View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12973_high_8 (Length: 328)
Name: NF12973_high_8
Description: NF12973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12973_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 6910204 - 6910510
Alignment:
| Q |
1 |
aaaattttatctcaccaccaaacatagcctnnnnnnngataatgaaaaaggaaccgagtaccttagtaatggaaatttcatcatcaggaacaagtgttct |
100 |
Q |
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| T |
6910204 |
aaaattttatctcaccaccaaacatagcctaaaaaaagataatgaaaaaggaaccgagtaccttagtaatggaaatttcatcatcaggaacaagtgttct |
6910303 |
T |
|
| Q |
101 |
actatcaataggaacatcagaagaagactgagaagcagtagtagttgaagaatcagctgctcttactggaacaaaactaaacctattgcttttgaagaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
6910304 |
actatcaataggaacatcagaagaagactgagaagcagtagtagttgaagaatcagcagctcttactggaacaaaactaaacctattgcttttgaagaaa |
6910403 |
T |
|
| Q |
201 |
agcttagcatgaaaacatgaaatggattgaggatgaacagaaacaagtggagactttgtgagttgaagaggaggtagacagtggaaccggtgaccggagg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6910404 |
agcttagcatgaaaacatgaaatggattgaggatgaacagaaacaagtggagactttgtgagttgaagaggaggtagacagtggaaccggtgaccggagg |
6910503 |
T |
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| Q |
301 |
aggagga |
307 |
Q |
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||||||| |
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| T |
6910504 |
aggagga |
6910510 |
T |
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