View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1297_high_72 (Length: 287)

Name: NF1297_high_72
Description: NF1297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1297_high_72
NF1297_high_72
[»] chr3 (37 HSPs)
chr3 (5-221)||(25084176-25084392)
chr3 (11-125)||(53962366-53962480)
chr3 (60-144)||(25135127-25135211)
chr3 (13-131)||(55446305-55446423)
chr3 (16-134)||(55455116-55455234)
chr3 (13-134)||(48652203-48652324)
chr3 (13-128)||(3312688-3312802)
chr3 (13-142)||(30156044-30156173)
chr3 (13-134)||(31462509-31462630)
chr3 (5-125)||(2148004-2148123)
chr3 (9-144)||(4019827-4019962)
chr3 (66-144)||(53427027-53427105)
chr3 (13-134)||(33637648-33637769)
chr3 (13-126)||(50460437-50460550)
chr3 (13-76)||(4206308-4206371)
chr3 (21-108)||(33937173-33937260)
chr3 (73-134)||(1074717-1074778)
chr3 (13-134)||(4817634-4817755)
chr3 (21-134)||(49627866-49627979)
chr3 (70-134)||(4081953-4082017)
chr3 (70-134)||(11819328-11819392)
chr3 (70-134)||(36691619-36691683)
chr3 (4-92)||(41598221-41598309)
chr3 (13-76)||(54706486-54706549)
chr3 (5-79)||(3457231-3457305)
chr3 (45-91)||(8084052-8084098)
chr3 (13-131)||(34103511-34103629)
chr3 (51-128)||(39429310-39429385)
chr3 (13-83)||(48401141-48401211)
chr3 (13-83)||(48401397-48401467)
chr3 (221-258)||(25084125-25084162)
chr3 (67-144)||(53293301-53293378)
chr3 (60-120)||(7117912-7117972)
chr3 (70-134)||(36624515-36624579)
chr3 (13-133)||(43839271-43839391)
chr3 (13-105)||(44984619-44984711)
chr3 (70-134)||(53155250-53155314)
[»] chr4 (35 HSPs)
chr4 (13-156)||(6082185-6082328)
chr4 (13-156)||(5814563-5814706)
chr4 (60-144)||(41837560-41837644)
chr4 (13-108)||(39797238-39797333)
chr4 (11-141)||(29576873-29577003)
chr4 (13-134)||(26742218-26742339)
chr4 (16-134)||(12716881-12716999)
chr4 (13-134)||(22757339-22757460)
chr4 (13-134)||(26674617-26674738)
chr4 (13-134)||(51152369-51152490)
chr4 (13-134)||(7060568-7060689)
chr4 (13-134)||(7083567-7083688)
chr4 (13-134)||(36124103-36124224)
chr4 (70-134)||(30202283-30202347)
chr4 (13-105)||(31932530-31932622)
chr4 (56-106)||(45681760-45681810)
chr4 (9-90)||(3159260-3159341)
chr4 (13-134)||(23926280-23926401)
chr4 (13-134)||(38943903-38944024)
chr4 (15-88)||(55600294-55600367)
chr4 (51-100)||(56250437-56250486)
chr4 (70-142)||(13586052-13586124)
chr4 (13-145)||(22049165-22049297)
chr4 (70-134)||(24611612-24611676)
chr4 (56-108)||(37870118-37870170)
chr4 (79-134)||(29266706-29266761)
chr4 (13-107)||(477767-477861)
chr4 (16-129)||(7860958-7861069)
chr4 (13-79)||(25658476-25658542)
chr4 (13-134)||(626305-626426)
chr4 (79-144)||(12519885-12519950)
chr4 (13-86)||(24789476-24789549)
chr4 (13-86)||(24818710-24818783)
chr4 (31-144)||(31994257-31994370)
chr4 (13-82)||(53647912-53647981)
[»] chr2 (36 HSPs)
chr2 (13-131)||(4732318-4732436)
chr2 (60-156)||(7581895-7581991)
chr2 (13-145)||(15920102-15920234)
chr2 (13-128)||(4604062-4604176)
chr2 (13-90)||(7072720-7072797)
chr2 (5-109)||(4703410-4703514)
chr2 (12-134)||(28230842-28230973)
chr2 (13-134)||(4739574-4739704)
chr2 (13-107)||(11798283-11798377)
chr2 (13-107)||(20570239-20570333)
chr2 (11-128)||(31271621-31271738)
chr2 (14-134)||(36868253-36868382)
chr2 (45-145)||(6431195-6431295)
chr2 (12-144)||(15673721-15673853)
chr2 (13-131)||(17767324-17767439)
chr2 (70-134)||(44942531-44942595)
chr2 (8-87)||(27665836-27665915)
chr2 (13-76)||(34471272-34471335)
chr2 (60-134)||(25068095-25068169)
chr2 (13-134)||(2251101-2251222)
chr2 (13-85)||(30933536-30933608)
chr2 (70-134)||(34962888-34962952)
chr2 (45-156)||(12183118-12183229)
chr2 (13-76)||(20560879-20560942)
chr2 (13-144)||(25622798-25622929)
chr2 (12-126)||(2763281-2763395)
chr2 (13-83)||(5071124-5071194)
chr2 (13-107)||(25237085-25237179)
chr2 (13-134)||(8027758-8027879)
chr2 (13-134)||(13268811-13268932)
chr2 (13-134)||(35353879-35354000)
chr2 (13-74)||(41797909-41797970)
chr2 (69-130)||(45694263-45694324)
chr2 (70-134)||(12704932-12704996)
chr2 (66-98)||(12994027-12994059)
chr2 (70-130)||(17267938-17267998)
[»] chr5 (24 HSPs)
chr5 (13-142)||(29098026-29098155)
chr5 (16-145)||(25962147-25962276)
chr5 (13-90)||(11734591-11734668)
chr5 (13-134)||(23428497-23428618)
chr5 (13-134)||(32347469-32347590)
chr5 (70-134)||(42396325-42396389)
chr5 (13-76)||(6281356-6281419)
chr5 (13-144)||(12524418-12524549)
chr5 (66-152)||(7151032-7151118)
chr5 (13-134)||(39531158-39531288)
chr5 (60-105)||(17518117-17518162)
chr5 (59-144)||(35402268-35402353)
chr5 (70-134)||(6635493-6635557)
chr5 (70-134)||(20483431-20483495)
chr5 (66-134)||(25770845-25770913)
chr5 (13-76)||(2555096-2555159)
chr5 (13-76)||(17732132-17732195)
chr5 (13-79)||(3079080-3079146)
chr5 (13-91)||(42505157-42505235)
chr5 (70-131)||(33164281-33164342)
chr5 (13-134)||(40564911-40565032)
chr5 (70-142)||(6681688-6681760)
chr5 (70-134)||(7771633-7771697)
chr5 (13-129)||(18472480-18472596)
[»] chr7 (30 HSPs)
chr7 (5-141)||(38273136-38273272)
chr7 (17-145)||(29352454-29352582)
chr7 (13-134)||(17473507-17473628)
chr7 (13-134)||(17579586-17579707)
chr7 (13-134)||(37375801-37375922)
chr7 (9-156)||(21954575-21954722)
chr7 (59-141)||(25876682-25876764)
chr7 (13-142)||(32740989-32741118)
chr7 (13-126)||(45482317-45482430)
chr7 (5-125)||(25531701-25531821)
chr7 (13-76)||(17508950-17509013)
chr7 (13-76)||(17544201-17544264)
chr7 (13-92)||(35141417-35141496)
chr7 (45-107)||(39707550-39707612)
chr7 (13-134)||(45457302-45457432)
chr7 (13-134)||(21552209-21552330)
chr7 (13-134)||(36719307-36719428)
chr7 (13-78)||(39532721-39532786)
chr7 (70-142)||(9719785-9719857)
chr7 (13-156)||(9137173-9137316)
chr7 (13-76)||(42644967-42645030)
chr7 (45-144)||(45949465-45949564)
chr7 (60-134)||(9137646-9137720)
chr7 (45-134)||(44482660-44482749)
chr7 (13-90)||(46025801-46025878)
chr7 (60-128)||(26638420-26638488)
chr7 (60-128)||(26638497-26638565)
chr7 (70-134)||(32643213-32643277)
chr7 (72-144)||(33530288-33530360)
chr7 (13-144)||(38649112-38649244)
[»] chr6 (14 HSPs)
chr6 (13-145)||(12654064-12654196)
chr6 (13-134)||(12481125-12481246)
chr6 (22-89)||(20028470-20028537)
chr6 (13-134)||(1106613-1106743)
chr6 (78-144)||(1944325-1944391)
chr6 (70-156)||(13871438-13871524)
chr6 (13-144)||(20496422-20496553)
chr6 (13-73)||(35038989-35039051)
chr6 (5-83)||(14730910-14730988)
chr6 (13-90)||(4660726-4660803)
chr6 (13-90)||(5416978-5417055)
chr6 (70-134)||(4394015-4394079)
chr6 (70-134)||(23101220-23101284)
chr6 (70-134)||(23654495-23654559)
[»] chr1 (30 HSPs)
chr1 (13-144)||(40862580-40862711)
chr1 (13-144)||(47551324-47551455)
chr1 (9-128)||(10304823-10304942)
chr1 (13-156)||(12871838-12871981)
chr1 (13-90)||(28399090-28399167)
chr1 (60-145)||(32878936-32879021)
chr1 (59-144)||(45425282-45425367)
chr1 (59-108)||(6158837-6158886)
chr1 (13-129)||(26771350-26771466)
chr1 (13-132)||(4870788-4870907)
chr1 (13-83)||(13691517-13691587)
chr1 (16-145)||(9298180-9298309)
chr1 (61-134)||(18343857-18343930)
chr1 (13-98)||(23791269-23791354)
chr1 (13-145)||(13152668-13152800)
chr1 (70-142)||(45193440-45193512)
chr1 (13-76)||(4882122-4882185)
chr1 (13-76)||(14265596-14265659)
chr1 (11-86)||(15575793-15575868)
chr1 (13-144)||(33177352-33177483)
chr1 (13-144)||(44513756-44513887)
chr1 (13-83)||(34566971-34567041)
chr1 (66-156)||(42491110-42491200)
chr1 (13-134)||(2350861-2350982)
chr1 (13-134)||(28677885-28678006)
chr1 (19-144)||(40992527-40992652)
chr1 (59-107)||(13999227-13999275)
chr1 (70-134)||(15391064-15391128)
chr1 (70-134)||(44517393-44517457)
chr1 (78-134)||(51418229-51418285)
[»] scaffold0155 (1 HSPs)
scaffold0155 (13-134)||(35329-35450)
[»] chr8 (22 HSPs)
chr8 (5-90)||(13575955-13576040)
chr8 (5-145)||(32778718-32778858)
chr8 (13-134)||(10338585-10338706)
chr8 (61-129)||(33526630-33526698)
chr8 (16-105)||(20993075-20993164)
chr8 (66-144)||(6219918-6219996)
chr8 (13-131)||(10148193-10148311)
chr8 (71-105)||(13864627-13864661)
chr8 (70-130)||(19720258-19720318)
chr8 (13-76)||(40490287-40490350)
chr8 (13-79)||(22787799-22787865)
chr8 (13-83)||(27534166-27534236)
chr8 (13-90)||(4928211-4928288)
chr8 (18-107)||(9270287-9270376)
chr8 (71-128)||(13977653-13977710)
chr8 (45-134)||(38545949-38546038)
chr8 (70-134)||(7579675-7579739)
chr8 (70-134)||(11162128-11162192)
chr8 (70-130)||(23971003-23971063)
chr8 (70-134)||(30026702-30026766)
chr8 (17-141)||(41431354-41431478)
chr8 (60-128)||(42261177-42261245)
[»] scaffold0002 (1 HSPs)
scaffold0002 (59-104)||(404547-404592)
[»] scaffold0432 (1 HSPs)
scaffold0432 (70-145)||(2254-2329)
[»] scaffold0294 (1 HSPs)
scaffold0294 (13-76)||(3813-3876)
[»] scaffold0219 (1 HSPs)
scaffold0219 (56-107)||(21242-21293)
[»] scaffold0112 (1 HSPs)
scaffold0112 (16-142)||(25269-25395)
[»] scaffold0157 (1 HSPs)
scaffold0157 (79-144)||(961-1026)
[»] scaffold0999 (1 HSPs)
scaffold0999 (13-145)||(1932-2064)
[»] scaffold0056 (1 HSPs)
scaffold0056 (70-134)||(74409-74473)


Alignment Details
Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 25084392 - 25084176
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatg 104  Q
    |||||||||||||||| |||||||||||||||| |  |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  25084392 aatttgcaaacaaacttacaacatgcatgttaataacattaaacagcaaaatacatatgcctacaaatatgattatattcaagtctccagaatattcatg 25084293  T
Q  105 tcttatgatctacaacgttgacgacgccaatatcattgatctaatttgcactctatcaattttggccacaaaattttggcaggttgttttgttgattttt 204  Q
    ||| ||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  25084292 tctcatgatctgcaacgttgacgacaccaacatcattgatctaatttgcactctatcaattttggtcacaaaattttggtaggttgttttgttgattttt 25084193  T
Q  205 attttgagtaaattaca 221  Q
    |||||||||||||||||    
T  25084192 attttgagtaaattaca 25084176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 53962480 - 53962366
Alignment:
Q  11 caaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttat 110  Q
    |||||||| ||||||||| |||||||||||||| ||||| || | ||| ||||| ||||||||||| ||||||||||||||   ||||||||||||   |    
T  53962480 caaacaaattcacaacatccatgttaacagtataaaacaacagagtatctatgcctacaaatatgactatattcaagtctttgaaatattcatgtcccct 53962381  T
Q  111 gatctacaacgttga 125  Q
    ||||| |||||||||    
T  53962380 gatctccaacgttga 53962366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 25135127 - 25135211
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||   |||| |||||||||||| | ||| |||||||||    
T  25135127 tatgcctaaaaatatgattatattcaagtcttcagaatattcatgtcttcatatctgcaacgttgacgatgtcaaaatcattgat 25135211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 55446423 - 55446305
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||| ||||| |||  ||||||| || || |||||||||| ||| ||||| || |||||||| ||||||||||||||||||||| ||||| ||   ||    
T  55446423 aacaaagtcacatcatctatgttaatagcataaaacagcaaagtatctatgcatataaatatgactatattcaagtcttcagaatactcatgactccgga 55446324  T
Q  113 tctacaacgttgacgacgc 131  Q
    ||| |||||||||||||||    
T  55446323 tctgcaacgttgacgacgc 55446305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 55455234 - 55455116
Alignment:
Q  16 aaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatct 115  Q
    ||||||||| ||| |||||||| || || |||| ||||| || |||||||||||||||||| |||||||| |||| | ||||| ||||||||   |||||    
T  55455234 aaactcacatcatccatgttaatagcataaaacggcaaagtacatatgcttacaaatatgactatattcatgtctccggaatactcatgtctccggatct 55455135  T
Q  116 acaacgttgacgacgccaa 134  Q
     ||||||| ||||||||||    
T  55455134 gcaacgttaacgacgccaa 55455116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 48652203 - 48652324
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || |||||||||  ||  ||||| ||||||||||| ||||||||||||| | ||||  ||||||||   ||    
T  48652203 aacaaactcacatcatccatgttaatagcataaaacagcaaggtacctatgcctacaaatatgactatattcaagtctccggaatcctcatgtctccgga 48652302  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||||||||    
T  48652303 tctgcaacgttgacgacgccaa 48652324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 3312802 - 3312688
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||| ||||||||| |||||||| || || |||| ||||||||  ||||| ||||||||||| ||||||||||||  | ||||||| ||||||   ||    
T  3312802 aacaaagtcacaacatccatgttaatagcataaaacggcaaaatacctatgcctacaaatatgactatattcaagtcaccggaatatt-atgtctctgga 3312704  T
Q  113 tctacaacgttgacga 128  Q
    ||||||||||||||||    
T  3312703 tctacaacgttgacga 3312688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 30156044 - 30156173
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || ||||  |||| ||||||||| ||||||||||| |||||||| |||| |  ||||  ||||||    ||    
T  30156044 aacaaactcacaacatccatgttaatagcataaaacgacaaagtatatatgcctacaaatatgactatattcatgtctccgaaatacccatgtccccgga 30156143  T
Q  113 tctacaacgttgacgacgccaatatcattg 142  Q
    ||| |||| ||||||||||||| |||||||    
T  30156144 tctgcaaccttgacgacgccaaaatcattg 30156173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 31462509 - 31462630
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||| ||||| |||||||| || || |||| ||||| || |||||| ||||||||||||||||||||  |||   ||||| ||||||||   ||    
T  31462509 aacaaactcaaaacatccatgttaatagaataaaacggcaaagtacatatgcctacaaatatgattatattcatatctctggaataatcatgtctctgga 31462608  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| || |||||||||||||||    
T  31462609 tctgcaccgttgacgacgccaa 31462630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 2148123 - 2148004
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatg 104  Q
    ||||||| |||||||||||||||| ||| |||| || || |||| ||||| || | |||  ||||||||||| ||||||||||||||| ||||| ||||     
T  2148123 aatttgcgaacaaactcacaacatccatattaatagcataaaacggcaaagtacaaatgtctacaaatatgactatattcaagtcttcggaatactcatc 2148024  T
Q  105 tcttatgatctacaacgttga 125  Q
    ||| | | |||||||||||||    
T  2148023 tctca-ggtctacaacgttga 2148004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 4019962 - 4019827
Alignment:
Q  9 tgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtctt 108  Q
    |||||||||||||||||||| |||||||| || || ||||  |||| || ||| || || | | || | ||||||||||||| ||||||| ||||| ||     
T  4019962 tgcaaacaaactcacaacatccatgttaatagcataaaacgacaaagtacataagcctatacagattactatattcaagtctccagaatactcatgcctc 4019863  T
Q  109 atgatctacaacgttgacgacgccaatatcattgat 144  Q
      ||||| ||||||||||||||||||  ||||||||    
T  4019862 cggatctgcaacgttgacgacgccaaagtcattgat 4019827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 53427105 - 53427027
Alignment:
Q  66 tacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    |||| |||||| ||||||||||||||| ||||| ||| |||||  ||||| ||||||||||||||||||  ||||||||    
T  53427105 tacacatatgactatattcaagtcttcggaatactcaagtcttcggatctgcaacgttgacgacgccaaagtcattgat 53427027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 33637769 - 33637648
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || |||  ||||  ||  ||||| ||||||||||| ||||||||||||| | ||||  ||||||||   ||    
T  33637769 aacaaactcacatcatccatgttaatagcataaaatggcaaggtacctatgcctacaaatatgactatattcaagtctccggaatcctcatgtctacgga 33637670  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||||||||    
T  33637669 tctgcaacgttgacgacgccaa 33637648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 50460550 - 50460437
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| ||||||||||  || ||||| |||| || | | || |||| |||||| ||||||||||||||  ||||| |||||||||  ||    
T  50460550 aacaaactcacaacatccatgttaacaacataaaacaacaaagtacaaaagcctacacatatgactatattcaagtctttggaatactcatgtcttcgga 50460451  T
Q  113 tctacaacgttgac 126  Q
    | | ||||||||||    
T  50460450 tttgcaacgttgac 50460437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 4206308 - 4206371
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| ||| |||| ||||| |||| ||||| || ||||||||||||||||||    
T  4206308 aacaaactcacaacatccatattaatagtataaaacggcaaagtacatatgcttacaaatatga 4206371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 33937173 - 33937260
Alignment:
Q  21 cacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtctt 108  Q
    ||||| || |||||||| ||||| |||   ||||||| |||||| ||||||||| ||||||||||||| | ||||||| |||||||||    
T  33937173 cacaaaatccatgttaatagtataaaatgacaaaatacatatgcatacaaatataattatattcaagtatccagaatactcatgtctt 33937260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 1074717 - 1074778
Alignment:
Q  73 atgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    |||||||||||||||||| | ||||| ||||||||   ||||| ||||||||||||||||||    
T  1074717 atgattatattcaagtctccggaatactcatgtctccggatctgcaacgttgacgacgccaa 1074778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 4817634 - 4817755
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| ||||| |||  | ||| ||  |||||  | |||||||| |||||||| || | | ||||| |||||||||  ||    
T  4817634 aacaaactcacaacatccatgttaatagtataaaatggaaaagtacttatgccaataaatatgactatattcatgtatccggaatactcatgtcttcgga 4817733  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    |||  |||||||||||||||||    
T  4817734 tctggaacgttgacgacgccaa 4817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 49627866 - 49627979
Alignment:
Q  21 cacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaac 120  Q
    |||| ||| |||||||| || || |||| ||||| ||  ||||| ||||||||||| |||||||| ||||   ||||| ||||||||   ||||| ||||    
T  49627866 cacatcatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgactatattcatgtctctggaatactcatgtctccggatctgcaac 49627965  T
Q  121 gttgacgacgccaa 134  Q
    ||||||||||||||    
T  49627966 gttgacgacgccaa 49627979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 4082017 - 4081953
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||||||| | ||||| |||||| ||  ||||| ||||||||||||||||||    
T  4082017 aatatgactatattcaagtctccggaataatcatgtattcggatctgcaacgttgacgacgccaa 4081953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 11819392 - 11819328
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||||||| | ||||  |||||||||  ||||| ||||||||||||||||||    
T  11819392 aatatgactatattcaagtctccggaatcctcatgtcttcggatctgcaacgttgacgacgccaa 11819328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 36691619 - 36691683
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||||||| | ||||| ||||||||   ||||| ||||||||||||||||||    
T  36691619 aatatgactatattcaagtctccggaatactcatgtctccagatctgcaacgttgacgacgccaa 36691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 41598221 - 41598309
Alignment:
Q  4 taatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttc 92  Q
    |||| ||||||||||||| |||||| ||| |||| |  || |||  ||| | || |||||| |||||||||||||||||||||||||||    
T  41598221 taatatgcaaacaaactcgcaacatccattttaataacataaaatggcagagtacatatgcctacaaatatgattatattcaagtcttc 41598309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 54706486 - 54706549
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| || || |||| ||||| || |||||| |||||||||||    
T  54706486 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatga 54706549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 3457305 - 3457231
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgatta 79  Q
    ||||||| |||||||||||||||| |||||||| || || ||||  |||| || |||||| ||||||||| ||||    
T  3457305 aatttgcgaacaaactcacaacatccatgttaatagcataaaacgacaaagtacatatgcctacaaatataatta 3457231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 8084052 - 8084098
Alignment:
Q  45 aaacagcaaaatatatatgcttacaaatatgattatattcaagtctt 91  Q
    ||||| |||||||||||||||||| ||| ||||||||||||| ||||    
T  8084052 aaacaacaaaatatatatgcttactaatgtgattatattcaaatctt 8084098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 34103511 - 34103629
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||| ||||||||| |||||||| || |  |||| ||||| ||| ||||  ||||||||||| ||||| ||||||| | ||||| |||| |||    |    
T  34103511 aacaaattcacaacatccatgttaatagcacaaaacggcaaagtatttatgactacaaatatgactatatccaagtctccggaatactcatttctccgta 34103610  T
Q  113 tctacaacgttgacgacgc 131  Q
    ||| |||||||||||||||    
T  34103611 tctgcaacgttgacgacgc 34103629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 39429310 - 39429385
Alignment:
Q  51 caaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacga 128  Q
    |||||||||||||| |||||||  || |||||||||||||  |||||| |||||||||  |||||  |||||||||||    
T  39429310 caaaatatatatgcctacaaat--gactatattcaagtctctagaatactcatgtcttcggatctgaaacgttgacga 39429385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 48401211 - 48401141
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatatt 83  Q
    |||||||||||| ||| |||||||| || ||  ||||||||| || |||||| ||||||||||| ||||||    
T  48401211 aacaaactcacatcatccatgttaatagcatataacagcaaagtacatatgcctacaaatatgactatatt 48401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 48401467 - 48401397
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatatt 83  Q
    |||||||||||| ||| |||||||| || ||  ||||||||| || |||||| ||||||||||| ||||||    
T  48401467 aacaaactcacatcatccatgttaatagcatataacagcaaagtacatatgcctacaaatatgactatatt 48401397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 25084162 - 25084125
Alignment:
Q  221 agagaagtttgaattaaacctcatttccctcttatatc 258  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  25084162 agagaagtttaaattaaaccacatttccctcttatatc 25084125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 53293378 - 53293301
Alignment:
Q  67 acaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    |||||||||| || ||||||||| |||||||| || ||||||  | ||  |||||||||||||| ||| |||||||||    
T  53293378 acaaatatgactagattcaagtcatcagaatactcgtgtcttcgggtcagcaacgttgacgacgtcaaaatcattgat 53293301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 7117972 - 7117912
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaac 120  Q
    ||||| ||||||||||||||||||||| | ||||||||| ||| ||||   ||||||||||    
T  7117972 tatgcctacaaatatgattatattcaaatattcagaatactcaagtctctcgatctacaac 7117912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 36624515 - 36624579
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||||| |||| ||||||| ||||||||   ||||| |||||||||||| |||||    
T  36624515 aatatgactatattcatgtctccagaatactcatgtctccggatctgcaacgttgacgatgccaa 36624579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 43839271 - 43839391
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||| ||||||||||| |||||||| |  || |||| ||||| || | |||| |||| ||||||||||||| || ||||| |||||  || |||||  ||    
T  43839271 aacagactcacaacatccatgttaatatcataaaacggcaaagtacaaatgcctacacatatgattatatttaaatcttcggaataaccacgtcttcgga 43839370  T
Q  113 tctacaacgttgacgacgcca 133  Q
    ||| |||||| || |||||||    
T  43839371 tctgcaacgtggatgacgcca 43839391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 44984619 - 44984711
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgt 105  Q
    |||||||||| | ||| ||| |||| ||||| |||||| | | || ||||   ||||||||||| |||||||||||||||| |||| ||||||    
T  44984619 aacaaactcagagcatccatattaatagtataaaacagaagagtacatatatctacaaatatgactatattcaagtcttcaaaatactcatgt 44984711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 53155250 - 53155314
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||||| |||||| ||||| ||||||||   ||||| ||| ||||||||||||||    
T  53155250 aatatgactatattcatgtcttcggaatactcatgtctccggatctgcaaagttgacgacgccaa 53155314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 6082185 - 6082328
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||| ||||| || |||||| ||||||||||| ||||||||||||| ||||||| |||||| |   ||    
T  6082185 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactatattcaagtctccagaatactcatgtttccgga 6082284  T
Q  113 tctacaacgttgacgacgccaatatcattgatctaatttgcact 156  Q
    ||| |||||||||||| ||||| |||||||| | ||| ||||||    
T  6082285 tctgcaacgttgacgatgccaaaatcattgaccgaatctgcact 6082328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 5814706 - 5814563
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||  | ||| ||| ||||| ||||||||||| ||||||||||||| ||||||| ||||||||   ||    
T  5814706 aacaaactcacaacatccatgttaatagcataaaatggaaaagtatttatgcctacaaatatgactatattcaagtctccagaatactcatgtctctgga 5814607  T
Q  113 tctacaacgttgacgacgccaatatcattgatctaatttgcact 156  Q
    ||| ||||||||| ||||||||  ||||||||| ||| ||||||    
T  5814606 tctgcaacgttgatgacgccaaagtcattgatcgaatctgcact 5814563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 41837644 - 41837560
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    ||||| ||||||| ||| ||||||||||||||| ||||| ||||||||   |||||||||||||||||||||||| |||||||||    
T  41837644 tatgcctacaaatgtgactatattcaagtcttcggaatactcatgtctctagatctacaacgttgacgacgccaaaatcattgat 41837560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 39797333 - 39797238
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtctt 108  Q
    |||||||||||||||| |||||||| |  || |||| ||||||||| ||||| |||||||||||||||||| |||| ||||||||| ||| |||||    
T  39797333 aacaaactcacaacattcatgttaatatcataaaacggcaaaatatctatgcctacaaatatgattatatttaagttttcagaatactcaagtctt 39797238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 29576873 - 29577003
Alignment:
Q  11 caaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttat 110  Q
    |||||||||||||||||| | | || | ||||| |||| ||||  || | | || |||| |||||| ||||||||||||| | |||||||||||||||      
T  29576873 caaacaaactcacaacatccctctttatagtataaaacggcaaggtacaaaagcctacacatatgactatattcaagtctccggaatattcatgtcttcg 29576972  T
Q  111 gatctacaacgttgacgacgccaatatcatt 141  Q
    ||||| |||||||||||||||||| ||||||    
T  29576973 gatctgcaacgttgacgacgccaaaatcatt 29577003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 26742218 - 26742339
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || |||| ||||||||||||||| ||||||||||| |||||||| |||| || ||||  ||||| |   ||    
T  26742218 aacaaactcacatcatccatgttaatagcataaaacggcaaaatatatatgcctacaaatatgactatattcatgtctccaaaatacccatgtgtccaga 26742317  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||| ||||    
T  26742318 tctgcaacgttgacgactccaa 26742339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 12716881 - 12716999
Alignment:
Q  16 aaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatct 115  Q
    ||||||||||||| ||| |||| ||||| ||||| |||| ||| ||||| |||| |||||| |||||| ||||||  ||||||||||||||||  |||||    
T  12716881 aaactcacaacatccatattaatagtataaaacaacaaagtatttatgcctacacatatgactatattaaagtctctagaatattcatgtctttggatct 12716980  T
Q  116 acaacgttgacgacgccaa 134  Q
     |||||   ||||||||||    
T  12716981 gcaacggctacgacgccaa 12716999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 22757460 - 22757339
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||| || || ||  ||||| ||||||||||| |||||||| |||| | ||||| ||||||||   ||    
T  22757460 aacaaactcacaacatccatgttaatagcataaaacggctaagtacctatgcctacaaatatgactatattcatgtctccggaatactcatgtctccgga 22757361  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    | | ||||||||||||||||||    
T  22757360 tttgcaacgttgacgacgccaa 22757339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 26674738 - 26674617
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||||| ||| ||  ||||| ||||||||||| | |||| | |||| |  |||| |||||||||  ||    
T  26674738 aacaaactcacaacatccatgttaatagcataaaacagaaaagtacctatgcctacaaatatgactgtatttatgtctccgaaatactcatgtcttcgga 26674639  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||||||||    
T  26674638 tctgcaacgttgacgacgccaa 26674617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 51152490 - 51152369
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||| ||||| || || ||| ||||||||||| |||||||| |||| | ||||| |||| |||   ||    
T  51152490 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacatttgcctacaaatatgactatattcatgtctccggaatactcatatctccgga 51152391  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| |||||||||||| |||||    
T  51152390 tctgcaacgttgacgatgccaa 51152369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 7060689 - 7060568
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || ||||   ||| ||  ||||| ||||||||||| |||||||| |||| | ||||| ||||||||   ||    
T  7060689 aacaaactcacaacatccatgttaatagcataaaacgataaagtacctatgcctacaaatatgactatattcatgtctccggaatactcatgtctctgga 7060590  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||| ||||||||    
T  7060589 tctgcaacgttgatgacgccaa 7060568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 7083567 - 7083688
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||| ||||| ||  ||||| || |||||||| |||||| | |||| | ||||| ||||||||   ||    
T  7083567 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacctatgcctataaatatgactatatttatgtctccggaatactcatgtctccaga 7083666  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||| ||||    
T  7083667 tctgcaacgttgacgacaccaa 7083688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 36124103 - 36124224
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || || | |||||  | |||||| ||||||||||| |||||||| |||| | ||||| |||||| |   ||    
T  36124103 aacaaactcacaacatccatgttaatagcataaatcggcaaagcacatatgcctacaaatatgactatattcatgtctcccgaatactcatgtttccgga 36124202  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| |||||||||| |||||||    
T  36124203 tctgcaacgttgacaacgccaa 36124224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 30202347 - 30202283
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||||||| ||||||| ||||||||   ||||| ||||||||||||||||||    
T  30202347 aatatgactatattcaagtctccagaataatcatgtctccggatctgcaacgttgacgacgccaa 30202283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 31932622 - 31932530
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgt 105  Q
    |||||||||| ||||| |||||||| || || |||||  | | || |||||| |||||||||||||||||||||| ||||| |||| ||||||    
T  31932622 aacaaactcataacatccatgttaatagcataaaacaatagagtacatatgcctacaaatatgattatattcaagccttcaaaatactcatgt 31932530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 45681760 - 45681810
Alignment:
Q  56 tatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtc 106  Q
    ||||||||| || ||||||||||||||||||||| |||||||| |||||||    
T  45681760 tatatatgcctataaatatgattatattcaagtcatcagaatactcatgtc 45681810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 3159341 - 3159260
Alignment:
Q  9 tgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    ||||||||| ||||||| || |||||||| || || |||||||||| ||  ||||| ||||||||||| ||| |||||||||    
T  3159341 tgcaaacaatctcacaatatccatgttaatagcatgaaacagcaaagtacttatgcctacaaatatgactatgttcaagtct 3159260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 23926401 - 23926280
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    ||||||||||||||||  ||||||| || || |||| ||||| || ||| || ||||||||||| |||||| || ||| | ||||| ||||||||   ||    
T  23926401 aacaaactcacaacatctatgttaatagcatcaaacggcaaagtacataagcctacaaatatgactatattaaaatctccggaatagtcatgtctctgga 23926302  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||| || |||||    
T  23926301 tctgcaacgttgatgatgccaa 23926280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 38943903 - 38944024
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||| | ||| |||||||| || || ||||  |||| ||| ||||| ||||||||||| |||||||| |||| | ||||| || |||||   ||    
T  38943903 aacaaactcatatcatccatgttaatagcataaaacgacaaagtatttatgcctacaaatatgactatattcatgtctccggaatactcgtgtctccgga 38944002  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| |||||||||| |||||||    
T  38944003 tctgcaacgttgacaacgccaa 38944024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 55600294 - 55600367
Alignment:
Q  15 caaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagt 88  Q
    |||| ||||| ||| |||||||| || || |||| ||||| ||| ||||| |||||||||||||||||||||||    
T  55600294 caaattcacatcatccatgttaatagcataaaacggcaaagtatttatgcctacaaatatgattatattcaagt 55600367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 56250486 - 56250437
Alignment:
Q  51 caaaatatatatgcttacaaatatgattatattcaagtcttcagaatatt 100  Q
    |||||||| ||||| ||||||||||| ||||||||||||| |||||||||    
T  56250486 caaaatatctatgcatacaaatatgactatattcaagtctccagaatatt 56250437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 13586052 - 13586124
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattg 142  Q
    |||||||||||||||  ||||   ||||| ||||||||| |||||| |||||||||| ||||||| |||||||    
T  13586052 aatatgattatattcttgtctctggaatactcatgtcttctgatctgcaacgttgactacgccaaaatcattg 13586124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 22049165 - 22049297
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| |  || |||||| ||| ||| ||||| ||||||||  | ||||||||| | |   ||||| ||||||||| |||    
T  22049165 aacaaactcacaacatccatgttaataacataaaacagaaaagtatttatgcctacaaatacaactatattcaattatctggaatactcatgtcttctga 22049264  T
Q  113 tctacaacgttgacgacgccaatatcattgatc 145  Q
    |||  ||||||| |||| ||||  |||||||||    
T  22049265 tctgtaacgttggcgactccaaagtcattgatc 22049297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 24611612 - 24611676
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||||||||||||||||| | ||||| | |||||||  ||| | ||||||||||||||||||    
T  24611612 aatatgattatattcaagtctccggaatacttatgtcttcagatttgcaacgttgacgacgccaa 24611676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 37870170 - 37870118
Alignment:
Q  56 tatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtctt 108  Q
    |||||||||||| ||| |||| ||||||||||||| | |||||||||||||||    
T  37870170 tatatatgcttaaaaacatgactatattcaagtctcctgaatattcatgtctt 37870118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 29266706 - 29266761
Alignment:
Q  79 atattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    |||||||||||| ||||||| ||||||||   ||||| ||||||||||||||||||    
T  29266706 atattcaagtctccagaatactcatgtctccggatctgcaacgttgacgacgccaa 29266761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 477767 - 477861
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtct 107  Q
    |||||||||||||||| |||||||| || || ||||  |||| ||  || || ||||||||||| ||||||||  ||||| ||||| ||||||||    
T  477767 aacaaactcacaacatccatgttaatagcataaaacgtcaaagtacctacgcctacaaatatgactatattcatttcttcggaatactcatgtct 477861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 7860958 - 7861069
Alignment:
Q  16 aaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatct 115  Q
    |||||||||||||  ||||||| || || |||| ||||||||| ||||| |||||||||||   |||||||||||   ||| | ||||||||   |||||    
T  7860958 aaactcacaacatctatgttaatagcataaaacggcaaaatatctatgcctacaaatatga--ctattcaagtctctggaacactcatgtctccagatct 7861055  T
Q  116 acaacgttgacgac 129  Q
     |||||||||||||    
T  7861056 gcaacgttgacgac 7861069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 25658542 - 25658476
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgatta 79  Q
    |||||||||||||||| |||||| | || || |||| ||||| || |||||| ||||||||||||||    
T  25658542 aacaaactcacaacatccatgttgatagcataaaacggcaaagtacatatgcctacaaatatgatta 25658476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 626305 - 626426
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    ||||| |||||||||| |||||||| || || |||| ||||| ||   |||| ||||||||||| |||||| | |||| | ||||| |||||||||  ||    
T  626305 aacaagctcacaacatccatgttaatagcataaaacggcaaagtacccatgcctacaaatatgactatatttatgtctccggaatactcatgtcttcaga 626404  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||| || |||||| ||||    
T  626405 tctgcaatgtcgacgacaccaa 626426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 12519950 - 12519885
Alignment:
Q  79 atattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    |||||||||||||||||||| ||||||||   ||||| |||| | |||||||| ||| ||||||||    
T  12519950 atattcaagtcttcagaatactcatgtctccggatctgcaacatggacgacgctaatgtcattgat 12519885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 24789549 - 24789476
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaa 86  Q
    ||||||||  |||||| |||||||| || || ||||  ||||||| |||||| ||| |||||||||||||||||    
T  24789549 aacaaactgccaacattcatgttaatagaataaaacgacaaaatacatatgcctacgaatatgattatattcaa 24789476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 24818710 - 24818783
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaa 86  Q
    ||||||||  |||||| |||||||| || || ||||  ||||||| |||||| ||| |||||||||||||||||    
T  24818710 aacaaactgccaacattcatgttaatagaataaaacgacaaaatacatatgcctacgaatatgattatattcaa 24818783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 31994370 - 31994257
Alignment:
Q  31 atgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacg 130  Q
    ||||||| || || |||| ||||| || |||||| |||||||||||||||||||||| |  || |||| |||||| ||  | ||| ||||||||||| |     
T  31994370 atgttaatagcataaaacggcaaagtacatatgcgtacaaatatgattatattcaagccaccaaaatactcatgttttcggttctgcaacgttgacggca 31994271  T
Q  131 ccaatatcattgat 144  Q
    | || |||||||||    
T  31994270 caaaaatcattgat 31994257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 53647981 - 53647912
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatat 82  Q
    |||||||||| ||||| |||||||| || ||||||| ||||| ||  ||||| ||||||||||| |||||    
T  53647981 aacaaactcataacatccatgttaatagcattaaacggcaaagtacctatgcctacaaatatgactatat 53647912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 4732436 - 4732318
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || ||||| ||||| || ||||| ||||||||||| ||||||||||||| | ||||| ||||||||   ||    
T  4732436 aacaaactcacaacatccatgttaatagcataaaacaacaaaaaatttatgcctacaaatatgactatattcaagtctccggaatactcatgtctccgga 4732337  T
Q  113 tctacaacgttgacgacgc 131  Q
    ||| |||||||||||||||    
T  4732336 tctgcaacgttgacgacgc 4732318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 7581895 - 7581991
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgatctaatttgcact 156  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||||||| |||  || |||||  ||||||||||    
T  7581895 tatgcctacaaatatgattatattgaagtctccagaatattcatgtcttcggatctacaacgttgacgacgtcaaagtcgttgattgaatttgcact 7581991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 15920234 - 15920102
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    ||||||||| ||||||  ||||||| || || |||| ||||| || |||||| ||||||||||| |||||||||||||||  |||| |||||| |   ||    
T  15920234 aacaaactcgcaacatcaatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactatattcaagtcttcgaaatactcatgtttccgga 15920135  T
Q  113 tctacaacgttgacgacgccaatatcattgatc 145  Q
    ||| ||||||||||||||||||  |||||||||    
T  15920134 tctgcaacgttgacgacgccaaagtcattgatc 15920102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 4604062 - 4604176
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    ||||||||||||| || |||||||| || || |||| ||||||||| ||||| ||||||||||| |||||||||||||  |||||| | ||||||   ||    
T  4604062 aacaaactcacaatatccatgttaatagcataaaacggcaaaatatctatgcctacaaatatgactatattcaagtctctagaatact-atgtctctaga 4604160  T
Q  113 tctacaacgttgacga 128  Q
    ||| ||||||||||||    
T  4604161 tctgcaacgttgacga 4604176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 7072720 - 7072797
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    |||||||||||||||| |||||||| || || |||| ||||| ||||||||| ||||||||||| |||||||| ||||    
T  7072720 aacaaactcacaacatccatgttaatagcataaaacggcaaagtatatatgcctacaaatatgactatattcatgtct 7072797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 4703514 - 4703410
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatg 104  Q
    ||||| ||||||||||| |||||  |||||||| | ||| |||||| | | || |||||||||||||||||| |||||| ||||||  ||||||||||||    
T  4703514 aattttcaaacaaactcgcaacaaccatgttaataatataaaacagtatagtacatatgcttacaaatatgactatatttaagtctgaagaatattcatg 4703415  T
Q  105 tctta 109  Q
     ||||    
T  4703414 actta 4703410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 28230842 - 28230973
Alignment:
Q  12 aaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgatta---------tattcaagtcttcagaatattca 102  Q
    ||||||||||||| | | |||||||| ||||| ||||||||||||| |||||| ||||||||||||||         |||||| ||||  ||||||||||    
T  28230842 aaacaaactcacagcctccatgttaatagtataaaacagcaaaatacatatgcctacaaatatgattaatatgactatattcatgtctctagaatattca 28230941  T
Q  103 tgtcttatgatctacaacgttgacgacgccaa 134  Q
    |||||   ||||| ||| ||||||||||||||    
T  28230942 tgtctccagatctgcaatgttgacgacgccaa 28230973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 4739704 - 4739574
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgatta---------tattcaagtcttcagaatattcat 103  Q
    |||||||||||||||| |||||||| || || ||||| |||| ||| ||||| ||||||||||| ||         ||||||||||||||| ||| ||||    
T  4739704 aacaaactcacaacatccatgttaatagcataaaacaacaaagtatctatgcctacaaatatgactaatgtgacaatattcaagtcttcagtatactcat 4739605  T
Q  104 gtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||   ||||| ||||||||||||||||||    
T  4739604 gtctccggatctgcaacgttgacgacgccaa 4739574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 11798283 - 11798377
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtct 107  Q
    |||||||||||||||| |||||||| || || ||||  |||| ||  ||||| ||||||||||| ||||||||||||| || |||| ||||||||    
T  11798283 aacaaactcacaacatccatgttaatagcataaaacgacaaagtacctatgcctacaaatatgactatattcaagtctccataatactcatgtct 11798377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 20570333 - 20570239
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtct 107  Q
    |||||||||||| |||  ||||||| || || ||||  |||| ||  ||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  20570333 aacaaactcacagcatctatgttaatagcataaaacgacaaagtagctatgcttacaactatgactatattcaagtcttcggaatattcatgtct 20570239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 31271738 - 31271621
Alignment:
Q  11 caaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttat 110  Q
    |||||||||| ||| ||| |||||||| || || |||  ||| ||||||||||| ||||||||||| ||| ||||||| || |||||| | |||| ||      
T  31271738 caaacaaactaacatcatccatgttaatagcataaaatggcataatatatatgcctacaaatatgactatcttcaagttttgagaatacttatgttttcg 31271639  T
Q  111 gatctacaacgttgacga 128  Q
     |||||||||||||||||    
T  31271638 aatctacaacgttgacga 31271621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 36868382 - 36868253
Alignment:
Q  14 acaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgatta---------tattcaagtcttcagaatattcatg 104  Q
    ||||||||||||||| |||||||| || || |||| ||||| || |||||| ||||||||||| ||         |||||| |||| ||||||| |||||    
T  36868382 acaaactcacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactaatacgactatattcatgtctccagaatactcatg 36868283  T
Q  105 tcttatgatctacaacgttgacgacgccaa 134  Q
    |||  |||||| ||||||||||||||||||    
T  36868282 tctcctgatctgcaacgttgacgacgccaa 36868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 6431195 - 6431295
Alignment:
Q  45 aaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    |||| ||||| || |||||| ||||||||||| |||||| |||||| | ||||| |||||||||  ||||| |||| |||||||||| ||  ||||||||    
T  6431195 aaacggcaaagtacatatgcatacaaatatgactatatttaagtctccggaatactcatgtcttcagatctgcaacattgacgacgcaaaagtcattgat 6431294  T
Q  145 c 145  Q
    |    
T  6431295 c 6431295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 15673721 - 15673853
Alignment:
Q  12 aaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatg 111  Q
    ||||||||||||||||| |||||||| || || |||| ||||||||   | || |||| |||||| |||||| |||||| | |||||| |||||||   |    
T  15673721 aaacaaactcacaacatccatgttaatagcataaaacggcaaaatactaaagcctacacatatgactatatttaagtctccggaatatccatgtctccag 15673820  T
Q  112 atctacaacgttgacgacgccaatatcattgat 144  Q
    |||| |||| |||||||| ||||  ||||||||    
T  15673821 atctgcaacattgacgactccaaagtcattgat 15673853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 17767324 - 17767439
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |    ||||| ||| ||||| ||||||||||| |||||||||||||  | |||| ||||||||   ||    
T  17767324 aacaaactcacaacatccatgttaatagcataag---gcaaagtatctatgcctacaaatatgactatattcaagtctcaataatactcatgtctccgga 17767420  T
Q  113 tctacaacgttgacgacgc 131  Q
    ||| |||||||||||||||    
T  17767421 tctgcaacgttgacgacgc 17767439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 44942595 - 44942531
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||||||| | ||||| |||||||||  ||||| ||||||||||||||||||    
T  44942595 aatatgactatattcaagtctccggaatactcatgtcttcggatctgcaacgttgacgacgccaa 44942531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 27665915 - 27665836
Alignment:
Q  8 ttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaag 87  Q
    |||| ||||||||||||||||  ||||||| ||||| ||||| || | || |||||| ||||||||||| ||||||||||    
T  27665915 ttgcgaacaaactcacaacatctatgttaatagtataaaacatcatagtacatatgcctacaaatatgactatattcaag 27665836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 34471335 - 34471272
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| || || |||| |||||||| |||||| |||||||||||    
T  34471335 aacaaactcacaacatccatgttaatagcataaaacggcaaaatacatatgcctacaaatatga 34471272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 25068169 - 25068095
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||| ||||||||||| ||||||||||||||| ||||  || |||||   ||||| ||||||||||||||||||    
T  25068169 tatgcctacaaatatgactatattcaagtcttcggaatcctcttgtctccggatctgcaacgttgacgacgccaa 25068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 2251101 - 2251222
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    ||||||||||| |||| |||||||| || || |||| ||||| || ||| || ||||||||||| |||||| || ||| | |||||  |||| |||  ||    
T  2251101 aacaaactcacgacatccatgttaatagcataaaactgcaaagtacataagcctacaaatatgactatattaaaatctccggaataaccatgccttcgga 2251200  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||| ||||||||    
T  2251201 tctgcaacgttgatgacgccaa 2251222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 30933608 - 30933536
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattca 85  Q
    |||||||||||||||| |||||||| || || |||| | ||||||| ||||| || |||||||| ||||||||    
T  30933608 aacaaactcacaacatccatgttaatagcataaaacggaaaaatatttatgcctataaatatgactatattca 30933536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 34962888 - 34962952
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||| ||| ||||||  |||||||||  ||||| ||||||||||||||||||    
T  34962888 aatatgactatattcaaatctccagaatcctcatgtcttcggatctgcaacgttgacgacgccaa 34962952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 12183118 - 12183229
Alignment:
Q  45 aaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    ||||| |||||||| || |  ||||||||||||| ||| ||||||||||||||| | | ||||   ||||||||||||| |||||| |||  ||||| ||    
T  12183118 aaacatcaaaatatgtaagtctacaaatatgattgtatgcaagtcttcagaatagttaagtctctggatctacaacgtttacgacgtcaaagtcatttat 12183217  T
Q  145 ctaatttgcact 156  Q
      ||||||||||    
T  12183218 tgaatttgcact 12183229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 20560879 - 20560942
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| ||||| |||| ||||| || | |||| |||||||||||    
T  20560879 aacaaactcacaacatccatgttaatagtataaaacggcaaagtacacatgcctacaaatatga 20560942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 25622798 - 25622929
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || ||||  |||| || | | || |||| |||||| |||||| |||||| | ||||| |||||||||   |    
T  25622798 aacaaactcacaacatccatgttaatagcataaaacgtcaaagtacaaaagcctacacatatgactatattaaagtctccggaatactcatgtcttcgaa 25622897  T
Q  113 tctacaacgttgacgacgccaatatcattgat 144  Q
    |||  ||||||||||||| |||  ||||||||    
T  25622898 tctgtaacgttgacgacgtcaaagtcattgat 25622929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 2763281 - 2763395
Alignment:
Q  12 aaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatg 111  Q
    |||||||| |||| |||  ||||||| ||||| ||| | |||  || |||||| || |||||||||||||||||| |||  | |||| |||||||||  |    
T  2763281 aaacaaacgcacatcatttatgttaatagtataaaataacaatgtacatatgcctataaatatgattatattcaaatctctaaaatactcatgtcttcgg 2763380  T
Q  112 atctacaacgttgac 126  Q
    |||| ||||||||||    
T  2763381 atctgcaacgttgac 2763395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 5071124 - 5071194
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatatt 83  Q
    |||||||||||||||| |||||||| || || |||| ||| |||| ||| || ||||||||||| ||||||    
T  5071124 aacaaactcacaacatccatgttaatagcataaaacggcataatacataagcctacaaatatgactatatt 5071194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 25237085 - 25237179
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtct 107  Q
    |||||||||||||||| |||||||| |  || |||| |||||||| | | || |||| ||||||||||||| |||||  | ||||| ||||||||    
T  25237085 aacaaactcacaacatccatgttaataacataaaacggcaaaatagaaaagcctacacatatgattatatttaagtcccccgaatactcatgtct 25237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 8027758 - 8027879
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||| |  ||||||| || || |||| ||| | ||| ||||| |||||||||||||||||| |||| |   ||||| |||||||||  ||    
T  8027758 aacaaactcacaacttttatgttaatagcataaaacggcatagtatctatgcctacaaatatgattatatttaagtatctcgaatactcatgtcttcaga 8027857  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    |||  ||| |||||||| ||||    
T  8027858 tctgtaacattgacgacaccaa 8027879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 13268932 - 13268811
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||| ||||| |||||||| |  || |||||||||| || | | ||||||| || ||| |||||||||||||   ||||| |||||||    ||    
T  13268932 aacaaactcataacatccatgttaatatcataaaacagcaaagtacaaaagcttacacatgtgactatattcaagtctctggaatactcatgtccccgga 13268833  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||| ||||||||    
T  13268832 tcttcaacgttgaagacgccaa 13268811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 35354000 - 35353879
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || ||||| |||| || ||| || || |||||||| |||||| || ||| |  |||| ||||| ||   ||    
T  35354000 aacaaactcacaacatccatgttaatagcataaaacaacaaagtacataagcctataaatatgactatattaaaatctccgaaatagtcatgcctccgga 35353901  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||| ||||||||    
T  35353900 tctgcaacgttgatgacgccaa 35353879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 41797970 - 41797909
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatat 74  Q
    |||||||||||| ||| |||||||| || || |||| ||||| ||||||||| |||||||||    
T  41797970 aacaaactcacatcatccatgttaatagcataaaacggcaaagtatatatgcctacaaatat 41797909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 45694263 - 45694324
Alignment:
Q  69 aaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacg 130  Q
    |||||| | |||||||||||||   |||||||||||||||  ||||| ||||||||||||||    
T  45694263 aaatattactatattcaagtctctggaatattcatgtcttcggatctgcaacgttgacgacg 45694324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 12704996 - 12704932
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    |||||||||||||||| |||| ||||||| ||||||||    |||| || |||||||||||||||    
T  12704996 aatatgattatattcatgtctccagaatactcatgtctccgaatctgcagcgttgacgacgccaa 12704932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 12994027 - 12994059
Alignment:
Q  66 tacaaatatgattatattcaagtcttcagaata 98  Q
    |||||||||||||||||||||||||| ||||||    
T  12994027 tacaaatatgattatattcaagtctttagaata 12994059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 17267938 - 17267998
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacg 130  Q
    ||||||| ||||||||||||||| ||||| |||| |||   ||||| ||||||||||||||    
T  17267938 aatatgactatattcaagtcttcggaatactcatttctacggatctgcaacgttgacgacg 17267998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 29098155 - 29098026
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || |||| ||||  || |||||| ||||||||||| ||||||||||||| | ||||  ||||||||  |||    
T  29098155 aacaaactcacatcatacatgttaatagcataaaacggcaaggtacatatgcctacaaatatgactatattcaagtctccggaatcctcatgtctcttga 29098056  T
Q  113 tctacaacgttgacgacgccaatatcattg 142  Q
    ||| |||||||||||||||||| |||||||    
T  29098055 tctgcaacgttgacgacgccaaaatcattg 29098026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 25962276 - 25962147
Alignment:
Q  16 aaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatct 115  Q
    ||||||||||||| |||||||| || || ||||  |||| ||| ||||| ||||||||||| ||||||||||| | | |||||| |||||||   |||||    
T  25962276 aaactcacaacattcatgttaatagcataaaacgacaaagtatctatgcctacaaatatgactatattcaagtttccggaatatccatgtctccggatct 25962177  T
Q  116 acaacgttgacgacgccaatatcattgatc 145  Q
    |||||||||||||||| ||  |||||||||    
T  25962176 acaacgttgacgacgcaaaagtcattgatc 25962147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 11734591 - 11734668
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    |||||||||||||||  |||||||| || || |||| ||||| || |||||| ||||||||||| |||||||||||||    
T  11734591 aacaaactcacaacaaccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactatattcaagtct 11734668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 23428618 - 23428497
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || |||| | ||| ||  ||||| ||||||||||| |||||| | |||| |  |||| ||||||||   ||    
T  23428618 aacaaactcacatcatccatgttaatagcataaaacggaaaagtacctatgcctacaaatatgactatatttatgtctccgaaatactcatgtctccgga 23428519  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||||||||||||||||||||||    
T  23428518 tctacaacgttgacgacgccaa 23428497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 32347469 - 32347590
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    ||||||||||  |||| |||||||| || || |||| ||||| ||  ||||| ||||||||||| |||||||| || ||| ||||| ||||||||   ||    
T  32347469 aacaaactcaatacatccatgttaatagcataaaacggcaaagtagttatgcctacaaatatgactatattcatgttttcggaatactcatgtctccgga 32347568  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||| ||||||||||||||    
T  32347569 tctgcaatgttgacgacgccaa 32347590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 42396325 - 42396389
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    |||||||||||||||| ||||  |||||| |||||||| | ||||| ||||||||||||||||||    
T  42396325 aatatgattatattcatgtctcaagaatactcatgtctcaggatctgcaacgttgacgacgccaa 42396389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 6281419 - 6281356
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||| ||| |||||||| || || ||||||||||||| |||||| |||||||||||    
T  6281419 aacaaactcacatcatccatgttaatagcataaaacagcaaaatacatatgcctacaaatatga 6281356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 12524418 - 12524549
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||   |||| || | | || |||||||||||||||||| |||||| |  || | |||||||||  ||    
T  12524418 aacaaactcacaacattcatgttaatagcataaaatgacaaagtacaaaagcctacaaatatgattatattaaagtctcctaaacaatcatgtctttgga 12524517  T
Q  113 tctacaacgttgacgacgccaatatcattgat 144  Q
    ||||||||||||| ||| ||||  ||||||||    
T  12524518 tctacaacgttgatgacaccaaagtcattgat 12524549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 7151118 - 7151032
Alignment:
Q  66 tacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgatctaatttg 152  Q
    |||||| |||| ||||||||||||||| ||||| | ||||||   ||||| ||||||||| ||||||||  ||||||||| ||||||    
T  7151118 tacaaacatgactatattcaagtcttcggaatactaatgtctctggatctgcaacgttgatgacgccaaagtcattgatcgaatttg 7151032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 39531158 - 39531288
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga---------ttatattcaagtcttcagaatattcat 103  Q
    |||||||||||| ||| |||||||| || || |||| ||||| || |||||| |||||||||||         |||||||||||||| | ||||| ||||    
T  39531158 aacaaactcacatcatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactaacatgattatattcaagtctccggaatactcat 39531257  T
Q  104 gtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||   ||||| ||||||||||||||||||    
T  39531258 gtctctggatctgcaacgttgacgacgccaa 39531288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 17518117 - 17518162
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgt 105  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  17518117 tatgcctacaaatatgattgtattcaagtcttcagaatactcatgt 17518162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 35402353 - 35402268
Alignment:
Q  59 atatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    |||||| ||||||||||| |||||||||||||   ||||| | ||||||   ||||||||||||||| || ||||| |||||||||    
T  35402353 atatgcctacaaatatgactatattcaagtctctggaatactgatgtctctagatctacaacgttgatgatgccaaaatcattgat 35402268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 6635557 - 6635493
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||||||||||||| ||| | ||||| ||||||||   ||||| ||||||||||||||||||    
T  6635557 aatatgattatattcaaatctccggaatactcatgtctccggatctgcaacgttgacgacgccaa 6635493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 20483495 - 20483431
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||| | |||||| ||||| |||||||||  ||||| ||||||||||||||||||    
T  20483495 aatatgactatatttatgtcttcggaatactcatgtcttcagatctgcaacgttgacgacgccaa 20483431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 25770913 - 25770845
Alignment:
Q  66 tacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||||||||| |||||||||||||| |||| ||||| |||   |||| |||| |||||||||||||    
T  25770913 tacaaatatgattgtattcaagtcttcataatagtcatgccttcgaatctgcaacattgacgacgccaa 25770845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2555096 - 2555159
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| ||  | |||| |||||||| |||||| |||||||||||    
T  2555096 aacaaactcacaacatccatgttaatagcgtaaaacggcaaaatacatatgcctacaaatatga 2555159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 17732132 - 17732195
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| || || |||| ||||| || |||||| |||||||||||    
T  17732132 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatga 17732195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 3079080 - 3079146
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgatta 79  Q
    |||||||||||| ||| |||||||| |  || |||| |||||||| |||||| ||||||||||||||    
T  3079080 aacaaactcacagcatccatgttaataacataaaacggcaaaatacatatgcctacaaatatgatta 3079146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 42505157 - 42505235
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtctt 91  Q
    |||||||||||||||| |||||||| || || ||||  || | ||| ||||| ||||||||||| |||||| |||||||    
T  42505157 aacaaactcacaacatccatgttaatagcatgaaacgacagagtatctatgcctacaaatatgactatattaaagtctt 42505235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 33164281 - 33164342
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgc 131  Q
    ||||||||||||||||||||| | ||||  ||||||||   ||||| |||||||||||||||    
T  33164281 aatatgattatattcaagtctccggaatcctcatgtctccggatctgcaacgttgacgacgc 33164342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 40564911 - 40565032
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    ||||||||||||||||  ||||||| || || ||||  |||| || ||| || ||||||||||| |||||| || ||| | |||||  |||||||   ||    
T  40564911 aacaaactcacaacatctatgttaatagcataaaacgacaaagtacataagcctacaaatatgactatattaaaatctccggaatagccatgtctccgga 40565010  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||| ||||||||    
T  40565011 tctgcaacgttgatgacgccaa 40565032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 6681688 - 6681760
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattg 142  Q
    ||||||| ||||||||||||| | ||||| ||||||||    |||| ||||||||||||| |||| |||||||    
T  6681688 aatatgactatattcaagtctccggaatactcatgtctccgaatctgcaacgttgacgacaccaaaatcattg 6681760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 7771633 - 7771697
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||||| |||| | ||||| ||||||||   ||||| ||||||||||||||||||    
T  7771633 aatatgactatattcatgtctccggaatactcatgtctccggatctgcaacgttgacgacgccaa 7771697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 18472480 - 18472596
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || ||||| |||| ||   | || |||| |||||| |||||  |||||| | ||||| ||||||||   ||    
T  18472480 aacaaactcacatcatccatgttaatagcataaaacaacaaagtactaaagcctacacatatgactatatgtaagtctccggaatactcatgtctccaga 18472579  T
Q  113 tctacaacgttgacgac 129  Q
    |||||||||||||||||    
T  18472580 tctacaacgttgacgac 18472596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 38273272 - 38273136
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatg 104  Q
    ||||||| |||||||||||||||| |||||||| || || |||||||||| || ||||||  |||||||||| ||||||||||||| |  || | || ||    
T  38273272 aatttgctaacaaactcacaacatccatgttaatagcataaaacagcaaagtacatatgccaacaaatatgactatattcaagtctccgaaacactcttg 38273173  T
Q  105 tcttatgatctacaacgttgacgacgccaatatcatt 141  Q
    | |   |||||||||||||||||||||||| ||||||    
T  38273172 tttctggatctacaacgttgacgacgccaaaatcatt 38273136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 29352582 - 29352454
Alignment:
Q  17 aactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatcta 116  Q
    |||||||||||| |||||||| ||||| ||| || ||| || |||||| ||||||||||| ||||||||||||||  ||||| |||| |||   |||||     
T  29352582 aactcacaacattcatgttaatagtataaaatagaaaagtacatatgcctacaaatatgactatattcaagtctttggaatactcatctctccggatctg 29352483  T
Q  117 caacgttgacgacgccaatatcattgatc 145  Q
    ||||||||||||||| ||  |||||||||    
T  29352482 caacgttgacgacgcaaaagtcattgatc 29352454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 17473507 - 17473628
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||  ||||| || |||||||||||||||||| |||||||  |||| | ||||| ||||||||   ||    
T  17473507 aacaaactcacaacatccatgttaataggataaaatggcaaagtacatatgcttacaaatatgactatattcctgtctccggaatactcatgtctctgga 17473606  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| | ||||||||||||||||    
T  17473607 tctgcgacgttgacgacgccaa 17473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 17579707 - 17579586
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||  ||||| || |||||||||||||||||| |||||||  |||| | ||||| ||||||||   ||    
T  17579707 aacaaactcacaacatccatgttaataggataaaatggcaaagtacatatgcttacaaatatgactatattcctgtctccggaatactcatgtctctgga 17579608  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| | ||||||||||||||||    
T  17579607 tctgcgacgttgacgacgccaa 17579586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 37375801 - 37375922
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || ||||  |||| || |||||| ||||||||||| |||||||| |||| | ||||| ||||||||   ||    
T  37375801 aacaaactcacagcatccatgttaatagcataaaacgacaaagtacatatgcctacaaatatgactatattcatgtctcctgaatactcatgtctccaga 37375900  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||||||||    
T  37375901 tctgcaacgttgacgacgccaa 37375922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 21954575 - 21954722
Alignment:
Q  9 tgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtctt 108  Q
    |||| ||||||||| ||||| |||||||| || || |||| | ||||||| ||||| |  |||||||| ||||||||||| | | ||||| ||||| ||     
T  21954575 tgcagacaaactcagaacatccatgttaatagcataaaacggaaaaatatctatgcctgtaaatatgactatattcaagtgtccggaatactcatgactc 21954674  T
Q  109 atgatctacaacgttgacgacgccaatatcattgatctaatttgcact 156  Q
      ||||| ||||||||||||||||||  |||||||||  |||||||||    
T  21954675 cggatctgcaacgttgacgacgccaaagtcattgatcggatttgcact 21954722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 25876682 - 25876764
Alignment:
Q  59 atatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcatt 141  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||||||  ||||| ||| |||||| ||| ||| ||||||    
T  25876682 atatgcctacaaatatgattatattcaagttttcagaatgttcatgtcttcggatctgcaatgttgacaacgtcaaaatcatt 25876764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 32741118 - 32740989
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || ||||| |||| ||||||||| ||||||||||| |||||| | ||||   ||||| ||||||||   ||    
T  32741118 aacaaactcacaacatccatgttaatagcataaaacaacaaagtatatatgcctacaaatatgactatatttatgtctctggaatactcatgtctccgga 32741019  T
Q  113 tctacaacgttgacgacgccaatatcattg 142  Q
    | | |||||||  ||||||||| |||||||    
T  32741018 tttgcaacgttagcgacgccaaaatcattg 32740989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 45482430 - 45482317
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || ||||  |||| ||| ||| | ||||||||||| ||||||||||||| | ||||| ||||||||   ||    
T  45482430 aacaaactcacaacatccatgttaatagcataaaacgacaaagtatctatacctacaaatatgactatattcaagtctccggaatactcatgtctccgga 45482331  T
Q  113 tctacaacgttgac 126  Q
    ||| ||||||||||    
T  45482330 tctgcaacgttgac 45482317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 25531821 - 25531701
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatg 104  Q
    ||||||| |||||||  ||||||| |||||||| || || || || || | ||| ||||| ||||||||||| ||||||||||| |  ||||||||||||    
T  25531821 aatttgcgaacaaaccaacaacatccatgttaatagcataaaccaacagagtatctatgcctacaaatatgactatattcaagtatgtagaatattcatg 25531722  T
Q  105 tcttatgatctacaacgttga 125  Q
    ||| | ||||  |||||||||    
T  25531721 tctcaggatcagcaacgttga 25531701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 17508950 - 17509013
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| || || |||| ||||| || ||||||||||||||||||    
T  17508950 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacatatgcttacaaatatga 17509013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 17544264 - 17544201
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| || || |||| ||||| || ||||||||||||||||||    
T  17544264 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacatatgcttacaaatatga 17544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 35141417 - 35141496
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttc 92  Q
    |||||||||||||||| |||||||| | ||| ||||| ||||||| | | || |||| |||||| |||||||||||||||    
T  35141417 aacaaactcacaacatccatgttaataatataaaacaacaaaatacaaaagcatacatatatgactatattcaagtcttc 35141496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 39707612 - 39707550
Alignment:
Q  45 aaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtct 107  Q
    |||| ||||| ||||||||| |||||||| |||||||||||||||| | ||||| ||||||||    
T  39707612 aaacggcaaagtatatatgcatacaaatacgattatattcaagtctccggaatactcatgtct 39707550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 45457302 - 45457432
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttaca---------aatatgattatattcaagtcttcagaatattcat 103  Q
    |||||||||||||||| ||| |||| || || |||| ||||||||||||||| ||||         ||||||| |||||||| |||| ||||||| ||||    
T  45457302 aacaaactcacaacatccatattaatagcataaaacggcaaaatatatatgcctacaaacaggactaatatgactatattcatgtctccagaatactcat 45457401  T
Q  104 gtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||   ||||| ||||||||||||| ||||    
T  45457402 gtctccggatctgcaacgttgacgactccaa 45457432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 21552209 - 21552330
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| |  || |||||||||| || ||| || ||||||||||| |||||| || ||| |  |||| ||||| |||  ||    
T  21552209 aacaaactcacatcatccatgttaataacataaaacagcaaagtacataagcctacaaatatgactatattaaaatctccgaaatagtcatgccttcgga 21552308  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||| ||||||||    
T  21552309 tctgcaacgttgatgacgccaa 21552330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 36719307 - 36719428
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||| || || ||  ||||| ||||||||||| |||||||| |||| |  |||| ||||||||   ||    
T  36719307 aacaaactcacaacatccatgttaatagcataaaacggcgaagtacttatgcctacaaatatgactatattcatgtctccgaaatactcatgtctccgga 36719406  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    |||  |||||||| ||||||||    
T  36719407 tctggaacgttgatgacgccaa 36719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 39532721 - 39532786
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgatt 78  Q
    |||||||||||| ||| |||||||| || || |||| ||||| ||||||||| |||||||||||||    
T  39532721 aacaaactcacatcattcatgttaatagcataaaacggcaaagtatatatgcatacaaatatgatt 39532786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 9719785 - 9719857
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattg 142  Q
    |||||||||||||||  ||||   ||||| ||||||||| |||||| |||||||||| ||||||| |||||||    
T  9719785 aatatgattatattcttgtctctggaatactcatgtcttctgatctgcaacgttgactacgccaaaatcattg 9719857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 9137316 - 9137173
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || |||   |||| ||  ||||  ||||||||||| || |||||||||| | ||||| | ||||||   ||    
T  9137316 aacaaactcacatcatccatgttaatagcataaaatgacaaagtacttatgtctacaaatatgactaaattcaagtctccggaatacttatgtctccgga 9137217  T
Q  113 tctacaacgttgacgacgccaatatcattgatctaatttgcact 156  Q
    ||| ||||||||||||||||||  ||| ||||| ||| ||||||    
T  9137216 tctgcaacgttgacgacgccaaagtcaatgatcgaatatgcact 9137173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 42645030 - 42644967
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| || || |||| ||||| || |||||| |||||||||||    
T  42645030 aacaaactcacaacatccatgttaatagcataaaacggcaaattacatatgcctacaaatatga 42644967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 45949465 - 45949564
Alignment:
Q  45 aaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    |||||||||| || ||| || ||||||||||| |||||| || ||| | ||||| ||||| ||   ||||| ||||||||||||||||||  ||||||||    
T  45949465 aaacagcaaagtacataagcctacaaatatgactatattaaaatctccggaatagtcatgcctccggatctgcaacgttgacgacgccaaagtcattgat 45949564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 9137720 - 9137646
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||| |||||||||||  |||||||||||||| ||||| |||||| |   ||| | ||||||||||||||||||    
T  9137720 tatgcctacaaatatgagcatattcaagtcttcggaatactcatgtatctggatttgcaacgttgacgacgccaa 9137646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 44482660 - 44482749
Alignment:
Q  45 aaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    |||| ||||| || |||||| ||||||||||| |||||| | |||| | ||||| ||||||||   ||||| ||||||||||||| ||||    
T  44482660 aaacggcaaagtacatatgcctacaaatatgactatattaatgtctccggaatactcatgtctccggatctgcaacgttgacgacaccaa 44482749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 46025801 - 46025878
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    |||||||||||| ||| |||||||| || || ||||  |||| || |||||| ||||||||||| |||||||| ||||    
T  46025801 aacaaactcacagcatccatgttaatagcataaaacgacaaagtacatatgcctacaaatatgactatattcatgtct 46025878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 26638420 - 26638488
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacga 128  Q
    ||||| ||||||||||| ||||||||||| | || |||| |||||||||  ||||||||| ||| ||||    
T  26638420 tatgcatacaaatatgaatatattcaagtgtccaaaatactcatgtcttcggatctacaatgttcacga 26638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 26638497 - 26638565
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacga 128  Q
    ||||| ||||||||||| ||||||||||| | || |||| |||||||||  ||||||||| ||| ||||    
T  26638497 tatgcatacaaatatgaatatattcaagtgtccaaaatactcatgtcttcggatctacaatgttcacga 26638565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 32643277 - 32643213
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||||||||||||||||| | ||||  ||||||||   ||||| |||||| |||||||||||    
T  32643277 aatatgattatattcaagtctccggaatcctcatgtctccggatctgcaacgtggacgacgccaa 32643213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 33530288 - 33530360
Alignment:
Q  72 tatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    ||||| ||||||||||||| |  |||| |||||||| | ||||| ||||||||| ||||||||  ||||||||    
T  33530288 tatgactatattcaagtctccgaaatactcatgtctcaggatctgcaacgttgatgacgccaaattcattgat 33530360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 38649112 - 38649244
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtctt-atg 111  Q
    |||||||||||||||| |||||||| || |  |||| ||||| ||   | ||||||| |||||| |||||| |||||| | |||||  ||||||||   |    
T  38649112 aacaaactcacaacatccatgttaatagcaaaaaacggcaaagtactaaagcttacacatatgactatatttaagtctccggaatacccatgtcttccag 38649211  T
Q  112 atctacaacgttgacgacgccaatatcattgat 144  Q
    |||||||| ||||||||| ||||  ||||||||    
T  38649212 atctacaatgttgacgactccaaagtcattgat 38649244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 12654064 - 12654196
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || ||||  ||||||| |||||| ||||||||||| ||||||||||||| | ||||| ||||||||    |    
T  12654064 aacaaactcacatcatccatgttaatagcataaaacgacaaaatacatatgcctacaaatatgactatattcaagtctccggaatactcatgtctccgaa 12654163  T
Q  113 tctacaacgttgacgacgccaatatcattgatc 145  Q
    ||| ||||||||| ||||||||  |||||||||    
T  12654164 tctgcaacgttgatgacgccaaagtcattgatc 12654196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 12481125 - 12481246
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || |||| ||||  ||  ||||| ||||||||||| ||||||||||||| | ||||  ||||||||   ||    
T  12481125 aacaaactcacatcatccatgttaatagcataaaacggcaaggtacctatgcctacaaatatgactatattcaagtctccggaatcctcatgtctccgga 12481224  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||||||||    
T  12481225 tctgcaacgttgacgacgccaa 12481246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 20028470 - 20028537
Alignment:
Q  22 acaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtc 89  Q
    |||||||  ||||||| ||||| |||| ||| ||||||||||| ||||||||||| ||||||||||||    
T  20028470 acaacatcaatgttaatagtataaaacggcagaatatatatgcctacaaatatgactatattcaagtc 20028537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 1106613 - 1106743
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga---------ttatattcaagtcttcagaatattcat 103  Q
    |||||||||||| ||| |||||||| || || |||| ||||| || |||||| |||||||||||         |||||||||||||| | ||||| ||||    
T  1106613 aacaaactcacatcatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactaacatgattatattcaagtctccggaatactcat 1106712  T
Q  104 gtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||   ||||| ||||||||||||||||||    
T  1106713 gtctccggatctgcaacgttgacgacgccaa 1106743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 1944391 - 1944325
Alignment:
Q  78 tatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    ||||||||| |||||||||||||||||||||  ||| | |||||| ||||||||||| || ||||||    
T  1944391 tatattcaaatcttcagaatattcatgtcttcggatatgcaacgtggacgacgccaaaattattgat 1944325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 13871438 - 13871524
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgatctaatttgcact 156  Q
    ||||||| |||||||| |||| | ||||| ||||||||   ||||| ||||||||||||||||||  |||||||||  |||||||||    
T  13871438 aatatgactatattcatgtctccggaatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgatcagatttgcact 13871524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 20496553 - 20496422
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| ||| |||| || || |||| ||||| || | | || |||| |||||| ||||||||||||| | |||||  ||| ||| | ||    
T  20496553 aacaaactcacaacatccatattaatagcataaaacggcaaagtacaaaagcctacacatatgactatattcaagtctccggaatacccatctctcaaga 20496454  T
Q  113 tctacaacgttgacgacgccaatatcattgat 144  Q
    | | ||||||||||||| ||||  ||||||||    
T  20496453 tatgcaacgttgacgacaccaaagtcattgat 20496422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 35039051 - 35038989
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatat--atatgcttacaaata 73  Q
    |||||||||||||||| |||||||| || || ||||| ||||||||  |||||||||||||||    
T  35039051 aacaaactcacaacatccatgttaatagcataaaacaacaaaatatatatatgcttacaaata 35038989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 14730988 - 14730910
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatatt 83  Q
    ||||||| |||||||||||| ||| |||||||| |  || ||||| || | || |||||| ||||||||||||||||||    
T  14730988 aatttgcgaacaaactcacatcatccatgttaataacataaaacatcatagtacatatgcctacaaatatgattatatt 14730910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 4660803 - 4660726
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    |||||||||||| ||| |||||||| || || ||||  |||| || |||||| |||||||||||||||| ||| ||||    
T  4660803 aacaaactcacatcatccatgttaatagcataaaacgacaaagtacatatgcctacaaatatgattatactcatgtct 4660726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 5416978 - 5417055
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    |||||||||||||||| |||||||| || || |||| ||||| || | | || |||| |||||| |||||||||||||    
T  5416978 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacaaaagcatacacatatgactatattcaagtct 5417055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 4394079 - 4394015
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||||||||||   ||||| ||||||||   ||||| ||||||||||||||||||    
T  4394079 aatatgactatattcaagtctcatgaatactcatgtctccggatctgcaacgttgacgacgccaa 4394015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 23101220 - 23101284
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||||| |||| | ||||| ||||||||   ||||| ||||||||||||||||||    
T  23101220 aatatgactatattcacgtctccggaatactcatgtctccggatctgcaacgttgacgacgccaa 23101284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 23654559 - 23654495
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||||||| | ||||  ||||||||   ||||| ||||||||||||||||||    
T  23654559 aatatgactatattcaagtctcctgaatcctcatgtctccggatctgcaacgttgacgacgccaa 23654495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 40862580 - 40862711
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||| ||||| |||||||| || || ||||  || | ||  ||||| ||||||||||| ||||||  ||||||||||||| ||||||||   ||    
T  40862580 aacaaactcaaaacatccatgttaatagcataaaacgacagagtacttatgcctacaaatatgactatattttagtcttcagaatactcatgtctctgga 40862679  T
Q  113 tctacaacgttgacgacgccaatatcattgat 144  Q
    ||| |||||||||||||||||| |||||||||    
T  40862680 tctgcaacgttgacgacgccaaaatcattgat 40862711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 47551455 - 47551324
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    ||||||||||||||||  ||||||| || || |||  ||||| ||| ||||| ||||||||||| ||||||||||||| ||||||| |||||| |   ||    
T  47551455 aacaaactcacaacatctatgttaatagcataaaatggcaaagtatctatgcctacaaatatgactatattcaagtctccagaatactcatgtttccgga 47551356  T
Q  113 tctacaacgttgacgacgccaatatcattgat 144  Q
    ||| |||||||||||||| |||  ||||||||    
T  47551355 tctgcaacgttgacgacgtcaaagtcattgat 47551324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 10304942 - 10304823
Alignment:
Q  9 tgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtctt 108  Q
    |||||||||||||||||||| ||| |||| || || |||  ||| | ||| ||||| ||||||||||| ||||||||||||||| |||||| |||||||     
T  10304942 tgcaaacaaactcacaacatccattttaatagcataaaattgcagagtatctatgcatacaaatatgactatattcaagtcttcggaatatccatgtctc 10304843  T
Q  109 atgatctacaacgttgacga 128  Q
       |||| ||||||||||||    
T  10304842 cgaatctgcaacgttgacga 10304823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 12871981 - 12871838
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||  || || ||||  |||| || |||||| ||||| ||||| ||||||||||||| | ||||| ||||||||   ||    
T  12871981 aacaaactcacagcatccatgttattagcataaaacgacaaagtacatatgcctacaagtatgactatattcaagtctccggaatactcatgtctctgga 12871882  T
Q  113 tctacaacgttgacgacgccaatatcattgatctaatttgcact 156  Q
    ||| |||||||||||| |||||  ||||||||| ||| ||||||    
T  12871881 tctgcaacgttgacgatgccaaagtcattgatcgaatctgcact 12871838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 28399090 - 28399167
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    |||||||||||| ||| |||||||| || || |||| ||||| || |||||||||||||||||| |||||||||||||    
T  28399090 aacaaactcacatcatccatgttaatagcataaaacggcaaagtacatatgcttacaaatatgactatattcaagtct 28399167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 32879021 - 32878936
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgatc 145  Q
    ||||| ||||||||||| ||||||||||| ||| ||||| ||||||||   ||||||||||||||||||| ||||  |||||||||    
T  32879021 tatgcctacaaatatgactatattcaagttttcggaatactcatgtctccggatctacaacgttgacgacaccaaagtcattgatc 32878936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 45425282 - 45425367
Alignment:
Q  59 atatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    |||||| ||||||||||||||||||||| |||  | ||||||||||||||| |||||||||| ||  |||||||||  ||||||||    
T  45425282 atatgcctacaaatatgattatattcaattctctataatattcatgtcttaggatctacaacattatcgacgccaacgtcattgat 45425367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 6158837 - 6158886
Alignment:
Q  59 atatgcttacaaatatgattatattcaagtcttcagaatattcatgtctt 108  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  6158837 atatgcctacaaatatgactatattcaagtcttcagaatactcatgtctt 6158886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 26771466 - 26771350
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||  |||||||| || || ||||  |||| || | | || |||| |||||| ||||||||||||| |  ||||||||||||||  ||    
T  26771466 aacaaactcacaacaaccatgttaatagcataaaacgacaaagtacaaaagcctacacatatgactatattcaagtctccgaaatattcatgtcttcgga 26771367  T
Q  113 tctacaacgttgacgac 129  Q
    ||| |||||||||||||    
T  26771366 tctgcaacgttgacgac 26771350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 4870788 - 4870907
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||   || |||||||| || || ||||  |||| ||| ||||| |  |||||||| |||||||| |||| ||||||| ||||||||   ||    
T  4870788 aacaaactcactgaatccatgttaatagcataaaacgacaaagtatctatgcctgtaaatatgactatattcatgtctccagaatactcatgtctccgga 4870887  T
Q  113 tctacaacgttgacgacgcc 132  Q
    ||||||||||||||||||||    
T  4870888 tctacaacgttgacgacgcc 4870907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 13691517 - 13691587
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatatt 83  Q
    |||||||||||||||| |||||||| || || |||| |||||||| ||| || ||||||||||| ||||||    
T  13691517 aacaaactcacaacatccatgttaatagcataaaacggcaaaatacataagcctacaaatatgactatatt 13691587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 9298180 - 9298309
Alignment:
Q  16 aaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatct 115  Q
    ||||||||||||| |||||||| ||||| |||   |||| ||  ||||| || |||||||||||||||||||||| |  |||| |||| |||   |||||    
T  9298180 aaactcacaacatccatgttaatagtataaaatgacaaagtacctatgcctataaatatgattatattcaagtctccgaaatactcatatctccggatct 9298279  T
Q  116 acaacgttgacgacgccaatatcattgatc 145  Q
     || ||||||||| |||||  |||||||||    
T  9298280 gcatcgttgacgatgccaaagtcattgatc 9298309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 18343930 - 18343857
Alignment:
Q  61 atgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    |||| ||||||||||| ||||||||||||| | ||||  ||||||||   ||||| ||||||||||||||||||    
T  18343930 atgcctacaaatatgactatattcaagtctccggaatcctcatgtctccggatctgcaacgttgacgacgccaa 18343857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 23791354 - 23791269
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaata 98  Q
    ||||||||||||||||  ||||||| ||||| ||||| ||||  | |||  ||||||||||||| ||||||||||| |||| ||||    
T  23791354 aacaaactcacaacatttatgttaatagtataaaacaacaaagcacataaacttacaaatatgactatattcaagtgttcataata 23791269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 13152800 - 13152668
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| ||||| || || || |||| ||||| || |||||| |||||||| || |||| ||| |||| | ||||| | ||||||  |||    
T  13152800 aacaaactcacatcatccatgtcaatagcataaaacggcaaagtacatatgcctacaaatacgactataatcatgtctccggaatacttatgtctcttga 13152701  T
Q  113 tctacaacgttgacgacgccaatatcattgatc 145  Q
    |||  |||||||| ||||||||  |||||||||    
T  13152700 tctgtaacgttgatgacgccaaagtcattgatc 13152668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 45193440 - 45193512
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattg 142  Q
    ||||||| |||||| |||||| || |||| ||||||||   ||||| |||||||||||||||||| |||||||    
T  45193440 aatatgactatatttaagtctccaaaatactcatgtctccggatctgcaacgttgacgacgccaaaatcattg 45193512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 4882122 - 4882185
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||| ||| |||||||| || || |||||||||| || |||||| |||||||||||    
T  4882122 aacaaactcacagcatccatgttaatagcataaaacagcaaagtacatatgcctacaaatatga 4882185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 14265659 - 14265596
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| || || |||||||||| | | ||||| |||||||||||    
T  14265659 aacaaactcacaacatccatgttaatagcataaaacagcaaagtgtctatgcctacaaatatga 14265596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 15575868 - 15575793
Alignment:
Q  11 caaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaa 86  Q
    |||||||||||||||||| | |||||| |  || ||||| ||||||| |||||  ||||||||| |||||||||||    
T  15575868 caaacaaactcacaacattcgtgttaataacataaaacaacaaaatacatatgtctacaaatataattatattcaa 15575793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 33177352 - 33177483
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| ||||||||  | || |||| ||||| || | | || |||| |||||| ||||||||||||| || |||| ||||||||   ||    
T  33177352 aacaaactcacaacatccatgttaattgcataaaacggcaaagtacaaaagcctacacatatgactatattcaagtctccataatactcatgtctccgga 33177451  T
Q  113 tctacaacgttgacgacgccaatatcattgat 144  Q
    | | ||| ||||||||| ||||  ||||||||    
T  33177452 tttgcaatgttgacgacaccaaagtcattgat 33177483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 44513756 - 44513887
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| |  || |||||||||| ||   | || |||| |||||| |||||| |||||| | |||||  |||||||   ||    
T  44513756 aacaaactcacaacatccatgttaataacataaaacagcaaagtactaaagcctacacatatgactatatttaagtctccggaatacccatgtctccgga 44513855  T
Q  113 tctacaacgttgacgacgccaatatcattgat 144  Q
    ||| ||||||||||||| ||||  ||||||||    
T  44513856 tctgcaacgttgacgactccaaagtcattgat 44513887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 34567041 - 34566971
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatatt 83  Q
    |||||||||||||||| |||||||| || || |||| ||||| || ||| || ||||||||||| ||||||    
T  34567041 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacataagcctacaaatatgactatatt 34566971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 42491200 - 42491110
Alignment:
Q  66 tacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgatctaatttgcact 156  Q
    ||||||||||| |||  |||||||| | ||||| |||||||||  ||||| |||| ||||||||| |||  |||||||||| || ||||||    
T  42491200 tacaaatatgactatcgtcaagtctccggaatactcatgtcttcggatctgcaacattgacgacgtcaacgtcattgatctgatctgcact 42491110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 2350982 - 2350861
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||| ||||| || | | || ||||||||||| |||||| || ||| | |||||   ||| |||  ||    
T  2350982 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacaaaagcctacaaatatgactatattaaaatctccggaatagctatgccttcgga 2350883  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||| ||||||||    
T  2350882 tctgcaacgttgatgacgccaa 2350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 28677885 - 28678006
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||| | ||| ||  ||||| ||||||||||| |||||| | ||||   ||||| ||||||||    |    
T  28677885 aacaaactcacaacatccatgttaatagcataaaacggaaaagtacctatgcctacaaatatgactatatttatgtctctcgaatactcatgtctccata 28677984  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||| ||||    
T  28677985 tctgcaacgttgacgacaccaa 28678006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 40992652 - 40992527
Alignment:
Q  19 ctcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctaca 118  Q
    ||||||| || |||||||| ||||| ||||  |||| || | |||| |||| ||||||||||||| || | | | ||||||||||||||   ||||| ||    
T  40992652 ctcacaatatccatgttaatagtataaaacgacaaagtacaaatgcctacacatatgattatatttaaatatccggaatattcatgtctccggatctgca 40992553  T
Q  119 acgttgacgacgccaatatcattgat 144  Q
    |||| || ||||||||  ||||||||    
T  40992552 acgtggatgacgccaaagtcattgat 40992527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 13999275 - 13999227
Alignment:
Q  59 atatgcttacaaatatgattatattcaagtcttcagaatattcatgtct 107  Q
    |||||| ||||||||||| ||||||||||||| || |||| ||||||||    
T  13999275 atatgcctacaaatatgactatattcaagtctccataatactcatgtct 13999227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 15391064 - 15391128
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||||| |||| | ||||| ||||||||   ||||| ||||||||||||||||||    
T  15391064 aatatgactatattcatgtctccggaatactcatgtctccagatctgcaacgttgacgacgccaa 15391128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 44517457 - 44517393
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||||| |||| | ||||| ||||||||   ||||| ||||||||||||||||||    
T  44517457 aatatgactatattcatgtctccggaatactcatgtctccggatctgcaacgttgacgacgccaa 44517393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 51418285 - 51418229
Alignment:
Q  78 tatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||||||||| ||||||| |  |||||   ||||||||||||||||||||||||    
T  51418285 tatattcaagtctccagaatacttctgtctccggatctacaacgttgacgacgccaa 51418229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 35450 - 35329
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||||| ||| || |||||| || ||||||||  |||||||||||| | ||||| |||||| |   ||    
T  35450 aacaaactcacaacatccatgttaatagcataaaacagtaaagtacatatgcctataaatatgacaatattcaagtctccggaatactcatgtatccgga 35351  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||||||||    
T  35350 tctgcaacgttgacgacgccaa 35329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 13575955 - 13576040
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    ||||||| |||||||||||||||| |||||||| || || ||||| |||| |||||||||||| ||||| || |||||||||||||    
T  13575955 aatttgcgaacaaactcacaacatccatgttaatagcataaaacaacaaagtatatatgcttaaaaatacgactatattcaagtct 13576040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 32778718 - 32778858
Alignment:
Q  5 aatttgcaaacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatg 104  Q
    ||||||| |||||||||||||||  ||| |||| || || |||| ||||| ||  ||||  ||||||||||| ||||||||||||| ||||||| |||||    
T  32778718 aatttgcgaacaaactcacaacaaccatattaatagcataaaacggcaaagtacctatggctacaaatatgactatattcaagtctccagaatactcatg 32778817  T
Q  105 tcttatgatctacaacgttgacgacgccaatatcattgatc 145  Q
    |||   ||||| ||| ||||||||||| ||  |||||||||    
T  32778818 tctccagatctgcaaagttgacgacgcaaaagtcattgatc 32778858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 10338585 - 10338706
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||||||| |||||||| || || |||| ||||| ||  ||||| ||||||||||| ||||||   |||| | ||||| ||||||||   ||    
T  10338585 aacaaactcacaacatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgactatatttttgtctccggaatactcatgtctccgga 10338684  T
Q  113 tctacaacgttgacgacgccaa 134  Q
    ||| ||||||||||||||||||    
T  10338685 tctgcaacgttgacgacgccaa 10338706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 33526698 - 33526630
Alignment:
Q  61 atgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgac 129  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||| |  ||||||||||||| |||||    
T  33526698 atgcatacaaatatgattatattcaagtctccagaatactcatgtcattggatctacaacgttaacgac 33526630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 20993164 - 20993075
Alignment:
Q  16 aaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgt 105  Q
    |||||||||| || |||||||| ||||| ||| | || | || |||||| ||||||||||||||||||||||| ||| |||||| |||||    
T  20993164 aaactcacaatatccatgttaatagtataaaataacagagtacatatgcatacaaatatgattatattcaagtattcggaatatccatgt 20993075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 6219918 - 6219996
Alignment:
Q  66 tacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    ||||||||||| ||||||||||| | || |||| |||||| ||  ||||| ||||||||| |||||||| |||||||||    
T  6219918 tacaaatatgactatattcaagtatacaaaatactcatgttttcggatctgcaacgttgaagacgccaaaatcattgat 6219996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 10148311 - 10148193
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| |||||||| || || ||||  |||| ||  ||||| ||||||||||| |||||| |||||| |  |||| ||||||||   ||    
T  10148311 aacaaactcacatcatccatgttaatagcataaaacgacaaagtacttatgcctacaaatatgactatatttaagtctccgaaatactcatgtctccgga 10148212  T
Q  113 tctacaacgttgacgacgc 131  Q
    ||| |||||||||||||||    
T  10148211 tctgcaacgttgacgacgc 10148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 13864661 - 13864627
Alignment:
Q  71 atatgattatattcaagtcttcagaatattcatgt 105  Q
    |||||||||||||||||||||||||||||||||||    
T  13864661 atatgattatattcaagtcttcagaatattcatgt 13864627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 19720318 - 19720258
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacg 130  Q
    ||||||| ||||||||||||| | ||||| |||||||||  ||||| ||||||||||||||    
T  19720318 aatatgactatattcaagtctccggaatactcatgtcttcggatctgcaacgttgacgacg 19720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 40490287 - 40490350
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| ||||| |||| ||||||||  ||||| || ||||||||    
T  40490287 aacaaactcacaacatccatgttaatagtataaaacggcaaaatacctatgcctataaatatga 40490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 22787865 - 22787799
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgatta 79  Q
    |||||||||||| ||| |||||||| || || |||||||||| || |||||| |||||||| |||||    
T  22787865 aacaaactcacagcatccatgttaatagcataaaacagcaaagtagatatgcctacaaatacgatta 22787799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 27534166 - 27534236
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatatt 83  Q
    |||||||||||||||| |||||||| || || |||| ||||| || ||| || ||||||||||| ||||||    
T  27534166 aacaaactcacaacattcatgttaatagcataaaacggcaaagtacataagcctacaaatatgactatatt 27534236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 4928288 - 4928211
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtct 90  Q
    ||||||||||| |||| || ||||| ||||| ||||| | |||||  ||||| | ||||||||| |||||||||||||    
T  4928288 aacaaactcacgacatccaagttaatagtataaaacaacgaaatagttatgcctgcaaatatgactatattcaagtct 4928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 9270376 - 9270287
Alignment:
Q  18 actcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtct 107  Q
    ||||||||||| ||||||||||| || |||  ||||| || | |||| |||| |||||| |||||| || |||||||||||  |||||||    
T  9270376 actcacaacatccatgttaacagcataaaatggcaaagtacaaatgcctacacatatgactatatttaaatcttcagaataaccatgtct 9270287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 13977710 - 13977653
Alignment:
Q  71 atatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacga 128  Q
    |||||||||||||||||||| ||||||| |||| |||   ||||| ||||||||||||    
T  13977710 atatgattatattcaagtctccagaatactcatatctccggatctgcaacgttgacga 13977653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 38545949 - 38546038
Alignment:
Q  45 aaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    |||| ||||| ||| ||||| ||| || |||| ||||||||||||| | ||||| | ||||||   ||||| ||||||||||||||||||    
T  38545949 aaacggcaaagtatctatgcctactaacatgactatattcaagtctccggaatacttatgtctccggatctgcaacgttgacgacgccaa 38546038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 7579675 - 7579739
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||||||| | ||||| ||||||||   ||||| |||||||| |||||||||    
T  7579675 aatatgactatattcaagtctccggaatactcatgtctctggatctgcaacgttggcgacgccaa 7579739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 11162192 - 11162128
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||||||||||||||||| | ||||| |||| | |   ||||| ||||||||||||||||||    
T  11162192 aatatgattatattcaagtctccggaatactcatatttccggatctgcaacgttgacgacgccaa 11162128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 23971003 - 23971063
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacg 130  Q
    ||||||| ||||||||||||| | ||||| |||||||||  ||| | ||||||||||||||    
T  23971003 aatatgactatattcaagtctccggaatactcatgtctttggatttgcaacgttgacgacg 23971063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 30026702 - 30026766
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| ||||||||||||| | ||||||||||||||   ||||| ||||||||| || |||||    
T  30026702 aatatgactatattcaagtctccggaatattcatgtctccggatctgcaacgttgaagatgccaa 30026766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 41431354 - 41431478
Alignment:
Q  17 aactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatcta 116  Q
    ||||||||||||  || |||| ||||| |||   |||||||||||  ||||  ||||||| |||||| || ||| || ||||||||||||||  ||| ||    
T  41431354 aactcacaacatctatattaatagtataaaatgacaaaatatataaacttatgaatatgactatatttaattctccacaatattcatgtcttcagattta 41431453  T
Q  117 caacgttgacgacgccaatatcatt 141  Q
    || ||||||| | | ||||||||||    
T  41431454 catcgttgacaatgtcaatatcatt 41431478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 42261245 - 42261177
Alignment:
Q  60 tatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacga 128  Q
    |||||||||||||||||||||||||||| | ||| | || |||||| ||  ||||| ||| ||||||||    
T  42261245 tatgcttacaaatatgattatattcaagccatcaaagtactcatgttttcggatctgcaaagttgacga 42261177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 404547 - 404592
Alignment:
Q  59 atatgcttacaaatatgattatattcaagtcttcagaatattcatg 104  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||    
T  404547 atatgcttacaaatatgattatattcaagtcttcaaaatactcatg 404592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 2254 - 2329
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgatc 145  Q
    ||||||| ||||||||||||| ||||||| ||||||||   ||||| |||| |||||||||||||  |||||||||    
T  2254 aatatgactatattcaagtctccagaatactcatgtctccggatctgcaacattgacgacgccaaagtcattgatc 2329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 3813 - 3876
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatga 76  Q
    |||||||||||||||| |||||||| || || |||| ||||| ||||||||| |||||||||||    
T  3813 aacaaactcacaacatccatgttaatagcataaaacggcaaagtatatatgcctacaaatatga 3876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 21293 - 21242
Alignment:
Q  56 tatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtct 107  Q
    |||||||||||| |||||||| ||||||||||||| ||||||| ||||||||    
T  21293 tatatatgcttaaaaatatgactatattcaagtctccagaatactcatgtct 21242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 25269 - 25395
Alignment:
Q  16 aaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatgatct 115  Q
    ||||||||||||| |||||||| || || |||  ||||| || ||| || ||||||||||| |||||| || ||| | |||||  |||| |||  |||||    
T  25269 aaactcacaacatccatgttaatagcataaaatggcaaagtacataggcctacaaatatgactatattaaaatctccggaatagccatgccttcggatct 25368  T
Q  116 acaacgttgacgacgccaatatcattg 142  Q
     ||||||||| |||||||| |||||||    
T  25369 gcaacgttgatgacgccaaaatcattg 25395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 961 - 1026
Alignment:
Q  79 atattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaatatcattgat 144  Q
    |||||||||||||||||||| ||||||||   ||||| |||| | |||||||| ||| ||||||||    
T  961 atattcaagtcttcagaatactcatgtctccggatctgcaacatggacgacgctaatgtcattgat 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0999 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 2064 - 1932
Alignment:
Q  13 aacaaactcacaacatgcatgttaacagtattaaacagcaaaatatatatgcttacaaatatgattatattcaagtcttcagaatattcatgtcttatga 112  Q
    |||||||||||| ||| ||||| || || || ||||  |||| || |||||| |||||||| || |||| ||| |||| | ||||| | ||||||   ||    
T  2064 aacaaactcacatcatccatgtcaatagcataaaacgacaaagtacatatgcctacaaatacgactataatcatgtctccggaatacttatgtctctcga 1965  T
Q  113 tctacaacgttgacgacgccaatatcattgatc 145  Q
    ||| ||||||||| ||||||||  |||||||||    
T  1964 tctgcaacgttgatgacgccaaagtcattgatc 1932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 74473 - 74409
Alignment:
Q  70 aatatgattatattcaagtcttcagaatattcatgtcttatgatctacaacgttgacgacgccaa 134  Q
    ||||||| |||||||| |||||| ||||| ||||||||   ||||| |||||||||||| |||||    
T  74473 aatatgactatattcatgtcttcggaatactcatgtctccggatctgcaacgttgacgatgccaa 74409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University