View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1297_high_24 (Length: 433)
Name: NF1297_high_24
Description: NF1297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1297_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 30 - 419
Target Start/End: Original strand, 38961948 - 38962337
Alignment:
| Q |
30 |
atttgagctgaaatttgacattgttgtcctcccaattcctcatgattattttactggaaattctgaaaaccaaattttgtttctccttcaatgacctgca |
129 |
Q |
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| T |
38961948 |
atttgagctgaaatttgacattgttgtcttcccaattcctcatgattattttactggaaattctgaaaaccaaattttgtttctccttcaatgacctgca |
38962047 |
T |
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| Q |
130 |
tgcattattttcatcagctattacatttgatctcttttagtgaattattgttaacctctttgtaattttgtattgacctgttttaccttgaagcaatatc |
229 |
Q |
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| T |
38962048 |
tgcattattttcatcagctattacatttgatctcttttagtgaattattgttaacctctttgtaattttgtattgacctgttttaccttgaagcaatatc |
38962147 |
T |
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| Q |
230 |
tctatgcctttcatttttgtttccgatcgttccatgctagttcattagtgtgatttgctttagaatgccattcaaatgcttatgtattataatgtatagt |
329 |
Q |
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| T |
38962148 |
tgtatgcctttcatttttgtttccgatcgttccatgctagttcattagtgtgatttgctttagaatgccattcaaatgcttatgtattataatgtatagt |
38962247 |
T |
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| Q |
330 |
ttctgatctgtgtttttgcatgaacacaaacatgtggtgttaatagttacaacatttctcaataacagagtttagtttagtgtagtaagt |
419 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38962248 |
ttctgatctgtgtttttgcatgaacacaaacatgtggggttaatagttacaacatttctcaataacagagtttagtttagtgtagtaagt |
38962337 |
T |
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