View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12972_low_5 (Length: 286)
Name: NF12972_low_5
Description: NF12972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12972_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 17411001 - 17410930
Alignment:
| Q |
73 |
caactatggcttgggtgatattgatgaagaagatgacaatgaagatgtcaacaatccaaaaaagagggtataatc |
147 |
Q |
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| T |
17411001 |
caactatggcttggatgat---gatgaagaagatgacaatgaagatgtcaacaatccaaaaaagagggtataatc |
17410930 |
T |
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