View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12977_high_9 (Length: 534)

Name: NF12977_high_9
Description: NF12977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12977_high_9
NF12977_high_9
[»] chr4 (34 HSPs)
chr4 (163-451)||(18482839-18483124)
chr4 (18-220)||(16595487-16595689)
chr4 (18-217)||(55081223-55081422)
chr4 (170-374)||(12613677-12613883)
chr4 (18-243)||(20513481-20513708)
chr4 (53-247)||(40684352-40684548)
chr4 (160-283)||(8816966-8817091)
chr4 (160-320)||(20548825-20548987)
chr4 (160-318)||(19737463-19737623)
chr4 (18-212)||(15019995-15020189)
chr4 (18-129)||(33722533-33722644)
chr4 (160-283)||(3381894-3382018)
chr4 (160-283)||(39744880-39745004)
chr4 (160-283)||(3388640-3388764)
chr4 (160-283)||(50188277-50188401)
chr4 (160-318)||(55792688-55792847)
chr4 (160-283)||(38853846-38853970)
chr4 (161-283)||(8093734-8093858)
chr4 (161-283)||(8102539-8102663)
chr4 (160-220)||(33722427-33722487)
chr4 (160-243)||(2574831-2574916)
chr4 (21-248)||(39991419-39991645)
chr4 (201-283)||(8657982-8658066)
chr4 (49-152)||(37259397-37259499)
chr4 (37-152)||(19540712-19540826)
chr4 (49-152)||(37264097-37264199)
chr4 (49-152)||(31269486-31269587)
chr4 (49-152)||(31273975-31274076)
chr4 (49-136)||(5270970-5271057)
chr4 (55-152)||(51698387-51698483)
chr4 (55-102)||(16421507-16421554)
chr4 (49-136)||(31728938-31729025)
chr4 (25-102)||(5927798-5927874)
chr4 (34-103)||(13065382-13065451)
[»] chr6 (36 HSPs)
chr6 (18-248)||(14042018-14042250)
chr6 (18-217)||(35130001-35130199)
chr6 (160-283)||(19899441-19899565)
chr6 (160-283)||(25505983-25506107)
chr6 (17-220)||(32814589-32814792)
chr6 (160-283)||(19720329-19720453)
chr6 (163-318)||(22764329-22764485)
chr6 (160-320)||(18909535-18909695)
chr6 (160-318)||(22232062-22232222)
chr6 (123-283)||(28969497-28969659)
chr6 (163-318)||(22778578-22778734)
chr6 (160-276)||(10984528-10984645)
chr6 (160-276)||(20458919-20459036)
chr6 (160-283)||(20452102-20452226)
chr6 (160-318)||(26896900-26897060)
chr6 (160-283)||(28702341-28702465)
chr6 (161-283)||(30823980-30824104)
chr6 (18-101)||(5496241-5496324)
chr6 (62-248)||(14775961-14776149)
chr6 (161-283)||(35091120-35091244)
chr6 (160-320)||(12666991-12667151)
chr6 (160-281)||(3917045-3917171)
chr6 (200-283)||(19714173-19714258)
chr6 (49-152)||(16835691-16835793)
chr6 (170-275)||(29600896-29601002)
chr6 (57-149)||(29610529-29610621)
chr6 (57-152)||(17914056-17914150)
chr6 (169-283)||(28002329-28002447)
chr6 (62-152)||(4156887-4156976)
chr6 (37-152)||(11570277-11570392)
chr6 (62-104)||(22610019-22610061)
chr6 (55-152)||(17964090-17964185)
chr6 (160-220)||(7245022-7245081)
chr6 (62-102)||(11534289-11534329)
chr6 (62-102)||(11559799-11559839)
chr6 (56-152)||(12689442-12689536)
[»] chr1 (33 HSPs)
chr1 (18-248)||(36725082-36725314)
chr1 (18-220)||(19309128-19309329)
chr1 (18-248)||(33380417-33380649)
chr1 (18-245)||(12906527-12906745)
chr1 (18-243)||(31064330-31064557)
chr1 (18-220)||(27761359-27761560)
chr1 (18-248)||(2493310-2493542)
chr1 (18-249)||(25661343-25661566)
chr1 (18-244)||(24159307-24159541)
chr1 (18-220)||(28857579-28857783)
chr1 (25-248)||(9352799-9353024)
chr1 (18-215)||(9252707-9252904)
chr1 (160-318)||(44832005-44832165)
chr1 (164-283)||(47108861-47108981)
chr1 (160-283)||(2416156-2416280)
chr1 (18-216)||(23191544-23191742)
chr1 (161-318)||(51968381-51968541)
chr1 (25-247)||(9327954-9328178)
chr1 (160-276)||(15473319-15473436)
chr1 (160-283)||(20429845-20429970)
chr1 (160-283)||(19367951-19368075)
chr1 (161-283)||(3432354-3432476)
chr1 (113-217)||(8770074-8770178)
chr1 (161-283)||(31540455-31540579)
chr1 (161-283)||(31549024-31549148)
chr1 (49-152)||(25844213-25844316)
chr1 (49-136)||(10140555-10140642)
chr1 (57-136)||(38621175-38621254)
chr1 (49-102)||(10135787-10135840)
chr1 (55-152)||(16833940-16834036)
chr1 (25-102)||(39200343-39200420)
chr1 (38-152)||(16649167-16649279)
chr1 (55-152)||(3094532-3094628)
[»] scaffold0226 (1 HSPs)
scaffold0226 (62-339)||(5660-5939)
[»] chr3 (52 HSPs)
chr3 (18-244)||(48431795-48432023)
chr3 (18-220)||(4662539-4662741)
chr3 (57-244)||(16983375-16983564)
chr3 (160-320)||(14892582-14892744)
chr3 (160-318)||(13105095-13105255)
chr3 (160-318)||(14880767-14880927)
chr3 (160-283)||(21638014-21638138)
chr3 (160-283)||(261842-261966)
chr3 (160-318)||(8606609-8606769)
chr3 (162-318)||(48060187-48060345)
chr3 (160-318)||(4313048-4313207)
chr3 (160-318)||(11181218-11181376)
chr3 (160-318)||(8613070-8613230)
chr3 (160-283)||(13111252-13111376)
chr3 (160-283)||(23287583-23287707)
chr3 (160-283)||(68638-68762)
chr3 (160-283)||(74731-74855)
chr3 (160-283)||(9524871-9524995)
chr3 (161-283)||(8154098-8154222)
chr3 (160-318)||(37468475-37468635)
chr3 (160-283)||(9554546-9554671)
chr3 (160-283)||(16030771-16030895)
chr3 (160-339)||(44362982-44363162)
chr3 (163-283)||(17934557-17934677)
chr3 (162-283)||(26386165-26386287)
chr3 (176-283)||(14887501-14887608)
chr3 (115-220)||(48435405-48435508)
chr3 (163-267)||(16815311-16815415)
chr3 (61-248)||(14397945-14398131)
chr3 (161-283)||(41015838-41015962)
chr3 (18-76)||(48435494-48435552)
chr3 (161-283)||(41007058-41007183)
chr3 (161-265)||(12558353-12558458)
chr3 (38-152)||(757897-758011)
chr3 (49-152)||(23660997-23661099)
chr3 (49-152)||(23665656-23665758)
chr3 (49-152)||(24037904-24038006)
chr3 (177-283)||(35491520-35491630)
chr3 (55-152)||(8883613-8883709)
chr3 (38-136)||(18467676-18467773)
chr3 (38-136)||(29350691-29350788)
chr3 (55-152)||(3034086-3034182)
chr3 (55-152)||(3693061-3693157)
chr3 (57-152)||(7570749-7570844)
chr3 (55-152)||(8070121-8070217)
chr3 (55-136)||(8888373-8888454)
chr3 (49-102)||(14438280-14438333)
chr3 (49-102)||(27709391-27709444)
chr3 (57-152)||(3673031-3673125)
chr3 (34-104)||(20168816-20168886)
chr3 (62-152)||(39775259-39775347)
chr3 (64-104)||(35456541-35456581)
[»] chr8 (25 HSPs)
chr8 (18-243)||(19950193-19950420)
chr8 (18-244)||(2470350-2470579)
chr8 (18-244)||(4543787-4544013)
chr8 (18-244)||(19954647-19954875)
chr8 (160-318)||(32007186-32007346)
chr8 (160-283)||(39837023-39837147)
chr8 (160-283)||(32025104-32025228)
chr8 (160-283)||(39845065-39845189)
chr8 (160-276)||(22156439-22156556)
chr8 (160-318)||(25858721-25858881)
chr8 (160-283)||(32000253-32000377)
chr8 (62-244)||(21640653-21640835)
chr8 (160-334)||(13386063-13386237)
chr8 (27-198)||(27235897-27236072)
chr8 (164-276)||(22162449-22162559)
chr8 (161-283)||(30938783-30938907)
chr8 (91-220)||(30779299-30779427)
chr8 (17-247)||(34517568-34517804)
chr8 (55-152)||(31449420-31449516)
chr8 (55-152)||(17026393-17026490)
chr8 (55-152)||(17556885-17556982)
chr8 (62-152)||(38181776-38181865)
chr8 (57-152)||(15951084-15951178)
chr8 (55-136)||(40125443-40125525)
chr8 (55-152)||(19167113-19167209)
[»] chr7 (28 HSPs)
chr7 (18-248)||(29477746-29477982)
chr7 (18-244)||(6897894-6898121)
chr7 (160-318)||(1858024-1858184)
chr7 (18-247)||(25831842-25832073)
chr7 (163-318)||(46299378-46299535)
chr7 (160-318)||(6851465-6851625)
chr7 (164-318)||(28415582-28415738)
chr7 (160-318)||(46461569-46461730)
chr7 (160-318)||(44412766-44412927)
chr7 (161-283)||(18303843-18303967)
chr7 (160-249)||(34138597-34138687)
chr7 (161-283)||(12978956-12979080)
chr7 (161-283)||(13831979-13832103)
chr7 (160-283)||(20542355-20542478)
chr7 (160-246)||(34132285-34132372)
chr7 (83-216)||(23615846-23615979)
chr7 (165-283)||(13840009-13840129)
chr7 (18-215)||(1288729-1288924)
chr7 (160-247)||(43005119-43005208)
chr7 (55-104)||(16372864-16372913)
chr7 (201-320)||(4831839-4831960)
chr7 (178-220)||(32158556-32158598)
chr7 (18-76)||(1288937-1288996)
chr7 (19-105)||(4333400-4333486)
chr7 (19-105)||(4337647-4337733)
chr7 (49-136)||(4930682-4930770)
chr7 (37-102)||(8268743-8268808)
chr7 (62-102)||(2595296-2595336)
[»] chr2 (34 HSPs)
chr2 (18-244)||(14104965-14105186)
chr2 (160-318)||(5870561-5870721)
chr2 (160-318)||(5873703-5873863)
chr2 (160-283)||(42565389-42565513)
chr2 (160-283)||(42574013-42574137)
chr2 (160-318)||(17739-17898)
chr2 (160-283)||(38083974-38084098)
chr2 (62-249)||(17254865-17255053)
chr2 (160-274)||(18500722-18500837)
chr2 (160-283)||(15943998-15944122)
chr2 (160-283)||(15952513-15952637)
chr2 (57-217)||(44957069-44957229)
chr2 (160-283)||(11874183-11874307)
chr2 (160-283)||(35139094-35139218)
chr2 (160-283)||(35147430-35147554)
chr2 (160-343)||(45031672-45031855)
chr2 (163-318)||(19883893-19884049)
chr2 (160-283)||(24690581-24690705)
chr2 (160-220)||(40386556-40386616)
chr2 (160-283)||(18972553-18972675)
chr2 (161-283)||(41233284-41233408)
chr2 (49-152)||(1934526-1934628)
chr2 (223-318)||(36735775-36735871)
chr2 (34-101)||(31327198-31327264)
chr2 (49-102)||(9185000-9185053)
chr2 (55-136)||(29678223-29678305)
chr2 (55-136)||(30651383-30651465)
chr2 (281-344)||(17879720-17879783)
chr2 (25-152)||(17968494-17968619)
chr2 (49-150)||(9180262-9180362)
chr2 (38-152)||(25496856-25496968)
chr2 (34-104)||(38427024-38427093)
chr2 (178-212)||(41558606-41558640)
chr2 (38-102)||(25477877-25477940)
[»] scaffold0018 (1 HSPs)
scaffold0018 (18-244)||(171207-171434)
[»] chr5 (46 HSPs)
chr5 (18-208)||(18265036-18265225)
chr5 (160-320)||(36448698-36448860)
chr5 (162-318)||(37048813-37048971)
chr5 (160-318)||(25526636-25526796)
chr5 (160-318)||(25533318-25533478)
chr5 (160-283)||(40015383-40015507)
chr5 (160-318)||(20639315-20639475)
chr5 (160-283)||(28844421-28844545)
chr5 (160-283)||(28853031-28853155)
chr5 (160-283)||(36455120-36455244)
chr5 (160-320)||(20092223-20092384)
chr5 (160-283)||(24956290-24956414)
chr5 (160-283)||(24964750-24964874)
chr5 (160-283)||(25041719-25041843)
chr5 (160-318)||(26186100-26186260)
chr5 (160-283)||(30249806-30249930)
chr5 (160-320)||(20099100-20099261)
chr5 (160-320)||(23377752-23377913)
chr5 (161-283)||(1727618-1727742)
chr5 (160-318)||(15956448-15956608)
chr5 (166-283)||(10058265-10058385)
chr5 (161-283)||(43597505-43597629)
chr5 (161-283)||(43630299-43630423)
chr5 (26-151)||(15590984-15591109)
chr5 (160-283)||(23349531-23349657)
chr5 (163-220)||(1285775-1285832)
chr5 (57-152)||(557141-557235)
chr5 (57-152)||(561913-562007)
chr5 (163-220)||(16563771-16563828)
chr5 (55-152)||(36941820-36941916)
chr5 (62-152)||(36429186-36429274)
chr5 (49-102)||(7452215-7452268)
chr5 (169-214)||(13358958-13359003)
chr5 (38-152)||(37248333-37248447)
chr5 (55-136)||(39518864-39518946)
chr5 (55-136)||(39523503-39523585)
chr5 (57-152)||(26667744-26667837)
chr5 (57-152)||(26939341-26939434)
chr5 (161-248)||(16747718-16747807)
chr5 (38-152)||(29167504-29167616)
chr5 (38-152)||(40148348-40148460)
chr5 (167-220)||(15591116-15591169)
chr5 (55-104)||(23757392-23757441)
chr5 (55-104)||(23822848-23822897)
chr5 (57-93)||(41997107-41997143)
chr5 (57-93)||(42001876-42001912)
[»] scaffold0555 (1 HSPs)
scaffold0555 (62-339)||(4695-4971)
[»] scaffold0009 (3 HSPs)
scaffold0009 (161-374)||(163750-163965)
scaffold0009 (261-348)||(148616-148703)
scaffold0009 (160-220)||(148726-148786)
[»] scaffold0119 (1 HSPs)
scaffold0119 (160-318)||(39668-39827)
[»] scaffold0031 (1 HSPs)
scaffold0031 (160-334)||(33175-33351)
[»] scaffold0039 (1 HSPs)
scaffold0039 (160-318)||(89323-89483)
[»] scaffold0027 (1 HSPs)
scaffold0027 (160-283)||(24075-24199)
[»] scaffold0096 (1 HSPs)
scaffold0096 (160-283)||(836-960)
[»] scaffold0016 (1 HSPs)
scaffold0016 (160-320)||(14552-14713)
[»] scaffold0028 (1 HSPs)
scaffold0028 (160-318)||(66260-66421)
[»] scaffold0301 (1 HSPs)
scaffold0301 (160-283)||(9392-9516)
[»] scaffold0085 (2 HSPs)
scaffold0085 (160-266)||(18200-18307)
scaffold0085 (238-318)||(7323-7404)
[»] scaffold1699 (1 HSPs)
scaffold1699 (160-283)||(844-968)
[»] scaffold0043 (1 HSPs)
scaffold0043 (160-283)||(32680-32804)
[»] scaffold0306 (1 HSPs)
scaffold0306 (170-320)||(16098-16251)
[»] scaffold0046 (1 HSPs)
scaffold0046 (223-318)||(86211-86307)
[»] scaffold0351 (1 HSPs)
scaffold0351 (178-283)||(7082-7190)
[»] scaffold0065 (1 HSPs)
scaffold0065 (170-242)||(43703-43777)
[»] scaffold0586 (1 HSPs)
scaffold0586 (160-220)||(5186-5245)
[»] scaffold0002 (1 HSPs)
scaffold0002 (55-152)||(4529-4626)
[»] scaffold0182 (1 HSPs)
scaffold0182 (55-152)||(9436-9532)
[»] scaffold0092 (1 HSPs)
scaffold0092 (164-217)||(14375-14427)


Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 163 - 451
Target Start/End: Original strand, 18482839 - 18483124
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgggacaactcaagataacttttggtgtgtcaaattgtgtcga 262  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18482839 ggagaggaaaagaatagctcgtcaactcaagctaaaggagggagaagagagaaaagttgggacaactcaagagaacttttggtgtgtcaaattgtgtcga 18482938  T
Q  263 atgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatgtgatatgaatgatttttgaaatg 362  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  18482939 atgagagctctatttataggtttaaaggttgatgaaaatggaaaattgatttaatgaattttgatggtgattgaatgtgatttgaatgattttttaaatg 18483038  T
Q  363 gggaagttgacaatgtgacttgccaccactgccggtggcgcggcttagaaannnnnnngtacccctttgaccactttttggactattct 451  Q
    ||||||||||||||||||||| ||||||    |||| |||||||| |||||       | |||||||||||||||||||||||||||||    
T  18483039 gggaagttgacaatgtgacttaccacca---acggtagcgcggctcagaaatttttttggacccctttgaccactttttggactattct 18483124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 16595689 - 16595487
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||| |||||||||||||  ||||||||||| |||||| |||| |||||||||||||||||||| ||||||| |||| |||||| |||||||||| ||||    
T  16595689 ttaaaaatactcttatttctgaagggacaaattttacctaagggactatgttcttaagaccattcttaattctgaagggacattttaaaccaaatagact 16595590  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| ||||||||||||||| ||||| |||||||||       |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  16595589 atggccttaagaacactctttaaattcgaagggacaaaaaaagagggagaggaaaagaattgctcgtcaacacaagctaaaggagggagaagagagaaaa 16595490  T
Q  218 gtt 220  Q
    |||    
T  16595489 gtt 16595487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 55081422 - 55081223
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  |||||||| || ||| ||||||| |||||||||||||||||||| ||||||| |||| ||| ||||||||| || |||||    
T  55081422 ttaagaatactcttatttctgaagggacgaattttcccgaagggactatgttcttaagaccattcttaattctgaagagacgttataaaccgaagggact 55081323  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| ||||||||||||||| ||||| |||||||||       |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  55081322 atggccttaagaacactctttaaattcgaagggacagaaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaa 55081223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 170 - 374
Target Start/End: Original strand, 12613677 - 12613883
Alignment:
Q  170 aaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcgaatgag 267  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    |||||||||||| ||||||| |||| |  |   |||   ||||||    
T  12613677 aaaataatagctcgtcaacacaagataaaggagggagaagagagaaaagttatttgacaactcaagagaactttttgtgtctgtataagtgagtaatgag 12613776  T
Q  268 agctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatgtgatatgaatgatttttgaaatggggaa 367  Q
    ||||||||| ||||||| ||| |||||||| |||| |||| | ||||||||||||||||||| || |||||||||| |||||||||||||||||||| ||    
T  12613777 agctctatttataggttcaaaggttgatgaaaatgaaaaacttgtttaatgaattttgatggggaatgaatgtgatttgaatgatttttgaaatgggaaa 12613876  T
Q  368 gttgaca 374  Q
    |||||||    
T  12613877 gttgaca 12613883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 20513481 - 20513708
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  |||| ||| || ||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| |||||| || ||| |    
T  20513481 ttaagaatactcttatttctgaagagacgaattttaccgaagggactatgttcttaaaaccattcttaatttcgaagggacattttaaaccgaagggatt 20513580  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    |||   |||||| || ||| |||||||||| ||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20513581 atgtttttaagaccattctttaaatccgaaaggacagaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaa 20513680  T
Q  218 g--ttgggacaactcaagataacttttg 243  Q
    |  ||  |||||||||||| ||||||||    
T  20513681 gttttttgacaactcaagagaacttttg 20513708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 53 - 247
Target Start/End: Complemental strand, 40684548 - 40684352
Alignment:
Q  53 accgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| | |||||||||||||||||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  40684548 accgaatggactatgttcttaagaccattcttaattctaaagggacattataaaccgaatggactatgaccttaagaacactctttaaatccgaagggac 40684449  T
Q  153 nnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgt 247  Q
            ||||||||||||| |||| ||||||||||||| ||||| |  |||||||||||||||||  |  |||||||||||| ||||||||||||    
T  40684448 agaaaaacagggagaagaaaagaatatctcgtcaacacaaactaaatggaggagaagagagaaaagttctttgacaactcaagaaaacttttggtgt 40684352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 8816966 - 8817091
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  ||||||||||||||||||||||||||| |||||||    
T  8816966 gagggagaagaaaagaatagctcgtcaacacaagctaaatgagggagaagagagaaaagttctttgacaactcaagataacttttggtgtgtgaaattgt 8817065  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||| |||||||||| ||||||    
T  8817066 gtggaatgtgagctctatttataggt 8817091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 160 - 320
Target Start/End: Complemental strand, 20548987 - 20548825
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  20548987 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 20548889  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||||    
T  20548888 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaa 20548825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 19737463 - 19737623
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  19737463 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 19737561  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  19737562 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 19737623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 15020189 - 15019995
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||| ||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||||  ||||||  |||  |||||||||   |||| |||||    
T  15020189 ttaaaaatactcttatttccaaagggacaaaatttaccgaagggactatgctcttaagaccatccttaattttgaatggacattatatctcaaagggact 15020090  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagaga 212  Q
    |||  |||||||||| |||  |||||||| |||||       |||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15020089 atggtcttaagaacattcttgaaatccgacgggacagaaaaagaggaagaagaaaagaatagcttgtcaacacaagctaaaggagggagaagaga 15019995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 33722644 - 33722533
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||||| || |||||    
T  33722644 ttaagaatactcttattttcgaagcgacaaaatttaccgaatggactatgttcttaagaccattcttaattccgaagggacattataaaccgaagggact 33722545  T
Q  118 atgaccttaaga 129  Q
    ||| || |||||    
T  33722544 atggccgtaaga 33722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 3381894 - 3382018
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  3381894 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 3381992  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  3381993 gtggaatgagggctctatttataggt 3382018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 39744880 - 39745004
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  39744880 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 39744978  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  39744979 gtggaatgagggctctatttataggt 39745004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 3388640 - 3388764
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| || ||||||||||| |||||||    
T  3388640 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaatttttggtgtgtgaaattgt 3388738  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  3388739 gtggaatgagggctctatttataggt 3388764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 50188401 - 50188277
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  50188401 gagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 50188303  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  50188302 gtggaatgagggctctatttataggt 50188277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 55792688 - 55792847
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||    || ||||||| | |||||||||||||| |||||||    
T  55792688 gagggagaagaaaagaatagctcgtcaacacaagctaa--gagggagaagagagaaaagttctttgataactcaatagaacttttggtgtgtgaaattgt 55792785  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  55792786 gtggaatgagggctctatttataggtggggaggttgatgaaaaatggaaaattggtttaatg 55792847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 38853970 - 38853846
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||| ||    |||||||||||| ||||||||||||||||||||||    
T  38853970 gagggagaagaaaagaatagctcgttaacacaagctaaat-agggagaagagagaaaaattctttgacaactcaagagaacttttggtgtgtcaaattgt 38853872  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||  |||||||| ||||||    
T  38853871 gtggaatgaatgctctatttataggt 38853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 8093734 - 8093858
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||||||||||    
T  8093734 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtcaaattgt 8093832  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    ||  |||||| |||||||| ||||||    
T  8093833 gtgaaatgagggctctatttataggt 8093858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 8102539 - 8102663
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||||||||||    
T  8102539 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtcaaattgt 8102637  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    ||  |||||| |||||||| ||||||    
T  8102638 gtgaaatgagggctctatttataggt 8102663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 33722487 - 33722427
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  33722487 gagggagaagaaaagaatagcttgtcaacacaagctaaaggagggagaagagagaaaagtt 33722427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 2574916 - 2574831
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttg 243  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||  |  |||||||||||| ||||||||    
T  2574916 gagggagaagaaaagaatacctcgtcaatacaagctaaaggagggagaagagataaaagttctttgacaactcaagagaacttttg 2574831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 248
Target Start/End: Complemental strand, 39991645 - 39991419
Alignment:
Q  21 agaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatg 120  Q
    |||||||||||||||||||||||| ||  |||| |||||  |||||| ||||||||||||| ||| || ||||| || ||||||   | |||||||| ||    
T  39991645 agaatactcttattttcgaagggataa--tttatcgaagagactatgctcttaagaccattcttactttcgaagggagattatatcacgaatggactgtg 39991548  T
Q  121 accttaagaacactctctaaatccgaagggacnnnnnnngagggagaag-aaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt 219  Q
      ||||| |||||||| ||||||||| || |         |||||| || |||| |||||||| |||||||||| |  ||||||||||||||||||||||    
T  39991547 gtcttaaaaacactctttaaatccgatggaa--gataaaaagggaggagaaaaaaaatagctcatcaacacaagttggaggagggagaagagagaaaagt 39991450  T
Q  220 --tgggacaactcaagataacttttggtgtg 248  Q
      |  ||||||| |||| |||||||||||||    
T  39991449 tctttgacaactaaagagaacttttggtgtg 39991419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 8658066 - 8657982
Alignment:
Q  201 agggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcgaatgagagctctattgataggt 283  Q
    ||||||||||||||||||||    |||||||||||| |||||||||||||| ||||||||| || |||| |||||||| ||||||    
T  8658066 agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggattgagggctctatttataggt 8657982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 37259499 - 37259397
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatg-gactatgaccttaagaacactctctaaatccgaa 147  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| || | ||| | |||||||  |||||||||||||| ||||||||||    
T  37259499 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta-aaccgaaaagcgactatggtcttaagaacactct-taaatccgaa 37259402  T
Q  148 gggac 152  Q
    |||||    
T  37259401 gggac 37259397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 19540826 - 19540712
Alignment:
Q  37 cgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactct 136  Q
    |||||||||| |  ||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  ||||||||||||||    
T  19540826 cgaagggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct 19540727  T
Q  137 ctaaatccgaagggac 152  Q
     ||| |||||||||||    
T  19540726 -taattccgaagggac 19540712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 37264199 - 37264097
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaag 148  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    |||  |||||||  |||||||||||||| |||||||||||    
T  37264199 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaactgaaaagcgactatggtcttaagaacactct-taaatccgaag 37264101  T
Q  149 ggac 152  Q
    ||||    
T  37264100 ggac 37264097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 31269486 - 31269587
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatg-gactatgaccttaagaacactctctaaatccgaa 147  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| || | ||| | |||||||  |||||||||||||| ||||||||||    
T  31269486 atttatcgaagggactatgtt-ttaagaccattcttaattccgaagggacatta-aaccgaaaagcgactatggtcttaagaacactct-taaatccgaa 31269582  T
Q  148 gggac 152  Q
    |||||    
T  31269583 gggac 31269587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 31273975 - 31274076
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatg-gactatgaccttaagaacactctctaaatccgaa 147  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| || | ||| | |||||||  |||||||||||||| ||||||||||    
T  31273975 atttatcgaagggactatgtt-ttaagaccattcttaattccgaagggacatta-aaccgaaaagcgactatggtcttaagaacactct-taaatccgaa 31274071  T
Q  148 gggac 152  Q
    |||||    
T  31274072 gggac 31274076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 5271057 - 5270970
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactct 136  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  ||||||||||||||    
T  5271057 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct 5270970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 51698387 - 51698483
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| |||||||   |||||||||||||| ||| |||||||||||    
T  51698387 cgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactattgtcttaagaacactct-taattccgaagggac 51698483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 16421507 - 16421554
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  16421507 cgaagggactatgtttttaagaccattcttaattccgaagggacatta 16421554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 31729025 - 31728938
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactct 136  Q
    ||||| |||||| |||||||| ||||||||||| ||||||| |||| ||||||| |    ||| ||||||||  ||||||||||||||    
T  31729025 atttatcgaagggactatgtttttaagaccattcttaattcagaagggacattaaaccgaaaagggactatggtcttaagaacactct 31728938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 5927874 - 5927798
Alignment:
Q  25 tactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    |||||||  ||| ||||||||| |  ||| |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  5927874 tactctttattttgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacatta 5927798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 13065451 - 13065382
Alignment:
Q  34 tttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattat 103  Q
    ||||||||||||| |  ||| ||||||  ||||||| |||||||| || |||||||||||| ||||||||    
T  13065451 tttcgaagggacatacattatcgaaggggctatgtttttaagacctttcttaattccgaagggacattat 13065382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 4e-76; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 14042018 - 14042250
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| || |||||    
T  14042018 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattcttaatttcgaagggacattataaaccgaagggact 14042117  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| |||| ||||||| || |||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14042118 atggcctttagaacacactttaaatccgaagggacagaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaa 14042217  T
Q  218 gt--tgggacaactcaagataacttttggtgtg 248  Q
    ||  |  |||||||||||  |||||||||||||    
T  14042218 gttctttgacaactcaagggaacttttggtgtg 14042250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 35130001 - 35130199
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||  ||||||||||||| || |||||    
T  35130001 ttaagaatactcttattttcgaagg-acaaaatttaccgaagagactatgttcttaagaccattcttaattccgaatggacattataaaccgaagggact 35130099  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||||||||||||||| ||| |||||||||||||||       |||||||| ||||| ||||| | |||||| ||||||||||||||||||||||||||||    
T  35130100 atgaccttaagaacattctttaaatccgaagggacagaaaaagagggagaggaaaagaatagattgtcaacccaagctaaaggagggagaagagagaaaa 35130199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 19899565 - 19899441
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  19899565 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 19899467  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  19899466 gtggaatgagggctctatttataggt 19899441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 25505983 - 25506107
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  25505983 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 25506081  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  25506082 gtggaatgagggctctatttataggt 25506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 32814792 - 32814589
Alignment:
Q  17 attaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggac 116  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |||| | |||| |||| ||| ||||||| |||| || |||||      || ||||    
T  32814792 attaagaataaacttattttcgaagggacaaaatttaccgaagggactaagctcttgagactattcttaattctgaagggaaattatttcttgaagggac 32814693  T
Q  117 tatgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaa 216  Q
    ||||  |||||||||||||| |||||  || |||||       |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  32814692 tatggtcttaagaacactctttaaatttgacgggacataaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagagagaagagagaaa 32814593  T
Q  217 agtt 220  Q
    ||||    
T  32814592 agtt 32814589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 19720453 - 19720329
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    ||| |||||||| |||||||||||||| |||||||    
T  19720453 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgactactcaagagaacttttggtgtgtgaaattgt 19720355  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  19720354 gtggaatgagggctctatttataggt 19720329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 163 - 318
Target Start/End: Original strand, 22764329 - 22764485
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtc 260  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||    |||||||||| | |||||||||||| | |||||||||     
T  22764329 ggagaagaaaagaatagctcgtcaacacaagctaa--gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgtctgaaattgtgtg 22764426  T
Q  261 gaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    |||||||||||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  22764427 gaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 22764485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 160 - 320
Target Start/End: Complemental strand, 18909695 - 18909535
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| || |||| | ||||||||||||    
T  18909695 gagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaattttttg-gtgtcaaattgt 18909598  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaa 320  Q
    |  | ||||| |||||||| ||||||  | | |||||||| ||||||||||||||||||||||    
T  18909597 gagggatgagggctctatttataggtgaagaggttgatgaaaatggaaaattggtttaatgaa 18909535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 22232062 - 22232222
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  22232062 gagggagaggaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 22232160  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| ||| |||| ||||||  | | ||||||| | || |||||||||||||||||    
T  22232161 gtggaatgagggctatatttataggtggagaggttgatgaaaaaaggaaaattggtttaatg 22232222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 123 - 283
Target Start/End: Complemental strand, 28969659 - 28969497
Alignment:
Q  123 cttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttg- 221  Q
    ||||||||||||||  |||||||| |||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||     
T  28969659 cttaagaacactcttaaaatccgacgggacatgaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaaattgt 28969560  T
Q  222 -ggacaactcaagataacttttggtgtgtcaaattgtgtcgaatgagagctctattgataggt 283  Q
      |||||||||||| || |||||||||||| |   ||   |||||||||||||||| ||||||    
T  28969559 atgacaactcaagagaagttttggtgtgtctataagtaaggaatgagagctctatttataggt 28969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 318
Target Start/End: Original strand, 22778578 - 22778734
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtc 260  Q
    ||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||    |||||||||| | |||||||||||||| |||||||||     
T  22778578 ggagaagtaaagaatagctcgtcaacacaagctaa--gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgtgtgaaattgtgtg 22778675  T
Q  261 gaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  22778676 gaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 22778734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 10984528 - 10984645
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  10984528 gagggagaagaaaagaatagctcgttaacacaagctaaac-agggagaagagagaaaagttttttgacaactcaagagaacttttggtgtgtgaaattgt 10984626  T
Q  258 gtcgaatgagagctctatt 276  Q
    || ||||||| ||||||||    
T  10984627 gtggaatgagggctctatt 10984645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 20458919 - 20459036
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||    |||||||||||| ||||||||||||||  ||||||    
T  20458919 gagggagaagaaaagaatagctcgttaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgt 20459017  T
Q  258 gtcgaatgagagctctatt 276  Q
    || ||||||| ||||||||    
T  20459018 gtggaatgagggctctatt 20459036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 20452102 - 20452226
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||    |||||||||||| ||||||||||||||  ||||||    
T  20452102 gagggagaagaaaagaatagctcgttaacacaagctaaat-agggagaagagagaaaagttcattgacaactcaagagaacttttggtgtgtgtaattgt 20452200  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||  |||||||| ||||||    
T  20452201 gtggaatgatggctctatttataggt 20452226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 26897060 - 26896900
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||| |||||||||||||||  ||||||||||||||||| |  |  |||||||||||| |||||||||||| | |||||||    
T  26897060 gagggagaagaaaagaatagctcatcaacacaagctaaa-tagggagaagagagaaaaattctttgacaactcaagagaacttttggtgtttgaaattgt 26896962  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| || |||    | ||||||| | ||||||||||||||||||||    
T  26896961 gtggaatgagggctctatttattggtgaggaggttgatgaaaaatggaaaattggtttaatg 26896900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 28702341 - 28702465
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    ||||||||  |||||||||||||||||||||||||||||  |||||||||||| |||||||    |||||||||||| ||||||| |||||| |||||||    
T  28702341 gagggagagaaaaataatagctcgtcaacacaagctaaat-agggagaagagataaaagttctttgacaactcaagagaactttttgtgtgtgaaattgt 28702439  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || |||| ||||||||||| ||||||    
T  28702440 gtggaataagagctctatttataggt 28702465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 30823980 - 30824104
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||||||||||    
T  30823980 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtcaaattgt 30824078  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    ||  |||||| |||||||| ||||||    
T  30824079 gtgaaatgagggctctatttataggt 30824104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 5496241 - 5496324
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatt 101  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||    
T  5496241 ttaataatactctaattttcgaagggataaaatttaccgaaggaactatgctcttaagaccatttttaattccaaagggacatt 5496324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 62 - 248
Target Start/End: Original strand, 14775961 - 14776149
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatgga-ctatgaccttaagaacactctctaaatccgaagggac-nnnnnnn 159  Q
    ||||||||||||| |||||| |||||||| |||  |||||||||||| |||||  ||||||||||||||||||||| |||||| ||||||||            
T  14775961 actatgttcttaa-accatttttaattccaaaggaacattataaaccgaatgggtctatgaccttaagaacactctttaaatctgaagggacagaaaaaa 14776059  T
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagag-aaaagttgggacaactcaagataacttttggtgtg 248  Q
     ||||| ||||||| |||||||||||||  | ||||||| | ||||||| |||| |||| ||  |||||||||||| |||||||||||||    
T  14776060 aagggaaaagaaaaaaatagctcgtcaagcctagctaaatgggggagaaaagagaaaaaattttgacaactcaagagaacttttggtgtg 14776149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 35091120 - 35091244
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  ||||||    
T  35091120 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgt 35091218  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  35091219 gtggtatgagggctctatttataggt 35091244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 12666991 - 12667151
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt--gggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||| ||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||    ||||||||  || |||||||| ||||| |||||||    
T  12666991 gaggaagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttcattgacaactc--gagaacttttgatgtgtgaaattgt 12667087  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    || ||||||| |||||||| ||||||    | ||||||| | || |||||||||||||||||||    
T  12667088 gtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaattggtttaatgaa 12667151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 3917045 - 3917171
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgt----gtcaaa 253  Q
    |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||||  |  |||||||||||| ||||||||||||    || |||    
T  3917045 gagggagaagaaaagaaaagctcgtcaacacaagctaaa-ttgggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtacgtgaaa 3917143  T
Q  254 ttgtgtcgaatgagagctctattgatag 281  Q
    |||||| ||||||| |||||||| ||||    
T  3917144 ttgtgtggaatgagggctctatttatag 3917171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 19714258 - 19714173
Alignment:
Q  200 gagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcgaatgagagctctattgataggt 283  Q
    |||||||||||||||||||||    |||||||||||| |||||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  19714258 gagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggt 19714173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 16835793 - 16835691
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaag 148  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| |||||||||||    
T  16835793 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taaatccgaag 16835695  T
Q  149 ggac 152  Q
    ||||    
T  16835694 ggac 16835691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 275
Target Start/End: Original strand, 29600896 - 29601002
Alignment:
Q  170 aaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcgaatgag 267  Q
    ||||||||||||||| |||| ||||||| | ||||||||||||||||||||    |||||||||||| || |||| |||||| ||||||||  |||||||    
T  29600896 aaaataatagctcgttaacataagctaa-gtagggagaagagagaaaagttctttgacaactcaagagaaattttagtgtgtgaaattgtgaggaatgag 29600994  T
Q  268 agctctat 275  Q
     |||||||    
T  29600995 ggctctat 29601002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 29610621 - 29610529
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagg 149  Q
    |||| ||| |||| |||| |||||| |||||||||||   |||||| ||||| || |||||||||||||||||||||| | ||||||||||||    
T  29610621 aagggactgtgttattaaaaccattcttaattccgaatgaacattacaaaccgaagggactatgaccttaagaacactatttaaatccgaagg 29610529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 17914056 - 17914150
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| ||||||  |||||||||||| |||||||||||| |||||||||    ||||||||||||  |||||||||||||| |||||||||| ||||    
T  17914056 aagggactatgcacttaagaccattcttaattccgaagggacattatatcgaaaatggactatggtcttaagaacactct-taaatccgaaaggac 17914150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 28002447 - 28002329
Alignment:
Q  169 gaaaataatagctcgtcaacacaagcta--aaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgtgtcgaat 264  Q
    ||||| ||||||||||||||||| | ||  || ||||||||||||||||||||  |  |||| ||||||| || |||| || ||| ||||||||| ||||    
T  28002447 gaaaagaatagctcgtcaacacatgttataaatgagggagaagagagaaaagttctttgacagctcaagagaattttttgtatgtgaaattgtgtggaat 28002348  T
Q  265 gagagctctattgataggt 283  Q
    |  ||||||||| ||||||    
T  28002347 gtcagctctatttataggt 28002329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 4156976 - 4156887
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||| ||| ||| |||||||||||    
T  4156976 actatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggactatggtcttaagaacaatct-taattccgaagggac 4156887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 11570392 - 11570277
Alignment:
Q  37 cgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaa--atggactatgaccttaagaacact 134  Q
    |||||||||| |  ||| |||| | |||||||| ||||||||||| |||||||||||| ||||||| || | ||  | ||||||||  ||||||||||||    
T  11570392 cgaagggacatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacatta-aatcgaaagagggactatggtcttaagaacact 11570294  T
Q  135 ctctaaatccgaagggac 152  Q
    || ||| |||||||||||    
T  11570293 ct-taattccgaagggac 11570277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 22610019 - 22610061
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattata 104  Q
    |||||| |||||| |||||| ||||||||||||||||||||||    
T  22610019 actatgctcttaaaaccattcttaattccgaagtgacattata 22610061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 17964185 - 17964090
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||||| ||||||||||| |||||||||||| ||||||| ||   ||| ||||||||  ||| |||||||||  ||| |||||||||||    
T  17964185 cgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaacgaaaaaggactatggtcttgagaacactc-ataattccgaagggac 17964090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 7245022 - 7245081
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    ||||||||| |||| || | |||||||||||||||||||  ||||||||||| ||||||||    
T  7245022 gagggagaaaaaaagaagaactcgtcaacacaagctaaa-tagggagaagagtgaaaagtt 7245081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 11534329 - 11534289
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacatta 102  Q
    |||||||| ||||||||||| |||||||||||| |||||||    
T  11534329 actatgtttttaagaccatttttaattccgaagggacatta 11534289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 11559839 - 11559799
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacatta 102  Q
    |||||||| ||||||||||| |||||||||||| |||||||    
T  11559839 actatgtttttaagaccattcttaattccgaagggacatta 11559799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 12689442 - 12689536
Alignment:
Q  56 gaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    ||||| |||||||| ||||||||||| |||||||||||| ||| ||| |    ||||||||||||  ||||| |||||||| ||| |||||||||||    
T  12689442 gaagggactatgtt-ttaagaccattcttaattccgaagggacgttaaaccgaaaatggactatggtcttaaaaacactct-taattccgaagggac 12689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 3e-71; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 36725082 - 36725314
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||| | |||||||||||||| |||||| ||||| |||||||||||||||| |||||    
T  36725082 ttaagaatactcttattttcgaagggacaaaatttaccgtaaggactttattcttaagaccattcttaatttcgaagggacattataaaccaaaaggact 36725181  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| ||||||||||||||| |||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36725182 atggccttaagaacactctttaaatccgaagggacagaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaa 36725281  T
Q  218 gt--tgggacaactcaagataacttttggtgtg 248  Q
    ||  |  |||||||||| | |||||||||||||    
T  36725282 gttatttgacaactcaaaagaacttttggtgtg 36725314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 19309329 - 19309128
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||| ||||||||||||||  || ||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||    
T  19309329 ttaataatactcttattttaaaatgga-aaaatttactgaagggactatgttcttaagaccattattaattccgaagggacattataaaccgaagagact 19309231  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||||||||||||||||||| ||||||||||||| |       |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  19309230 atgaccttaagaacactctttaaatccgaagggtcagaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaggaaggagaaaagagaaaa 19309131  T
Q  218 gtt 220  Q
    |||    
T  19309130 gtt 19309128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 33380649 - 33380417
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||||||||||||||||| |||||| | ||| | ||||||||| |||||||||||||||||||| |||||||||||| |||||| |||||  || |||||    
T  33380649 ttaagaatactcttatttccgaaggaaaaaattataccgaagggactatgttcttaagaccattcttaattccgaagggacattttaaactgaagggact 33380550  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
     |||||||||||||||||| ||||||| |||||||       |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  33380549 ttgaccttaagaacactctttaaatccaaagggacagaaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagcagagagaaaa 33380450  T
Q  218 gt--tgggacaactcaagataacttttggtgtg 248  Q
    ||  |  |||||||||| | |||||||||||||    
T  33380449 gttctttgacaactcaaaagaacttttggtgtg 33380417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 12906527 - 12906745
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||           ||||| |||||||||||| ||||||||||||| || |||||    
T  12906527 ttaagaatactcttattttcgaagggacaaaatttaccgaagggaata-----------ccattcttaattccgaagggacattataaaccgaagggact 12906615  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| ||||||||||||||| |||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  12906616 atggccttaagaacactctttaaatccgaagggacagaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagatagaaaa 12906715  T
Q  218 gt--tgggacaactcaagataacttttggt 245  Q
    ||  |  |||||||||||||||||||||||    
T  12906716 gttctttgacaactcaagataacttttggt 12906745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 31064330 - 31064557
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||| ||||||||  |||||||| || ||||||||||| |||||||||||||||||||| | |||||||||| |||||| |||||||||  ||||    
T  31064330 ttaagaatagtcttatttcagaagggactaattttaccgaagggactatgttcttaagaccattctcaattccgaagggacattttaaaccaaagagact 31064429  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    |||| |||||||||||||| |||||||||||||||       ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  31064430 atgatcttaagaacactctttaaatccgaagggacataaaaagagggagaataaaagaatagttcgtcaacacaagctaaaggagggagaagagagaaaa 31064529  T
Q  218 gt--tgggacaactcaagataacttttg 243  Q
     |  |  |||||||||||| ||||||||    
T  31064530 attctttgacaactcaagagaacttttg 31064557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 27761560 - 27761359
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||| ||||||||||| |||||||| || ||||||||||| ||||| |||||||||||||| ||| ||| |||| |||||| ||||||||| |||||    
T  27761560 ttaagaacactcttatttttgaagggacgaattttaccgaagggactattttcttaagaccattctta-ttctgaagggacattttaaaccaaagggact 27761462  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| ||||||||||||||| ||||| |||||||||       |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27761461 atggccttaagaacactctttaaattcgaagggacagaaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaa 27761362  T
Q  218 gtt 220  Q
    |||    
T  27761361 gtt 27761359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 2493542 - 2493310
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| ||||||||    | || |||||    
T  2493542 ttaagaatactcttattttcgaagggacaaaatttaccgaagggactatgctcttaagaccattcttaattccgaagggacattatttctcgaagggact 2493443  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    |||  ||||| |||| ||| ||||||| | |||||       |||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  2493442 atggtcttaaaaacattctttaaatcctacgggacaaaaagagagggagatgaaaagaataactcgtcaacacaagctaaatgagggagaagagagaaaa 2493343  T
Q  218 g--ttgggacaactcaagataacttttggtgtg 248  Q
    |  ||  |||||||||| | |||||||||||||    
T  2493342 gttttttgacaactcaaaagaacttttggtgtg 2493310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 25661566 - 25661343
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||| ||||  |||||||| ||||||||| |||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  25661566 ttaagaatactctaatttctgaagggacgaaatttacc-aagggacaatgttcttaagaccattcttaattccgaagggacattataaaccaaatggact 25661468  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| |||||| |||||||| |||        |||        |||||||||||||  |||||||||||||||||||| |||||||||||| |||||||||    
T  25661467 atggccttaataacactct-taa--------ggatagaaaaagagggagaagaaatgaatagctcgtcaacacaagccaaaggagggagatgagagaaaa 25661377  T
Q  218 gt--tgggacaactcaagataacttttggtgtgt 249  Q
    ||  |  |||||||||||| |||||||| |||||    
T  25661376 gttctttgacaactcaagagaacttttgttgtgt 25661343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 24159541 - 24159307
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  |||||||| || ||||||||||| ||||||||||||||||| || |||||||||||| |||||| |||||| || |||||    
T  24159541 ttaagaatactcttatttctgaagggacgaattttaccgaagggactatgttcttaagaccgttcttaattccgaagggacattttaaaccgaagggact 24159442  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggag-----aaga-aaataatagctcgtcaacacaagctaaaggagggagaagag 211  Q
    ||| |||||||||||| || |||||| ||||||||       |||||||     |||| ||| |||| | ||||||||||||||||| |||| | |||||    
T  24159441 atggccttaagaacaccctttaaatctgaagggacagaaaaagagggagagaaaaagagaaagaataacacgtcaacacaagctaaaagaggaaaaagag 24159342  T
Q  212 agaaaagt--tgggacaactcaagataacttttgg 244  Q
    ||||||||  |  |||||||||||| |||||||||    
T  24159341 agaaaagtcatttgacaactcaagagaacttttgg 24159307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 28857783 - 28857579
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  |||||||| || ||||||||||| |||||||||||||||||||| ||||||| |||  |||||| |||||| || |||||    
T  28857783 ttaagaatactcttatttctgaagggacgaattttaccgaagggactatgttcttaagaccattcttaattctgaatggacattttaaaccgaaaggact 28857684  T
Q  118 atgaccttaagaacactctctaaatccgaagggac-nnnnnnngagggagaagaaaataatagctcgtcaacac-aagctaaaggagggagaagagagaa 215  Q
    | ||||| ||||||||||  |||||| ||||| ||        |||||||||||||| |||||||   |||||| |||||||||||||||||||| ||||    
T  28857683 aagacctgaagaacactcattaaatctgaaggaacagaaaaaagagggagaagaaaagaatagcttagcaacacaaagctaaaggagggagaagacagaa 28857584  T
Q  216 aagtt 220  Q
    |||||    
T  28857583 aagtt 28857579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 248
Target Start/End: Complemental strand, 9353024 - 9352799
Alignment:
Q  25 tactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgacct 124  Q
    ||||||||||||| || ||   ||||||||| |||| |||||||||||||||||||| |||||| |||||  ||| |||||||| || |||||||| |||    
T  9353024 tactcttattttcaaaagggggaaatttaccaaagggactatgttcttaagaccattcttaatttcgaaggaacaatataaaccgaagggactatggcct 9352925  T
Q  125 taagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa--gttgg 222  Q
    || ||| ||| | | ||||||||||||        ||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||  | |      
T  9352924 taggaatactatttcaatccgaagggatataaaaagagggtgaagaaaagaatagctcgtcaacagaagataaaggagggagaagagagaaaaatgcttt 9352825  T
Q  223 gacaactcaagataacttttggtgtg 248  Q
    || ||||||||| |||||||||||||    
T  9352824 gaaaactcaagagaacttttggtgtg 9352799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 9252707 - 9252904
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||| |||||||||||||||||| ||  || |||||||||||| |||||||||||||||| ||| |||||||||||  ||||||||||| |||| |||||    
T  9252707 ttaataatactcttattttcgaaaggggaatatttaccgaagggactatgttcttaagactattcttaattccgaacggacattataaatcaaagggact 9252806  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaa 215  Q
    ||  ||||| || | || | | |||||||||||||       ||||| |||||||| ||||| ||||||||| ||  |||||||||||||||||||||    
T  9252807 atagccttaggatcgctatttcaatccgaagggacaaaaaaagagggcgaagaaaagaataggtcgtcaacataaattaaaggagggagaagagagaa 9252904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 44832005 - 44832165
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||| | |||||||    
T  44832005 gagggagaagaaaagaatagctcgttaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtctgaaattgt 44832103  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  44832104 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 44832165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 47108981 - 47108861
Alignment:
Q  164 gagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcg 261  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| ||||||||| |    
T  47108981 gagaagaaaagaatagctcgttaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtgg 47108883  T
Q  262 aatgagagctctattgataggt 283  Q
    |||||| |||||||| ||||||    
T  47108882 aatgagggctctatttataggt 47108861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 2416156 - 2416280
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||| ||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  2416156 gaggaagaagaaaaaaatagctcgttaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 2416254  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  2416255 gtggaatgagggctctatttataggt 2416280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 23191742 - 23191544
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||||||||||||||||||  |||||||||||||||||||||  |||||| | || |||| ||| |||||||||||| ||||||||      || ||||     
T  23191742 ttaagaatactcttatttttaaagggacaaaatttaccgaagagactatgatattgagactattcttaattccgaagggacattatttcttgaagggacc 23191643  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaa 216  Q
    |||  ||||| || ||||| ||||||||| | |||       |||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  23191642 atggtcttaaaaaaactctttaaatccgacgagacagaaaaagagggagaggaaaagaataactcgtcaacacaagctaaatgagggagaagagagaaa 23191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 161 - 318
Target Start/End: Complemental strand, 51968541 - 51968381
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |  |  |||||||||||| ||| ||||||||||  |||||||    
T  51968541 agggagaagaaaaaaatagctcgtcaacacaagctaaatgagggagaagagagaaaaattctttgacaactcaagagaactttttggtgtgagaaattgt 51968442  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatg 318  Q
    |  | ||||| | |||||| ||||||    | |||||||| ||||||||||||||||||||    
T  51968441 gagggatgagggatctatttataggtgaggaggttgatgaaaatggaaaattggtttaatg 51968381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 25 - 247
Target Start/End: Complemental strand, 9328178 - 9327954
Alignment:
Q  25 tactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgacct 124  Q
    |||||||||||||||| ||   ||||||||| |||| |||||||||||||||||||| |||||| ||||| |||| |||||||| || |||| ||| | |    
T  9328178 tactcttattttcgaaagggggaaatttaccaaagggactatgttcttaagaccattcttaatttcgaagggacaatataaaccgaagggacgatggctt 9328079  T
Q  125 taagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa--gttgg 222  Q
    || ||| ||| | | ||||| || ||||       |||||  ||||||| |||||||| |||||| ||| |||||||||||||||||||||||  | |      
T  9328078 taggaatactatttcaatccaaatggacataaaaagagggcaaagaaaagaatagctcatcaacagaagataaaggagggagaagagagaaaaatgcttt 9327979  T
Q  223 gacaactcaagataacttttggtgt 247  Q
    || ||||||||| ||||||||||||    
T  9327978 gaaaactcaagagaacttttggtgt 9327954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 15473319 - 15473436
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  15473319 gagggaaaataaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 15473417  T
Q  258 gtcgaatgagagctctatt 276  Q
    || |||||||  |||||||    
T  15473418 gtggaatgaggtctctatt 15473436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 20429970 - 20429845
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattg 256  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| ||||||||||| ||||||    
T  20429970 gagggagaagaaaagaatagctcgtcaacacaagctaaa-aagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgaaattg 20429872  T
Q  257 tgtcgaatgagagctctattgataggt 283  Q
    ||| ||||||| | |||||| ||||||    
T  20429871 tgtggaatgagggttctatttataggt 20429845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 19368075 - 19367951
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||| |  |  |||||||||||| |||||||||||||| |||||||    
T  19368075 gagggagaagaaaagaatagctggtcaacacaagctaaa-aagggagaagagagaaaaattctttgacaactcaagagaacttttggtgtgtgaaattgt 19367977  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| | |||||| ||||||    
T  19367976 gtggaatgagggatctatttataggt 19367951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 3432354 - 3432476
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt--gggacaactcaagataacttttggtgtgtcaaattgtg 258  Q
    ||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||    |||||||||||| ||||||| | |||||||||||||    
T  3432354 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttcattgacaactcaagagaactttttg-gtgtcaaattgtg 3432451  T
Q  259 tcgaatgagagctctattgataggt 283  Q
    | ||||||| |||||||| ||||||    
T  3432452 tggaatgagggctctatttataggt 3432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 8770074 - 8770178
Alignment:
Q  113 ggactatgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagaga 212  Q
    ||||||||  |||||||||| |||  ||||||||||||||       |||||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  8770074 ggactatggtcttaagaacattcttaaaatccgaagggacggaaaaagagggagaagaaaagaatagctcttcaacaaaagctaaaggagggagaagaga 8770173  T
Q  213 gaaaa 217  Q
    |||||    
T  8770174 gaaaa 8770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 31540579 - 31540455
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||| | |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  ||||||    
T  31540579 agggagaagaaaagaatagctcattaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgt 31540481  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  31540480 gtggtatgagggctctatttataggt 31540455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 31549148 - 31549024
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||| | |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  ||||||    
T  31549148 agggagaagaaaagaatagctcattaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgt 31549050  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  31549049 gtggtatgagggctctatttataggt 31549024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 25844213 - 25844316
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaacc---aaatggactatgaccttaagaacactctctaaatccg 145  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| |||||||  ||||   ||| ||||||||  |||||||||||||| ||||| ||    
T  25844213 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta--aaccgaaaaagggactatggtcttaagaacactct-taaattcg 25844309  T
Q  146 aagggac 152  Q
    |||||||    
T  25844310 aagggac 25844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 10140555 - 10140642
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactct 136  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  ||||||||||||||    
T  10140555 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct 10140642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 136
Target Start/End: Original strand, 38621175 - 38621254
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactct 136  Q
    |||| |||||||| |||||| |||||||||||| |||| ||||||| ||   ||| ||||||||| ||||||||||||||    
T  38621175 aagggactatgtttttaagagcattattaattctgaagggacattaaaacgaaaagggactatgatcttaagaacactct 38621254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 10135787 - 10135840
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  10135787 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 10135840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 16833940 - 16834036
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| ||||||  |||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  16833940 cgaagggactatgaacttaagaccattcttaattccgaagggacattaaatcggaaagggactatggtcttaagaacactct-taattccgaagggac 16834036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 39200420 - 39200343
Alignment:
Q  25 tactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    |||||||  ||||||||||||  |  ||| |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  39200420 tactctttatttcgaagggacttatattatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 39200343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 16649279 - 16649167
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctc 137  Q
    ||||||||| |  ||| |||||| |||||||| ||||||||||| |||||| ||||| ||||||| |    ||| ||||||||  ||||||||||||||     
T  16649279 gaagggacatatattatcgaagggactatgtt-ttaagaccattcttaatttcgaagggacattaaaccgaaaagggactatggtcttaagaacactct- 16649182  T
Q  138 taaatccgaagggac 152  Q
    ||| |||||||||||    
T  16649181 taattccgaagggac 16649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 3094532 - 3094628
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||| | ||||||||||| |||||| ||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  3094532 cgaagggactatgctgttaagaccattcttaatttcgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 3094628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 62 - 339
Target Start/End: Complemental strand, 5939 - 5660
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnnnnnga 161  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||| || |||||||| |||||| |||||||| |||||||||||||||       ||    
T  5939 actatgttcttaagaccattcttaatttcgaagggacattataaaccgaagggactatggccttaaaaacactctttaaatccgaagggactaaaaaaga 5840  T
Q  162 gggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgtgt 259  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||  |  |||||||||||| ||||||| ||||||  |   |||     
T  5839 gggagaaaaaaagaatagctcgtcaacacaagctgaaggagggagaagagagaaaagttctttgacaactcaagaaaactttttgtgtgtgtataagtga 5740  T
Q  260 cgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatg 339  Q
     |||||||| || |||| ||||||| ||| |||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  5739 ggaatgagaactttatttataggttcaaaggttgatgaaaatggaaaattggtttaatggattttgatggggattgaatg 5660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 9e-62; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 48432023 - 48431795
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||    
T  48432023 ttaagaatactcttatttccgaagggacaaaatttatcgaagggactatgttcttaagaccattcttaatttcgaagggacattataaaccgaatggact 48431924  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| | ||||||||||||| |||||||||||||||       ||| |||| ||||| ||||| ||||| |||||| ||||||||||||||||||||||||    
T  48431923 atggcattaagaacactctttaaatccgaagggacagaaaaagagagagaggaaaagaatagttcgtcgacacaacctaaaggagggagaagagagaaaa 48431824  T
Q  218 gt--tgggacaactcaagataacttttgg 244  Q
    ||  |  |||||||||||| |||||||||    
T  48431823 gttatttgacaactcaagagaacttttgg 48431795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 4662539 - 4662741
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||||||||||||||||||  ||||||| || |||| |||||| |||||||||||||||||||| |||||||||||| |||||| |||||| || |||||    
T  4662539 ttaagaatactcttattttttaagggacgaattttatcgaagggactatgttcttaagaccattcttaattccgaagggacattttaaaccgaagggact 4662638  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| ||||||||||||||| |||||||||||||||       ||||||||  |||| ||||||||||||||||||||||||  ||||| || | ||||||    
T  4662639 atggccttaagaacactctttaaatccgaagggacagaaagagagggagacaaaaagaatagctcgtcaacacaagctaaaacagggataacaaagaaaa 4662738  T
Q  218 gtt 220  Q
    |||    
T  4662739 gtt 4662741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 57 - 244
Target Start/End: Original strand, 16983375 - 16983564
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnn 156  Q
    |||| |||||||||||||||||||| |||||||||||| |||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||        
T  16983375 aagggactatgttcttaagaccattcttaattccgaagggacattttaaaccgaatagactatgaccttaagaacactctttaaatccgaagggacaaaa 16983474  T
Q  157 nnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttgg 244  Q
       |||| |||  |||| ||||||||||||||||||||||||||||||||||||||||||| |  |  |||||||||||| |||||||||    
T  16983475 aaagaggaagagaaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaaattatttgacaactcaagagaacttttgg 16983564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 14892582 - 14892744
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||| ||||| |||||||    
T  14892582 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttgatgtgtgaaattgt 14892680  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    || |||||||||||||||| ||||||    | ||||||| | ||||||||||||||||||||||    
T  14892681 gtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaa 14892744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 13105095 - 13105255
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  13105095 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 13105193  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  13105194 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 13105255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 14880767 - 14880927
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||| ||||| |||||||    
T  14880767 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttgatgtgtgaaattgt 14880865  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || |||||||||||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  14880866 gtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 14880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 21638014 - 21638138
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  21638014 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 21638112  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || |||||||||||||||| ||||||    
T  21638113 gtggaatgagagctctatttataggt 21638138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 261966 - 261842
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaag--ttgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||   |  |||||||||||| |||||||||||||| |||||||    
T  261966 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagatctttgacaactcaagagaacttttggtgtgtgaaattgt 261868  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || |||||||||||||||| ||||||    
T  261867 gtggaatgagagctctatttataggt 261842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 8606769 - 8606609
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  8606769 gagggagaagaaaagaatagttcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 8606671  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  8606670 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 8606609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 162 - 318
Target Start/End: Original strand, 48060187 - 48060345
Alignment:
Q  162 gggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgt 259  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||||    
T  48060187 gggagaagaaaagaatagctcgttaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgt 48060285  T
Q  260 cgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
     ||||||| |||||||| |||| |  | | ||||||| | ||||||||||||||||||||    
T  48060286 ggaatgagggctctatttatagttgaagaggttgatgaaaaatggaaaattggtttaatg 48060345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 4313048 - 4313207
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||    |||||||||| | |||||||||||||| |||||||    
T  4313048 gagggagaagaaaagaatagctcgtcaacacaagctaa--gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgtgtaaaattgt 4313145  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  4313146 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 4313207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 11181376 - 11181218
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  ||||||||  || |||||||||||||| |||||||    
T  11181376 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttgacaactc--gagaacttttggtgtgtgaaattgt 11181280  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || |||||||||||||||| ||||||    | ||||||| |||| |||||||||||||||||    
T  11181279 gtggaatgagagctctatttataggtgaggaggttgatgaagaaaggaaaattggtttaatg 11181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 8613230 - 8613070
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  | |||||||||| |||||||||||||| |||||||    
T  8613230 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttggcaactcaagagaacttttggtgtgtgaaattgt 8613132  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||  |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  8613131 gtggaatgaaggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 8613070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 13111252 - 13111376
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  13111252 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 13111350  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||  |||||||| ||||||    
T  13111351 gtggaatgatggctctatttataggt 13111376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 23287583 - 23287707
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  23287583 gagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 23287681  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  23287682 gtggaatgagggctctatttataggt 23287707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 68762 - 68638
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  68762 gagggagaagaaaagaatagcttgtcaacacaagctaaaa-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 68664  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  68663 gtggaatgagggctctatttataggt 68638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 74855 - 74731
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  74855 gagggagaagaaaagaatagcttgtcaacacaagctaaaa-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 74757  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  74756 gtggaatgagggctctatttataggt 74731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 9524871 - 9524995
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  9524871 gagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 9524969  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
     | ||||||| |||||||| ||||||    
T  9524970 atggaatgagggctctatttataggt 9524995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 8154098 - 8154222
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataactttt-ggtgtgtcaaattgt 257  Q
    ||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||    |||||||||||| ||||||| |||||||||||||||    
T  8154098 agggagaagaaaagaatagttcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtcaaattgt 8154196  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  8154197 gtggaatgagggctctatttataggt 8154222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 37468635 - 37468475
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||  |  ||||| |||||| |||||||||||||| |||||||    
T  37468635 gagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaattcaagagaacttttggtgtgtgaaattgt 37468537  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||   ||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  37468536 gtggaatgatgactctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 37468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 9554546 - 9554671
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa-gttgg--gacaactcaagataacttttggtgtgtcaaattg 256  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||    |||||||||||| |||||||||||||| ||||||    
T  9554546 gagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaaagttctttgacaactcaagagaacttttggtgtgtgaaattg 9554644  T
Q  257 tgtcgaatgagagctctattgataggt 283  Q
    | | ||||||| |||||||| ||||||    
T  9554645 tatggaatgagggctctatttataggt 9554671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 16030771 - 16030895
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||  |  |||||||||||  |||||||||||||| ||||| |    
T  16030771 gagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagtgaacttttggtgtgtaaaatttt 16030869  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    ||  |||||| |||||||| ||||||    
T  16030870 gtgaaatgagggctctatttataggt 16030895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 339
Target Start/End: Original strand, 44362982 - 44363162
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |  || ||||||| | ||||||||||||||      |     
T  44362982 gagggagaagaaaataatagctcgtcaacacaagctaaatgagggagaagagagaaaagttatttga-aactcaatagaacttttggtgtgtgttgaaga 44363080  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatg 339  Q
    || ||||||||||| |||| ||||||    | |||||||| ||||||||| | |||||||  |||||||||| |||||||||    
T  44363081 gtggaatgagagctatatttataggtgaggaggttgatgaaaatggaaaactagtttaatagattttgatggggattgaatg 44363162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 17934677 - 17934557
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtc 260  Q
    ||||||||||| ||||||||||||||||||| ||||    ||||||||||||||||||    |||||||||||| |||||||||||||| |||||||||     
T  17934677 ggagaagaaaagaatagctcgtcaacacaaggtaaata--ggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtaaaattgtgtg 17934580  T
Q  261 gaatgagagctctattgataggt 283  Q
    ||||||| |||||||| ||||||    
T  17934579 gaatgagggctctatttataggt 17934557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 26386165 - 26386287
Alignment:
Q  162 gggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgt 259  Q
    |||||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||    |||||||||||| || ||||||||||| |||||||||    
T  26386165 gggagaagaaaagaataggtcgttaacacaagctaaat-agggagaagagagaaaagttatttgacaactcaagagaatttttggtgtgtgaaattgtgt 26386263  T
Q  260 cgaatgagagctctattgataggt 283  Q
     ||||||||| |||||| ||||||    
T  26386264 ggaatgagagttctatttataggt 26386287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 283
Target Start/End: Original strand, 14887501 - 14887608
Alignment:
Q  176 atagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcgaatgagagctct 273  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    |||||||||||| |||||||||||||| ||||||||| ||||||| | |||    
T  14887501 atagctcgtcaacacaagctaa--gagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggttct 14887598  T
Q  274 attgataggt 283  Q
    ||| ||||||    
T  14887599 atttataggt 14887608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 48435508 - 48435405
Alignment:
Q  115 actatgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagaga 214  Q
    |||||||||||||||||||||| |||||| ||||||||       ||| |||  ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  48435508 actatgaccttaagaacactctttaaatctgaagggacataaaaagagagag--gaaaagaatagcttgtcaacacaagctaaaggagggagaagagaga 48435411  T
Q  215 aaagtt 220  Q
    ||||||    
T  48435410 aaagtt 48435405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 16815311 - 16815415
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtc 260  Q
    ||||||||||| ||||||||||||||||||||||||    ||||||||||||||||||    |||||||||||| |||||||||||||| |||||||||     
T  16815311 ggagaagaaaagaatagctcgtcaacacaagctaaata--ggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtg 16815408  T
Q  261 gaatgag 267  Q
    |||||||    
T  16815409 gaatgag 16815415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 248
Target Start/End: Original strand, 14397945 - 14398131
Alignment:
Q  61 aactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnnnnng 160  Q
    ||||||||||||||||||||| ||||||  |||  ||||||||| ||| || || ||||||||||||||||   || | |||||||| ||||       |    
T  14397945 aactatgttcttaagaccattcttaattttgaaaggacattatagaccgaagggtctatgaccttaagaac---cttttaatccgaaaggacagaaaaag 14398041  T
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtg 248  Q
    | ||||||||||| ||||| | ||||||| ||||||||  ||||||||||||||||| |  |  ||||||||||||||||||||| ||||    
T  14398042 atggagaagaaaagaatagttggtcaacaaaagctaaataagggagaagagagaaaaattatttgacaactcaagataacttttgatgtg 14398131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 41015962 - 41015838
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  ||||||    
T  41015962 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgt 41015864  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  41015863 gtggtatgagggctctatttataggt 41015838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 48435552 - 48435494
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaaga 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  48435552 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgaccttaaga 48435494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 41007183 - 41007058
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataactttt--ggtgtgtcaaattg 256  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| |||||||  |||||||  |||||    
T  41007183 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttgggtgtgtgtaattg 41007085  T
Q  257 tgtcgaatgagagctctattgataggt 283  Q
    ||| | ||||| |||||||| ||||||    
T  41007084 tgtggtatgagggctctatttataggt 41007058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 12558458 - 12558353
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtg 258  Q
    ||||||||||||| ||||||| || |||||||| ||||| ||||||||||||||||||||    |||||||||||| |||||||||||| | ||||||||    
T  12558458 agggagaagaaaagaatagcttgttaacacaagttaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtctgaaattgtg 12558360  T
Q  259 tcgaatg 265  Q
    | |||||    
T  12558359 tggaatg 12558353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 758011 - 757897
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaacc---aaatggactatgaccttaagaacact 134  Q
    ||||||||| |  ||| |||||| |||||||| ||||||||||| |||||||||||| |||||||  ||||   ||| ||||||||  ||||||||||||    
T  758011 gaagggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacatta--aaccgaaaaagggactatggtcttaagaacact 757914  T
Q  135 ctctaaatccgaagggac 152  Q
    || |||||||||||||||    
T  757913 ct-taaatccgaagggac 757897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 23661099 - 23660997
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatg-gactatgaccttaagaacactctctaaatccgaa 147  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| || | ||| | |||||||  |||||||||||||| ||||||||||    
T  23661099 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta-aaccgaaaagcgactatggtcttaagaacactct-taaatccgaa 23661002  T
Q  148 gggac 152  Q
    |||||    
T  23661001 gggac 23660997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 23665758 - 23665656
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatg-gactatgaccttaagaacactctctaaatccgaa 147  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| || | ||| | |||||||  |||||||||||||| ||||||||||    
T  23665758 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta-aaccaaaaagcgactatggtcttaagaacactct-taaatccgaa 23665661  T
Q  148 gggac 152  Q
    |||||    
T  23665660 gggac 23665656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 24038006 - 24037904
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatg-gactatgaccttaagaacactctctaaatccgaa 147  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| || | ||| | |||||||  |||||||||||||| ||||||||||    
T  24038006 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta-aaccgaaaagcgactatggtcttaagaacactct-taaatccgaa 24037909  T
Q  148 gggac 152  Q
    |||||    
T  24037908 gggac 24037904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 35491630 - 35491520
Alignment:
Q  177 tagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac--ttttggtgtgtcaaattgtgtcgaatgagagctc 272  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |  ||||||| |||  |||  ||||||||| | ||||||||| ||||||  ||||    
T  35491630 tagctcgtcaacacaagctaaatgagggagaagagagaaaagttctttgacaacttaagtgaacttttttggtgtctgaaattgtgtggaatgatggctc 35491531  T
Q  273 tattgataggt 283  Q
    |||| ||||||    
T  35491530 tatttataggt 35491520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 8883613 - 8883709
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||| ||||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  8883613 cgaaggtactatgctcttaagaccatttttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 8883709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 18467676 - 18467773
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactct 136  Q
    ||||||||| |  ||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||| ||||||||||||||    
T  18467676 gaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccgaaaagggactatgatcttaagaacactct 18467773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 29350691 - 29350788
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactct 136  Q
    ||||||||| |  ||| |||||| |||||||| |||||||||||||||||||| ||| ||||||| |    ||| ||||||||| ||||||||||||||    
T  29350691 gaagggacatatattatcgaagggactatgtt-ttaagaccattattaattccaaagggacattaaaccgaaaagggactatgatcttaagaacactct 29350788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 3034086 - 3034182
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||| | ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  3034086 cgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 3034182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 3693061 - 3693157
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||| | ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  3693061 cgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 3693157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 152
Target Start/End: Complemental strand, 7570844 - 7570749
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaacc---aaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| |||||||| ||||||||||| |||||| ||||| |||||||  ||||   ||| ||||||||  |||||||||||||| |||||||||||||||    
T  7570844 aagggactatgtttttaagaccattcttaatttcgaagggacatta--aaccgaaaaagggactatggtcttaagaacactct-taaatccgaagggac 7570749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 8070121 - 8070217
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||| | ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  8070121 cgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 8070217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 8888373 - 8888454
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactct 136  Q
    |||||| |||||| ||||||||||||| |||||||||||| ||||||| |    ||| ||||||||  ||||||||||||||    
T  8888373 cgaagggactatgctcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct 8888454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 14438333 - 14438280
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  14438333 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 14438280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 27709391 - 27709444
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  27709391 atttatcgaagggactatgtttttaagaccattcttaattccgaagagacatta 27709444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 3673031 - 3673125
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| |||||| | ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  3673031 aagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 3673125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 20168886 - 20168816
Alignment:
Q  34 tttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattata 104  Q
    ||||||||||||| || |||   ||| ||||||||||||||||||||| |||||||| |||  ||||||||    
T  20168886 tttcgaagggacataaattattaaagaaactatgttcttaagaccattcttaattccaaagaaacattata 20168816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 39775347 - 39775259
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||||| ||||||||||| |||||||||||| ||||||| |  | ||| ||||||||  ||||| |||||||| ||| |||||||||||    
T  39775347 actatgtt-ttaagaccattcttaattccgaagggacattaaacccaaaagggactatggtcttaataacactct-taattccgaagggac 39775259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 35456581 - 35456541
Alignment:
Q  64 tatgttcttaagaccattattaattccgaagtgacattata 104  Q
    |||| ||||||||||||| |||||||||||| |||||||||    
T  35456581 tatgctcttaagaccattcttaattccgaagggacattata 35456541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 19950193 - 19950420
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  || |||||||| ||||||||||| |||||||||||||||||||| || ||||||||  |||||| |||||| || |||||    
T  19950193 ttaagaatactcttatttctgatgggacaaattttaccgaagggactatgttcttaagaccattctttattccgaatggacattttaaaccgaagggact 19950292  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||||||||||||||||||| |||||||||||||||       |||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  19950293 atgaccttaagaacactctttaaatccgaagggacggaaaaagagggagaggaaaagaatagctcgtcaacacaaattaaaggagggagaagagagaaaa 19950392  T
Q  218 gt--tgggacaactcaagataacttttg 243  Q
    ||  |  |||||||||||| ||||||||    
T  19950393 gttctttgacaactcaagagaacttttg 19950420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 2470350 - 2470579
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||| |||||||||||||| |||||||| || |||||||||||  ||||||||||||||||||| ||||||| |||| |||||| |||||  || |||||    
T  2470350 ttaaaaatactcttatttttgaagggacgaattttaccgaaggggctatgttcttaagaccattcttaattcagaagggacattttaaactgaagggact 2470449  T
Q  118 atgaccttaagaacactctctaaatccgaagggac-nnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaa 216  Q
    ||||||||||||||||||| |||||||||||||||        |||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  2470450 atgaccttaagaacactctttaaatccgaagggacagaaaaaagagggagaggaaaagaatagcccgtcaacacaagctaaaggagggagaagagagaaa 2470549  T
Q  217 agt--tgggacaactcaagataacttttgg 244  Q
    |||  |  ||||||||||||||||||||||    
T  2470550 agttctttgacaactcaagataacttttgg 2470579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 4544013 - 4543787
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||| ||||||  |||||||| || ||||||||||| |||||||||||||||||||| ||| |||||||| |||||| ||||||||| |||||    
T  4544013 ttaagaatacttttatttctgaagggacgaattttaccgaagggactatgttcttaagaccattctta-ttccgaagggacattttaaaccaaagggact 4543915  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||||||||||||||||||| ||| |||||| ||||       |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4543914 atgaccttaagaacactctttaagtccgaa-ggacagaaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaa 4543816  T
Q  218 gt--tgggacaactcaagataacttttgg 244  Q
    ||  |  |||||||||||| |||||||||    
T  4543815 gttctttgacaactcaagagaacttttgg 4543787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 19954647 - 19954875
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||| || ||||||||| |||||| |||||| ||  ||||    
T  19954647 ttaagaatactcttatttctgaagggacaaattttaccgaagggactatgttcttaagaccattctttattccgaagggacattttaaaccgaagagact 19954746  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||| ||||||||||||||| ||||||||||||||        |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  19954747 atggccttaagaacactctttaaatccgaagggagagaaaaagagggagaggaaaagaatagctcgtcaacacatgctaaaggagggagaagagagaaaa 19954846  T
Q  218 gt--tgggacaactcaagataacttttgg 244  Q
     |  |  |||||||||||| |||||||||    
T  19954847 attctttgacaactcaagagaacttttgg 19954875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 32007346 - 32007186
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  32007346 gagggagaagaaaagaatagctcgtcaacacaagctaaaa-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 32007248  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || |||||||||||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  32007247 gtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 32007186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 39837023 - 39837147
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| ||||||||||||||||||||||    
T  39837023 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtcaaattgt 39837121  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  39837122 gtggaatgagggctctatttataggt 39837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 32025104 - 32025228
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  32025104 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 32025202  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  32025203 gtggaatgagggctctatttataggt 32025228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 39845065 - 39845189
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  39845065 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 39845163  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  39845164 gtggaatgagggctctatttataggt 39845189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 22156439 - 22156556
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||| |||||||||| ||| |||||||    
T  22156439 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttgacaactcaagagaacttttggtatgtgaaattgt 22156537  T
Q  258 gtcgaatgagagctctatt 276  Q
    || ||||||| ||||||||    
T  22156538 gtggaatgagggctctatt 22156556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 25858721 - 25858881
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |   ||||||||||| |||||||||||||| |||||||    
T  25858721 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttaacaactcaagagaacttttggtgtgtgaaattgt 25858819  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || | ||||  |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  25858820 gtgggatgatggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 25858881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 32000377 - 32000253
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| ||||| |    
T  32000377 gagggagaagaaaagaatagctcgtcaacacaagctaaaa-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtaaaatttt 32000279  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  32000278 gtggaatgagggctctatttataggt 32000253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 244
Target Start/End: Complemental strand, 21640835 - 21640653
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnnnnnga 161  Q
    |||||||| |||||||| || ||| |||||||| |||||| ||||||||| |||||||| || ||| |||||||| |||||| ||| ||||       ||    
T  21640835 actatgttattaagaccgttctta-ttccgaag-gacattttaaaccaaagggactatggccataacaacactctataaatctgaatggacagaaaaaga 21640738  T
Q  162 gggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttgg 244  Q
    ||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||| |||||||||    
T  21640737 gggagagaaaaagaatagctcgtcaacacaagctaaatgagggagaagagagaaaagttctttgacaactcaagagaacttttgg 21640653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 160 - 334
Target Start/End: Complemental strand, 13386237 - 13386063
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||    |  |||||||||||| |||||||||||||| |||||||    
T  13386237 gagggagaagaaaagaatagctcgtcaacacaagctaaat-agtgagaagagagaaaaaaaatttgacaactcaagagaacttttggtgtgtgaaattgt 13386139  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagatt 334  Q
    |  |||||| |||| |||| ||||||    |||||||||| || |||||| ||| |||||| |||||||||| ||||    
T  13386138 gaggaatgaaagctatatttataggtgaggaagttgatgaaaagggaaaaatgg-ttaatggattttgatggtgatt 13386063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 27236072 - 27235897
Alignment:
Q  27 ctcttattttcgaagggacaaaatttaccgaaggaactat----gttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgac 122  Q
    ||||||||||| || ||  ||||||||||||||| |||||    ||||||||||  ||| |||||| |||||||||||||| |||||||  |||||||||    
T  27236072 ctcttattttcaaatgggaaaaatttaccgaagggactatatatgttcttaagataatttttaatttcgaagtgacattattaaccaaagagactatgac 27235973  T
Q  123 cttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaa 198  Q
    ||||| |||||||| || |||| |||  |        |||||||||||||| ||||||||||||||||||||||||    
T  27235972 cttaataacactctttacatccaaagaaatataaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa 27235897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 22162449 - 22162559
Alignment:
Q  164 gagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcg 261  Q
    |||||||||| ||||||||||||||||||||||||| |||   ||||||||||||||    |||||||||||| |||||||||||||| ||||||||| |    
T  22162449 gagaagaaaagaatagctcgtcaacacaagctaaag-agg---aagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtgg 22162544  T
Q  262 aatgagagctctatt 276  Q
    |||||| ||||||||    
T  22162545 aatgagggctctatt 22162559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 30938907 - 30938783
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  ||||||    
T  30938907 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgt 30938809  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  30938808 gtggtatgagggctctatttataggt 30938783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 30779299 - 30779427
Alignment:
Q  91 gaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacac 190  Q
    |||| ||||||||||||| || |||||| ||||| ||||||| | | | |||||||||||||        |||||||||||||||||| |||||||||||    
T  30779299 gaagggacattataaaccgaagggactacgacctaaagaacattatttgaatccgaagggacaaaaaat-agggagaagaaaataatatctcgtcaacac 30779397  T
Q  191 aagctaaaggagggagaagagagaaaagtt 220  Q
    ||| |||||| ||||| |||||||||||||    
T  30779398 aagttaaaggggggagtagagagaaaagtt 30779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 34517568 - 34517804
Alignment:
Q  17 attaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattata----aac-caaa 111  Q
    |||||||||||||||||||||||||||| |||||||||| |||  ||| ||||||||| ||||||| ||||  ||||| |||||||||    ||| ||||    
T  34517568 attaagaatactcttattttcgaaggga-aaaatttaccaaagagactttgttcttaaaaccattactaatatcgaagggacattatattataactcaaa 34517666  T
Q  112 tggactatgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagag 211  Q
      |||| ||  ||||| |||||||| ||||||||| |||||        | ||||||||||| |||| |||||||||||||| |||| ||| || |||||    
T  34517667 gagactctggtcttaaaaacactctttaaatccgacgggacataaaaaaaaggagaagaaaagaataactcgtcaacacaagttaaaagagagataagag 34517766  T
Q  212 agaaa--agttgggacaactcaagataacttttggtgt 247  Q
    | |||    ||  ||||||| |||||||||||||||||    
T  34517767 ataaattttttttgacaacttaagataacttttggtgt 34517804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 31449516 - 31449420
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||| ||||||||||||| |||||||||||| ||||||| |    ||||||||||||  |||||||||||||| ||| |||||||||||    
T  31449516 cgaagggactatgctcttaagaccattcttaattccgaagggacattaaaccgaaaatggactatggtcttaagaacactct-taattccgaagggac 31449420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 17026393 - 17026490
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaat--ggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| ||||||  |||||||||||| |||||||||||| |||||| |||||| |||  ||||||||  |||||||||||||| ||| |||||||||||    
T  17026393 cgaagggactatgaacttaagaccattcttaattccgaagggacatt-taaaccgaatagggactatggtcttaagaacactct-taattccgaagggac 17026490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 17556885 - 17556982
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaat--ggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| ||||||  |||||||||||| |||||||||||| |||||| |||||| |||  ||||||||  |||||||||||||| ||| |||||||||||    
T  17556885 cgaagggactatgaacttaagaccattcttaattccgaagggacatt-taaaccgaatagggactatggtcttaagaacactct-taattccgaagggac 17556982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 38181865 - 38181776
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  38181865 actatgtttttaagaccatttttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 38181776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 152
Target Start/End: Complemental strand, 15951178 - 15951084
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| |||||||| | ||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  15951178 aagggactatgttttaaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 15951084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 40125525 - 40125443
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaa-atggactatgaccttaagaacactct 136  Q
    |||||| ||||||  |||||||||||| |||||||||||| ||||||  |||| || | ||||||||  ||||||||||||||    
T  40125525 cgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaacgaatagggactatggtcttaagaacactct 40125443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 19167113 - 19167209
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| |||||||||| | ||||||||| |||||||||||| | ||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  19167113 cgaatgaactatgttttaaagaccattcttaattccgaagggtcattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 19167209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 29477982 - 29477746
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactat----gttcttaagaccattattaattccgaagtgacattataaaccaaatg 113  Q
    ||||||||| |||| |||  |||||||||||||||||| |||| |||||    ||||||||||||||| |||||||||||| || |||||||||  || |    
T  29477982 ttaagaatattcttttttctgaagggacaaaatttaccaaagggactatatatgttcttaagaccattcttaattccgaagggatattataaactgaagg 29477883  T
Q  114 gactatgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagag 213  Q
    || |||||||||||||||||||| |||||||||||||||       |||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  29477882 gattatgaccttaagaacactctttaaatccgaagggacagaaaaggagggagaagaaaagaatagctcatcaacacaagctaaaggagggagaagagag 29477783  T
Q  214 aaaagt--tgggacaactcaagataacttttggtgtg 248  Q
    ||||||  |  |||||||||||| |||||||||||||    
T  29477782 aaaagttctttgacaactcaagagaacttttggtgtg 29477746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 6898121 - 6897894
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  ||||| || || ||||||||||| |||||||||||||||||||| |||||||||||| |||||| |||||| || |||||    
T  6898121 ttaagaatactcttatttatgaaggaacgaattttaccgaagggactatgttcttaagaccattcttaattccgaagagacatt-taaaccgaagggact 6898023  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    ||||||||||||||||||| ||||| |||||||||        |||| ||  |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  6898022 atgaccttaagaacactctttaaattcgaagggacagaaaaatagggggagaaaaagaatagctcatcaacacaagctaaaggagggagaagagagaaaa 6897923  T
Q  218 gt--tgggacaactcaagataacttttgg 244  Q
    ||  |  |||||||||||| |||||||||    
T  6897922 gttctttgacaactcaagagaacttttgg 6897894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 1858024 - 1858184
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||| ||||||||| |||||||    
T  1858024 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaactgttggtgtgtgaaattgt 1858122  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || |||||||||||||||| ||||||   || ||||||| |||| |||||||||||||||||    
T  1858123 gtggaatgagagctctatttataggtgagaaggttgatgaagaaaggaaaattggtttaatg 1858184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 25832073 - 25831842
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||| ||||||||||| |||||||| |||  |||||||    ||||||| ||    
T  25832073 ttaagaatactcttattttcgaagggacaaaatttactgaagtgactatgtttttaagaccattcttaattccaaaggaacattatttctcaaatgggct 25831974  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    |||  | |||||||||||| |||||| ||  | ||       ||| |||||||||||| |||||| |||||| |||||||| || |||||||||| ||||    
T  25831973 atggtcataagaacactctttaaatctgattgtacacaaaaagagagagaagaaaatattagctcatcaacataagctaaatgaaggagaagagataaaa 25831874  T
Q  218 gt--tgggacaactcaagataacttttggtgt 247  Q
    ||  |  |||||||||||| ||||||||||||    
T  25831873 gttctttgacaactcaagagaacttttggtgt 25831842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 163 - 318
Target Start/End: Original strand, 46299378 - 46299535
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgtgtc 260  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||  |  |||||| ||||| |||||||||||||| ||||||||      
T  46299378 ggagaagaaaagaatagctcgtcaacacaagctaaatgagggagaagtgagaaaagttctttgacaacccaagagaacttttggtgtgtgaaattgtgag 46299477  T
Q  261 gaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatg 318  Q
    | |||||||||||||| ||||||    | |||||||| ||||||||||||||||||||    
T  46299478 ggatgagagctctatttataggtgaggaggttgatgaaaatggaaaattggtttaatg 46299535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 6851465 - 6851625
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    ||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||| ||||| |||||||    
T  6851465 gagggagaaaaaaaaaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttgatgtgtgaaattgt 6851563  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  6851564 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 6851625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 164 - 318
Target Start/End: Complemental strand, 28415738 - 28415582
Alignment:
Q  164 gagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcg 261  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||| | ||| ||||||||| |    
T  28415738 gagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttgatatgtgaaattgtgtgg 28415640  T
Q  262 aatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    |||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  28415639 aatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 28415582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 46461569 - 46461730
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa--gt-tgggacaactcaagataacttttggtgtgtcaaattg 256  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||  || |  |||||||||||| |||||||||||||| ||||||    
T  46461569 gagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaaaagtctttgacaactcaagagaacttttggtgtgtgaaattg 46461667  T
Q  257 tgtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    ||| ||||||| || ||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  46461668 tgtggaatgagggccctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 46461730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 44412766 - 44412927
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttg--gtgtgtcaaatt 255  Q
    |||||||||||||| |||||||||||||||||| ||| |  ||||||||||||||||| |  |  |||||||||||| ||||||||  |||||| |||||    
T  44412766 gagggagaagaaaagaatagctcgtcaacacaatctaga-tagggagaagagagaaaaattctttgacaactcaagagaacttttggtgtgtgtaaaatt 44412864  T
Q  256 gtgtcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatg 318  Q
    |||| ||||||| |||||||| |||||     | |||||||| ||||||||||||||||||||    
T  44412865 gtgtggaatgagggctctatttataggcgaggaggttgatgaaaatggaaaattggtttaatg 44412927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 18303843 - 18303967
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| ||||||||| | |||||||    
T  18303843 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtctgaaattgt 18303941  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  18303942 gtggaatgagggctctatttataggt 18303967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 34138597 - 34138687
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgt 249  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||| | ||||||||||||||    
T  34138597 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgtgt 34138687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 12979080 - 12978956
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  ||||||    
T  12979080 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgt 12978982  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  12978981 gtggtatgagggctctatttataggt 12978956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 13832103 - 13831979
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  ||||||    
T  13832103 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgt 13832005  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  13832004 gtggtatgagggctctatttataggt 13831979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 20542355 - 20542478
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||| ||||||||||||||||||  || ||||||||||||||||  |  |||||||| ||| |||||||||| ||| |||||||    
T  20542355 gagggagaagaaaagaataggtcgtcaacacaagctaaa-tagagagaagagagaaaagttctttgacaactc-agagaacttttggtatgtgaaattgt 20542452  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  20542453 gtggaatgagggctctatttataggt 20542478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 34132285 - 34132372
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtg 246  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||| | |||||||||||    
T  34132285 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttgacaactcaatagaacttttggtg 34132372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 23615979 - 23615846
Alignment:
Q  83 ttaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctc 182  Q
    |||||||||||| ||||||||||||  || |||| ||| |||||||| |||||| | |||||  |||||        |||||||| ||||| ||||| ||    
T  23615979 ttaattccgaagggacattataaactgaagggacaatggccttaagaccactctttgaatccatagggatagaaaaagagggagatgaaaagaatagttc 23615880  T
Q  183 gtcaacacaagctaaaggagggagaagagagaaa 216  Q
    |||||||||||||||| |||||||||||||||||    
T  23615879 gtcaacacaagctaaatgagggagaagagagaaa 23615846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 283
Target Start/End: Complemental strand, 13840129 - 13840009
Alignment:
Q  165 agaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgtgtcg 261  Q
    ||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  |||||||| |    
T  13840129 agaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgtgtgg 13840031  T
Q  262 aatgagagctctattgataggt 283  Q
     ||||| |||||||| ||||||    
T  13840030 tatgagggctctatttataggt 13840009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 1288924 - 1288729
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttacc-gaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggac 116  Q
    |||| ||||||||||||||  |||||||||| |||  | ||||| | |||| ||||||||||||||||||||| |||| |||||||||   | || ||||    
T  1288924 ttaaaaatactcttatttttaaagggacaaagttttgctgaagggattatgctcttaagaccattattaattctgaag-gacattatatctcgaagggac 1288826  T
Q  117 tatgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaa 215  Q
    || |  |||||||||||||| ||||| ||| ||||         ||||||||||||  ||||| | ||||||||||||| |||||||||||||||||||    
T  1288825 taagttcttaagaacactctttaaatacgacgggatataaaa--agggagaagaaatgaatagtttgtcaacacaagctgaaggagggagaagagagaa 1288729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 43005119 - 43005208
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa-gttgg--gacaactcaagataacttttggtgt 247  Q
    |||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||| |||    |||||||||||| ||||||||||||    
T  43005119 gagggagaagaaaagaataactcgtcaacacaagctaaat-agggagaagagagaaaaagttctttgacaactcaagagaacttttggtgt 43005208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 16372864 - 16372913
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattata 104  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  16372864 cgaagggactatgttcttaagaccattcttaattccgaagggacattata 16372913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 320
Target Start/End: Original strand, 4831839 - 4831960
Alignment:
Q  201 agggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtcgaatgagagctctattgataggtttaaaagttgatgag 298  Q
    ||||||||||||||||||||    |||||||||||| |||||||||||| | ||||||||  | ||||  |||||||| |||| |    | |||||| |     
T  4831839 agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtctgaaattgtgagggatgatggctctatttatagatgaggaggttgataaa 4831938  T
Q  299 aatggaaaattggtttaatgaa 320  Q
    ||||||||||||||||||||||    
T  4831939 aatggaaaattggtttaatgaa 4831960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 32158556 - 32158598
Alignment:
Q  178 agctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  32158556 agctcgtcaacacaagctgaaggagggagaagagaaaaaagtt 32158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 1288996 - 1288937
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaa-atttaccgaaggaactatgttcttaaga 76  Q
    |||| ||||||||||||||||||||||||||  |||| |||||| |||||| ||||||||    
T  1288996 ttaaaaatactcttattttcgaagggacaaagttttagcgaagggactatgctcttaaga 1288937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 4333486 - 4333400
Alignment:
Q  19 taagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataa 105  Q
    |||||||||| ||||||| ||||||||||||||||| ||| | |||||| | |||| ||||   |||||||  ||| ||||||||||    
T  4333486 taagaatacttttatttttgaagggacaaaatttactgaatggactatgatattaaaaccacacttaattctaaagggacattataa 4333400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 4337733 - 4337647
Alignment:
Q  19 taagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataa 105  Q
    |||||||||| ||||||| ||||||||||||||||| ||| | |||||| | |||| ||||   |||||||  ||| ||||||||||    
T  4337733 taagaatacttttatttttgaagggacaaaatttactgaatggactatgatattaaaaccacacttaattctaaagggacattataa 4337647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 4930682 - 4930770
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaacc---aaatggactatgaccttaagaacactct 136  Q
    ||||| |||||| |||||||| ||||||||||| |||||| ||||| |||||||  ||||   ||| ||||||||  ||||||||||||||    
T  4930682 atttatcgaagggactatgtttttaagaccattcttaatttcgaagggacatta--aaccgaaaaagggactatggtcttaagaacactct 4930770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 8268743 - 8268808
Alignment:
Q  37 cgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    |||||||||| |  ||| |||| | |||||||| ||||||||||| |||||||||||| |||||||    
T  8268743 cgaagggacatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacatta 8268808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 2595296 - 2595336
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacatta 102  Q
    |||||||| ||||||||||| |||||||||||| |||||||    
T  2595296 actatgtttttaagaccattcttaattccgaagggacatta 2595336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 14104965 - 14105186
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||| |||||| |||||| || ||       
T  14104965 ttaagaatactcttatttctgaagggacgaaatttaccgaagggactatgttcttaagaccattcttaattccaaagggacattttaaaccgaaggg--- 14105061  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
        ||||||||||||||| |||||| ||||||||       |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  14105062 ----ccttaagaacactctttaaatctgaagggacagaaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagagagaagagagaaaa 14105157  T
Q  218 gt--tgggacaactcaagataacttttgg 244  Q
    ||  |  |||||||||||| |||||||||    
T  14105158 gttatttgacaactcaagagaacttttgg 14105186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 5870561 - 5870721
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  5870561 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 5870659  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || |||||||||||||||| ||||||  | | ||||||| |||| |||||||||||||||||    
T  5870660 gtggaatgagagctctatttataggtgaagaggttgatgaagaaaggaaaattggtttaatg 5870721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 5873703 - 5873863
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  5873703 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 5873801  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || |||||||||||||||| ||||||  | | ||||||| |||| |||||||||||||||||    
T  5873802 gtggaatgagagctctatttataggtgaagaggttgatgaagaaaggaaaattggtttaatg 5873863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 42565389 - 42565513
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  42565389 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 42565487  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  42565488 gtggaatgagggctctatttataggt 42565513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 42574013 - 42574137
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  42574013 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 42574111  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  42574112 gtggaatgagggctctatttataggt 42574137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 17739 - 17898
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||    |||||||||| | |||||||||||||| |||||||    
T  17739 gagggagaagaaaagaatagctcgtcaacacaagctaa--gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgtgtgaaattgt 17836  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  17837 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 17898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 38083974 - 38084098
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |   ||||||||||| |||||||||||||| |||||||    
T  38083974 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttcttttacaactcaagagaacttttggtgtgtgaaattgt 38084072  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  38084073 gtggaatgagggctctatttataggt 38084098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 62 - 249
Target Start/End: Complemental strand, 17255053 - 17254865
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnnnnnga 161  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||| || ||||||||||||||||||||   | | |||| ||||||||       ||    
T  17255053 actatgttcttaagaccattcttaatttcgaagggacattataaaccgaagggactatgaccttaagaacaacattttaatcagaagggacagaaaaaga 17254954  T
Q  162 gggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaag--ttgggacaactcaagataacttttggtgtgt 249  Q
    |||| || |||| ||||||||||||||||||| |||| |||||||||||||||||||   |  | |||||||||| ||||||||||||||    
T  17254953 ggga-aaaaaaagaatagctcgtcaacacaagataaatgagggagaagagagaaaagatctttgtcaactcaagagaacttttggtgtgt 17254865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 18500837 - 18500722
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  18500837 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 18500739  T
Q  258 gtcgaatgagagctcta 274  Q
    || ||||||| ||||||    
T  18500738 gtggaatgagggctcta 18500722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 15943998 - 15944122
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||| ||||||||||||||  ||||||    
T  15943998 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgcaattgt 15944096  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  15944097 gtggtatgagggctctatttataggt 15944122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 15952513 - 15952637
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||| ||||||||||||||  ||||||    
T  15952513 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgt 15952611  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  15952612 gtggtatgagggctctatttataggt 15952637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 44957229 - 44957069
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnn 156  Q
    |||| ||||| || |||||| |||| ||| |||||||| ||||||||| ||| ||  || |||||||||||||||||||| | ||||||||||||         
T  44957229 aagggactatattattaagatcattcttatttccgaagggacattatataccgaagagattatgaccttaagaacactctttcaatccgaagggatagaa 44957130  T
Q  157 nnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
        |||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  44957129 aataagggggaagaaaagaatagctcgtcaagacaagctaaaggagggagaagagagaaaa 44957069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 11874307 - 11874183
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||  |  |||||||||||| ||||||| |||||| |||||||    
T  11874307 gagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttgtgtgtgaaattgt 11874209  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||| ||| ||||||    
T  11874208 gtggaatgagggctccatttataggt 11874183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 35139218 - 35139094
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||    |||||||||||| ||||||||||||||  ||||||    
T  35139218 gagggagaagaaaagaatagctcgtcaacacaagttaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgt 35139120  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  35139119 gtggtatgagggctctatttataggt 35139094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 35147554 - 35147430
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||    |||||||||||| ||||||||||||||  ||||||    
T  35147554 gagggagaagaaaagaatagctcgtcaacacaagttaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgt 35147456  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  35147455 gtggtatgagggctctatttataggt 35147430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 160 - 343
Target Start/End: Original strand, 45031672 - 45031855
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtca-aattg 256  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||  |  |||||||||||| ||||||| || ||| | || ||    
T  45031672 gagggataagaaaagaatagctcgtcaacacaagttaaaggagggagaagagataaaggttctttgacaactcaagagaactttttgtctgttataaatg 45031771  T
Q  257 tgtcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatgtgat 343  Q
     |  |||||| ||||||||| ||||||| ||| |||||||| ||||||| |||| ||| ||| |||||||||| |||||||||||||    
T  45031772 ag--gaatgatagctctatttataggttcaaatgttgatgaaaatggaatattgattt-atggattttgatggggattgaatgtgat 45031855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 163 - 318
Target Start/End: Original strand, 19883893 - 19884049
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgtc 260  Q
    ||||| ||||| ||||||||||||||||||  ||||  |||||||||||||| |||||    |||||||||| | |||||||||||||| ||||| |||     
T  19883893 ggagaggaaaagaatagctcgtcaacacaaaataaat-agggagaagagagagaagttctttgacaactcaaaagaacttttggtgtgtgaaattttgtg 19883991  T
Q  261 gaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatg 318  Q
    |||||||||||||||| ||||||    | |||||||| ||||||||||||||||||||    
T  19883992 gaatgagagctctatttataggtgaggaggttgatgaaaatggaaaattggtttaatg 19884049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 24690705 - 24690581
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| || ||||||||||| |||||||||  ||||||||||||||||||||    |||||||||||| ||||||| |||||| |||||||    
T  24690705 gagggagaagaaaagaaaagctcgtcaacgcaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaactttttgtgtgtgaaattgt 24690607  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  24690606 gtggaatgagggctctatttataggt 24690581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 40386556 - 40386616
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40386556 gagggagaagagaataatagctcgtcaacacaagctaaatgagggagaagagagaaaagtt 40386616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 18972553 - 18972675
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||| ||||||||| |||||  |||||||||||||||||||  |  |||||||||||| ||||||||  ||||||||||||    
T  18972553 gagggagaagaaaagaatagctcatcaacacaaactaaa-tagggagaagagagaaaagttctttgacaactcaagagaacttttg--gtgtcaaattgt 18972649  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||  |||||||| ||||||    
T  18972650 gtggaatgaaggctctatttataggt 18972675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 41233284 - 41233408
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||| | |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| |||||||||||  ||||||    
T  41233284 agggagaagaaaagaatagctcattaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgtaattgt 41233382  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  41233383 gtggtatgagggctctatttataggt 41233408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 1934628 - 1934526
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatg-gactatgaccttaagaacactctctaaatccgaa 147  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| ||||| | || | ||| | |||||||  |||||||||||||| ||||||||||    
T  1934628 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatga-aaccgaaaagcgactatggtcttaagaacactct-taaatccgaa 1934531  T
Q  148 gggac 152  Q
    |||||    
T  1934530 gggac 1934526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 318
Target Start/End: Complemental strand, 36735871 - 36735775
Alignment:
Q  223 gacaactcaagataacttttggtgtgtcaaattgtgtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    |||||||||||| |||||||||| ||| |||||||||  |||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  36735871 gacaactcaagagaacttttggtatgtgaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 36735775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 31327198 - 31327264
Alignment:
Q  34 tttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatt 101  Q
    ||||||||||||| |  ||| ||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  31327198 tttcgaagggacatatattatcgaaggaactatgtt-ttaagaccattcttaattccgaagggacatt 31327264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 9185053 - 9185000
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  9185053 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 9185000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 29678223 - 29678305
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaat--ggactatgaccttaagaacactct 136  Q
    |||||||||||||  |||||||||||| ||||||||||||  ||||| |||||| |||  ||||||||  ||||||||||||||    
T  29678223 cgaaggaactatgaacttaagaccattcttaattccgaaggaacatt-taaaccgaatagggactatggtcttaagaacactct 29678305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 30651383 - 30651465
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaat--ggactatgaccttaagaacactct 136  Q
    |||||| ||||||  |||||||||||| |||||||||||| |||||| |||||| |||  ||||||||  ||||||||||||||    
T  30651383 cgaagggactatgaacttaagaccattcttaattccgaagggacatt-taaaccgaatagggactatggtcttaagaacactct 30651465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 17879783 - 17879720
Alignment:
Q  281 ggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatgtgata 344  Q
    |||| ||| |||||||| |||| ||||||||||||||||||||| |||  ||||||| ||||||    
T  17879783 ggttcaaaggttgatgaaaatgaaaaattggtttaatgaattttaatgaggattgaaagtgata 17879720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 17968619 - 17968494
Alignment:
Q  25 tactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgacct 124  Q
    |||||||  ||| ||||||||| |  ||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  ||    
T  17968619 tactctttattttgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtct 17968521  T
Q  125 taagaacactctctaaatccgaagggac 152  Q
    |||||||||| | ||| |||||||||||    
T  17968520 taagaacact-tttaattccgaagggac 17968494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 9180362 - 9180262
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatg-gactatgaccttaagaacactctctaaatccgaa 147  Q
    ||||| |||||| ||||| || ||||||||||| |||||||||||| ||||||| || | ||| | |||||||  |||||||||||||| ||| ||||||    
T  9180362 atttatcgaagggactatttttttaagaccattcttaattccgaagggacatta-aaccgaaaagcgactatggtcttaagaacactct-taattccgaa 9180265  T
Q  148 ggg 150  Q
    |||    
T  9180264 ggg 9180262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 25496968 - 25496856
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctc 137  Q
    ||||||||| |  ||| |||||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| |||||| |  ||||||||||||||     
T  25496968 gaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccgaaaagggactaaggtcttaagaacactct- 25496871  T
Q  138 taaatccgaagggac 152  Q
    ||| |||||||||||    
T  25496870 taattccgaagggac 25496856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 38427093 - 38427024
Alignment:
Q  34 tttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattata 104  Q
    ||||||||||||| || ||| ||||||||| ||| ||| || |||||| |||||||||||| |||||||||    
T  38427093 tttcgaagggacataaattatcgaaggaaccatgctctaaa-accatttttaattccgaagggacattata 38427024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 41558640 - 41558606
Alignment:
Q  178 agctcgtcaacacaagctaaaggagggagaagaga 212  Q
    ||||| |||||||||||||||||||||||||||||    
T  41558640 agctcatcaacacaagctaaaggagggagaagaga 41558606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 25477940 - 25477877
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    ||||||||| |  ||| |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  25477940 gaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacatta 25477877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 171434 - 171207
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    |||| |||||||||||||  ||||||||||| |||| |||||| |||| ||||||||||||||| |||||||||||| |||| | |||||| || |||||    
T  171434 ttaaaaatactcttatttctgaagggacaaa-tttatcgaagggactacgttcttaagaccattcttaattccgaagggacaatttaaaccgaagggact 171336  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
     |  ||||||||||||||| |||||||||| ||||       |||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  171335 gtagccttaagaacactctttaaatccgaaaggacagaaaaagagggagaggaaaagaatagctcgtcaacatatgctaaaggagggagaagagagaaaa 171236  T
Q  218 gt--tgggacaactcaagataacttttgg 244  Q
    ||  |  ||||||||||||||||||||||    
T  171235 gttctttgacaactcaagataacttttgg 171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 1e-45; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 18265225 - 18265036
Alignment:
Q  18 ttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggact 117  Q
    ||||||||||||||||||  |||||||| || ||||||||||| |||||||||||||||||||| || ||| |||||  ||||| |||||| || |||||    
T  18265225 ttaagaatactcttatttctgaagggacgaattttaccgaagggactatgttcttaagaccattctt-atttcgaaggaacattttaaaccgaagggact 18265127  T
Q  118 atgaccttaagaacactctctaaatccgaagggacnnnnnnngagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaa 208  Q
    | | ||||||||||||||| |||||||||||||||       |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18265126 agggccttaagaacactctttaaatccgaagggacagaaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagaa 18265036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 160 - 320
Target Start/End: Complemental strand, 36448860 - 36448698
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  36448860 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 36448762  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||||    
T  36448761 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaa 36448698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 162 - 318
Target Start/End: Complemental strand, 37048971 - 37048813
Alignment:
Q  162 gggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtgt 259  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||||    
T  37048971 gggagaagaaaagaatagctcgttaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgt 37048873  T
Q  260 cgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
     |||||||||||||||| ||||||   || ||||||| |||| |||||||||||||||||    
T  37048872 ggaatgagagctctatttataggtgagaaggttgatgaagaaaggaaaattggtttaatg 37048813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 25526796 - 25526636
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  25526796 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 25526698  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  25526697 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 25526636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 25533478 - 25533318
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  25533478 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 25533380  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  25533379 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 25533318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 40015507 - 40015383
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||||||||||||||||||||||| |||||||    
T  40015507 gagggagaagaaaataatagctcgtcaacacaagctaaat-agggagaagagagaaaagttatttgacaactcaagataacttttggtgtgtgaaattgt 40015409  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  40015408 gtggaatgagggctctatttataggt 40015383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 20639315 - 20639475
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    ||||| |||||| |||||||||||||| |||||||    
T  20639315 gagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaattcaagagaacttttggtgtgtgaaattgt 20639413  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || |||||||||||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  20639414 gtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 20639475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 28844545 - 28844421
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  28844545 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 28844447  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  28844446 gtggaatgagggctctatttataggt 28844421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 28853155 - 28853031
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  28853155 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 28853057  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  28853056 gtggaatgagggctctatttataggt 28853031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 36455244 - 36455120
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  36455244 gagggagaagaaaagaatagctcgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 36455146  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  36455145 gtggaatgagggctctatttataggt 36455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 20092223 - 20092384
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||  |  |||||||||| | ||||||||||| || |||||||    
T  20092223 gagggagaagaaaagaatagctcgtcaacacaagctaa--gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgcgtgaaattgt 20092320  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||||    
T  20092321 gtggaatgagggctctatttataggtgaggaggttgatgtaaaatggaaaattggtttaatgaa 20092384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 24956290 - 24956414
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||| ||||||||||||||  ||||||    
T  24956290 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgt 24956388  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  24956389 gtggtatgagggctctatttataggt 24956414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 24964750 - 24964874
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||| ||||||||||||||  ||||||    
T  24964750 gagggagaagaaaagaatagctcgtcaacacaagctaaa-gagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgt 24964848  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || | ||||| |||||||| ||||||    
T  24964849 gtggtatgagggctctatttataggt 24964874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 25041719 - 25041843
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  25041719 gagggagaagaaaagaatagcttgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 25041817  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || |||||| ||||||||| ||||||    
T  25041818 gtggaatgatagctctatttataggt 25041843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 26186100 - 26186260
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |  |  |||||||||||| |||||||||||||| |||||||    
T  26186100 gagggagaagaaaagaatagctcgtcaacacaagctaaa-aagggagaagagagaaaaattctttgacaactcaagagaacttttggtgtgtgaaattgt 26186198  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| | |||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  26186199 gtggaatgagggttctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 26186260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 30249930 - 30249806
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  30249930 gagggagaagaaaagaatagctcgtcaacacaagctaa-gtagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 30249832  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || |||| || |||||||| ||||||    
T  30249831 gtggaataagggctctatttataggt 30249806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 20099100 - 20099261
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||  |  |||||||||| | ||||||||||| || |||||||    
T  20099100 gagggagaagaaaagaatagctcgtcaacacaagctaa--gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgcgtgaaattgt 20099197  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    || ||||||| |||||||| ||||||    | ||||||| | |||||||||||| |||||||||    
T  20099198 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattgatttaatgaa 20099261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 23377752 - 23377913
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||    |||||||||| | |||||||||||| | |||||||    
T  23377752 gagggagaagaaaagaatagctcgtcaacacaaactaa--gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgtctgaaattgt 23377849  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||||    
T  23377850 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaa 23377913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 1727618 - 1727742
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataactttt-ggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||||||| |||||||||||||||    
T  1727618 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaacttttcggtgtgtcaaattgt 1727716  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  1727717 gtggaatgagggctctatttataggt 1727742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 15956448 - 15956608
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||| |||||||||||||  |||||||||||| |||||||    |||||||||||| |||||||||||||| |||||||    
T  15956448 gagggagaagaaaagaatagctcgttaacacaagctaaat-agggagaagagataaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 15956546  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||  |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  15956547 gtggaatgaaggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 15956608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 10058385 - 10058265
Alignment:
Q  166 gaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgtgtcga 262  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||| | ||| ||||||||||| ||||||||| ||    
T  10058385 gaagaaaagaatagctcgtcaacacaagctaaatgagggagaagagagaaaagttctttgacaactcaatagaactttttggtgtgtgaaattgtgtgga 10058286  T
Q  263 atgagagctctattgataggt 283  Q
    ||||| |||||||| ||||||    
T  10058285 atgagggctctatttataggt 10058265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 43597505 - 43597629
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| ||||||||||| |||||||    
T  43597505 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgaaattgt 43597603  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  43597604 gtggaatgagggctctatttataggt 43597629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 43630299 - 43630423
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgt 257  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| ||||||||||| |||||||    
T  43630299 agggagaagaaaagaatagctcgttaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtgaaattgt 43630397  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  43630398 gtggaatgagggctctatttataggt 43630423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 15590984 - 15591109
Alignment:
Q  26 actcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgacctt 125  Q
    ||||||||||||||| ||  |||||||| |||||  ||||| ||||||| || ||| ||||| |||||| ||||||||||||  ||||||||||||| ||    
T  15590984 actcttattttcgaaagggaaaaatttatcgaagtgactatcttcttaaaactattcttaataccgaagggacattataaactgaatggactatgacgtt 15591083  T
Q  126 aagaacactctctaaatccgaaggga 151  Q
    ||||||||||| | ||| ||||||||    
T  15591084 aagaacactctttcaattcgaaggga 15591109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 23349531 - 23349657
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattg 256  Q
    |||||||| ||||| |||||||||| |||||||||||||  ||||||||||||||||| |  |  |||||||||||| ||| ||||||||||| ||||||    
T  23349531 gagggagaggaaaagaatagctcgttaacacaagctaaaatagggagaagagagaaaaattctttgacaactcaagagaactttttggtgtgtgaaattg 23349630  T
Q  257 tgtcgaatgagagctctattgataggt 283  Q
    ||| ||||||  |||||||| ||||||    
T  23349631 tgtggaatgatggctctatttataggt 23349657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 1285832 - 1285775
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||    
T  1285832 ggagaagaaaagaatagctcgtcaacgcaagttaaaggagggagaagagataaaagtt 1285775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 557141 - 557235
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  557141 aagggactatgttcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 557235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 561913 - 562007
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  561913 aagggactatgttcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 562007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 16563828 - 16563771
Alignment:
Q  163 ggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    ||||| ||||| ||||| |||||||||||||||||  |||||||||||||||||||||    
T  16563828 ggagaggaaaagaatagttcgtcaacacaagctaatagagggagaagagagaaaagtt 16563771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 36941916 - 36941820
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||| | ||||||||||| |||||||||||| ||||||| |    ||| ||||||||| |||||||||||||| ||| |||||||||||    
T  36941916 cgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatgatcttaagaacactct-taattccgaagggac 36941820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 36429186 - 36429274
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||||| ||||||||||| |||||||||||| ||||||| ||   ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  36429186 actatgtt-ttaagaccattcttaattccgaagggacattaaaacgaaaagggactatggtcttaagaacactct-taattccgaagggac 36429274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 7452215 - 7452268
Alignment:
Q  49 atttaccgaaggaactatgttcttaagaccattattaattccgaagtgacatta 102  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||| |||||||    
T  7452215 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 7452268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 13359003 - 13358958
Alignment:
Q  169 gaaaataatagctcgtcaacacaagctaaaggagggagaagagaga 214  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||    
T  13359003 gaaaagaatagctcgtcaacacaagctaaaggagaaagaagagaga 13358958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 37248447 - 37248333
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaacc---aaatggactatgaccttaagaacact 134  Q
    ||||||||| |  ||| |||||| |||||||| |||||| |||| ||||||| |||| |||||||  ||||   ||| ||||||||  ||||||||||||    
T  37248447 gaagggacatatattatcgaagggactatgtttttaagatcattcttaattctgaagggacatta--aaccgaaaaagggactatggtcttaagaacact 37248350  T
Q  135 ctctaaatccgaagggac 152  Q
    || |||||||||||||||    
T  37248349 ct-taaatccgaagggac 37248333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 39518864 - 39518946
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaat--ggactatgaccttaagaacactct 136  Q
    |||||| ||||||  |||||||||||| |||||||||||| |||||| |||||| |||  ||||||||  ||||||||||||||    
T  39518864 cgaagggactatgaacttaagaccattcttaattccgaagggacatt-taaaccgaatagggactatggtcttaagaacactct 39518946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 39523503 - 39523585
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaat--ggactatgaccttaagaacactct 136  Q
    |||||| ||||||  |||||||||||| |||||||||||| |||||| |||||| |||  ||||||||  ||||||||||||||    
T  39523503 cgaagggactatgaacttaagaccattcttaattccgaagggacatt-taaaccgaatagggactatggtcttaagaacactct 39523585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 26667744 - 26667837
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  26667744 aagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 26667837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 26939341 - 26939434
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||| |||||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  26939341 aagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 26939434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 16747807 - 16747718
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtg 248  Q
    ||||||||||||  ||||||||||||||||||| |||| |||  ||| ||||||||| |  |  ||||| |||||| |||||||||||||    
T  16747807 agggagaagaaatgaatagctcgtcaacacaaggtaaatgagaaagaggagagaaaaattatttgacaattcaagagaacttttggtgtg 16747718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 29167616 - 29167504
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctc 137  Q
    ||||||||| |  ||| |||||| || ||||| ||||||||||| |||||||||||| ||||||| |    ||| ||||||||  ||||||||||||||     
T  29167616 gaagggacatatattatcgaagggacaatgtt-ttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactct- 29167519  T
Q  138 taaatccgaagggac 152  Q
    ||| |||||||||||    
T  29167518 taattccgaagggac 29167504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 40148348 - 40148460
Alignment:
Q  38 gaagggacaaaatttaccgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctc 137  Q
    ||||||||| |  ||| |||||| |||||||| ||||||||||| ||||||| |||| ||||||| |    ||| ||||||||  ||||||||||||||     
T  40148348 gaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaaccgaaaagggactatggtcttaagaacactct- 40148445  T
Q  138 taaatccgaagggac 152  Q
    ||| |||||||||||    
T  40148446 taattccgaagggac 40148460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 15591116 - 15591169
Alignment:
Q  167 aagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    ||||||||||||| |||| ||||| |  |||||||||||||||||| |||||||    
T  15591116 aagaaaataatagatcgttaacacgatttaaaggagggagaagagaaaaaagtt 15591169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 23757441 - 23757392
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattata 104  Q
    |||||| |||||||| |||||||| ||  |||||||||||||||||||||    
T  23757441 cgaagggactatgtttttaagacctttcataattccgaagtgacattata 23757392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 23822897 - 23822848
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattata 104  Q
    |||||| |||||||| |||||||| ||  |||||||||||||||||||||    
T  23822897 cgaagggactatgtttttaagacctttcataattccgaagtgacattata 23822848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 41997107 - 41997143
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaa 93  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  41997107 aagggactatgttcttaagaccattattgattccgaa 41997143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 42001876 - 42001912
Alignment:
Q  57 aaggaactatgttcttaagaccattattaattccgaa 93  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  42001876 aagggactatgttcttaagaccattattgattccgaa 42001912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 62 - 339
Target Start/End: Original strand, 4695 - 4971
Alignment:
Q  62 actatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggacnnnnnnnga 161  Q
    ||||||| |||||||||||| |||||| ||||| || ||||||| || || | |||||||||||||||||||||| |||||||||||||||       ||    
T  4695 actatgtgcttaagaccatttttaatttcgaagagagattataagccgaaggaactatgaccttaagaacactctttaaatccgaagggacaaaaaaaga 4794  T
Q  162 gggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgggacaactcaagataacttttg--gtgtgtcaaattgtgt 259  Q
    |||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||| ||     |||||  || ||||||||  ||||||  |   |||     
T  4795 gggagaagaaaagaatagctcgtcaacataagctaaatgagggaaaagagagaaaaatt-ctttaactc--gagaacttttggtgtgtgtgtataagtga 4891  T
Q  260 cgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatg 339  Q
     |||||||||||||||| ||||||| ||| |||||||| ||||||||| |||||||||| |||||||||| |||||||||    
T  4892 ggaatgagagctctatttataggttcaaaggttgatgaaaatggaaaactggtttaatggattttgatggggattgaatg 4971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 89; Significance: 1e-42; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 161 - 374
Target Start/End: Complemental strand, 163965 - 163750
Alignment:
Q  161 agggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgtg 258  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    ||||||| |||| |||||||||||| |  |   |||    
T  163965 agggagaggaaaagaatagctagtcaacacaagctaaaggagggagaagagagaaaagttttttgacaacttaagagaacttttggtgtttgtataagtg 163866  T
Q  259 tcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatgtgatatgaatgatttttga 358  Q
      |||||||||||||||| |||| || ||| |||||||| ||||||||| || ||||||| ||||||| || ||||||||||||| ||||||||||||||    
T  163865 aggaatgagagctctatttatagattcaaaggttgatgaaaatggaaaactgatttaatggattttgacggggattgaatgtgatttgaatgatttttga 163766  T
Q  359 aatggggaagttgaca 374  Q
    ||  || |||||||||    
T  163765 aaaaggaaagttgaca 163750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 348
Target Start/End: Complemental strand, 148703 - 148616
Alignment:
Q  261 gaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagattgaatgtgatatgaa 348  Q
    ||||||||| |||||| ||||||| ||| |||||||| ||||||||| |||||||||| ||||||||   ||||||||||||| ||||    
T  148703 gaatgagagttctatttataggttcaaaggttgatgaaaatggaaaactggtttaatggattttgataaggattgaatgtgatttgaa 148616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 148786 - 148726
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    |||| ||| ||||| ||||| | ||||||| | ||||||||||||||| ||||||||||||    
T  148786 gaggtagaggaaaagaatagtttgtcaacatatgctaaaggagggagatgagagaaaagtt 148726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 39668 - 39827
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||  |  |||||||||||| |||||||||||||| |||||||    
T  39668 gagggagaagaaaataatagctcgtcaacacaagctaaa-catggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 39766  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatg 318  Q
    |  ||||||| |||||||| ||||||    | |||||||| ||||||||||||||||||||    
T  39767 gaggaatgagggctctatttataggtgaggaggttgatgaaaatggaaaattggtttaatg 39827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 160 - 334
Target Start/End: Original strand, 33175 - 33351
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataacttttggtgtgtcaaattgt 257  Q
    ||||| |||||||| |||| || |||||||||||||||| ||||||||||||||||||||  |  |||||||||||| |||||||||||||| |||||||    
T  33175 gagggggaagaaaagaataacttgtcaacacaagctaaatgagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 33274  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatgagaatggaaaattggtttaatgaattttgatggagatt 334  Q
    || ||||||| |||||||| ||||||    | |||||||| ||||||||| ||||||| ||  ||||||||| ||||    
T  33275 gtggaatgagggctctatttataggtgaggaggttgatgaaaatggaaaagtggtttattggtttttgatggtgatt 33351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 89323 - 89483
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| || |||||||||||||||||||||  ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  89323 gagggagaagaaaagaacagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 89421  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  89422 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 89483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 24199 - 24075
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  24199 gagggagaagaaaaaaatagctcatcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 24101  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  24100 gtggaatgagggctctatttataggt 24075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 836 - 960
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||    |||||||||||| |||||||||||||| |||||||    
T  836 gagggagaagaaaggaatagctcgtcaacacaagctaaag-agggagaagcgagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 934  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  935 gtggaatgagggctctatttataggt 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 160 - 320
Target Start/End: Complemental strand, 14713 - 14552
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||    |||||||||| | |||||||||||| | |||||||    
T  14713 gagggagaagaaaagaatagctcgtcaacacaaactaa--gagggagaagagagaaaagttctttgacaactcaatagaacttttggtgtctgaaattgt 14616  T
Q  258 gtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    || ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||||    
T  14615 gtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaa 14552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 66421 - 66260
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||||    |||||||||||| |||||||||||| | |||||||    
T  66421 gagggagaagaaaagaataactcgtcaacacaagctaaag-agggagaagagaggaaagttctttgacaactcaagagaacttttggtgtctgaaattgt 66323  T
Q  258 gtcgaatgagagctctattgataggt-ttaaaagttgatgagaa-tggaaaattggtttaatg 318  Q
    || ||||||| |||||||| ||||||   ||| |||||||| || |||||||||| |||||||    
T  66322 gtggaatgagggctctatttataggtgagaaaggttgatgaaaattggaaaattgatttaatg 66260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 9516 - 9392
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| |||||||| |||||||||||||||  ||||||||||||||||||||    |||||||||||| ||||||| ||||||||||||||    
T  9516 gagggagaagaaaagaatagctcttcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagagaacttttagtgtgtcaaattgt 9418  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    ||  ||| ||||||||||| ||||||    
T  9417 gtgaaatcagagctctatttataggt 9392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 18200 - 18307
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||| |||||||    
T  18200 gagggagaagaaaagaatagcttgtcaacacaagctaaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgt 18298  T
Q  258 gtcgaatga 266  Q
    || ||||||    
T  18299 gtggaatga 18307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 7323 - 7404
Alignment:
Q  238 cttttggtgtgtcaaattgtgtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    |||||||||||| ||||||||| ||||||| |||||||| ||||||    | ||||||| | ||||||||||||||||||||    
T  7323 cttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatg 7404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 844 - 968
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||| | || |||||||||||||||||||||  |||||||||| |||||||||    |||||||||||| ||||||| ||||||||||||||    
T  844 gagggagaagaatagaaaagctcgtcaacacaagctaaat-agggagaagaaagaaaagttctttgacaactcaagagaactttttgtgtgtcaaattgt 942  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  943 gtggaatgagggctctatttataggt 968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 32680 - 32804
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataacttttggtgtgtcaaattgt 257  Q
    |||||||||||||| || |||||||||| ||||||||||  ||||||||||||||||||||    || ||||||| | |||||||||||||| |||||||    
T  32680 gagggagaagaaaagaaaagctcgtcaagacaagctaaat-agggagaagagagaaaagttctttgataactcaaaagaacttttggtgtgtgaaattgt 32778  T
Q  258 gtcgaatgagagctctattgataggt 283  Q
    || ||||||| |||||||| ||||||    
T  32779 gtggaatgagggctctatttataggt 32804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 320
Target Start/End: Complemental strand, 16251 - 16098
Alignment:
Q  170 aaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagttgg--gacaactcaagataactttt-ggtgtgtcaaattgtgtcgaatga 266  Q
    |||| |||||||||| ||||||| |||||  ||||||||||||||||||||    |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  16251 aaaagaatagctcgttaacacaaactaaat-agggagaagagagaaaagttctttgacaactcaagagaactttttggtgtgtcaaattgtgtggaatga 16153  T
Q  267 gagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatgaa 320  Q
    | |||||||| | ||||    | ||||||| | ||||||||||||||||||||||    
T  16152 gggctctatttacaggtgaggaggttgatgaaaaatggaaaattggtttaatgaa 16098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 86211 - 86307
Alignment:
Q  223 gacaactcaagataacttttggtgtgtcaaattgtgtcgaatgagagctctattgataggtttaaaagttgatg-agaatggaaaattggtttaatg 318  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    | ||||||| |||| |||||||||||||||||    
T  86211 gacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaagaaaggaaaattggtttaatg 86307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 7082 - 7190
Alignment:
Q  178 agctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataac-ttttggtgtgtcaaattgtgtcgaatgagagctcta 274  Q
    |||||||||||||||||||||  |||||||||||||||||||  |  |||||||||||| ||| ||||||| ||| ||||||||| |||||||  |||||    
T  7082 agctcgtcaacacaagctaaaatagggagaagagagaaaagtgctttgacaactcaagagaactttttggtttgtgaaattgtgtggaatgaggactcta 7181  T
Q  275 ttgataggt 283  Q
    || ||||||    
T  7182 tttataggt 7190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 43703 - 43777
Alignment:
Q  170 aaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagt--tgggacaactcaagataactttt 242  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||| |||||||    
T  43703 aaaagaatagctcgtcaacacaagctaaatgagggagaagagagaaaagttctttgacaactcaagagaactttt 43777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 5186 - 5245
Alignment:
Q  160 gagggagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaagtt 220  Q
    |||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||| ||||    
T  5186 gagggagaagaaaataatagttcgtcaacacgagctatagg-gggagaagagagaatagtt 5245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 4529 - 4626
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaat--ggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| ||||||  |||||||||||| |||||||||||| |||||| |||||| |||  ||||||||  |||||||||||||| ||| |||||||||||    
T  4529 cgaagggactatgaacttaagaccattcttaattccgaagggacatt-taaaccgaatagggactatggtcttaagaacactct-taattccgaagggac 4626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 9532 - 9436
Alignment:
Q  55 cgaaggaactatgttcttaagaccattattaattccgaagtgacattataaaccaaatggactatgaccttaagaacactctctaaatccgaagggac 152  Q
    |||||| |||||| ||||||||||||| |||||||||||  ||||||| |    ||| ||||||||  |||||||||||||| ||| |||||||||||    
T  9532 cgaagggactatgctcttaagaccattcttaattccgaatggacattaaaccgaaaagggactatggtcttaagaacactct-taattccgaagggac 9436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 14427 - 14375
Alignment:
Q  164 gagaagaaaataatagctcgtcaacacaagctaaaggagggagaagagagaaaa 217  Q
    |||||||||| |||||||||| |||||||| ||||  |||||||||||||||||    
T  14427 gagaagaaaagaatagctcgttaacacaagttaaat-agggagaagagagaaaa 14375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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