View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12968_low_29 (Length: 317)

Name: NF12968_low_29
Description: NF12968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12968_low_29
NF12968_low_29
[»] chr8 (16 HSPs)
chr8 (89-303)||(36283954-36284167)
chr8 (13-81)||(23915212-23915280)
chr8 (13-81)||(21411743-21411811)
chr8 (13-81)||(21806235-21806303)
chr8 (13-81)||(21827254-21827322)
chr8 (17-81)||(25733492-25733556)
chr8 (13-81)||(18861885-18861953)
chr8 (13-81)||(21384464-21384532)
chr8 (13-81)||(21387884-21387952)
chr8 (13-64)||(19393046-19393097)
chr8 (13-64)||(22104403-22104454)
chr8 (13-64)||(16066532-16066583)
chr8 (13-81)||(42972859-42972931)
chr8 (13-81)||(4237646-4237715)
chr8 (13-81)||(4242385-4242454)
chr8 (13-81)||(8330668-8330737)
[»] chr5 (12 HSPs)
chr5 (89-230)||(40571712-40571852)
chr5 (13-81)||(10755460-10755528)
chr5 (13-81)||(36949505-36949573)
chr5 (13-64)||(1429481-1429532)
chr5 (13-64)||(21826951-21827002)
chr5 (13-64)||(26869629-26869680)
chr5 (13-81)||(24435489-24435557)
chr5 (13-81)||(15395142-15395211)
chr5 (13-77)||(8770968-8771032)
chr5 (13-81)||(557415-557484)
chr5 (13-81)||(36936816-36936885)
chr5 (13-81)||(36941570-36941639)
[»] chr1 (15 HSPs)
chr1 (89-230)||(19913218-19913358)
chr1 (13-81)||(1924369-1924437)
chr1 (13-81)||(16836600-16836668)
chr1 (13-81)||(20923383-20923451)
chr1 (13-81)||(41387281-41387349)
chr1 (13-79)||(39243329-39243395)
chr1 (13-79)||(39246884-39246950)
chr1 (8-64)||(14819700-14819756)
chr1 (16-77)||(19725215-19725276)
chr1 (13-64)||(26199086-26199137)
chr1 (35-81)||(1067201-1067247)
chr1 (13-81)||(13894036-13894103)
chr1 (13-64)||(14804232-14804283)
chr1 (13-81)||(3094809-3094878)
chr1 (16-64)||(23285148-23285197)
[»] scaffold0130 (1 HSPs)
scaffold0130 (89-240)||(18251-18402)
[»] scaffold0628 (1 HSPs)
scaffold0628 (13-81)||(7108-7176)
[»] scaffold0292 (1 HSPs)
scaffold0292 (13-81)||(7887-7955)
[»] scaffold0018 (1 HSPs)
scaffold0018 (13-81)||(22027-22095)
[»] chr4 (13 HSPs)
chr4 (13-81)||(15011122-15011190)
chr4 (13-81)||(10713660-10713728)
chr4 (13-81)||(10927430-10927498)
chr4 (13-81)||(12488518-12488586)
chr4 (13-81)||(14953370-14953438)
chr4 (13-81)||(25690705-25690773)
chr4 (13-64)||(15225893-15225944)
chr4 (29-81)||(8660725-8660777)
chr4 (13-64)||(9184999-9185050)
chr4 (20-80)||(43477306-43477366)
chr4 (13-64)||(9190864-9190915)
chr4 (13-64)||(26034916-26034967)
chr4 (13-81)||(13521290-13521359)
[»] chr3 (22 HSPs)
chr3 (13-81)||(22758486-22758554)
chr3 (13-81)||(8488697-8488765)
chr3 (13-81)||(9706897-9706965)
chr3 (13-81)||(16749226-16749294)
chr3 (13-81)||(19776605-19776673)
chr3 (13-81)||(37438866-37438934)
chr3 (13-81)||(4106641-4106709)
chr3 (13-81)||(4110493-4110561)
chr3 (13-81)||(15965766-15965834)
chr3 (13-81)||(15969690-15969758)
chr3 (13-81)||(15973614-15973682)
chr3 (13-81)||(14679991-14680059)
chr3 (13-81)||(6595699-6595767)
chr3 (13-64)||(14425158-14425209)
chr3 (13-81)||(16055896-16055964)
chr3 (13-79)||(16048716-16048782)
chr3 (13-64)||(11997290-11997341)
chr3 (13-81)||(3034363-3034432)
chr3 (13-81)||(8070399-8070468)
chr3 (13-81)||(8883890-8883959)
chr3 (13-81)||(8888650-8888719)
chr3 (13-81)||(53358826-53358894)
[»] scaffold0575 (2 HSPs)
scaffold0575 (13-81)||(2079-2147)
scaffold0575 (13-81)||(5187-5255)
[»] scaffold0011 (1 HSPs)
scaffold0011 (13-81)||(127123-127191)
[»] chr7 (24 HSPs)
chr7 (13-81)||(14927942-14928010)
chr7 (13-81)||(15351408-15351476)
chr7 (13-81)||(16580949-16581017)
chr7 (13-72)||(14259726-14259785)
chr7 (13-81)||(16459687-16459755)
chr7 (13-81)||(18426647-18426715)
chr7 (13-81)||(20485307-20485375)
chr7 (13-81)||(20488668-20488736)
chr7 (13-81)||(45169237-45169305)
chr7 (13-81)||(32302559-32302626)
chr7 (13-81)||(29727106-29727174)
chr7 (13-81)||(10499403-10499471)
chr7 (13-81)||(10504432-10504500)
chr7 (13-81)||(10532116-10532184)
chr7 (13-81)||(13343712-13343780)
chr7 (13-64)||(8954582-8954633)
chr7 (13-64)||(11017388-11017439)
chr7 (13-81)||(10488602-10488671)
chr7 (15-64)||(19096983-19097032)
chr7 (31-64)||(47552791-47552824)
chr7 (13-64)||(15565651-15565703)
chr7 (13-64)||(36477698-36477749)
chr7 (13-81)||(27256957-27257026)
chr7 (13-49)||(47552171-47552207)
[»] chr6 (17 HSPs)
chr6 (13-81)||(15704217-15704285)
chr6 (13-81)||(22807071-22807139)
chr6 (17-81)||(2077532-2077596)
chr6 (13-81)||(14322716-14322784)
chr6 (13-81)||(16761103-16761171)
chr6 (13-81)||(27324367-27324435)
chr6 (13-81)||(22949943-22950011)
chr6 (13-81)||(22953899-22953967)
chr6 (13-81)||(23872387-23872455)
chr6 (13-81)||(23876343-23876411)
chr6 (13-64)||(2759472-2759523)
chr6 (13-64)||(16625144-16625195)
chr6 (13-81)||(31477012-31477078)
chr6 (13-64)||(26981323-26981374)
chr6 (13-64)||(2759659-2759710)
chr6 (13-64)||(15990979-15991029)
chr6 (20-81)||(28964135-28964197)
[»] scaffold0572 (1 HSPs)
scaffold0572 (13-81)||(10282-10350)
[»] scaffold0431 (1 HSPs)
scaffold0431 (13-81)||(14783-14851)
[»] scaffold0144 (1 HSPs)
scaffold0144 (13-81)||(7597-7665)
[»] scaffold0035 (1 HSPs)
scaffold0035 (17-81)||(6827-6891)
[»] chr2 (13 HSPs)
chr2 (17-81)||(9785868-9785932)
chr2 (15-81)||(1284234-1284300)
chr2 (13-81)||(30344231-30344299)
chr2 (15-81)||(22845122-22845188)
chr2 (13-64)||(17452892-17452943)
chr2 (13-64)||(377605-377656)
chr2 (13-64)||(6856925-6856976)
chr2 (29-64)||(30635556-30635591)
chr2 (44-81)||(23068090-23068127)
chr2 (13-81)||(30658891-30658960)
chr2 (13-77)||(7559656-7559720)
chr2 (13-64)||(10160024-10160076)
chr2 (25-81)||(25375609-25375665)
[»] scaffold0157 (1 HSPs)
scaffold0157 (13-81)||(31891-31959)
[»] scaffold0141 (1 HSPs)
scaffold0141 (13-81)||(13318-13386)
[»] scaffold0124 (1 HSPs)
scaffold0124 (20-81)||(21299-21360)
[»] scaffold0229 (1 HSPs)
scaffold0229 (13-81)||(10732-10800)
[»] scaffold0415 (1 HSPs)
scaffold0415 (20-81)||(1199-1260)
[»] scaffold0031 (1 HSPs)
scaffold0031 (20-81)||(35324-35385)
[»] scaffold0132 (1 HSPs)
scaffold0132 (13-64)||(24611-24662)
[»] scaffold0019 (1 HSPs)
scaffold0019 (13-64)||(30412-30463)
[»] scaffold0009 (1 HSPs)
scaffold0009 (13-81)||(71875-71943)
[»] scaffold1910 (1 HSPs)
scaffold1910 (13-64)||(594-645)
[»] scaffold0327 (1 HSPs)
scaffold0327 (13-64)||(19537-19588)
[»] scaffold0041 (1 HSPs)
scaffold0041 (13-81)||(35009-35078)
[»] scaffold0004 (1 HSPs)
scaffold0004 (13-64)||(199918-199969)
[»] scaffold0034 (1 HSPs)
scaffold0034 (47-81)||(121286-121320)
[»] scaffold0045 (1 HSPs)
scaffold0045 (13-54)||(83670-83711)
[»] scaffold0205 (1 HSPs)
scaffold0205 (36-64)||(30995-31023)
[»] scaffold0008 (1 HSPs)
scaffold0008 (13-81)||(256555-256623)


Alignment Details
Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 89 - 303
Target Start/End: Complemental strand, 36284167 - 36283954
Alignment:
Q  89 gatcaattttgttttcttgctttctcaatttattatcaaagtgaactagaattttctaaaaatctataagcctctaataatagttttagtaaattgctca 188  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||    
T  36284167 gatcaattttgttttcttgctttctcaatttattatcaaagtaaactagaattttctaaaaatctataagcctctattcatagttttaataaatttctca 36284068  T
Q  189 acaattgtttggtacttgagcagcagcctttgtcactctttgatccttttttaatagatccatatctagttggaaattgcttactaaaagtactaatttg 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36284067 acaattgtttggtacttgagcagcagcctttgtcactctttgatcct-ttttaatagatccatatctagttggaaattgcttactaaaagtgctaatttg 36283969  T
Q  289 attgaatattattat 303  Q
    | | |||||||||||    
T  36283968 aataaatattattat 36283954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 23915280 - 23915212
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23915280 aatatatttttgtacttaatataatatattttggtactcaattgagatatttaagtactagatctaata 23915212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 21411811 - 21411743
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  21411811 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 21411743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 21806303 - 21806235
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  21806303 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 21806235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 21827254 - 21827322
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  21827254 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 21827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 25733492 - 25733556
Alignment:
Q  17 tatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  25733492 tatttttgtacttaatataatatattttagtactcaattgagatatttaagtactagatctaata 25733556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 18861885 - 18861953
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  18861885 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 18861953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 21384532 - 21384464
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  21384532 aatatatttttgtacctaatataatatattttggtactcaattgatatatttaattactagatctaata 21384464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 21387952 - 21387884
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  21387952 aatatatttttgtacctaatataatatattttggtactcaattgatatatttaattactagatctaata 21387884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 19393046 - 19393097
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  19393046 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 19393097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 22104454 - 22104403
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  22104454 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 22104403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 16066532 - 16066583
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||| |||||||    
T  16066532 aatatatttttgtactcaatataatatattttagtactcaattgggatattt 16066583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 42972931 - 42972859
Alignment:
Q  13 aatatatttttatacttaatataata----tattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||||||||| |||| ||||||||||    ||||||||||||||||||||||||||  |||||  ||||||||    
T  42972931 aatatattttgatacataatataatagatatattttggtactcaattgagatatttttgtacttgatctaata 42972859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 4237646 - 4237715
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  4237646 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 4237715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 4242385 - 4242454
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  4242385 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 4242454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 8330668 - 8330737
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaatt-gagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||  ||||||||||  |||||||| |||||||||  |||||||||||||||    
T  8330668 aatatatttttgtactcaataagatatattttgagactcaatttgagatatttttgtactatatctaata 8330737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 8e-58; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 40571852 - 40571712
Alignment:
Q  89 gatcaattttgttttcttgctttctcaatttattatcaaagtgaactagaattttctaaaaatctataagcctctaataatagttttagtaaattgctca 188  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  40571852 gatcaattttgttttcttgctttctcaatttattatcaaagtaaacta-aattttctaaaaatctataagcctctattaatagttttaataaatttctca 40571754  T
Q  189 acaattgtttggtacttgagcagcagcctttgtcactctttg 230  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  40571753 ataattgtttggtacttgagcagcagcctttgtcactctttg 40571712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 10755528 - 10755460
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  10755528 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 10755460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 36949573 - 36949505
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| |||| ||||||||||||||||||||| ||||||||  |||||| ||||||||    
T  36949573 aatatatttttgtactcaataaaatatattttggtactcaattaagatatttttgtactagatctaata 36949505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 1429481 - 1429532
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  1429481 aatatatttttgtattcaatataatatattttggtactcaattgagatattt 1429532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 21827002 - 21826951
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  21827002 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 21826951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 26869629 - 26869680
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  26869629 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 26869680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 24435489 - 24435557
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||||||| || | || ||||||| |||||||||||||||||||||||||||  |||||| ||||||||    
T  24435489 aatatattattgtcctcaatataacatattttggtactcaattgagatatttttgtactagatctaata 24435557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 15395142 - 15395211
Alignment:
Q  13 aatatatttttatacttaatataatatattt-tggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||||||||||||  ||||||||||||||||||||  ||| || ||||||||    
T  15395142 aatatatttttgtactcaatataatatatttcgggtactcaattgagatatttttgtagtagatctaata 15395211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 8771032 - 8770968
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatct 77  Q
    ||||||||||| |||||||||| ||||||||| |||| ||||||| ||||||  |||||| ||||    
T  8771032 aatatatttttgtacttaatatgatatatttttgtacacaattgaaatatttttgtactagatct 8770968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 557484 - 557415
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  557484 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 557415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 36936816 - 36936885
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  36936816 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 36936885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 36941570 - 36941639
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  36941570 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 36941639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 8e-58; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 19913358 - 19913218
Alignment:
Q  89 gatcaattttgttttcttgctttctcaatttattatcaaagtgaactagaattttctaaaaatctataagcctctaataatagttttagtaaattgctca 188  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  19913358 gatcaattttgttttcttgctttctcaatttattatcaaagtaaacta-aattttctaaaaatctataagcctctattaatagttttaataaatttctca 19913260  T
Q  189 acaattgtttggtacttgagcagcagcctttgtcactctttg 230  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  19913259 ataattgtttggtacttgagcagcagcctttgtcactctttg 19913218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 1924369 - 1924437
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  1924369 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 1924437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 16836600 - 16836668
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  16836600 aatatatttttctactcaatataatatattttggtactcaattgagatatttttgtattatatctaata 16836668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 20923383 - 20923451
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  20923383 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 20923451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 41387281 - 41387349
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  41387281 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 41387349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 39243329 - 39243395
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaa 79  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||    
T  39243329 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaa 39243395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 39246884 - 39246950
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaa 79  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||    
T  39246884 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaa 39246950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 14819756 - 14819700
Alignment:
Q  8 cgaacaatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    |||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  14819756 cgaataatatatttttatactcaatatgatatattttggtactcaattgagatattt 14819700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 19725215 - 19725276
Alignment:
Q  16 atatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatct 77  Q
    |||||||| |||| ||||| |||||||||||||| ||||||||||||||  |||||||||||    
T  19725215 atatttttgtactcaatatgatatattttggtacacaattgagatatttttgtactatatct 19725276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 26199137 - 26199086
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||| | |||| ||||| |||||||||||||||||||||||||||||    
T  26199137 aatatatttctgtactcaatatgatatattttggtactcaattgagatattt 26199086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 1067247 - 1067201
Alignment:
Q  35 aatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||||    
T  1067247 aatatattttggtactcaattgagatattttggtactagatctaata 1067201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 13894103 - 13894036
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||||||||||||||||||| || |||||| |||  |||||| ||||||||    
T  13894103 aatatatttttgtactcaatataatatattttggtact-aactgagatgtttttgtactagatctaata 13894036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 14804283 - 14804232
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| | |||||||||||||||||||| ||||||    
T  14804283 aatatatttttgtactcaatatgaaatattttggtactcaattgaaatattt 14804232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 3094878 - 3094809
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  3094878 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 3094809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 23285148 - 23285197
Alignment:
Q  16 atatttttatacttaatataatatattttggtactcaa-ttgagatattt 64  Q
    |||||||| |||| ||||| |||||||||||||||||| |||||||||||    
T  23285148 atatttttgtactcaatatgatatattttggtactcaatttgagatattt 23285197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 89 - 240
Target Start/End: Complemental strand, 18402 - 18251
Alignment:
Q  89 gatcaattttgttttcttgctttctcaatttattatcaaagtgaactagaattttctaaaaatctataagcctctaataatagttttagtaaattgctca 188  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| | |||||||||    
T  18402 gatcaattttgttttcctactttctcaatttattatcaaagtaaactagaattttctaaaaatctataagcctctattactagttttaatgaattgctca 18303  T
Q  189 acaattgtttggtacttgagcagcagcctttgtcactctttgatcctttttt 240  Q
    |||||||||||||||||||||||  |||||| |||||||||| |||||||||    
T  18302 acaattgtttggtacttgagcagtcgcctttttcactctttgttcctttttt 18251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 7176 - 7108
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7176 aatatatttttgtacttaatataatatattttggtactcaattgagatatttaagtactagatctaata 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 7955 - 7887
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7955 aatatatttttgtacttaatataatatattttggtactcaattgagatatttaagtactaaatctaata 7887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 22095 - 22027
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22095 aatatatttttgtacttaatataatatattttggtactcaattgagatatttaagtactagatctaata 22027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 15011122 - 15011190
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15011122 aatatatttttgtacttaatataatatattttggtactcaattgagatatttaagtactagatctaata 15011190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 10713728 - 10713660
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  10713728 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 10713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 10927498 - 10927430
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  10927498 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 10927430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 12488586 - 12488518
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||    
T  12488586 aatatatttttgtacttaatataatatatttttgtactcaattgatatatttaattactagatctaata 12488518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 14953370 - 14953438
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  14953370 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 14953438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 25690773 - 25690705
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  25690773 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 25690705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 15225944 - 15225893
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  15225944 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 15225893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 8660725 - 8660777
Alignment:
Q  29 taatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||||||||||||||| |||||||||||||||||||  |||||| ||||||||    
T  8660725 taatataatatatttttgtactcaattgagatatttttgtactagatctaata 8660777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 9184999 - 9185050
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||  |||| ||||| |||||||||||||||||||||||||||||    
T  9184999 aatatattttcgtactcaatatgatatattttggtactcaattgagatattt 9185050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 43477306 - 43477366
Alignment:
Q  20 ttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaat 80  Q
    |||| |||| |||||| |||||||||||| |||||||||||||||  |||||| |||||||    
T  43477306 ttttgtactcaatatagtatattttggtattcaattgagatatttttgtactagatctaat 43477366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 9190864 - 9190915
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||  |||| ||||| ||| |||||||||||||||||||||||||    
T  9190864 aatatattttcgtactcaatatgatacattttggtactcaattgagatattt 9190915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 26034967 - 26034916
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||| ||||||    
T  26034967 aatatatttttatactcaatatgatatattttggtagacaattgacatattt 26034916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 13521290 - 13521359
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  13521290 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 13521359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 22758486 - 22758554
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22758486 aatatatttttgtacttaatataatatattttggtactcaattgagatatttaagtactagatctaata 22758554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 8488697 - 8488765
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  8488697 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 8488765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 9706897 - 9706965
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  9706897 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 9706965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 16749226 - 16749294
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  16749226 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 16749294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 19776673 - 19776605
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  19776673 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 19776605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 37438866 - 37438934
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  37438866 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 37438934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 4106641 - 4106709
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  4106641 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 4106709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 4110493 - 4110561
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  4110493 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 4110561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 15965834 - 15965766
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  15965834 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 15965766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 15969758 - 15969690
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  15969758 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 15969690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 15973682 - 15973614
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  15973682 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 15973614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 14680059 - 14679991
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||||||    
T  14680059 aatatatttttgtacttaatataataaattttgatactcaattgatatatttaattactagatctaata 14679991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 6595699 - 6595767
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| ||||||||  |||||| ||||||||    
T  6595699 aatatatttttgtactcaatataatatatttttgtactcaattaagatatttttgtactagatctaata 6595767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 14425158 - 14425209
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  14425158 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 14425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 16055964 - 16055896
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||||||| || | |||||||||| |||||||||||||||||| ||||||||  |||||| ||||||||    
T  16055964 aatatattattgtccttaatataacatattttggtactcaattaagatatttttgtactagatctaata 16055896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 16048782 - 16048716
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaa 79  Q
    |||||||| || | |||||||||| |||||||||||||||||| ||||||||  |||||| ||||||    
T  16048782 aatatattattgttcttaatataacatattttggtactcaattaagatatttttgtactagatctaa 16048716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 11997290 - 11997341
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| ||||||||| |||| ||||||||||||||    
T  11997290 aatatatttttgtactcaatatgatatattttcgtacacaattgagatattt 11997341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 3034432 - 3034363
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  3034432 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 3034363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 8070468 - 8070399
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  8070468 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 8070399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 8883959 - 8883890
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  8883959 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 8883890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 8888719 - 8888650
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  8888719 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 8888650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 53358894 - 53358826
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||| ||||| |||  ||||||||||||||||||||||| |||| ||||||  |||||  ||||||||    
T  53358894 aatatgtttttgtacgcaatataatatattttggtactcagttgaaatatttttgtacttgatctaata 53358826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 2079 - 2147
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  2079 aatatatttttgtacttaatataatatattttagtactcaattgagatatttaagtactagatctaata 2147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 5187 - 5255
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  5187 aatatatttttgtacttaatataatataatttagtactcaattgagatatttaagtactagatctaata 5255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 127191 - 127123
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  127191 aatatatttttgtacttaatataatatattttggcactcaattgagatatttaagtactagatctaata 127123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 8e-24; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 14927942 - 14928010
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  14927942 aatatatttttgtacttaatataatatattttggtactcaattgagatattttagtactagatctaata 14928010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 15351408 - 15351476
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  15351408 aatatatttttgtacttaatataatatattttggtactcaattgagatattttagtactagatctaata 15351476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 16581017 - 16580949
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  16581017 aatatatttttgtacttaatataatatattttagtactcaattgagatatttaagtactagatctaata 16580949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 14259785 - 14259726
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtacta 72  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14259785 aatatatttttgtacttaatataatatattttggtactcaattgagatatttaagtacta 14259726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 16459687 - 16459755
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  16459687 aatatatttttgtacctaatataatatattttggtactcaattgagatacttaagtactagatctaata 16459755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 18426715 - 18426647
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  18426715 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 18426647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 20485375 - 20485307
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  20485375 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 20485307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 20488736 - 20488668
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  20488736 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 20488668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 45169237 - 45169305
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  45169237 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 45169305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 32302626 - 32302559
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  32302626 aatatatttttgtacttaatataatatattttggtactc-attgagatatttaagtactggatctaata 32302559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 29727106 - 29727174
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| ||||||  |||||||| ||||||    
T  29727106 aatatatttttgtactcaatataatatattttggtactcaattgaaatatttttgtactatacctaata 29727174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 10499403 - 10499471
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| || |||||||||||||||||| |||||||||||||  |||||| ||||||||    
T  10499403 aatatatttttttactcaacataatatattttggtacttaattgagatatttttgtactaaatctaata 10499471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 10504432 - 10504500
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| || |||||||||||||||||| |||||||||||||  |||||| ||||||||    
T  10504432 aatatatttttttactcaacataatatattttggtacttaattgagatatttttgtactaaatctaata 10504500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 10532116 - 10532184
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||||| |||| |||| || |||||||||||||||||| |||||||||||||  |||||| ||||||||    
T  10532116 aatatagttttttactcaacataatatattttggtacttaattgagatatttttgtactagatctaata 10532184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 13343712 - 13343780
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||| |||||| |||| || |||||||||||||||||| |||||||||||||  |||||| ||||||||    
T  13343712 aatagatttttttactcaacataatatattttggtacttaattgagatatttttgtactagatctaata 13343780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 8954582 - 8954633
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||| ||||||    
T  8954582 aatatatttttgtactcaatatgatatattttggtactcaattgacatattt 8954633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 11017388 - 11017439
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||  |||| ||||||||||||||| |||||||||||||||||||    
T  11017388 aatatattttggtactcaatataatatattttagtactcaattgagatattt 11017439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 10488602 - 10488671
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| |||||||||||||||||| |||||||||||   ||||| ||||||||    
T  10488602 aatatatttttgtactcaatatgatatattttggtactcaatttgagatatttttctactaaatctaata 10488671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 19097032 - 19096983
Alignment:
Q  15 tatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||| |||| ||||| |||||||||| ||||||||||||||||||    
T  19097032 tatatttttgtactcaatatgatatattttgatactcaattgagatattt 19096983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 47552791 - 47552824
Alignment:
Q  31 atataatatattttggtactcaattgagatattt 64  Q
    ||||||||||||||||||||||||||||||||||    
T  47552791 atataatatattttggtactcaattgagatattt 47552824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 15565703 - 15565651
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatattt 64  Q
    ||||||||||| | |||||||| |||||||||||||||||| |||||||||||    
T  15565703 aatatatttttgttcttaatatgatatattttggtactcaatttgagatattt 15565651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 36477749 - 36477698
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||| |||||| |||||||    
T  36477749 aatatatttttgtactcaatatgatatattttggtacacaattgtgatattt 36477698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 27257026 - 27256957
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  27257026 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 27256957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 47552171 - 47552207
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtac 49  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  47552171 aatatatttttgtacttaatataatatatcttggtac 47552207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 15704217 - 15704285
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15704217 aatatatttttgtatttaatataatatattttggtactcaattgagatatttaagtactagatctaata 15704285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 22807139 - 22807071
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22807139 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaagtactagatctaata 22807071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 2077596 - 2077532
Alignment:
Q  17 tatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  2077596 tatttttgtacttaatataatatattttagtactcaattgagatatttaagtactaaatctaata 2077532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 14322716 - 14322784
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  14322716 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 14322784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 16761171 - 16761103
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  16761171 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 16761103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 27324367 - 27324435
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  27324367 aatatatttttttacttaatataatatattttggtactcaattgacatatttaattactagatctaata 27324435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 22950011 - 22949943
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  22950011 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 22949943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 22953967 - 22953899
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  22953967 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 22953899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 23872455 - 23872387
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  23872455 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 23872387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 23876411 - 23876343
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  23876411 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 23876343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 2759472 - 2759523
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  2759472 aatatatttttttactcaatataatatattttggtactcaattgagatattt 2759523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 16625195 - 16625144
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  16625195 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 16625144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 31477012 - 31477078
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||  |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  31477012 aatatatttttgtactgaata--atatattttggtactcaattgatatatttaattactagatctaata 31477078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 26981374 - 26981323
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| ||||||||| |||||||||||||||||||    
T  26981374 aatatatttttgtactcaatatgatatattttagtactcaattgagatattt 26981323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 2759659 - 2759710
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||| ||| |||| |||| |||||||||||||| |||||||||||||||    
T  2759659 aatatatatttttactcaataaaatatattttggtattcaattgagatattt 2759710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 15990979 - 15991029
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| |||||||||||||||  ||||||||||||||||||    
T  15990979 aatatattttt-tactcaatataatatattttattactcaattgagatattt 15991029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 28964135 - 28964197
Alignment:
Q  20 ttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    |||| |||| ||||| |||||||||||||||||| |||||||||||  |||||| ||||||||    
T  28964135 ttttgtactcaatatgatatattttggtactcaatttgagatatttttgtactagatctaata 28964197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 10282 - 10350
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  10282 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 10350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 14783 - 14851
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  14783 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 14851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 7665 - 7597
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  7665 aatatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 7597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 6827 - 6891
Alignment:
Q  17 tatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  6827 tatttttgtacttaatataatatattttagtactcaattgagatatttaagtactagatctaata 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 9785932 - 9785868
Alignment:
Q  17 tatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  9785932 tatttttgtacttaatataatatattttagtactcaattgagatatttaagtactagatctaata 9785868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 1284300 - 1284234
Alignment:
Q  15 tatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  1284300 tatatttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 1284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 30344231 - 30344299
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  30344231 aatatatttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 30344299  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 22845188 - 22845122
Alignment:
Q  15 tatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  22845188 tatatttttgtactcaatataatatattttggtactcaattgagatatttttgtactagatctaata 22845122  T

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Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 17452892 - 17452943
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  17452892 aatatatttttctactcaatataatatattttggtactcaattgagatattt 17452943  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 377605 - 377656
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||||||||| ||| |||||||||||||||||||    
T  377605 aatatatttttgtactcaatataatatactttagtactcaattgagatattt 377656  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 6856976 - 6856925
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||||||| | ||||||||| |||||||||||||||||||    
T  6856976 aatatatttttgtacttaatgtgatatattttagtactcaattgagatattt 6856925  T

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Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 30635591 - 30635556
Alignment:
Q  29 taatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  30635591 taatataatatattttggtactcaattgagatattt 30635556  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 23068090 - 23068127
Alignment:
Q  44 tggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  23068090 tggtactcaattgagatatttaagtactagatctaata 23068127  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 30658960 - 30658891
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    |||||||||||||||| ||||| ||||||||||  |||||| |||||||||||  |||||| ||||||||    
T  30658960 aatatatttttatactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaata 30658891  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 7559656 - 7559720
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatct 77  Q
    ||||||||||| |||| ||||| |||||||||||||| ||||||| ||||||  |||||| ||||    
T  7559656 aatatatttttgtactcaatatgatatattttggtacacaattgaaatatttttgtactagatct 7559720  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 10160024 - 10160076
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatattt 64  Q
    |||||||||||||||| ||||| ||||||||||  |||||| |||||||||||    
T  10160024 aatatatttttatactcaatatgatatattttgagactcaatttgagatattt 10160076  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 25375665 - 25375609
Alignment:
Q  25 tacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||| ||||||||| |||||||||||||| |||||||| |  |||||| ||||||||    
T  25375665 tactcaatataatagattttggtactcaactgagatatatttgtactagatctaata 25375609  T

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Target: scaffold0157 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 31891 - 31959
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||    
T  31891 aatatatttttgtacttaatataatatatttttgtactcaattgatatatttaattactagatctaata 31959  T

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Target: scaffold0141 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 13318 - 13386
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||    
T  13318 aatatatttttgtacttaatataatatattttagtactcaattgatatatttaattactagatctaata 13386  T

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Target: scaffold0124 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 21299 - 21360
Alignment:
Q  20 ttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  21299 ttttgtacttaatataatatattttggtactcaattgatatatttaattactagatctaata 21360  T

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Target: scaffold0229 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 10732 - 10800
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||| |||||||| ||||| ||||||||    
T  10732 aatatatttttgtacttaatatgatatattatggtactcaattgatatatttaattactagatctaata 10800  T

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Target: scaffold0415 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 1260 - 1199
Alignment:
Q  20 ttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  1260 ttttgtacttaatatgatatattttggtactcaattgatatatttaattactagatctaata 1199  T

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Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 35324 - 35385
Alignment:
Q  20 ttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||| |||||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||    
T  35324 ttttgtacttaatataatatattttggtacttaattgatatatttaattactagatctaata 35385  T

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Target: scaffold0132 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 24611 - 24662
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  24611 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 24662  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 30463 - 30412
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  30463 aatatatttttgtactcaatatgatatattttggtactcaattgagatattt 30412  T

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Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 71943 - 71875
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    ||||||||||  ||| ||| ||||||||||||||||||||||||||||||||  |||||| | ||||||    
T  71943 aatatattttggtacataaaataatatattttggtactcaattgagatatttttgtactagagctaata 71875  T

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Target: scaffold1910 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 645 - 594
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||| |||||||    
T  645 aatatatttttgtactcaatataatatattttagtactcaattgggatattt 594  T

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Target: scaffold0327 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 19537 - 19588
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||| ||||||||| |||||||||||||||||||    
T  19537 aatatatttttgtactcaatatgatatattttagtactcaattgagatattt 19588  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 35009 - 35078
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaa-ttgagatatttaagtactatatctaata 81  Q
    ||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||  |||||||||||||||    
T  35009 aatatatttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactatatctaata 35078  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 199969 - 199918
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatattt 64  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||  |||||||    
T  199969 aatatatttttgtactcaatataatatattttagtactcaattaggatattt 199918  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 121320 - 121286
Alignment:
Q  47 tactcaattgagatatttaagtactatatctaata 81  Q
    |||||||||||||||||||||||||| ||||||||    
T  121320 tactcaattgagatatttaagtactagatctaata 121286  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 83711 - 83670
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaat 54  Q
    ||||||||||| |||| |||||||||||||||| ||||||||    
T  83711 aatatatttttgtactcaatataatatattttgatactcaat 83670  T

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Target: scaffold0205 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 31023 - 30995
Alignment:
Q  36 atatattttggtactcaattgagatattt 64  Q
    |||||||||||||||||||||||||||||    
T  31023 atatattttggtactcaattgagatattt 30995  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 256623 - 256555
Alignment:
Q  13 aatatatttttatacttaatataatatattttggtactcaattgagatatttaagtactatatctaata 81  Q
    |||| |||||| |||| ||||||||||||||| | |||||||||| ||||||  ||| || ||||||||    
T  256623 aatacatttttgtactcaatataatatattttcgcactcaattgaaatatttttgtattagatctaata 256555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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