  32691284 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcattttaagtcattacaagccaattttaatcacaaaaaca 32691383  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  |||||| |||| || ||||||||    
T  32691384 agtaagttttttgaatcctattgtattgttgctttgtggt 32691423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 210 - 368
Target Start/End: Complemental strand, 13404625 - 13404467
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 309  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||| || ||||  || || ||||||| | |||  || ||| ||||||||| ||| ||    
T  13404625 gttataagaatagaacatacataagagtttccaaaactccattgttgcggttttcattctcttaggtgcaattttctgccattccaagtcattccaatcc 13404526  T
Q  310 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||| ||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  13404525 aatttaaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 13404467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 211 - 365
Target Start/End: Complemental strand, 14124710 - 14124556
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 310  Q
    ||||||||| ||||  |||||||||||||||||||||| ||||||||||||||  || ||| |||||||| ||| ||| |||||||| |||| |||||||    
T  14124710 ttataagaacagaactgacataggagtttccaaaactctattgttacgttttttattctccaaggtgcgattttcagccatttcaagccattccaagcca 14124611  T
Q  311 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgt 365  Q
    |||||||||||||||| ||||| || || ||||   |||||||||| ||||||||    
T  14124610 atttcaatcacaaaaacaagtacgtgttctgaatcttattgcattgttgttttgt 14124556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 27641692 - 27641553
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||| ||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  27641692 cataggagtttccgaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 27641593  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  27641592 agtaagttttttgaatcctattgcattgttgctttgtggt 27641553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 11694001 - 11693887
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  11694001 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 11693902  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  11693901 agtaagttttttgaa 11693887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 34801777 - 34801836
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  34801777 aatttcgattatataggttttattgattttatgatatgttaggatactttaggttagaat 34801836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 17126973 - 17126862
Alignment:
Q  203 ttgatctgtt-ataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcat 301  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||| ||| ||||||||| |||  ||||||||| ||| | |||    |||||||    
T  17126973 ttgatctgtttataagaacagaacagacataggagtttccaaaactccatcgttgcgtttttggatttattaggtgcgattttcaccaagcataagtcat 17126874  T
Q  302 ttcaagccaatt 313  Q
    ||||||||||||    
T  17126873 ttcaagccaatt 17126862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 6207034 - 6206920
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||| ||||| | |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  6207034 cataggagtttccaaaacttcattgatgcgtttttaattttttaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 6206935  T
Q  329 agtaagttttttgaa 343  Q
    |||||||||||||||    
T  6206934 agtaagttttttgaa 6206920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 29068072 - 29068013
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||    
T  29068072 aatttcgattatatagattttattaattttatgatatgttaggatagtttaggttagaat 29068013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 29083318 - 29083259
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||    
T  29083318 aatttcgattatatagattttattaattttatgatatgttaggatagtttaggttagaat 29083259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 29109661 - 29109602
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||    
T  29109661 aatttcgattatatagattttattaattttatgatatgttaggatagtttaggttagaat 29109602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 12398658 - 12398521
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||| ||||||||||||||||||||| | | || | |||||||||| || |  ||    ||| ||||  ||||||||||||| |||||||  |    
T  12398658 cataggagttttcaaaactccattgttacgtttattgcttccataggtgcgaaatttacaaaccataagccattcaaagccaatttcaagcacaaaatca 12398559  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||  ||||||  ||||| |||||||    
T  12398558 agtaagttttttgaatcctattgtgttgctattttgtg 12398521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 14124527 - 14124486
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttag 434  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  14124527 aatttcgattatataggttttattgattttatgatttgttag 14124486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 13616502 - 13616564
Alignment:
Q  389 gttgaatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||| |||||||||||||| | |||  |||||||||| ||||||||||||| |||||||||||||    
T  13616502 gttaaatttcgattatattgatttg-ttgattttatgatatgttaggatagtttaggttagaat 13616564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 356
Target Start/End: Original strand, 30763412 - 30763543
Alignment:
Q  225 tagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaa 324  Q
    ||||||||||| ||| | || |||||||||| || ||||||  ||| || |||| | ||| | |||  | |||||||| |||||||||| ||| ||||||    
T  30763412 tagacataggaattttcgaatctccattgttgcggttttgggattcttatgtgcaattttcaccaagcttaagtcattccaagccaattacaagcacaaa 30763511  T
Q  325 aataagtaagttttttgaactctattgcattg 356  Q
    |  |||||||| |||||||  |||||||||||    
T  30763512 atcaagtaagtgttttgaatcctattgcattg 30763543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 32691444 - 32691506
Alignment:
Q  389 gttgaatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||| |||||||||||||| | |||  |||||||||| ||||||||||||| |||||||||||||    
T  32691444 gttaaatttcgattatattgatttg-ttgattttatgatatgttaggatagtttaggttagaat 32691506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 6206835 - 6206798
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  6206835 ttgattttatgatatgttaggatagtttaggttagaat 6206798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 11693802 - 11693765
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  11693802 ttgattttatgatatgttaggatagtttaggttagaat 11693765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 424
Target Start/End: Original strand, 35019857 - 35019885
Alignment:
Q  396 ttcgattatataggttttattgattttat 424  Q
    |||||||||||||||||||||||||||||    
T  35019857 ttcgattatataggttttattgattttat 35019885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 49924936 - 49925095
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || |||||||||||||||||||||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| |||||    
T  49924936 tgttataagaacaaaacagacataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaagc 49925035  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||| ||||||||  ||||||||||| |||||||||||    
T  49925036 caatttcaatcacaaaaacaagtaagatttttgaatcctattgcattgttgttttgtggt 49925095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 236 - 452
Target Start/End: Complemental strand, 41804000 - 41803783
Alignment:
Q  236 gtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataagtaagt 335  Q
    |||| ||||||||||||||||| |||||  || |||||||||| | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  41804000 gttttcaaaactccattgttacattttttattctcctaggtgcaattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaataagtaagt 41803901  T
Q  336 tttttgaactctattgcattgctgttttgtggt-taaannnnnnnnnnnnnnnngttgaatttcgattatataggttttattgattttataatatgttag 434  Q
    ||||||||  ||||||||||| |||||||||||  ||                 ||| |||||||||||||||||||||||||||||||| |||||||||    
T  41803900 tttttgaatcctattgcattgttgttttgtggtcgaattgtttgttttttttttgttaaatttcgattatataggttttattgattttatgatatgttag 41803801  T
Q  435 gataatttaggttagaat 452  Q
    |||| |||||||||||||    
T  41803800 gatagtttaggttagaat 41803783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 14172167 - 14172326
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||||||||||||||||||  |||||||||||||| | | |||||||||||| ||| |||||||||||  |||| |||||    
T  14172167 tgttataagaacagaacagacataggagtttccaaaactttattgttacgttttttgatctcctaggtgcgattttcagcaatttcaaaccattccaagc 14172266  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| | ||||||||||||||  ||||||||||| |||||||||||    
T  14172267 caatttcaatcacaaaaacaggtaagttttttgaatcctattgcattgttgttttgtggt 14172326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 51271584 - 51271425
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||| |||||||  || |||| | ||||| |||||||||||| |||||||| |||||    
T  51271584 tgttataagaacagaacagacataggagtttccaaaacttcattgttgcgttttttattctccttgctgcgattttgagcaatttgaagtcattccaagc 51271485  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  51271484 caatttcaatcacaaaaacaagtaagttttatgaatcctattgcattgttgttttgtggt 51271425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 209 - 363
Target Start/End: Complemental strand, 44598899 - 44598745
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| | | ||| |||||||| ||||||| ||||||||||||| |||||    
T  44598899 tgttataagaacagaacagacataggagtttcaaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagtcattccaagc 44598800  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtttt 363  Q
    |||||||||| ||||||| ||||||||||||| ||  ||||||||||| ||||||    
T  44598799 caatttcaataacaaaaacaagtaagtttttttaatcctattgcattgttgtttt 44598745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 209 - 369
Target Start/End: Original strand, 27485113 - 27485272
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | ||| | |||||| ||||||| |||||||| |||| |||||    
T  27485113 tgttataagaatagaacagacataggagtttccaaaactccattgttacgttttttgatctccaatgtgcgattttgagctatttcaagccattccaagc 27485212  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| |||||| |||||| ||  ||||||||||| ||||||| ||||    
T  27485213 caatttcaatcacaaaaacaagtaa-tttttttaatcctattgcattgttgttttgcggtt 27485272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 36911690 - 36911530
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttg-gttttcctaggtgcgaatttgagcaatttcaagtcatttcaag 307  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||| |||||  | | |||||||||||| ||| |||||||||||| |||||||||    
T  36911690 tgttataagaacataatagacatatgagtttccaaaactccattgttacatttttttgatctcctaggtgcgattttcagcaatttcaagccatttcaag 36911591  T
Q  308 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||||| | ||||||||||||||   |||||||||| |||||||||||    
T  36911590 ccaatttcaatcacaaaaacaggtaagttttttgaatcttattgcattgttgttttgtggt 36911530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 209 - 366
Target Start/End: Complemental strand, 49398463 - 49398307
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || ||||||||||||||||||||||| ||||||||||||||  || |||||||||| | |||||||||||| |||||||| ||| |    
T  49398463 tgttataagaacataacagacataggagtttccaaaactc-attgttacgttttttattctcctaggtgctattttgagcaatttgaagtcattccaaac 49398365  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||    
T  49398364 caatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtg 49398307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 42570201 - 42570361
Alignment:
Q  209 tgttataagaatagaatagacata-ggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaag 307  Q
    ||||||||| | |||| ||||||  |||||||||||||||||||||||| ||||||  || |||||||||||| |||||||||||| ||||||||  |||    
T  42570201 tgttataagtacagaacagacatttggagtttccaaaactccattgttatgttttttattctcctaggtgcgattttgagcaatttgaagtcattcaaag 42570300  T
Q  308 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
     |||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||    
T  42570301 tcaatttcaatcacaaaaacaagtaagttttttgaatcttattgcattgttgttttgtggt 42570361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 209 - 369
Target Start/End: Original strand, 44336329 - 44336489
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| | | ||| | |||| | ||||||  |||||||| |||| |||||    
T  44336329 tgttataagaacagaacagacataggagtttccaaaactcaattgttacgttttttgatctccaatgtgcaattttgagttatttcaagccattccaagc 44336428  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  44336429 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 44336489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 26633606 - 26633766
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttt-tcctaggtgcgaatttgagcaatttcaagtcatttcaag 307  Q
    ||||||||| | |||| | |||| |||||||||||||||||| ||||||||||||   || |||||| ||||| |||||||||||| |||||||| ||||    
T  26633606 tgttataagtacagaacatacattggagtttccaaaactccaatgttacgtttttttattctcctagatgcgattttgagcaatttgaagtcattccaag 26633705  T
Q  308 ccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||||| || |||||||||| ||  ||||||||||| |||||||||||    
T  26633706 ccaatttcaatcacaaaaacaactaagtttttttaatcctattgcattgttgttttgtggt 26633766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 13149029 - 13148889
Alignment:
Q  221 agaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatca 320  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| ||||||      ||||||||| || ||||||||||||||    
T  13149029 agaacagacataggagtttccaaaactccattgttatgtttttggttctcctaggtacgattttgag------caagtcattccaggccaatttcaatca 13148936  T
Q  321 caaaaataagtaagttttttgaactctattgcattgctgttttgtgg 367  Q
    |||||| ||||||||||||| ||  ||||||||| | ||||||||||    
T  13148935 caaaaacaagtaagtttttttaatcctattgcatcgttgttttgtgg 13148889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 369
Target Start/End: Original strand, 29760604 - 29760743
Alignment:
Q  230 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 329  Q
    |||||||||| |||||||||||||||||||||||   | ||| |||||||| ||||||  |||||||||||||  |||||||||||||||||||||| ||    
T  29760604 ataggagttttcaaaactccattgttacgtttttttatctccaaggtgcgattttgagttatttcaagtcattctaagccaatttcaatcacaaaaagaa 29760703  T
Q  330 gtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    ||||||||||| ||  ||||||||||| ||||||| ||||    
T  29760704 gtaagtttttttaatcctattgcattgttgttttgcggtt 29760743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 13633964 - 13634104
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| ||||||||  | ||| || ||||| |||||   |||| ||| |||| |||||||||||||||||||||||     
T  13633964 acataggagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgaatcatttgaagacattacaagccaatttcaatcacaaaaac 13634063  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||  ||||||||||| || ||||||||    
T  13634064 aagtaagttttttgaatcctattgcattgttgctttgtggt 13634104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 35524818 - 35524967
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||  ||||||| |||||||||||||||||||||| | | ||| |||||||| ||||||||||||          |||||    
T  35524818 tgttataagaacagaacagacatgagagtttcaaaaactccattgttacgttttttgatctccaaggtgcgattttgagcaattt----------caagc 35524907  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  35524908 caatttaaatcacaaaaataattaagttttttgaatcctattgcattgctgttttgtggt 35524967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 29437995 - 29437890
Alignment:
Q  227 gacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaa 326  Q
    ||||||||||||||||||||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| ||| |||||||||||||||||||    
T  29437995 gacataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaaaccaatttcaatcacaaaaa 29437896  T
Q  327 taagta 332  Q
     |||||    
T  29437895 caagta 29437890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 19161991 - 19162130
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| | |||||  || ||| |||||||| |||||   |||| ||| |||| ||||||||||||||||||||||| |    
T  19161991 cataggagtttccaaaactccattgttgcattttttattatccaaggtgcgattttgaatcatttgaagccattccaagccaatttcaatcacaaaaaca 19162090  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||  || ||||||||    
T  19162091 agtaagttttttgaatcctattgcatttttgctttgtggt 19162130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 49429135 - 49428996
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||| ||  |||| ||||||||  |||||||||||||||||||||| |    
T  49429135 cataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttaagtcatttgaagtcattctaagccaatttcaatcacaaaaaca 49429036  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||   || |||||||| || ||||||||    
T  49429035 agtaagttttttgattacttttgcattgttgctttgtggt 49428996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 210 - 368
Target Start/End: Complemental strand, 6437532 - 6437374
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcc 309  Q
    |||||||||| |||| || |||||||||||| |||||||||||||| || ||||  || || ||||||||| |||  |  ||| |||| |||| |||| |    
T  6437532 gttataagaacagaacaggcataggagtttctaaaactccattgttgcggttttcattctcttaggtgcgattttctgtcattccaagccattacaagtc 6437433  T
Q  310 aatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||| |||||||||||    
T  6437432 aatttcaatcacaaaaacaagtaaattttttgaatcctattgcattgttgttttgtggt 6437374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 366
Target Start/End: Complemental strand, 23344380 - 23344242
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||| ||||||||||||||| | || | ||||||||||||| |  ||    ||| |||| |||||||||||||| |||||||      
T  23344380 acataggagtttccaaaacttcattgttacgttttttgcttccataggtgcgaatttcacaaagcataagccattccaagccaatttcaagcacaaaatc 23344281  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  23344280 aagtaagttttttgaattctattgcattgctattttgtg 23344242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 38043549 - 38043687
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    |||||||| |||||||||||||| |||||||      
T  38043549 acataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagtcattccaagccaatttcaaacacaaaatc 38043648  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||||||  ||||||| ||||| |||||||    
T  38043649 aagtaagttttttgaatcctattgcgttgctattttgtg 38043687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 39855589 - 39855727
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat- 327  Q
    ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| |  ||    |||||||| |||||||||||||| |||||||||     
T  39855589 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttcacaaaccataagtcattccaagccaatttcaagcacaaaaatc 39855688  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||||||  ||||||| ||||| |||||||    
T  39855689 aagtaagttttttgaatcctattgcgttgctattttgtg 39855727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 24362363 - 24362525
Alignment:
Q  204 tgatctgttataagaatagaat-agacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatt 302  Q
    |||||||||||||||| | ||  ||||||||||||||||||||||||  |||||||| ||||||| ||||| |||||| ||| ||| |||||||| ||||    
T  24362363 tgatctgttataagaaaaaaaacagacataggagtttccaaaactcctctgttacgtgtttggttctcctatgtgcgattttcagccatttcaagccatt 24362462  T
Q  303 tcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
     ||| | |||||||||| ||||||     ||||||||||||  ||||||||||| ||||||||||||    
T  24362463 ccaatctaatttcaatcgcaaaaa----caagttttttgaatcctattgcattgttgttttgtggtt 24362525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 228 - 343
Target Start/End: Complemental strand, 48228286 - 48228170
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcaca-aaaa 326  Q
    |||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||| ||||    
T  48228286 acataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaaggcattccaagccaatttcaatcacaaaaaa 48228187  T
Q  327 taagtaagttttttgaa 343  Q
     ||||||||||||||||    
T  48228186 caagtaagttttttgaa 48228170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 229 - 363
Target Start/End: Original strand, 33285790 - 33285924
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaat-ttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    ||||||||||||||||||||||||||||||||||| | || | ||||||||||||| | ||||    ||| |||| |||||||||||||| |||||||      
T  33285790 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaatttca-caatgcataagccattccaagccaatttcaagcacaaaatc 33285888  T
Q  328 aagtaagttttttgaactctattgcattgctgtttt 363  Q
    ||||||||||||||||  ||||||||||||| ||||    
T  33285889 aagtaagttttttgaatcctattgcattgctatttt 33285924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 366
Target Start/End: Complemental strand, 14441009 - 14440872
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||  |||||||||||| | |||    ||| |||| |||||||||||||| |||||||      
T  14441009 acataggagtttccaaaactccactgttatgtttttggatttctcaggtgcgaatttca-caagcataagccattccaagccaatttcaagcacaaaatc 14440911  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||||||  ||||||||||| | |||||||    
T  14440910 aagtaagttttttgaatcctattgcattgttattttgtg 14440872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 26497882 - 26497804
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttg 285  Q
    ||||||||||||| |||| | |||||| |||||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  26497882 tctgttataagaacagaacatacatagaagtttccaaaactccagtgttacgtttttggttctcctaggtgcgattttg 26497804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 13974534 - 13974475
Alignment:
Q  393 aatttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||    
T  13974534 aatttcgattatataggttttattgattttatgatatgttaggatagttttggttagaat 13974475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 18975036 - 18974965
Alignment:
Q  297 gtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  18975036 gtcattccaagccaatttcgatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 18974965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 49260007 - 49260164
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||| ||| |||| || ||||| ||||||||||||||||||||||||||||||| ||||  | |||||  ||| |||||     || |||| |||    
T  49260007 tctgttatatgaacagaacag-catagcagtttccaaaactccattgttacgtttttggatttctcaagtgcg-ttttcagcaaacatcagccattccaa 49260104  T
Q  307 gccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||| |||||||  ||||||||||||||||   |||||||||||| |||||||    
T  49260105 gccaatttcaagcacaaaatcaagtaagttttttgaatcatattgcattgctattttgtg 49260164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 12789787 - 12789904
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaa 306  Q
    ||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||| | |||| ||||||||||||| |  ||    ||| |||| |||    
T  12789787 tctgttatatgaacagaacaga-ataggagtttccaaaactccattgttacgttttttgctttcataggtgcgaatttcacaaagcataagccattccaa 12789885  T
Q  307 gccaatttcaatcacaaaa 325  Q
    ||||||||||| |||||||    
T  12789886 gccaatttcaagcacaaaa 12789904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 46141941 - 46142005
Alignment:
Q  304 caagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||||||||||||| |||| |||||||||||  ||||||||||| |||||||||||    
T  46141941 caagccaatttcaatcacaaaaacaagtgagttttttgaatcctattgcattgttgttttgtggt 46142005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 13285253 - 13285196
Alignment:
Q  296 agtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgca 353  Q
    |||||||||||| |||||||||||||||||  |||||||| ||||||| |||||||||    
T  13285253 agtcatttcaaggcaatttcaatcacaaaatcaagtaagtgttttgaattctattgca 13285196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 14172349 - 14172420
Alignment:
Q  389 gttgaatttcgattatataggttttattgattttataat--------atgttaggataatttaggttagaat 452  Q
    ||| |||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||    
T  14172349 gttaaatttcgattatataggttttattgattttatgatttcatgatatgttaggataatttaggttagaat 14172420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 18974915 - 18974869
Alignment:
Q  402 tatataggttttattgattttataatatgttaggataatttaggtta 448  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  18974915 tatataggttttattgattttatgatatgctaggatagtttaggtta 18974869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 40531797 - 40531935
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    ||||||||||||||||||||| |||||||||| ||| | || | ||||||||||||| |  ||    | ||||||  | ||||| ||||| || ||||      
T  40531797 acataggagtttccaaaactctattgttacgtgttttgcttccataggtgcgaatttcacaaagcatacgtcattctacgccaaattcaagcataaaatc 40531896  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||||||||||||||||   |||||||||||| |||||||    
T  40531897 aagtaagttttttgaatcatattgcattgctattttgtg 40531935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 16530628 - 16530677
Alignment:
Q  206 atctgttataagaatagaatagacataggagtttccaaaactccattgtt 255  Q
    ||||||||||| ||  ||| ||||||||||||||||||||||||||||||    
T  16530628 atctgttataaaaacggaacagacataggagtttccaaaactccattgtt 16530677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 48228090 - 48228053
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| |||||||||||||||||||||||||||    
T  48228090 ttgattttatgatatgttaggataatttaggttagaat 48228053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 39063288 - 39063336
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgtt 255  Q
    ||||||||||||| |||| ||||||| |||||||||||||| |||||||    
T  39063288 tctgttataagaacagaacagacataagagtttccaaaacttcattgtt 39063336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 49398233 - 49398197
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||||||||||||||| |||||||||||||    
T  49398233 tgattttataatatgttaggatagtttaggttagaat 49398197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 13287543 - 13287484
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttc 270  Q
    ||||| ||| |||| |||||||||||||| ||||| ||||||||| ||||||||| ||||    
T  13287543 ttatatgaacagaacagacataggagttttcaaaattccattgttgcgtttttggatttc 13287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 424
Target Start/End: Original strand, 46142032 - 46142063
Alignment:
Q  393 aatttcgattatataggttttattgattttat 424  Q
    ||||||||||||||||||||||||||||||||    
T  46142032 aatttcgattatataggttttattgattttat 46142063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 452
Target Start/End: Complemental strand, 51271386 - 51271351
Alignment:
Q  417 gattttataatatgttaggataatttaggttagaat 452  Q
    |||||||| |||||||||||||||||||||||||||    
T  51271386 gattttatgatatgttaggataatttaggttagaat 51271351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 19260969 - 19261035
Alignment:
Q  214 taagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcga 280  Q
    |||||| |||| ||||||| || ||||||||||||||||||| || ||||| ||| | |||||||||    
T  19260969 taagaacagaacagacatatgaatttccaaaactccattgttgcggttttgatttccataggtgcga 19261035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 14771204 - 14771249
Alignment:
Q  211 ttataagaatagaataga-cataggagtttccaaaactccattgtt 255  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||    
T  14771204 ttataagaatagaacagaacctaggagtttccaaaactccattgtt 14771249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 19162191 - 19162228
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  19162191 ttgattttatgatatgttaggatagtttaggttagaat 19162228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 27485333 - 27485370
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  27485333 ttgattttatgatatgttaggatagtttaggttagaat 27485370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 44336548 - 44336585
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  44336548 ttgattttatgatatgttaggatagtttaggttagaat 44336585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 49428926 - 49428889
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaata 453  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  49428926 tgattttatgatatgttaggatagtttaggttagaata 49428889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 6437303 - 6437267
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  6437303 tgattttatgatatgttaggatagtttaggttagaat 6437267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 29760815 - 29760851
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  29760815 tgattttatgatatgttaggatagtttaggttagaat 29760851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 36911457 - 36911421
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    |||||| || |||||||||||||||||||||||||||    
T  36911457 tgatttcatgatatgttaggataatttaggttagaat 36911421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 424
Target Start/End: Original strand, 42570381 - 42570409
Alignment:
Q  396 ttcgattatataggttttattgattttat 424  Q
    |||||||||||||||||||||||||||||    
T  42570381 ttcgattatataggttttattgattttat 42570409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 42570409 - 42570445
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  42570409 tgattttatgatatgttaggatagtttaggttagaat 42570445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 211 - 369
Target Start/End: Complemental strand, 41276877 - 41276719
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagcca 310  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||| | | ||| |||| ||| ||||||| |||||||| |||| |||||||    
T  41276877 ttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtacgattttgagctatttcaagccattccaagcca 41276778  T
Q  311 atttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  41276777 atttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 41276719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 230 - 452
Target Start/End: Original strand, 41855464 - 41855686
Alignment:
Q  230 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 329  Q
    |||||||||| ||||||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| ||| ||||||||||||||||||| ||    
T  41855464 ataggagttttcaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaaaccaatttcaatcacaaaaacaa 41855563  T
Q  330 gtaagttttttgaactctattgcattgctgttttgtggttaaannnnnnnnnnnnnnnngttgaatttcgattatataggttttattgattttataatat 429  Q
    ||||||||||||||  | ||||||||| ||||||||||| |||                ||| |||||| ||||||||||||||||||||||||| ||||    
T  41855564 gtaagttttttgaatcccattgcattgttgttttgtggtcaaattttttttttttttttgttaaatttcaattatataggttttattgattttatgatat 41855663  T
Q  430 gttaggataatttaggttagaat 452  Q
    ||||||||| |||| ||||||||    
T  41855664 gttaggatattttaagttagaat 41855686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 26455669 - 26455509
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| | | ||| |||||||| ||||||| |||||||||||||   |||    
T  26455669 tgttataagaacagaataggcataggagtttccaaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagtcattctcagc 26455570  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggtt 369  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||||    
T  26455569 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttgcggtt 26455509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 22550858 - 22550699
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||| || |||| | ||||  |||||||||||| ||| |||| |||||    
T  22550858 tgttataagaacagaacggacataggagtttccaaaactccattgttgcgtttttgattatccttgctgcggttttgagcaatttgaagccattccaagc 22550759  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  22550758 caatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgttttgtggt 22550699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 28168596 - 28168437
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| |||| ||||||| |||||| ||||||| ||||||| |||||||  || |||| ||||||| ||||||||||||||||||||| |||||    
T  28168596 tgttataagaacagaacagacatatgagttttcaaaacttcattgttgcgttttttattctcctgggtgcgattttgagcaatttcaagtcattccaagc 28168497  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||| | |||||| |||| |||||| ||||    
T  28168496 caatttcaatcacaaaaacaagtaagttttttgagccctattgaattgttgttttttggt 28168437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 209 - 364
Target Start/End: Complemental strand, 44052219 - 44052064
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||||| ||  |||||||||||||||||||||| |||||||||||||| | | ||| |||||| | ||||||| |||||||| ||||||||||    
T  44052219 tgttataagaatataactgacataggagtttccaaaactctattgttacgttttttgatctccaaggtgccattttgagctatttcaagccatttcaagc 44052120  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttg 364  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||||| |||||||    
T  44052119 caatttcaatcacaaaaacaagtaagtttttttaatcctattgcattgttgttttg 44052064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 42605228 - 42605069
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | || ||| |||| ||||||||||||||||||||| |||||||  || |||| ||||||| |||||||||||| |||||||| |||||    
T  42605228 tgttataagaacataacagatatagtagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaagc 42605129  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||| ||||||||||||||||||||   ||||||| || |||||||||||    
T  42605128 caatttcaatcacagaaataagtaagttttttgaatcatattgcactgttgttttgtggt 42605069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 230 - 368
Target Start/End: Complemental strand, 40704132 - 40703995
Alignment:
Q  230 ataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaataa 329  Q
    |||||||||||||||||||||||||| ||||||| ||| | ||  |||||| |||||||||||| |||||||| ||||||||||||||||||||||| ||    
T  40704132 ataggagtttccaaaactccattgttgcgttttttgttcttctttgtgcgattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaacaa 40704033  T
Q  330 gtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||| |||||||   |||||||||| |||||||||||    
T  40704032 gtaagt-ttttgaatcatattgcattgttgttttgtggt 40703995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 41016512 - 41016652
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| |||||||||||||||||||||||     
T  41016512 acataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagccattccaagccaatttcaatcacaaaaac 41016611  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    || |||||||||||||  ||||||||||| || ||||||||    
T  41016612 aattaagttttttgaatcctattgcattgttgctttgtggt 41016652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 45066335 - 45066196
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    |||||||||||||||||||||||||||  |||||   || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  45066335 cataggagtttccaaaactccattgttgtgttttgaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 45066236  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  45066235 agtaagttttttgaatcctattgcattgttgctttgtggt 45066196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 483915 - 484054
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  ||||   |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  483915 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 484014  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  484015 agtaagttttttgaatcctattgcattgttgctttgtggt 484054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 15030983 - 15031121
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||| ||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| ||||||||||||||||||||||| |    
T  15030983 cataggagtttccaaaattccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaaca 15031082  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||| ||||||||  ||||||||||| || ||||||||    
T  15031083 agtaag-tttttgaatcctattgcattgttgctttgtggt 15031121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 42605020 - 42604964
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42605020 ttcgattatataggttttattgattttatgatatgttaggataatttaggttagaat 42604964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 26488440 - 26488303
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||||||||||| | || | |||||||||| || |  ||    ||| |||| ||||| |||||||| |||||||  |    
T  26488440 cataggagtttccaaaactccattgttacgttttttgcttccataggtgcgaaattcacaaaccataagccattccaagctaatttcaagcacaaaatca 26488341  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||  ||||||| ||||| |||||||    
T  26488340 agtaagttttttgaatcctattgcgttgctattttgtg 26488303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 38032310 - 38032447
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    |||||||||||||||||||| ||||||| |||||||| ||||  | |||||  ||| |||||     || |||| |||||||||||||| |||||||  |    
T  38032310 cataggagtttccaaaactcaattgttatgtttttggatttctcatgtgcgtttttcagcaaacatcagccattccaagccaatttcaagcacaaaatca 38032409  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||||||||||  ||||||||||||| |||||||    
T  38032410 agtaagttttttgaatcctattgcattgctattttgtg 38032447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 38872845 - 38872776
Alignment:
Q  299 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  38872845 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatcctattgcattgttgttttgtggt 38872776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 18438793 - 18438864
Alignment:
Q  299 catttcaagccaatttcaatcacaaaaataagtaagttttttgaa-ctctattgcattgctgttttgtggtt 369  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||    
T  18438793 cattccaagccaatttcaatcacaaaaacaagtaagttttttgaatccctattgcattgttgttttgtggtt 18438864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 19241142 - 19241214
Alignment:
Q  294 caagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||| |||| |||||||||||||| |||||||  ||||||||||||||||   |||||||||||| |||||||    
T  19241142 caagccattccaagccaatttcaaacacaaaatcaagtaagttttttgaatcatattgcattgctattttgtg 19241214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 19314326 - 19314398
Alignment:
Q  294 caagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||| |||| |||||||||||||| |||||||  ||||||||||||||||   |||||||||||| |||||||    
T  19314326 caagccattccaagccaatttcaaacacaaaatcaagtaagttttttgaatcatattgcattgctattttgtg 19314398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 26488256 - 26488185
Alignment:
Q  295 aagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    |||||||| ||||| |||||||| |||||||  ||||||||||||||||  ||||||| ||||| |||||||    
T  26488256 aagtcattccaagctaatttcaagcacaaaatcaagtaagttttttgaatcctattgcgttgctattttgtg 26488185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 22519536 - 22519478
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgag 287  Q
    ||||||||||||||||||||||||||| |||||||  |||| | |||||||| ||||||    
T  22519536 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgag 22519478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 38872728 - 38872678
Alignment:
Q  402 tatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||| |||| ||||||||||| ||||||||||||| |||||||||||||    
T  38872728 tatataagtttgattgattttatgatatgttaggatagtttaggttagaat 38872678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 22550657 - 22550602
Alignment:
Q  396 ttcgattatataggttttattgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||||| | |||||| |||||||| ||||||||||||| |||||||||||||    
T  22550657 ttcgattatattgattttat-gattttatgatatgttaggatagtttaggttagaat 22550602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 484114 - 484151
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  484114 ttgattttatgatatgttaggatagtttaggttagaat 484151  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 26455449 - 26455412
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  26455449 ttgattttatgatatgttaggatagtttaggttagaat 26455412  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 41016712 - 41016749
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  41016712 ttgattttatgatatgttaggatagtttaggttagaat 41016749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 41276659 - 41276622
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  41276659 ttgattttatgatatgttaggatagtttaggttagaat 41276622  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 18438938 - 18438974
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  18438938 tgattttatgatatgttaggatagtttaggttagaat 18438974  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 24862920 - 24862884
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  24862920 tgattttatgatatgttaggatagtttaggttagaat 24862884  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 28168366 - 28168330
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  28168366 tgattttatgatatgttaggatagtttaggttagaat 28168330  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 31170581 - 31170629
Alignment:
Q  295 aagtcatttcaagccaatttcaatcacaaaaataagtaagttttttgaa 343  Q
    |||||||| |||||||||||||| |||||||  |||||||| |||||||    
T  31170581 aagtcattccaagccaatttcaagcacaaaatcaagtaagtgttttgaa 31170629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 424
Target Start/End: Complemental strand, 40703951 - 40703923
Alignment:
Q  396 ttcgattatataggttttattgattttat 424  Q
    |||||||||||||||||||||||||||||    
T  40703951 ttcgattatataggttttattgattttat 40703923  T

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Target: scaffold0176 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 209 - 361
Target Start/End: Complemental strand, 3577 - 3425
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||||||  || |||| | ||||| |||||||||||| ||| |||| |||||    
T  3577 tgttataagaatataacagacataggagtttccaaaactccattgttgcgttttttattctccttgctgcgattttgagcaatttaaagccattccaagc 3478  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgtt 361  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||| ||||    
T  3477 caatttcaatcacaaaaacaagtaagttttctgaatcctattgcattgttgtt 3425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 627 - 525
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| |||||||| ||||||||||||||||||||||| |    
T  627 cataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatcacaaaaaca 528  T
Q  329 agt 331  Q
    |||    
T  527 agt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 3389 - 3325
Alignment:
Q  393 aatttcgattatataggttt-----tattgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||||||||||||      |||||||||||| |||||||||||||||||||||||||||    
T  3389 aatttcgattatataggttcgattatattgattttatgatatgttaggataatttaggttagaat 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 432 - 395
Alignment:
Q  415 ttgattttataatatgttaggataatttaggttagaat 452  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  432 ttgattttatgatatgttaggatagtttaggttagaat 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 10758 - 10916
Alignment:
Q  209 tgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagc 308  Q
    ||||||||||| | ||||| ||||||||||||||||||| ||||||| |||||||  || ||| |||||||| ||||||  |||| || |||||| ||||    
T  10758 tgttataagaacataatag-cataggagtttccaaaacttcattgttgcgttttttattatccaaggtgcgattttgagtcatttgaattcattttaagc 10856  T
Q  309 caatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| || ||||||||    
T  10857 caatttcaatcacaaaaacaagtaagttttttgaatcatattgcattgttgctttgtggt 10916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 366
Target Start/End: Complemental strand, 2165 - 2004
Alignment:
Q  205 gatctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttc 304  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||| | ||||| | || |  |||||||||||| |  ||    ||| |||| |    
T  2165 gatctgttataagaacagaacagacataggagtttccaaaactccattgttgcattttttgcttccaaaggtgcgaatttcacaaagcataagccattcc 2066  T
Q  305 aagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtg 366  Q
    ||| ||||||||| |||||||| ||||||||||| |||| ||||||| |||| |||||||||    
T  2065 aagtcaatttcaagcacaaaaacaagtaagttttgtgaattctattgtattgatgttttgtg 2004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 178 - 39
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    ||||||||||||||||||||||||||| |||||||  || ||| |||||||| ||||||  |||| ||| |||| |||| |||||| ||||||||||| |    
T  178 cataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagtcaattttaatcacaaaaaca 79  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  |||||| |||  || ||||||||    
T  78 agtaagttttttgaatcctattgtattattgctttgtggt 39  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 84679 - 84818
Alignment:
Q  229 cataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaata 328  Q
    |||| |||||||||||||||||||||| | |||||  |||| | |||||||| ||||||  |||| ||| ||||  |||||||||| ||||||||||| |    
T  84679 catatgagtttccaaaactccattgttgcatttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 84778  T
Q  329 agtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||||||||||||||  ||||||||||| || ||||||||    
T  84779 agtaagttttttgaatcctattgcattgttgctttgtggt 84818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 5429 - 5569
Alignment:
Q  228 acataggagtttccaaaactccattgttacgtttttggttttcctaggtgcgaatttgagcaatttcaagtcatttcaagccaatttcaatcacaaaaat 327  Q
    |||||||||||||||||||||||||||| |||||||   | ||| || ||| | ||||||  |||| ||| |||| ||||||||||||||||| |||||     
T  5429 acataggagtttccaaaactccattgttgcgttttttagtatccaagttgcaattttgagtcatttgaagccattacaagccaatttcaatcataaaaac 5528  T
Q  328 aagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    ||||||||||||| ||  ||||||||||| || ||||||||    
T  5529 aagtaagtttttttaatcctattgcattgttgctttgtggt 5569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 10303 - 10246
Alignment:
Q  207 tctgttataagaatagaatagacataggagtttccaaaactccattgttacgtttttg 264  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||| || |||||    
T  10303 tctgttataagaatataacagacataggaatttccaaaactccattgttgcggttttg 10246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 16561 - 16630
Alignment:
Q  299 catttcaagccaatttcaatcacaaaaataagtaagttttttgaactctattgcattgctgttttgtggt 368  Q
    |||| |||| ||||||||| |||||||| |||||| |||||||||  ||||||||||| |||||||||||    
T  16561 cattccaagtcaatttcaagcacaaaaacaagtaaattttttgaatcctattgcattgttgttttgtggt 16630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 16483 - 16527
Alignment:
Q  211 ttataagaatagaatagacataggagtttccaaaactccattgtt 255  Q
    ||||||| | |||| |||||| |||||||||||||||||||||||    
T  16483 ttataagtacagaacagacattggagtttccaaaactccattgtt 16527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 16699 - 16735
Alignment:
Q  416 tgattttataatatgttaggataatttaggttagaat 452  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  16699 tgattttatgatatgttaggatagtttaggttagaat 16735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 3965 - 4035
Alignment:
Q  210 gttataagaatagaatagacataggagtttccaaaactccattgttacgtttttggttttcctaggtgcga 280  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| || ||||  || || |||||||||    
T  3965 gttataagaacagaacagacataggagtttccaaaacttcattgttgcggttttcattctcttaggtgcga 4035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 154417 - 154368
Alignment:
Q  207 tctgttataagaatagaatag-acataggagtttccaaaactccattgtt 255  Q
    ||||||||||||| |||| || |||||||| |||||||||||||||||||    
T  154417 tctgttataagaacagaacagcacataggaatttccaaaactccattgtt 154368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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