View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1297_low_115 (Length: 253)

Name: NF1297_low_115
Description: NF1297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1297_low_115
NF1297_low_115
[»] chr5 (28 HSPs)
chr5 (83-253)||(5140888-5141058)
chr5 (83-253)||(5204837-5205008)
chr5 (83-253)||(40756761-40756932)
chr5 (83-253)||(4429436-4429606)
chr5 (85-253)||(39939285-39939453)
chr5 (87-253)||(23690721-23690886)
chr5 (99-199)||(27876210-27876310)
chr5 (90-253)||(23408276-23408438)
chr5 (92-220)||(13544343-13544471)
chr5 (164-247)||(10118471-10118553)
chr5 (87-225)||(4039719-4039857)
chr5 (167-225)||(40524329-40524387)
chr5 (83-115)||(43393113-43393145)
chr5 (164-247)||(2011285-2011367)
chr5 (164-247)||(6335488-6335570)
chr5 (164-247)||(9499485-9499567)
chr5 (164-247)||(12336311-12336393)
chr5 (164-247)||(29666047-29666129)
chr5 (167-225)||(2021771-2021829)
chr5 (167-225)||(5512930-5512988)
chr5 (167-225)||(7080211-7080269)
chr5 (90-152)||(19189130-19189192)
chr5 (167-225)||(34901905-34901963)
chr5 (164-225)||(13956827-13956888)
chr5 (164-225)||(19238891-19238952)
chr5 (164-225)||(28204870-28204931)
chr5 (164-216)||(16602619-16602671)
chr5 (162-230)||(18002893-18002961)
[»] chr3 (31 HSPs)
chr3 (85-253)||(29698542-29698710)
chr3 (87-253)||(43903093-43903259)
chr3 (83-253)||(32122119-32122289)
chr3 (104-253)||(8353281-8353430)
chr3 (88-225)||(27102841-27102984)
chr3 (93-251)||(27525216-27525373)
chr3 (164-253)||(52776669-52776756)
chr3 (162-225)||(11510969-11511032)
chr3 (86-225)||(14998398-14998536)
chr3 (90-147)||(52776778-52776835)
chr3 (165-225)||(4393081-4393141)
chr3 (164-247)||(4521496-4521578)
chr3 (164-247)||(36790114-36790196)
chr3 (164-230)||(26001292-26001358)
chr3 (164-225)||(28146575-28146636)
chr3 (164-225)||(29384781-29384842)
chr3 (164-225)||(46936756-46936817)
chr3 (90-145)||(11511048-11511103)
chr3 (169-253)||(15298457-15298542)
chr3 (164-214)||(34914552-34914602)
chr3 (167-225)||(45633277-45633335)
chr3 (167-225)||(52058762-52058820)
chr3 (164-225)||(20199444-20199505)
chr3 (164-225)||(28146464-28146525)
chr3 (164-225)||(32720083-32720144)
chr3 (164-225)||(35375770-35375831)
chr3 (87-116)||(46936680-46936709)
chr3 (87-124)||(48795768-48795805)
chr3 (91-147)||(5532370-5532426)
chr3 (164-247)||(24397471-24397554)
chr3 (165-225)||(51996665-51996725)
[»] chr6 (23 HSPs)
chr6 (83-253)||(19473688-19473858)
chr6 (83-253)||(1705623-1705792)
chr6 (83-253)||(2994545-2994714)
chr6 (87-253)||(10965740-10965906)
chr6 (83-253)||(1371426-1371597)
chr6 (83-253)||(1379174-1379345)
chr6 (83-253)||(21181156-21181327)
chr6 (85-253)||(21293809-21293976)
chr6 (83-225)||(24248821-24248963)
chr6 (87-253)||(1339395-1339560)
chr6 (163-253)||(14507717-14507807)
chr6 (87-253)||(24159683-24159857)
chr6 (87-148)||(14506937-14506998)
chr6 (90-253)||(10888029-10888192)
chr6 (164-247)||(14872553-14872635)
chr6 (86-247)||(6974926-6975086)
chr6 (164-247)||(926638-926720)
chr6 (164-247)||(21998711-21998793)
chr6 (90-147)||(7344641-7344698)
chr6 (90-226)||(26315471-26315607)
chr6 (164-247)||(6295475-6295557)
chr6 (164-225)||(24081393-24081454)
chr6 (164-252)||(14715488-14715575)
[»] chr7 (35 HSPs)
chr7 (83-253)||(17833948-17834118)
chr7 (83-253)||(48460461-48460630)
chr7 (87-253)||(23182609-23182774)
chr7 (83-253)||(29689145-29689314)
chr7 (83-225)||(31760010-31760152)
chr7 (100-253)||(5215054-5215210)
chr7 (83-230)||(21919933-21920081)
chr7 (83-253)||(31743317-31743489)
chr7 (166-253)||(41769492-41769578)
chr7 (93-148)||(32670524-32670579)
chr7 (90-253)||(13806386-13806547)
chr7 (90-252)||(1343043-1343206)
chr7 (86-147)||(9682351-9682412)
chr7 (164-247)||(11640392-11640474)
chr7 (164-247)||(22639594-22639676)
chr7 (164-247)||(25411853-25411935)
chr7 (164-247)||(49079350-49079432)
chr7 (167-225)||(43958862-43958920)
chr7 (164-225)||(3228338-3228399)
chr7 (164-225)||(12395291-12395352)
chr7 (164-225)||(45701283-45701344)
chr7 (164-247)||(19345709-19345791)
chr7 (161-252)||(32823032-32823122)
chr7 (86-116)||(27800384-27800414)
chr7 (87-225)||(31311367-31311505)
chr7 (211-253)||(32670468-32670510)
chr7 (164-230)||(40856779-40856845)
chr7 (164-225)||(22904740-22904801)
chr7 (164-225)||(27427380-27427441)
chr7 (87-116)||(27569628-27569657)
chr7 (164-225)||(35859333-35859394)
chr7 (87-116)||(40379317-40379346)
chr7 (164-225)||(43541879-43541940)
chr7 (91-147)||(15715930-15715986)
chr7 (86-114)||(32822957-32822985)
[»] chr4 (41 HSPs)
chr4 (83-253)||(44957138-44957308)
chr4 (83-253)||(52405550-52405720)
chr4 (83-253)||(4490891-4491060)
chr4 (87-253)||(31975570-31975736)
chr4 (83-251)||(40438857-40439024)
chr4 (87-253)||(19594952-19595118)
chr4 (83-253)||(39103757-39103928)
chr4 (83-253)||(12756019-12756189)
chr4 (86-253)||(39953805-39953970)
chr4 (83-253)||(19526741-19526910)
chr4 (104-253)||(34927322-34927471)
chr4 (83-225)||(53973704-53973846)
chr4 (87-209)||(31296782-31296904)
chr4 (83-209)||(49286873-49286998)
chr4 (85-230)||(15060576-15060721)
chr4 (109-253)||(34584402-34584546)
chr4 (90-253)||(52940504-52940667)
chr4 (83-251)||(4695324-4695490)
chr4 (83-199)||(595545-595661)
chr4 (90-221)||(9579917-9580048)
chr4 (90-221)||(9585612-9585743)
chr4 (205-253)||(43349286-43349334)
chr4 (86-147)||(13548729-13548790)
chr4 (165-253)||(18052156-18052244)
chr4 (164-225)||(19627697-19627758)
chr4 (164-247)||(1792054-1792136)
chr4 (164-247)||(6882760-6882842)
chr4 (164-247)||(17370503-17370585)
chr4 (164-247)||(48207175-48207257)
chr4 (164-230)||(27950498-27950564)
chr4 (87-147)||(16601631-16601691)
chr4 (165-225)||(25684342-25684402)
chr4 (83-115)||(46688119-46688151)
chr4 (164-199)||(15033526-15033561)
chr4 (85-124)||(39380747-39380786)
chr4 (92-147)||(52324292-52324347)
chr4 (164-247)||(52415070-52415152)
chr4 (167-225)||(21722274-21722332)
chr4 (167-225)||(22789830-22789888)
chr4 (164-225)||(30168346-30168407)
chr4 (91-147)||(582794-582850)
[»] chr1 (33 HSPs)
chr1 (83-253)||(7435530-7435700)
chr1 (84-253)||(38207751-38207919)
chr1 (89-253)||(24594082-24594245)
chr1 (85-253)||(40054607-40054774)
chr1 (83-253)||(44808421-44808590)
chr1 (87-253)||(45650028-45650194)
chr1 (104-253)||(43916566-43916714)
chr1 (83-253)||(51991548-51991717)
chr1 (163-247)||(1845298-1845381)
chr1 (83-253)||(24451755-24451924)
chr1 (161-253)||(51005011-51005102)
chr1 (162-253)||(43146522-43146614)
chr1 (87-147)||(47601668-47601728)
chr1 (162-225)||(44978985-44979048)
chr1 (164-247)||(13216323-13216405)
chr1 (164-247)||(43536974-43537056)
chr1 (167-225)||(4155881-4155939)
chr1 (92-225)||(14077355-14077488)
chr1 (90-147)||(44978893-44978950)
chr1 (164-225)||(49982702-49982763)
chr1 (164-224)||(26424088-26424148)
chr1 (83-147)||(26424166-26424230)
chr1 (107-147)||(51161164-51161204)
chr1 (164-247)||(39084941-39085023)
chr1 (164-247)||(39871613-39871694)
chr1 (164-247)||(41568542-41568624)
chr1 (164-230)||(17644627-17644693)
chr1 (167-225)||(29877950-29878008)
chr1 (164-225)||(12227220-12227281)
chr1 (164-225)||(33082086-33082147)
chr1 (164-225)||(35912880-35912941)
chr1 (164-225)||(51161221-51161282)
chr1 (161-225)||(10179122-10179186)
[»] chr2 (34 HSPs)
chr2 (83-253)||(15362689-15362858)
chr2 (83-253)||(41555645-41555814)
chr2 (83-251)||(17809251-17809418)
chr2 (83-253)||(713569-713739)
chr2 (83-253)||(38600030-38600200)
chr2 (83-253)||(39089836-39090008)
chr2 (112-253)||(34852555-34852697)
chr2 (83-225)||(22622664-22622806)
chr2 (100-253)||(40810452-40810605)
chr2 (90-253)||(15426244-15426405)
chr2 (85-189)||(15334337-15334441)
chr2 (197-253)||(34188685-34188741)
chr2 (83-135)||(4786379-4786431)
chr2 (87-205)||(2859605-2859723)
chr2 (86-230)||(45690743-45690886)
chr2 (90-253)||(8362624-8362788)
chr2 (164-247)||(4108404-4108486)
chr2 (164-225)||(41184584-41184645)
chr2 (162-253)||(12071251-12071341)
chr2 (164-247)||(36428734-36428816)
chr2 (167-225)||(38030805-38030863)
chr2 (164-225)||(25332876-25332937)
chr2 (163-252)||(25740083-25740171)
chr2 (164-225)||(28318289-28318350)
chr2 (87-252)||(37989052-37989215)
chr2 (85-225)||(40287952-40288091)
chr2 (164-247)||(15176440-15176522)
chr2 (164-247)||(16718733-16718815)
chr2 (164-247)||(33429230-33429312)
chr2 (164-247)||(43359201-43359283)
chr2 (164-246)||(8504254-8504335)
chr2 (164-225)||(5615478-5615539)
chr2 (86-147)||(11088236-11088297)
chr2 (164-252)||(2283385-2283472)
[»] chr8 (33 HSPs)
chr8 (83-253)||(29107773-29107942)
chr8 (85-253)||(7885896-7886063)
chr8 (87-253)||(44578874-44579040)
chr8 (83-253)||(31893553-31893722)
chr8 (90-253)||(27970036-27970198)
chr8 (96-225)||(9712656-9712785)
chr8 (129-225)||(38764987-38765083)
chr8 (83-140)||(15259318-15259375)
chr8 (90-253)||(34047636-34047799)
chr8 (164-225)||(40824561-40824622)
chr8 (164-225)||(42165151-42165212)
chr8 (164-231)||(2731887-2731954)
chr8 (164-247)||(34520668-34520750)
chr8 (167-225)||(9509105-9509163)
chr8 (167-225)||(32887914-32887972)
chr8 (164-230)||(40972308-40972374)
chr8 (164-225)||(2880177-2880238)
chr8 (164-225)||(5982434-5982495)
chr8 (164-225)||(29604262-29604323)
chr8 (164-225)||(32071488-32071549)
chr8 (164-225)||(36569897-36569958)
chr8 (164-247)||(5273156-5273238)
chr8 (164-247)||(17069460-17069542)
chr8 (164-247)||(17578731-17578813)
chr8 (84-147)||(17838661-17838724)
chr8 (164-247)||(41674581-41674663)
chr8 (164-247)||(43331841-43331923)
chr8 (164-247)||(44309663-44309745)
chr8 (164-247)||(44637147-44637229)
chr8 (86-116)||(12801127-12801157)
chr8 (164-230)||(12801204-12801270)
chr8 (167-225)||(23870516-23870574)
chr8 (91-147)||(40267503-40267559)
[»] scaffold0131 (1 HSPs)
scaffold0131 (87-230)||(10690-10833)
[»] scaffold1844 (1 HSPs)
scaffold1844 (87-253)||(1137-1302)
[»] scaffold0009 (1 HSPs)
scaffold0009 (83-253)||(214157-214326)
[»] scaffold0045 (1 HSPs)
scaffold0045 (89-253)||(38003-38168)
[»] scaffold0721 (1 HSPs)
scaffold0721 (85-230)||(6828-6975)
[»] scaffold0072 (1 HSPs)
scaffold0072 (87-147)||(47900-47960)
[»] scaffold0648 (1 HSPs)
scaffold0648 (164-247)||(1371-1453)
[»] scaffold0271 (1 HSPs)
scaffold0271 (164-247)||(15751-15833)
[»] scaffold0841 (1 HSPs)
scaffold0841 (162-225)||(3302-3365)


Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 5141058 - 5140888
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||    
T  5141058 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaataaaaagaattgttttctatcattaacaatt 5140959  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  5140958 acaataattagatcttagttaccgaaagtgtcgacaaaataaaattttacactttttgaatttttgttaca 5140888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 5205008 - 5204837
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||| ||||||||    
T  5205008 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcaataacaatt 5204909  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacg-aaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||    
T  5204908 acaataattagatcttagttaccgaaagtgtcgacgaaaataaaattttatattttttgaatttttgttaca 5204837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 40756932 - 40756761
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||| ||||||||    
T  40756932 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcaataacaatt 40756833  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacg-aaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||    
T  40756832 acaataattagatcttagttaccgaaagtgtcgacgaaaataaaattttatattttttgaatttttgttaca 40756761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 4429436 - 4429606
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||        ||||||||||| |||||| |||    
T  4429436 actcaaaaatttgagtgtaccggtataccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctattattaacgatt 4429535  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  4429536 tcaataattagatcttagttaccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 4429606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 85 - 253
Target Start/End: Complemental strand, 39939453 - 39939285
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||  |||        ||||||||||||||||||||||||    
T  39939453 tcaaaaatttgagtgtaccggtacaccaaattatcaaatttatattgaaacgagttgttcttttgaagaaaaagaattgttttctatcattaacaattac 39939354  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  39939353 aataattagatcttagttaccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 39939285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 23690886 - 23690721
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |||        || |||||||||||||||||||||||    
T  23690886 aaaaatttgagtgtaccggtacaccaaattatcaaattcatattaaaacgagttgttttatcgaagaaaaagattttttttctatcattaacaattacaa 23690787  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||| ||||||||||||||||||||  |||||| |||||||||||||||||||    
T  23690786 taattagatcttagttactgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 23690721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 27876310 - 27876210
Alignment:
Q  99 gtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataattagatctt 198  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||        ||||||||||||||||||||||||||||||||||||||    
T  27876310 gtaccggtacaccaaatcatcaaattcatattgaaacgagttattttttcgaagaaaaagaattgttttctatcattaacaattacaataattagatctt 27876211  T
Q  199 a 199  Q
    |    
T  27876210 a 27876210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 253
Target Start/End: Original strand, 23408276 - 23408438
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataa 189  Q
    |||||||||||||||||||||||||| || ||||| |||   ||||||||||||||||  |||         |||||||||| ||| |||||||||||||    
T  23408276 aatttgagtgtaccggtacaccaaattattaaattaataagtaaacgagttgtttttttgaagaaaaaaatctgttttctattattgacaattacaataa 23408375  T
Q  190 ttagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||| ||| || ||||| |||| ||||||||||||||  |||||  |||||||| ||||||||||    
T  23408376 ttaaatcgtatttaccaaaagcgtcgacgaaataaa-atttactttttttgaaattttgttaca 23408438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 13544471 - 13544343
Alignment:
Q  92 tttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataatt 191  Q
    |||||||| |||||||||||||||| | || || ||||||||||||||||||||||  |||         | |||||||||||||||||||||||||  |    
T  13544471 tttgagtgcaccggtacaccaaatcgttaatttgatattgaaacgagttgtttttttgaagaaaaataaattttttctatcattaacaattacaatagct 13544372  T
Q  192 agatcttagttaccgaaagtgtcgacgaa 220  Q
    |||||||| ||| | ||||||||||||||    
T  13544371 agatcttatttaacaaaagtgtcgacgaa 13544343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 10118553 - 10118471
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  10118553 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 10118471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 4039857 - 4039719
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||||||||||||||||| |||||  || | |||  |||| ||||||  |||        || |||||||||||| ||||||| ||    
T  4039857 aaaaatttgagtgtaccggtacaccaaatcattaaattattaataaaataagtttttttttttaagaaaaagaattattttctatcattgacaattataa 4039758  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||  |||||| ||| | ||||  |||||||||||||    
T  4039757 taattcaatcttatttatcaaaagcttcgacgaaataaa 4039719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 40524387 - 40524329
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  40524387 tctatcatttacaattataaaaattaaatcttatttaccaaaagtgtcgacgaaataaa 40524329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 43393145 - 43393113
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaat 115  Q
    |||||||||||||||||||||||||||||||||    
T  43393145 actcaaaaatttgagtgtaccggtacaccaaat 43393113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 2011367 - 2011285
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||| | |||| ||||| ||||||||  |||||  |||||||||||||    
T  2011367 ttttctatcattgacaattataataattaaatcttatttatcaaaagcgtcgatgaaataaa-atttactttttttgaattttt 2011285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 6335488 - 6335570
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| |||| || |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  6335488 ttttctatcattgacaactataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 6335570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 9499485 - 9499567
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||| | |||| ||||| ||||||||  |||||  |||||||||||||    
T  9499485 ttttctatcattgacaattataataattaaatcttatttatcaaaagcgtcgatgaaataaa-atttactttttttgaattttt 9499567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 12336311 - 12336393
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| |||| || |||||||| |||||| ||| | |||| ||||| ||||||||  |||||| |||||||||||||    
T  12336311 ttttctatcattgacaactataataattaaatcttatttagcaaaagcgtcgatgaaataaa-atttacattttttgaattttt 12336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 29666129 - 29666047
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||| | |||| ||||| ||||||||  |||||  |||||||||||||    
T  29666129 ttttctatcattgacaattataataattaaatcttatttatcaaaagcgtcgatgaaataaa-atttactttttttgaattttt 29666047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 2021771 - 2021829
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  2021771 tctatcattgacaattataaaaattaaatcttatttaccaaaagcgtcgacgaaataaa 2021829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 5512988 - 5512930
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  5512988 tctatcatttacaattataaaaattaaattttatttaccaaaagtgtcgacgaaataaa 5512930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 7080211 - 7080269
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  7080211 tctatcatttacaattataaaaattaaatcttatttaccaaaagcgtcgacgaaataaa 7080269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 19189130 - 19189192
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaag 152  Q
    ||||||||||||||||||||| |||| || ||||| ||| | |||||| ||||||||| ||||    
T  19189130 aatttgagtgtaccggtacactaaattattaaattaataattaaacgaattgtttttttaaag 19189192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 34901963 - 34901905
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  34901963 tctatcatttacaattataaaaattaaatcttatttaccaaaagcgtcgacgaaataaa 34901905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 13956888 - 13956827
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||| ||| ||| |||| |||||| ||||| |||||||||| ||||||||    
T  13956888 ttttctatcattgacagttataattattaaatcttatttaccaaaagtgtcgatgaaataaa 13956827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 19238891 - 19238952
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| || |||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  19238891 ttttctatcattgactattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 19238952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 28204870 - 28204931
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||| ||||||||||||||| |||||||| |||||| ||||| |||   |||||||||||||    
T  28204870 ttttttatcattaacaattataataattaaatcttatttaccaaaaagttcgacgaaataaa 28204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 16602671 - 16602619
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcga 216  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| |||||    
T  16602671 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcga 16602619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 18002961 - 18002893
Alignment:
Q  162 tgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||||||||| ||| ||||||| |||||||| ||| || ||| | |||| ||||||||||||| |||||    
T  18002961 tgttttctattattgacaattataataattaaatcatatttatcaaaagcgtcgacgaaataatttttt 18002893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 7e-67; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 85 - 253
Target Start/End: Complemental strand, 29698710 - 29698542
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||    
T  29698710 tcaaaaatttgagtgtaccggtacaccaaatcatctaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaattac 29698611  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  29698610 aataattagatcttagttaccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 29698542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 43903093 - 43903259
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||| ||||||||    
T  43903093 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaaaaattacaa 43903192  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  43903193 taattagatcttagttaccgaaagtgtcaacgaaataaaattttacactttttgaatttttgttaca 43903259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 32122289 - 32122119
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||        ||||||||||||||||||||||    
T  32122289 actcaaaaatttaagtgtaccggtacactaaatcatcaaatttatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaatt 32122190  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||| | |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  32122189 acaataattagatcttagttatcaaaagtgtcaacgaaataaaattttacattttttgaatttttgttaca 32122119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 8353430 - 8353281
Alignment:
Q  104 ggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataattagatcttagtta 203  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||    
T  8353430 ggtacacaaaatcattaaatttatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaattacaataattagatcttagtta 8353331  T
Q  204 ccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
     | ||| | | ||||||||||| ||||| | ||||||||||||| |||||    
T  8353330 tcaaaaatattgacgaaataaaattttatattttttgaatttttattaca 8353281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 27102984 - 27102841
Alignment:
Q  88 aaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttca-------aagnnnnnnnnttgttttctatcattaacaa 180  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||         |||        ||||||||||||||||||||    
T  27102984 aaaatttgagtgtaccggtacaccaa-tcatcaaattaatattgaaacgagttgttttttttttttttgaagaaaaagaattgttttctatcattaacaa 27102886  T
Q  181 ttacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||    
T  27102885 ttacaataattagatcttatttatcaaaagtgtcgacgaaataaa 27102841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 27525216 - 27525373
Alignment:
Q  93 ttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataatta 192  Q
    ||||||| |||| ||||||||||||| || || ||||||||||||||||||||||  |||        ||||||||||||||||||||||||||||  ||    
T  27525216 ttgagtgcaccgatacaccaaatcattaatttaatattgaaacgagttgtttttttgaagaaaaataattgttttctatcattaacaattacaatagcta 27525315  T
Q  193 gatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgtta 251  Q
    ||||||| ||| | |||||||||||||||||||  ||||   |||||||||||||||||    
T  27525316 gatcttatttaacaaaagtgtcgacgaaataaa-atttattttttttgaatttttgtta 27525373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 52776756 - 52776669
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||| |||||||||||||||| ||| || ||||| |||| ||||||||||||||  |||||  |||||||||||||||||||    
T  52776756 ttttctatcattgacaattacaataattaaatcgtatttaccaaaagcgtcgacgaaataaa-atttac-ttttttgaatttttgttaca 52776669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 11511032 - 11510969
Alignment:
Q  162 tgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||||| |||||||||||||||| |||||| ||||| |||| ||||||||| ||||    
T  11511032 tgttttctatcattgacaattacaataattaaatcttatttaccaaaagcgtcgacgaattaaa 11510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 14998536 - 14998398
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatc-atcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    ||||||||||||||||||||||||||||||| ||  |||| ||  | ||| |||||||| |||  |||        || |||| |||||||||||||||     
T  14998536 caaaaatttgagtgtaccggtacaccaaatcgat--aattaatgattaaatgagttgttgtttttaagaaaatgaattattttttatcattaacaattat 14998439  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||| |||||| ||||| ||||| |||||||||||||    
T  14998438 aataattaaatcttatttaccaaaagtttcgacgaaataaa 14998398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 52776835 - 52776778
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||||||||||||||||||||||||| || ||||| ||| | ||||||||||||||||    
T  52776835 aatttgagtgtaccggtacaccaaattattaaattaataattaaacgagttgtttttt 52776778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 4393081 - 4393141
Alignment:
Q  165 tttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||| |||||||||||||||| ||| || ||||| |||| ||||||||||||||    
T  4393081 tttctatcattgacaattacaataattaaatcgtatttaccaaaagcgtcgacgaaataaa 4393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 4521578 - 4521496
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  4521578 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 4521496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 36790196 - 36790114
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  36790196 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 36790114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 26001292 - 26001358
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||| | |||||||||||||    
T  26001292 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtccatgaaataaattttt 26001358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 28146636 - 28146575
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  28146636 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 28146575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 29384781 - 29384842
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  29384781 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 29384842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 46936756 - 46936817
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||| ||||||||||||||| |||||||| |||||| ||||| ||||  |||||||||||||    
T  46936756 ttttttatcattaacaattataataattaaatcttatttaccaaaaggttcgacgaaataaa 46936817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 11511103 - 11511048
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttt 145  Q
    ||||||||| |||||||||||||||| || ||||| ||| | ||||||||||||||    
T  11511103 aatttgagtttaccggtacaccaaattattaaattaataattaaacgagttgtttt 11511048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 15298542 - 15298457
Alignment:
Q  169 tatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacac--tttttgaatttttgttaca 253  Q
    ||||||| |||||||||||||||| ||| || ||||| |||  ||||||||||||||  ||||| |  |||||||||||||||||||    
T  15298542 tatcattgacaattacaataattaaatcgtatttaccaaaaacgtcgacgaaataaa-atttactctttttttgaatttttgttaca 15298457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 34914602 - 34914552
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtc 214  Q
    |||||||||||| ||||||| ||||| ||||||||  ||||||||||||||    
T  34914602 ttttctatcatttacaattataataactagatcttgtttaccgaaagtgtc 34914552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 45633277 - 45633335
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  45633277 tctatcatttacaattataaaaattaaatcttatttaccaaaagcgtcgacgaaataaa 45633335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 52058820 - 52058762
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||| | |||||||||||||||||||    
T  52058820 tctatcatttacaattataaaaattaaatcttatttatcaaaagtgtcgacgaaataaa 52058762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 20199444 - 20199505
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||| | |||| ||||| ||||||||    
T  20199444 ttttctatcattgacaattataataattaaatcttatttatcaaaagcgtcgatgaaataaa 20199505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 28146525 - 28146464
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| |||||  ||| ||||| ||||||||    
T  28146525 ttttctatcattgacaattataataattaaatcttatttaccacaagcgtcgatgaaataaa 28146464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 32720083 - 32720144
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||||||||||||  ||||||| || ||| ||||| ||||  |||||||||||||    
T  32720083 ttttctatcattaacaattaagataattaaattttatttaccaaaagcttcgacgaaataaa 32720144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 35375831 - 35375770
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||| ||||||||||||||| |||||||| |||||| || || |||||||| | ||||||||    
T  35375831 ttttttatcattaacaattataataattaaatcttattttccaaaagtgtcaatgaaataaa 35375770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 116
Target Start/End: Original strand, 46936680 - 46936709
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatc 116  Q
    ||||||||||||||||||||||||||||||    
T  46936680 aaaaatttgagtgtaccggtacaccaaatc 46936709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 48795805 - 48795768
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaatt 124  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  48795805 aaaaatttaagtgtaccggtacaccaaatcattaaatt 48795768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 5532426 - 5532370
Alignment:
Q  91 atttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    ||||||||||||||||||||||||| || ||||| ||||| ||  ||||| ||||||    
T  5532426 atttgagtgtaccggtacaccaaataattaaattaatatttaattgagttttttttt 5532370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 24397471 - 24397554
Alignment:
Q  164 ttttctatcattaacaattacaataattagatc-ttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| ||| ||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  24397471 ttttctatcattgacaattataataattaaatctttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 24397554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 51996725 - 51996665
Alignment:
Q  165 tttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||| ||||||| |||||||| || ||| ||||| |||| ||||| ||||||||    
T  51996725 tttctatcattgacaattataataattaaattttatttaccaaaagcgtcgatgaaataaa 51996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 19473688 - 19473858
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        || ||||||||||||| |||||    
T  19473688 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaatttttttctatcattaccaatt 19473787  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  19473788 acaataattagatcttagttaccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 19473858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 1705623 - 1705792
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||    
T  1705623 actcaaaaatttgagtgtatcggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaaaaattgttttctatcattaacaatt 1705722  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  1705723 acaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 1705792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 2994714 - 2994545
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||| |||||||||||||    
T  2994714 actccaaattttgagtgtatcggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagaaaaagaattgttttccatcattaacaatt 2994615  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||    
T  2994614 acaataattagatcttagttaccgaaagtgtctacgaaataaa-atttacattttttgaatttttgttaca 2994545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 10965740 - 10965906
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||        ||||||||||||||||||||||||||    
T  10965740 aaaaatttgagtgtaccgatacaccaaatcatcaaattcatattgtaacgagttgttttttcgaagaaaaaaaattgttttctatcattaacaattacaa 10965839  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||||| ||||| |||||||||||||    
T  10965840 taattagatcttagttaccgaaaatgtcgatgaaataaaattttacattttttaaatttttgttaca 10965906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 1371426 - 1371597
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt-caaagnnnnnnnnttgttttctatcattaacaat 181  Q
    |||||||||||||||||| || || |||||||||||||||||| ||||||||||||||||||||| | |||        |||||||||||||||||||||    
T  1371426 actcaaaaatttgagtgtcccagtgcaccaaatcatcaaattcctattgaaacgagttgtttttttcgaagaaaaagaattgttttctatcattaacaat 1371525  T
Q  182 tacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||||||    
T  1371526 tacaataattagatcttagttaccgaaagtgtcaacgaaataaaattttacattttttgagtttttgttaca 1371597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 1379174 - 1379345
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt-caaagnnnnnnnnttgttttctatcattaacaat 181  Q
    |||||||||||||||||| || || |||||||||||||||||| ||||||||||||||||||||| | |||        |||||||||||||||||||||    
T  1379174 actcaaaaatttgagtgtcccagtgcaccaaatcatcaaattcctattgaaacgagttgtttttttcgaagaaaaagaattgttttctatcattaacaat 1379273  T
Q  182 tacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||||||    
T  1379274 tacaataattagatcttagttaccgaaagtgtcaacgaaataaaattttacattttttgagtttttgttaca 1379345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 21181156 - 21181327
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| |||        ||||||||||||||| ||||||    
T  21181156 actcaaaaatttgagtgtatcggtacaccaaatcatcaaatttatattgaaacaagttgttttttcgaagaaaaataattgttttctatcattgacaatt 21181255  T
Q  183 acaataattagatcttag-ttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||| ||||| |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  21181256 acaataattagatcttagtttaccaaaagtgtcaacgaaataaaattttacattttttgaatttttgttaca 21181327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 85 - 253
Target Start/End: Original strand, 21293809 - 21293976
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||| || |||||||||||  |||        ||||||||||||||||| ||||||    
T  21293809 tcaaaaatttgagtgtaccggtatactaaatcatcaaatttatattgatacaagttgtttttttgaagaaaaagaattgttttctatcattaataattac 21293908  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  21293909 aataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 21293976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 83 - 225
Target Start/End: Original strand, 24248821 - 24248963
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||        | ||||||||||||||||||||    
T  24248821 actcaaaaatttgagtgtaccggtacaccaaatcatcaaatttatattgaaacgagttgtttttttgaagaaaaagaatcgttttctatcattaacaatt 24248920  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  24248921 acaataattagatcttagttaccaaaagtgtcaacgaaataaa 24248963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 1339395 - 1339560
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||  |||        ||||||||||||||||||||||| ||    
T  1339395 aaaaatttgagtgtaccgatacaccaaatcatcaaattaatattgaaacgagttgttcttttgaagaaaaagaattgttttctatcattaacaattataa 1339494  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||| ||| | |||||||||||||||||||  |||||  |||||||||||||||||||    
T  1339495 taattagatcttatttatcaaaagtgtcgacgaaataaa-atttactttttttgaatttttgttaca 1339560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 14507717 - 14507807
Alignment:
Q  163 gttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  14507717 gttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 14507807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 24159857 - 24159683
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttca---------aagnnnnnnnnttgttttctatcattaa 177  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||           |||        |||||||||||||||||    
T  24159857 aaaaatttgagtgtactggtacaccaaatcatcacattaatattgaaacgagttgttttttttttttttttgaagaaaaataattgttttctatcattaa 24159758  T
Q  178 caattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||||  ||||   |||||||||||||||||||    
T  24159757 caattacaataattagatcttatttatcaaaagtgtcgacgaaataaa-atttattttttttgaatttttgttaca 24159683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 14506937 - 14506998
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttc 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14506937 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttc 14506998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 253
Target Start/End: Complemental strand, 10888192 - 10888029
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataa 189  Q
    ||||||||||||| |||||| ||||| || ||||| ||| |  |||||||||||||||  |||        ||||||||||||||| |||||||||||||    
T  10888192 aatttgagtgtactggtacatcaaattattaaattaataattgaacgagttgttttttagaagaaaaagaattgttttctatcatttacaattacaataa 10888093  T
Q  190 ttagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||| ||| || ||||| ||||  |||| |||||||| |||     |||||||||||||||||||    
T  10888092 ttaaatcgtatttaccaaaagcatcgatgaaataaaatttacttttttttgaatttttgttaca 10888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 14872635 - 14872553
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||||||||| ||||||||  |||||  |||||||||||||    
T  14872635 ttttctatcattgacaattataataattaaatcttatttaccaaaagtgtcgatgaaataaa-atttactttttttgaattttt 14872553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 247
Target Start/End: Complemental strand, 6975086 - 6974926
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattaca 185  Q
    ||||||||||||||| |||||| |||||||  | ||||| ||| | ||| ||||||||||||  |||        || |||||||||||| | ||||| |    
T  6975086 caaaaatttgagtgtgccggtataccaaattgttaaattaataattaaatgagttgtttttttgaagataaataattattttctatcatttataattata 6974987  T
Q  186 ataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    ||||||| || ||| ||| | ||||| ||||||||||||| ||||||  |||||||||||||    
T  6974986 ataattaaattttatttatcaaaagtttcgacgaaataaa-ttttactttttttgaattttt 6974926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 926638 - 926720
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  926638 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 926720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 21998711 - 21998793
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  21998711 ttttctatcattgacaattataataattaaatcttatttaccaaaagagtcgatgaaataaa-atttactttttttgaattttt 21998793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 7344698 - 7344641
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||||||||||||||||||||||||| || ||||  ||| | ||||||||||||||||    
T  7344698 aatttgagtgtaccggtacaccaaattattaaataaataattaaacgagttgtttttt 7344641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 226
Target Start/End: Original strand, 26315471 - 26315607
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttca-aagnnnnnnnnttgttttctatcattaacaattacaata 188  Q
    |||||||||||||||||||||||||| || ||||| ||  | ||||||||||||||||   |||         |||||||||||||| |||||||| |||    
T  26315471 aatttgagtgtaccggtacaccaaattattaaattaatgattaaacgagttgttttttttgaagaaaaagaactgttttctatcattgacaattac-ata 26315569  T
Q  189 attagatcttagttaccgaaagtgtcgacgaaataaat 226  Q
    |||| ||| || ||||| |||| |||||||||| ||||    
T  26315570 attaaatcgtatttaccaaaagcgtcgacgaaaaaaat 26315607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 6295475 - 6295557
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| | ||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  6295475 ttttctatcattgacaattataataattaaatcttattcaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 6295557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 24081454 - 24081393
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| ||||| | || ||||||||    
T  24081454 ttttctatcattgacaattataataattaaatcttatttaccaaaagttttgaagaaataaa 24081393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 14715575 - 14715488
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttac 252  Q
    |||||||||||| |||| || |||||||| |||||| ||||| |||| |||||  |||||||  |||||  ||||||||||||| ||||    
T  14715575 ttttctatcattgacaactataataattaaatcttatttaccaaaagcgtcgatcaaataaa-atttactttttttgaatttttattac 14715488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 17833948 - 17834118
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||| |||||    
T  17833948 actcaaaaatttgagtgtaccggcacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattatcaatt 17834047  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  17834048 acaataattagatcttagttactgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 17834118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 48460630 - 48460461
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||        ||||||||||||||||||||||    
T  48460630 actcaaaaatttgagtgtaccggtacaccaaatcatcaaatttatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaatt 48460531  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||    
T  48460530 acaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacatttttttaatttttgttaca 48460461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 23182774 - 23182609
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||    
T  23182774 aaaaatttgagtgttccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagaaaaagaattgttttctatcattaactattacaa 23182675  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  23182674 taattatatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 23182609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 29689314 - 29689145
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||  |||        ||||||||||||||||| ||||    
T  29689314 actcaaaaatttgagtgtactggtacaccaaattatcaaattcatattgaaacgagttgtttttttgaagaaaaataattgttttctatcattaataatt 29689215  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  29689214 acaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 29689145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 225
Target Start/End: Original strand, 31760010 - 31760152
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||        ||||||||||||||||||||||    
T  31760010 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgggttgtttttttgaagaaaaagaattgttttctatcattaacaatt 31760109  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  31760110 acaataattagatcttagttaccgaaagtatcgacgaaataaa 31760152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 100 - 253
Target Start/End: Original strand, 5215054 - 5215210
Alignment:
Q  100 taccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt-caaagnnnnnnnnttgttttctatcattaacaattacaataattagatctt 198  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | |||        ||||||||||||||||||||||||||||||||||||||    
T  5215054 taccggtacaccaaatcatcaaattcatattgaaacgggttgtttttttcgaagaaaaagaattgttttctatcattaacaattacaataattagatctt 5215153  T
Q  199 agttaccgaaagtgtcgacgaaataaatttttaca--ctttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||||||||    
T  5215154 agttaccgaaagtgtcgacgaaataaaattttacattttttttgaatttttgttaca 5215210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 21920081 - 21919933
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtt-ttttcaaagnnnnnnnnttgttttctatcattaacaat 181  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||        | |||||||||||||||||||    
T  21920081 actcaaaaatttgagtgtaccggtacaccaaatcatcaaatttatattgaaacgagttgtttttttcgaagaaaaagaatcgttttctatcattaacaat 21919982  T
Q  182 tacaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  21919981 tacaataattagatcttagttaccaaaagtgtcaacgaaataaaatttt 21919933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 31743317 - 31743489
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttt--tttcaaagnnnnnnnnttgttttctatcattaacaa 180  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||  |||  |||        ||||||||||||||||||||    
T  31743317 actcaaaaatttgagtgtaccagtgcaccaaatcatcaaattaatattaaaacgagttgtttctttttgaagaaaaataattgttttctatcattaacaa 31743416  T
Q  181 ttacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||| |||     |||||||||||||||||||    
T  31743417 ttacaataattagatcttatttaccaaaagtgtcgacggaataaaatttatttttttttgaatttttgttaca 31743489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 253
Target Start/End: Complemental strand, 41769578 - 41769492
Alignment:
Q  166 ttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||  ||||   |||||||||||||||||||    
T  41769578 ttctatcattaacaattacgataattagatcttatttaccaaaagtgtcgacgaaataaa-atttattatttttgaatttttgttaca 41769492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 32670579 - 32670524
Alignment:
Q  93 ttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttc 148  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  32670579 ttgagtgtacgggtacaccaaatcattaaattcatattgaaacgagttgttttttc 32670524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 253
Target Start/End: Original strand, 13806386 - 13806547
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataa 189  Q
    ||||||||| ||||| |||||||||| || ||||| ||| | ||||||||||||||||  |||        ||||||||||||||| |||||||||||||    
T  13806386 aatttgagtataccgatacaccaaattattaaattaataattaaacgagttgtttttttgaagaaaaatatttgttttctatcattgacaattacaataa 13806485  T
Q  190 ttagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||| ||| || ||||| |||| || |||||||| ||  |||||  |||||||| ||||||||||    
T  13806486 ttaaatcatatttaccaaaagcgt-gacgaaattaa-atttactttttttgaaattttgttaca 13806547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 252
Target Start/End: Original strand, 1343043 - 1343206
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttca--aagnnnnnnnnttgttttctatcattaacaattacaat 187  Q
    |||||||||||||||||||||||||| || ||||  ||| | ||||||||||||||||    |||        ||||||||||||||| |||||||||||    
T  1343043 aatttgagtgtaccggtacaccaaattattaaatcaataattaaacgagttgtttttttttgaagaaaaataattgttttctatcattgacaattacaat 1343142  T
Q  188 aattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttac 252  Q
    ||||| ||| || ||||| |||| || || ||||||||  |||||  ||||||||||||| ||||    
T  1343143 aattaaatcgtatttaccaaaagcgttgaagaaataaa-atttactttttttgaatttttattac 1343206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 9682412 - 9682351
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| | ||| ||||||| ||||    
T  9682412 caaaaatttgagtgtaccggtacaccaaatcattaaattaataattaaatgagttgtgtttt 9682351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 11640392 - 11640474
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  11640392 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 11640474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 22639676 - 22639594
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  22639676 ttttctatcattgacaattataataattatatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 22639594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 25411935 - 25411853
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  25411935 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 25411853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 49079350 - 49079432
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  49079350 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 49079432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 43958920 - 43958862
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  43958920 tctatcatttacaattataaaaattaaatcttatttaccaaaagtgtcgacgaaataaa 43958862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 3228338 - 3228399
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  3228338 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 3228399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 12395291 - 12395352
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||||||||| || |||||||| |||||| ||||| |||| ||||| ||||||||    
T  12395291 ttttctatcattaacaactataataattaaatcttatttaccaaaagcgtcgatgaaataaa 12395352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 45701344 - 45701283
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  45701344 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 45701283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 19345709 - 19345791
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| ||||  |||| ||||||||  |||||  |||||||||||||    
T  19345709 ttttctatcattgacaattataataattaaatcttatttaccaaaagcttcgatgaaataaa-atttactttttttgaattttt 19345791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 32823032 - 32823122
Alignment:
Q  161 ttgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttac 252  Q
    ||||||||||||| | ||||||| |||||||| |||||| ||||  |||| || |||||||||||  |||||  ||||||||||||| ||||    
T  32823032 ttgttttctatcactgacaattataataattaaatcttatttactaaaagcgttgacgaaataaa-atttactttttttgaatttttattac 32823122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 116
Target Start/End: Complemental strand, 27800414 - 27800384
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatc 116  Q
    |||||||||||||||||||||||||||||||    
T  27800414 caaaaatttgagtgtaccggtacaccaaatc 27800384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 31311367 - 31311505
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||| ||||||||||||  |||| |||||| | ||||| ||| | ||| ||||||||||||  |||        || |||||||||||| ||||||| ||    
T  31311367 aaaattttgagtgtaccactacatcaaatcgttaaattaataattaaatgagttgtttttttgaagaaaaagaattattttctatcattgacaattataa 31311466  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||| |||||| ||||| ||||| || |||| |||||    
T  31311467 taattaaatcttatttaccaaaagtttcaacgatataaa 31311505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 32670510 - 32670468
Alignment:
Q  211 tgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||    
T  32670510 tgtcgacgaaataaaattttacattttttaaatttttgttaca 32670468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 40856845 - 40856779
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||| ||||||||||||||| |||||||| |||||| ||||| ||||  |||| ||||||| |||||    
T  40856845 ttttttatcattaacaattataataattaaatcttatttaccaaaaggttcgatgaaataatttttt 40856779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 22904801 - 22904740
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||  |||| ||||| ||||||||    
T  22904801 ttttctatcattgacaattataataattaaatcttatttactaaaagcgtcgatgaaataaa 22904740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 27427441 - 27427380
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| |||| || |||||||| |||||| ||||| |||| ||||| ||||||||    
T  27427441 ttttctatcattgacaactataataattaaatcttatttaccaaaagcgtcgatgaaataaa 27427380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 116
Target Start/End: Complemental strand, 27569657 - 27569628
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatc 116  Q
    ||||||||||||||||||||||||||||||    
T  27569657 aaaaatttgagtgtaccggtacaccaaatc 27569628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 35859394 - 35859333
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||| ||||||| | ||||| |||||||| |||||| ||||| |||| ||||||||||||||    
T  35859394 ttttttatcattgataattataataattaaatcttatttaccaaaagagtcgacgaaataaa 35859333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 116
Target Start/End: Complemental strand, 40379346 - 40379317
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatc 116  Q
    ||||||||||||||||||||||||||||||    
T  40379346 aaaaatttgagtgtaccggtacaccaaatc 40379317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 43541879 - 43541940
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||| | |||||| ||| | ||||| |||||||||||||    
T  43541879 ttttctatcattgacaattataataatcaaatcttatttatcaaaagtttcgacgaaataaa 43541940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 15715930 - 15715986
Alignment:
Q  91 atttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    ||||||||||||||||||||| | || | ||||||||| | ||| ||||||||||||    
T  15715930 atttgagtgtaccggtacacccactctttaaattcatagttaaatgagttgtttttt 15715986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 114
Target Start/End: Original strand, 32822957 - 32822985
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaa 114  Q
    |||||||||||||||||||||||||||||    
T  32822957 caaaaatttgagtgtaccggtacaccaaa 32822985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 44957308 - 44957138
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||    
T  44957308 actcaaaaatttgagtgtatcggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaatt 44957209  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  44957208 acaataattagatcttagttaccgaaagtgtcaacgaaataaaattttataatttttgaatttttgttaca 44957138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 52405550 - 52405720
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||        || ||||||||||||| |||||    
T  52405550 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattaaaacgagttgttttttcgaagaaaaagaatttttttctatcattaccaatt 52405649  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  52405650 acaataattagatcttagttacagaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 52405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 4490891 - 4491060
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||        ||||||||||||||||||||||    
T  4490891 actcaaaaatttgagtgtaccagtacaccaaatcatcaaattcatattaaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaatt 4490990  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||| ||||||||||||| |||||    
T  4490991 acaataattagatcttagttaccgaaagtgtcgacaaaataaa-atttacattttttgaattttttttaca 4491060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 31975570 - 31975736
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||   |         ||||||||||||||||||||||||||    
T  31975570 aaaaatttgaatgtaccggtacaccaaatcatcaaattcatattaaaacgagttgtttttttttaaaaaaaaaattgttttctatcattaacaattacaa 31975669  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  31975670 taattagatcttagttaccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 31975736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 83 - 251
Target Start/End: Complemental strand, 40439024 - 40438857
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||        | ||||||||||||||| ||||    
T  40439024 actcaaaaatttgagtgtaccggtacaccaaatcattaaattcatattgaaacgagttgtttttttgaagaaaaagaatcgttttctatcattaataatt 40438925  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgtta 251  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  40438924 acaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgtta 40438857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 19594952 - 19595118
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    ||||||||||||||||  |||||| ||||||| |||||||||||||||||| |||||||||| |||        ||||||||||||||||||||||||||    
T  19594952 aaaaatttgagtgtacttgtacacaaaatcattaaattcatattgaaacgaattgttttttcgaagaaaaataattgttttctatcattaacaattacaa 19595051  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  19595052 taattagatcttagttaccgatagtgtcgacgaaataaaattttacattttttgaatttttgttaca 19595118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 39103928 - 39103757
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||        | ||||||||||||||||||||    
T  39103928 actcaaaaatttgagtgtaccggtacactaaatcatcaaatttatattgaaacgagttgttttttcgaagaaaaagaatcgttttctatcattaacaatt 39103829  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttaca-ctttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||  ||||| |||||||||||||    
T  39103828 acaataattagatcttagttaccaaaagtgtcaacgaaataaaattttacattttttttaatttttgttaca 39103757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 12756019 - 12756189
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaag-nnnnnnnnttgttttctatcattaacaat 181  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||         || ||||||||||||||||||    
T  12756019 actcaaaaatttgagtgtatcggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattttttttctatcattaacaat 12756118  T
Q  182 tacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||| ||||  |||||||||||||    
T  12756119 tacaataattagatcttagttaccgaaagtgtcgacaaaataaa-atttacatttttaaaatttttgttaca 12756189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 86 - 253
Target Start/End: Complemental strand, 39953970 - 39953805
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattaca 185  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||| |||        |||||||| ||||||||||||||||    
T  39953970 caaaaatttgaatgtaccggtacaccaaatcatcaaattcatattgaaacaaattattttttcgaagaaaaagaattgttttcaatcattaacaattaca 39953871  T
Q  186 ataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  39953870 ataattagatcttagttaccgaaagtgtcgacgaaataaa-atttaca-tttttgaatttttgttaca 39953805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 19526741 - 19526910
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||| |||||| | |||||| |||| |||||||||||||| ||| ||||||||||||| |||        ||||||||||||||||||||||    
T  19526741 actcaaaaatttaagtgtatccgtacactaaattatcaaattcatattaaaatgagttgttttttcgaagaaaaagaattgttttctatcattaacaatt 19526840  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  19526841 acaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 19526910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 34927471 - 34927322
Alignment:
Q  104 ggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataattagatcttagtta 203  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||| |||||||||||||||||||||||||    
T  34927471 ggtacactaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaaaaattacaataattagatcttagtta 34927372  T
Q  204 ccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||  ||||||||| ||||||||||||| |||||||||||||    
T  34927371 ccgaaagtgtcagcgaaataaaattttacacttttttaatttttgttaca 34927322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 225
Target Start/End: Complemental strand, 53973846 - 53973704
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||        | ||||||||||||||| ||||    
T  53973846 actcaaaaatttgagtgtaccggtacactaaatcatcaaatttatattgaaacgagttgttttttcgaagaaaaagaatcgttttctatcattaaaaatt 53973747  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  53973746 acaataattagatcttagttaccaaaagtgtcaacgaaataaa 53973704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 31296904 - 31296782
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||    
T  31296904 aaaaatttgagtgtaccggtacactaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaattacaa 31296805  T
Q  187 taattagatcttagttaccgaaa 209  Q
    |||||||||||||||| ||||||    
T  31296804 taattagatcttagttgccgaaa 31296782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 49286998 - 49286873
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||        ||||||||||||||||||||||    
T  49286998 actcaataatttgagtgtaccggtacacaaaatcatcaaattcatattaaaacgagttgt-ttttcgaagaaaaagaattgttttctatcattaacaatt 49286900  T
Q  183 acaataattagatcttagttaccgaaa 209  Q
    |||||||||||||||||||||||||||    
T  49286899 acaataattagatcttagttaccgaaa 49286873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 15060576 - 15060721
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    |||| |||||||||| |||||||||||||||||| || || ||||||||||||||||||||||  |||        ||| ||||||||||||||||||||    
T  15060576 tcaagaatttgagtgcaccggtacaccaaatcattaatttaatattgaaacgagttgtttttttgaagaaaaattattgatttctatcattaacaattac 15060675  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    ||||| ||||||||| ||| | ||||| |||||||||||| |||||    
T  15060676 aataactagatcttatttaacaaaagtatcgacgaaataatttttt 15060721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 253
Target Start/End: Complemental strand, 34584546 - 34584402
Alignment:
Q  109 accaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataattagatcttagttaccgaa 208  Q
    |||||||||||||||| |||||||||||||||||||||| ||||        ||||||||||||| ||||||||||||||||||||||||| ||||  ||    
T  34584546 accaaatcatcaaattaatattgaaacgagttgtttttttaaagaaaaataattgttttctatcactaacaattacaataattagatcttatttactaaa 34584447  T
Q  209 agtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    | || ||| |||||||| |||     |||||||||||||||||||    
T  34584446 aatgccgatgaaataaaatttacttttttttgaatttttgttaca 34584402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 253
Target Start/End: Original strand, 52940504 - 52940667
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttca-aagnnnnnnnnttgttttctatcattaacaattacaata 188  Q
    ||||||||||||||||| |||||||| || ||||| ||| | ||||||||||||||||   |||        ||||||||||||||| ||||||||||||    
T  52940504 aatttgagtgtaccggtgcaccaaattattaaattaataattaaacgagttgttttttttgaagaaaaataattgttttctatcattgacaattacaata 52940603  T
Q  189 attagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||| ||| || ||||| |||| ||||||||||||||  |||||  |||||||||||||||||||    
T  52940604 attaaatcgtatttaccaaaagcgtcgacgaaataaa-atttactttttttgaatttttgttaca 52940667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 251
Target Start/End: Original strand, 4695324 - 4695490
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||| || ||||||| |||||||||||||||||| || || ||||||||||||||||||||||  |||        ||||||| ||||||||||||||    
T  4695324 actcaagaacttgagtgcaccggtacaccaaatcattaatttaatattgaaacgagttgtttttt-gaagaaaaataattgttttatatcattaacaatt 4695422  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgtta 251  Q
    ||||||  ||||||||| ||| | ||||||| | | |||||||  |||||  |||||||||||||||||    
T  4695423 acaatagctagatcttatttaacaaaagtgttggcaaaataaa-atttactttttttgaatttttgtta 4695490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 595661 - 595545
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||| ||||||||||||||| ||| |||| || ||||| ||||||||   | |||||||||| |||        ||||||||||||||||| ||||    
T  595661 actcaaaagtttgagtgtaccggtgcactaaattattaaattaatattgaaggcaattgttttttcgaagaaaaagaattgttttctatcattaataatt 595562  T
Q  183 acaataattagatctta 199  Q
    |||||||||||||||||    
T  595561 acaataattagatctta 595545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 9580048 - 9579917
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataa 189  Q
    |||||||| ||||||||||| ||||| || ||||| ||| | ||||||||||||||||  |||         |||||||||||||| |||||||||||||    
T  9580048 aatttgagggtaccggtacatcaaattattaaattaataattaaacgagttgttttttttaagaaaaaaatctgttttctatcattgacaattacaataa 9579949  T
Q  190 ttagatcttagttaccgaaagtgtcgacgaaa 221  Q
    ||| ||| || ||||| |||| ||||||||||    
T  9579948 ttaaatcgtatttaccaaaagcgtcgacgaaa 9579917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 9585743 - 9585612
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataa 189  Q
    |||||||| ||||||||||| ||||| || ||||| ||| | ||||||||||||||||  |||         |||||||||||||| |||||||||||||    
T  9585743 aatttgagggtaccggtacatcaaattattaaattaataattaaacgagttgttttttttaagaaaaaaatctgttttctatcattgacaattacaataa 9585644  T
Q  190 ttagatcttagttaccgaaagtgtcgacgaaa 221  Q
    ||| ||| || ||||| |||| ||||||||||    
T  9585643 ttaaatcgtatttaccaaaagcgtcgacgaaa 9585612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 43349334 - 43349286
Alignment:
Q  205 cgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  43349334 cgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 43349286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 13548790 - 13548729
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| | ||| ||||||| ||||    
T  13548790 caaaaatttgagtgtaccggtacaccaaatcattaaattaataattaaatgagttgtgtttt 13548729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 18052244 - 18052156
Alignment:
Q  165 tttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttaca-ctttttgaatttttgttaca 253  Q
    ||||||||||| |||||||||||||||| ||| || ||||| |||| ||||||||||||||  ||||||  ||||| |||||||||||||    
T  18052244 tttctatcattgacaattacaataattaaatcgtatttaccaaaagcgtcgacgaaataaa-atttacattttttttaatttttgttaca 18052156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 19627697 - 19627758
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||||||||||| ||||||||||||||| |||   ||||||||||||| |||||    
T  19627697 ttttctatcattaacaattataataattagatcttatttatgaaaagtgtcgacgacataaa 19627758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 1792136 - 1792054
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||  |||||||||| ||||||||  |||||  |||||||||||||    
T  1792136 ttttctatcattgacaattataataattaaatcttatttactaaaagtgtcgatgaaataaa-atttactttttttgaattttt 1792054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 6882842 - 6882760
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  6882842 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 6882760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 17370585 - 17370503
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  17370585 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 17370503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 48207175 - 48207257
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  48207175 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 48207257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 27950564 - 27950498
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||| ||||||||| ||||| |||||||| |||||| ||||| ||||| |||||||||||| |||||    
T  27950564 ttttttatcattaataattataataattaaatcttatttaccaaaagtttcgacgaaataatttttt 27950498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 16601631 - 16601691
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||||||||||||||||||||||||||||| | ||||| ||| | ||| ||||||| ||||    
T  16601631 aaaaatttgagtgtaccggtacaccaaatcgttaaattaataattaaatgagttgtatttt 16601691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 25684402 - 25684342
Alignment:
Q  165 tttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  25684402 tttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 25684342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 46688119 - 46688151
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaat 115  Q
    |||||||||||||||||||||||||||||||||    
T  46688119 actcaaaaatttgagtgtaccggtacaccaaat 46688151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 15033526 - 15033561
Alignment:
Q  164 ttttctatcattaacaattacaataattagatctta 199  Q
    |||||||||||||| |||||||||||||||||||||    
T  15033526 ttttctatcattaataattacaataattagatctta 15033561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 39380786 - 39380747
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaatt 124  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  39380786 tcaaaaatttaagtgtaccggtacaccaaatcattaaatt 39380747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 52324347 - 52324292
Alignment:
Q  92 tttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    ||||||||||||||||||||||| ||| ||||| ||||| |||  |||||||||||    
T  52324347 tttgagtgtaccggtacaccaaagcattaaattaatatttaaattagttgtttttt 52324292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 52415070 - 52415152
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||  ||||||||  |||||  |||||||||||||    
T  52415070 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcggtgaaataaa-atttactttttttgaattttt 52415152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 21722274 - 21722332
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||  |||||||||||||||||||    
T  21722274 tctatcatttacaattataaaaattaaatcttatttactaaaagtgtcgacgaaataaa 21722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 22789888 - 22789830
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||||| ||||||||||||    
T  22789888 tctatcatttacaattataaaaattaaatcttatttaccaaaagtgccgacgaaataaa 22789830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 30168407 - 30168346
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| | ||| ||||||||    
T  30168407 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgacgatgaaataaa 30168346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 582794 - 582850
Alignment:
Q  91 atttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    ||||||||||||||||||||  | |||| ||||||||| | ||| ||||||||||||    
T  582794 atttgagtgtaccggtacactcactcattaaattcatagttaaatgagttgtttttt 582850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 7435530 - 7435700
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||        ||||||||||||||||| ||||    
T  7435530 actcaaaaatttgagtgtaccggtacaccaaatcatcaaatttatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaaaaatt 7435629  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  7435630 acaataattagatcttagttatcgaaagtgtcaacgaaataaaattttacactttttgaatttttgttaca 7435700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 84 - 253
Target Start/End: Complemental strand, 38207919 - 38207751
Alignment:
Q  84 ctcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatta 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||    
T  38207919 ctcaaaaatttgagtgtatcggtacaccaaatcatcaaattcatattgaaacgagttgttttt-caaagaaaaagaattgttttctatcattaacaatta 38207821  T
Q  184 caataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  38207820 caataattagatcttagttgccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 38207751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 89 - 253
Target Start/End: Complemental strand, 24594245 - 24594082
Alignment:
Q  89 aaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaata 188  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||        || |||||||||||||||||||||||||    
T  24594245 aaatttgagtgtaccggtacaccaaatcatcaaatttatattgaaaggagttgttttttcaaagaaaaagaattattttctatcattaacaattacaata 24594146  T
Q  189 attagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||    
T  24594145 attagatcttagttaccgaaagtgtcgacaaaataaa-atttacattttttgaatttttgttaca 24594082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 253
Target Start/End: Original strand, 40054607 - 40054774
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    |||||||| ||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||| |||        || |||||||||||||||||||||    
T  40054607 tcaaaaatctgagtataccggtacacaaaatcattaaatttatattgaaacgagttgttttttcgaagaaaaagaattattttctatcattaacaattac 40054706  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  40054707 aataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 40054774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 44808421 - 44808590
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||| | |||||| ||||||||||| |||||||| ||||| ||||| ||||||||||| |||        ||||||||||||||||||||||    
T  44808421 actcaaaaatttaaatgtacccgtacaccaaattatcaaatttatattaaaacgggttgttttttcgaagaaaaagaattgttttctatcattaacaatt 44808520  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  44808521 acaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 44808590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 45650028 - 45650194
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||        |||||||||||||| |||||||| ||    
T  45650028 aaaaatttgagtgtaccggtacaccaaatcatcaaatttatattgaaacgagttattttttcgaagaaaaagaattgttttctatcatcaacaattataa 45650127  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||| || |||||||||||||||||||  |||||||| ||||| | |||||||||||||||||||    
T  45650128 taattaaattttagttaccgaaagtgtcggtgaaataaaattttatattttttgaatttttgttaca 45650194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 43916714 - 43916566
Alignment:
Q  104 ggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataattagatcttagtta 203  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||    
T  43916714 ggtacaacaaattatcaaattcatattaaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaattacaataattagatcttagtta 43916615  T
Q  204 ccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  43916614 ccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 43916566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 51991548 - 51991717
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||| ||||||| |||||| | ||||||||||| |||||||| ||||  ||||||||||||||||| |||        ||||||||||||||||||||||    
T  51991548 actccaaaatttaagtgtatccgtacaccaaattatcaaatttatatcaaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaatt 51991647  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||    
T  51991648 acaataattagatcttagttaccgaaaatgtcgacgaaataaa-atttacattttttgaatttttgttaca 51991717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 1845381 - 1845298
Alignment:
Q  163 gttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  1845381 gttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaattttt 1845298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 24451755 - 24451924
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||| |||| |||||||   |||        || |||||||||||||||||||    
T  24451755 actcaaaaatttgagtgtaccggtgcaccaaattactaaattaatattgaagcgagatgtttttatgaagaaaaagaattattttctatcattaacaatt 24451854  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    | ||||||||||| ||| ||||| |||||||||||||||||||  |||||  |||||||||||||||||||    
T  24451855 ataataattagattttatttaccaaaagtgtcgacgaaataaa-atttactttttttgaatttttgttaca 24451924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 51005102 - 51005011
Alignment:
Q  161 ttgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||    |||||||||||||||||||    
T  51005102 ttgttttctatcattaacaattacaataattagatcttatttaccaaaagtgtcgacggaataaaattttttt-tttttgaatttttgttaca 51005011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 43146522 - 43146614
Alignment:
Q  162 tgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttta-cactttttgaatttttgttaca 253  Q
    ||||||||| |||| |||||||||||||||| ||| || ||||| |||| |||||||||||||||| |||  | ||||| |||||||||||||    
T  43146522 tgttttctaccattgacaattacaataattaaatcgtatttaccaaaagcgtcgacgaaataaattattattatttttttaatttttgttaca 43146614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 47601668 - 47601728
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||||||||||||||||||||||||||||||| ||||||||| | |||  |||||||||||    
T  47601668 aaaaatttgagtgtaccggtacaccaaatcattaaattcataattaaataagttgtttttt 47601728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 44978985 - 44979048
Alignment:
Q  162 tgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||||| |||||||||||||||| ||| || ||||| |||| ||||||||||||||    
T  44978985 tgttttctatcattgacaattacaataattaaatcgtatttaccaaaagcgtcgacgaaataaa 44979048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 13216405 - 13216323
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  13216405 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 13216323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 43536974 - 43537056
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  43536974 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 43537056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 4155881 - 4155939
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  4155881 tctatcatttacaattataaaaattaaatcttatttaccaaaagtgtcgacgaaataaa 4155939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 225
Target Start/End: Original strand, 14077355 - 14077488
Alignment:
Q  92 tttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataatt 191  Q
    ||||||||||||||||||||||| ||| ||||| ||| | |||  ||||||||||| ||          || |||||||||||| ||||||| |||||||    
T  14077355 tttgagtgtaccggtacaccaaagcattaaattaataattaaattagttgttttttgaagaaaaaataattattttctatcattgacaattataataatt 14077454  T
Q  192 agatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    | || ||| ||||| |||| ||||| ||||||||    
T  14077455 aaattttatttaccaaaagcgtcgatgaaataaa 14077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 44978893 - 44978950
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||||||||||||||||||||||||| || ||||| ||| | ||||||||| ||||||    
T  44978893 aatttgagtgtaccggtacaccaaattattaaattaataattaaacgagttttttttt 44978950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 49982763 - 49982702
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  49982763 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 49982702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 26424148 - 26424088
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataa 224  Q
    |||||||||||| |||||||||||||||| ||| || ||||| |||| ||||| |||||||    
T  26424148 ttttctatcattgacaattacaataattaaatcgtatttaccaaaagcgtcgatgaaataa 26424088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 26424230 - 26424166
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||||| ||||||||||||||||||||| |||| || ||||| ||| | ||| ||||||||||||    
T  26424230 actcaacaatttgagtgtaccggtacactaaattattaaattaataattaaatgagttgtttttt 26424166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 51161164 - 51161204
Alignment:
Q  107 acaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  51161164 acactaaatcatcaaattaatattgaaacgagttgtttttt 51161204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 39085023 - 39084941
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||| | |||| ||||| ||||||||  |||||  |||||||||||||    
T  39085023 ttttctatcattgacaattataataattaaatcttatttatcaaaagcgtcgatgaaataaa-atttactttttttgaattttt 39084941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 39871694 - 39871613
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  39871694 ttttctatcattgacaattataataattaaatctta-ttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 39871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 41568542 - 41568624
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| |||||  ||| ||||| ||||||||  |||||  |||||||||||||    
T  41568542 ttttctatcattgacaattataataattaaatcttatttaccataagcgtcgatgaaataaa-atttactttttttgaattttt 41568624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 17644693 - 17644627
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||||||||||| ||||||| |||||||| || ||| ||||| ||||  |||||||||||| |||||    
T  17644693 ttttctatcattgacaattataataattacattttatttaccaaaagcttcgacgaaataatttttt 17644627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 29878008 - 29877950
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  29878008 tctatcatttacaattataaaaattaaatcttatttaccaaaagcgtcgacgaaataaa 29877950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 12227220 - 12227281
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| | ||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  12227220 ttttctatcattgataattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 12227281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 33082086 - 33082147
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| | ||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  33082086 ttttctatcattgataattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 33082147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 35912941 - 35912880
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||| | ||||||||    
T  35912941 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtccatgaaataaa 35912880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 51161221 - 51161282
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||||| ||||||||||||||| || ||| ||| | |||||||| | ||||||||    
T  51161221 ttttctatcattatcaattacaataattaaattttatttatcaaaagtgtccaagaaataaa 51161282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 10179186 - 10179122
Alignment:
Q  161 ttgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||||||||  | ||||| |||||||| |||||| ||||| |||  ||||||||||||||    
T  10179186 ttgttttctatcatctataattataataattaaatcttatttaccaaaaacgtcgacgaaataaa 10179122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 7e-61; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 15362858 - 15362689
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||         ||||||||||||||||||||||    
T  15362858 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttaaaaa-aaaaagaattgttttctatcattaacaatt 15362760  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  15362759 acaataattagatcttagttaccgaaagtgtcgacaaaataaaattttacattttttgaatttttgttaca 15362689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 41555814 - 41555645
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||    
T  41555814 actcaaaaatttaagtgtatcggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaaaaattgttttctatcattaacaatt 41555715  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||    
T  41555714 acaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacatttttttaatttttgttaca 41555645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 83 - 251
Target Start/End: Complemental strand, 17809418 - 17809251
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |||        ||||||||||||||||||||||    
T  17809418 actcaaaaatttgagtgtaccggtacaccaaattatgaaattcatattaaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaatt 17809319  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgtta 251  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  17809318 acaataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgtta 17809251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 713739 - 713569
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt-caaagnnnnnnnnttgttttctatcattaacaat 181  Q
    |||||||||||| |||||| ||||||||||||||||| |||| |||||||||||||||||||||| | |||        |||||||||||||||||||||    
T  713739 actcaaaaatttaagtgtatcggtacaccaaatcatctaatttatattgaaacgagttgtttttttcgaagaaaaagaattgttttctatcattaacaat 713640  T
Q  182 tacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||    
T  713639 tacaataattagatcttagttatcgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 713569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 38600200 - 38600030
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| |||        ||||||||||||||||||||||    
T  38600200 actcaaaaatttaagtgtactcgtacaccaaatcatcaaatttatattgaaacgaattgttttttcgaagaaaaagaattgttttctatcattaacaatt 38600101  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||| ||||| ||||||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  38600100 acagtaatttgatcttagttaccaaaagtgtcaacgaaataaaattttacattttttgaatttttgttaca 38600030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 39090008 - 39089836
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttct---atcattaaca 179  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||        || |||| |   ||||||||||    
T  39090008 actcaaaaatttgagtgaaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaataattttttttttcaatcattaaca 39089909  T
Q  180 attacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||  |||||| |||||||||||||||||||    
T  39089908 attacaataattagatcttagttatcgaaagtatcgacgaaataaa-atttacattttttgaatttttgttaca 39089836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 34852697 - 34852555
Alignment:
Q  112 aaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnn-ttgttttctatcattaacaattacaataattagatcttagttaccgaaag 210  Q
    ||||||||||||| ||||||||| |||||||||||||||||         || |||||||||||||||||||||||||||||||||||||||||||||||    
T  34852697 aaatcatcaaatttatattgaaaagagttgttttttcaaagaaaaaaaaattattttctatcattaacaattacaataattagatcttagttaccgaaag 34852598  T
Q  211 tgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||    
T  34852597 tgtcggcgaaataaaattttacattttttgaatttttgttaca 34852555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 225
Target Start/End: Complemental strand, 22622806 - 22622664
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||| || ||||||| |||||||||| ||||||| || || |||||||||||||||||||||| ||||        ||||||||||||||||||||||    
T  22622806 actcaagaacttgagtgcaccggtacactaaatcattaatttaatattgaaacgagttgtttttttaaagaaaaataattgttttctatcattaacaatt 22622707  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||| ||||||||| ||| | ||| |||||||||||||||    
T  22622706 acaataactagatcttatttaacaaaaatgtcgacgaaataaa 22622664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 253
Target Start/End: Original strand, 40810452 - 40810605
Alignment:
Q  100 taccggtacaccaaatcatcaaattcatattgaaacgagttgttttttca-aagnnnnnnnnttgttttctatcattaacaattacaataattagatctt 198  Q
    |||||||||||||||| || |||||||||||||||||| || ||||||   |||        | ||||| | ||||||| ||||||||||||||||||||    
T  40810452 taccggtacaccaaattattaaattcatattgaaacgaattattttttttgaagaaaaagaatcgttttatgtcattaataattacaataattagatctt 40810551  T
Q  199 agttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||| |||||||||||||||||||||  |||| | |||||||||||||||||||    
T  40810552 agttatcgaaagtgtcgacgaaataaa-atttaaattttttgaatttttgttaca 40810605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 253
Target Start/End: Complemental strand, 15426405 - 15426244
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataa 189  Q
    |||||||||||||||||||||||||| || ||||| ||| | ||||||||||||||||  |||          ||||||||||||| |||||||||||||    
T  15426405 aatttgagtgtaccggtacaccaaattattaaattaataattaaacgagttgtttttttgaagaaaaagaaccgttttctatcattgacaattacaataa 15426306  T
Q  190 ttagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||| ||| || ||||| |||| ||||||||||||||  |||||| ||||| |||||||||||||    
T  15426305 ttaaatcgtatttaccaaaagcgtcgacgaaataaa-atttaca-ttttttaatttttgttaca 15426244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 15334441 - 15334337
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    |||||||||| |||||||||||||| ||||| |||||||| |||||||| |||||||||||||  |||        ||||||||||||||||| ||||||    
T  15334441 tcaaaaatttaagtgtaccggtacatcaaattatcaaattaatattgaagcgagttgtttttttgaagaaaaagaattgttttctatcattaataattac 15334342  T
Q  185 aataa 189  Q
    |||||    
T  15334341 aataa 15334337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 34188685 - 34188741
Alignment:
Q  197 ttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  34188685 ttagttaccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 34188741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 4786379 - 4786431
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaac 135  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  4786379 actcaaaaatttaagtgtaccgatacaccaaatcatcaaattcatattgaaac 4786431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 2859723 - 2859605
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||||||||| ||||||||||||| | | | ||| |||||||||||| |||         || |||||||||||||| ||||| ||    
T  2859723 aaaaatttgagtgtaccggtacacaaaatcatcaaattaacaattaaatgagttgttttttgaaaaaaaaataattattttctatcattaataattataa 2859624  T
Q  187 taattagatcttagttacc 205  Q
    |||||| |||||| |||||    
T  2859623 taattaaatcttatttacc 2859605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 230
Target Start/End: Complemental strand, 45690886 - 45690743
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatc-atcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    ||||||||||||||||||||||||||||||| ||  |||| ||  | ||| |||||||| |||  |||        || |||| |||||||||||||||     
T  45690886 caaaaatttgagtgtaccggtacaccaaatcgat--aattaatgattaaatgagttgttgtttttaagaaaaagaattattttttatcattaacaattat 45690789  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||||||| |||||| ||||| ||||| ||||||||||||||||||    
T  45690788 aataattaaatcttatttaccaaaagtttcgacgaaataaattttt 45690743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 253
Target Start/End: Complemental strand, 8362788 - 8362624
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtt-ttttcaaagnnnnnnnnttgttttctatcattaacaattacaata 188  Q
    |||||||||||||||||||||||||| || ||||| ||| | |||||||||||| ||||  |||         |||||||||||||| ||||||||||||    
T  8362788 aatttgagtgtaccggtacaccaaattattaaattaataattaaacgagttgttttttttgaagaaaaataactgttttctatcattgacaattacaata 8362689  T
Q  189 attagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||| ||| || ||||| |||| ||| | ||||||| ||| |    ||||| |||||||||||||    
T  8362688 attaaatcgtatttaccaaaagcgtcaatgaaataattttattttttttttaaatttttgttaca 8362624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 4108404 - 4108486
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| |||||||||| ||||| ||||||||  |||||  |||||||||||||    
T  4108404 ttttctatcattgacaattataataattaaatcttatttaccgaaagcgtcgatgaaataaa-atttactttttttgaattttt 4108486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 41184584 - 41184645
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||||||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  41184584 ttttctatcattaacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 41184645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 12071251 - 12071341
Alignment:
Q  162 tgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||| |||||||||||||||| ||| || ||| | |||| | ||||||||||||  ||||   |||||||||||||||||||    
T  12071251 tgttttctatcattgacaattacaataattaaatcgtatttatcaaaagcgacgacgaaataaa-atttattttttttgaatttttgttaca 12071341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 36428816 - 36428734
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  36428816 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 36428734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 38030863 - 38030805
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  38030863 tctatcatttacaattataaaaattaaatcttatttaccaaaagtgtcgacgaaataaa 38030805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 25332937 - 25332876
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| |||||||||| ||||| ||| || ||||| |||| ||||||||||||||    
T  25332937 ttttctatcattgacaattacaagaattaaatcgtatttaccaaaagcgtcgacgaaataaa 25332876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 25740083 - 25740171
Alignment:
Q  163 gttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttac 252  Q
    ||||||||||||| ||||||| |||||| | |||||| ||||| ||||| |||| |||||||| |||||   ||||||||||||| ||||    
T  25740083 gttttctatcattgacaattataataatcaaatcttatttaccaaaagtttcgatgaaataaaatttta-tttttttgaatttttattac 25740171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 28318350 - 28318289
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  28318350 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 28318289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 252
Target Start/End: Original strand, 37989052 - 37989215
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||| ||||||||||||||||||||| ||||| | | | ||| ||||| ||||||  |||        || |||||||||||| ||||| | ||    
T  37989052 aaaaatttgaatgtaccggtacaccaaatcattaaattaacaattaaatgagtt-ttttttttaagaaaaagaattattttctatcattgacaatcataa 37989150  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttac 252  Q
    |||| | |||||| ||||| ||||| ||||| |||||||  |||||  ||||||||||||| ||||    
T  37989151 taatcaaatcttatttaccaaaagtttcgacaaaataaa-atttactttttttgaatttttattac 37989215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 225
Target Start/End: Complemental strand, 40288091 - 40287952
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    |||||| ||||||||||||||||||||||||| | ||||| |   | ||| |||||||||||| || |        || |||||||||||| |||||||     
T  40288091 tcaaaattttgagtgtaccggtacaccaaatcgttaaattaaccattaaatgagttgttttttgaa-gaaaaagaattattttctatcattcacaattat 40287993  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||| | |||||| ||||| ||||  |||||||||||||    
T  40287992 aataatcaaatcttatttaccaaaagcttcgacgaaataaa 40287952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 15176440 - 15176522
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    ||||||||||||  |||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||| | |||||||||||||    
T  15176440 ttttctatcatttgcaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttatattttttgaattttt 15176522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 16718733 - 16718815
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| | ||| ||||||||  |||||  |||||||||||||    
T  16718733 ttttctatcattgacaattataataattaaatcttatttaccaaaagcggcgatgaaataaa-atttactttttttgaattttt 16718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 33429230 - 33429312
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||  ||||||||  |||||  |||||||||||||    
T  33429230 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgttgaaataaa-atttactttttttgaattttt 33429312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 43359201 - 43359283
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| |||||  ||| ||||| ||||||||  |||||  |||||||||||||    
T  43359201 ttttctatcattgacaattataataattaaatcttatttaccataagcgtcgatgaaataaa-atttactttttttgaattttt 43359283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 8504335 - 8504254
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttt 246  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||  ||||| ||||||||  |||||  ||||||||||||    
T  8504335 ttttctatcattgacaattataataattaaatcttatttaccaaaaccgtcgatgaaataaa-atttactttttttgaatttt 8504254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 5615478 - 5615539
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| |||||||||||||||  |||||| ||| | ||||  |||||||||||||    
T  5615478 ttttctatcattgacaattacaataattcaatcttatttatcaaaagcttcgacgaaataaa 5615539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 11088236 - 11088297
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||| |||||||||||||||||||||||||  | ||||| ||| | ||| ||||||||||||    
T  11088236 caaatatttgagtgtaccggtacaccaaattgttaaattaataattaaaagagttgtttttt 11088297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 2283472 - 2283385
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttac 252  Q
    |||||||||||| ||||||| |||||||| || ||| |||   |||||||||| ||||||||  |||||  ||||||||||||| ||||    
T  2283472 ttttctatcattgacaattataataattaaattttatttattaaaagtgtcgaagaaataaa-atttactttttttgaatttttattac 2283385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 29107942 - 29107773
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||        ||||||| ||||||||||||||    
T  29107942 actcaaaaatttgagtgtacttgtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaagaa-ttgttttttatcattaacaatt 29107844  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  29107843 acaataattagatcttagttaccgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 29107773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 85 - 253
Target Start/End: Original strand, 7885896 - 7886063
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattac 184  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||    
T  7885896 tcaaaaatctgagtgtaccggtacatcaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaattac 7885995  T
Q  185 aataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  7885996 aataattagatcttagttaccgaaagtgtcgacgaaataaa-atttacattttttgaatttttgttaca 7886063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 44579040 - 44578874
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||    
T  44579040 aaaaatttgaatatatcggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaagaattgttttctatcattaacaattacaa 44578941  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  44578940 taattagatcttagttaccgaaagtgtcggcgaaataaaattttacattttttgaatttttgttaca 44578874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 31893722 - 31893553
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| |||  |||        ||||||||||||||||||||||    
T  31893722 actcaaaaatttaagtgtaccggtacaccaaattatcaaattaatattgaaacgagttgttcttttgaagaaaaagaattgttttctatcattaacaatt 31893623  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    | ||||||||||||||| ||  | |||||||||||||||||||  |||||  |||||||||||| ||||||    
T  31893622 ataataattagatcttatttttcaaaagtgtcgacgaaataaa-atttactttttttgaattttcgttaca 31893553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 253
Target Start/End: Original strand, 27970036 - 27970198
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataa 189  Q
    ||||||||||||||||| |||||||| || | ||| ||| | ||||||||||||||||  |||        ||||||||||||||| |||||||||||||    
T  27970036 aatttgagtgtaccggtgcaccaaattattatattaatagttaaacgagttgtttttttgaagaaaaataattgttttctatcattgacaattacaataa 27970135  T
Q  190 ttagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||| ||| || ||||| |||| ||||||||||||||  |||||  ||||| |||||||||||||    
T  27970136 ttaaatcgtatttaccaaaagcgtcgacgaaataaa-atttacttttttttaatttttgttaca 27970198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 9712785 - 9712656
Alignment:
Q  96 agtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataattagat 195  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||||| ||  |||        ||||||| ||| ||||||  |||||||||||||||    
T  9712785 agtgtaccggtatatcaaatcatcaaattaatattgaaacgagttgtttgttttaagaaaaagaattgttttttattattaactgttacaataattagat 9712686  T
Q  196 cttagttaccgaaagtgtcgacgaaataaa 225  Q
     ||| ||||| |||||||||||||||||||    
T  9712685 attatttaccaaaagtgtcgacgaaataaa 9712656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 38765083 - 38764987
Alignment:
Q  129 ttgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||||||||||| |||        | ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  38765083 ttgaaacgagttgttttttcgaagaaaaagaatcgttttctatcattaacaattataataattagatcttagttaccaaaagtgtcaacgaaataaa 38764987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 15259375 - 15259318
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagtt 140  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||    
T  15259375 actcaaaaattcgagtgtaccggtacaccatatcatcaaattaatattgaaacgagtt 15259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 253
Target Start/End: Complemental strand, 34047799 - 34047636
Alignment:
Q  90 aatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttca-aagnnnnnnnnttgttttctatcattaacaattacaata 188  Q
    |||||||||||||||||||||||||| || ||||| ||  | ||||||||||||||||   |||         |||||||||||||| ||||||||||||    
T  34047799 aatttgagtgtaccggtacaccaaattattaaattaatgattaaacgagttgttttttttgaagaaaaagaactgttttctatcattgacaattacaata 34047700  T
Q  189 attagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||| ||| || ||||| |||  ||||||||||||||  | |||  |||||||||||||||||||    
T  34047699 attaaatcgtatttaccaaaaacgtcgacgaaataaa-atctactttttttgaatttttgttaca 34047636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 40824561 - 40824622
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||||||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  40824561 ttttctatcattaacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 40824622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 42165212 - 42165151
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| |||||||||||||||| ||| || ||||| |||| ||||||||||||||    
T  42165212 ttttctatcattgacaattacaataattaaatcgtatttaccaaaagcgtcgacgaaataaa 42165151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 2731887 - 2731954
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttta 231  Q
    |||||||||||  | |||||||||||||| |||||| ||||| ||| ||||||||||||||| |||||    
T  2731887 ttttctatcatctataattacaataattaaatcttatttaccaaaaatgtcgacgaaataaaatttta 2731954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 34520668 - 34520750
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||| | |||||||||| ||||||||  |||||  |||||||||||||    
T  34520668 ttttctatcattgacaattataataattaaatcttatttatcaaaagtgtcgatgaaataaa-atttactttttttgaattttt 34520750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 9509163 - 9509105
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  9509163 tctatcatttacaattataaaaattaaatcttatttaccaaaagtgtcgacgaaataaa 9509105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 32887972 - 32887914
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  32887972 tctatcatttacaattataaaaattaaatcttatttaccaaaagtgtcgacgaaataaa 32887914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 40972374 - 40972308
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||| |||||    
T  40972374 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataatttttt 40972308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 2880238 - 2880177
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  2880238 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 2880177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 5982495 - 5982434
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  5982495 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 5982434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 29604323 - 29604262
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||||||||||| |||||||  |||||| ||||| |||| ||||| ||||||||    
T  29604323 ttttctatcattaacaattataataatttaatcttatttaccaaaagcgtcgatgaaataaa 29604262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 32071549 - 32071488
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| ||||  |||||||||||||    
T  32071549 ttttctatcattgacaattataataattaaatcttatttaccaaaagcttcgacgaaataaa 32071488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 36569958 - 36569897
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||    
T  36569958 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa 36569897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 5273156 - 5273238
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    ||||||||||||  |||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  5273156 ttttctatcattggcaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 5273238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 17069542 - 17069460
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||  ||||| ||||||||  |||||  |||||||||||||    
T  17069542 ttttctatcattgacaattataataattaaatcttatttaccaaaaacgtcgatgaaataaa-atttactttttttgaattttt 17069460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 17578731 - 17578813
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||  ||||| ||||||||  |||||  |||||||||||||    
T  17578731 ttttctatcattgacaattataataattaaatcttatttaccaaaaacgtcgatgaaataaa-atttactttttttgaattttt 17578813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 17838724 - 17838661
Alignment:
Q  84 ctcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||||| |||||||||||| |||||||||||| || ||||| || || ||| ||||||||||||    
T  17838724 ctcaaatatttgagtgtacgggtacaccaaataattaaattaatttttaaatgagttgtttttt 17838661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 41674581 - 41674663
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||| | |||| ||||| ||||||||  |||||  |||||||||||||    
T  41674581 ttttctatcattgacaattataataattaaatcttatttatcaaaagcgtcgatgaaataaa-atttactttttttgaattttt 41674663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 43331841 - 43331923
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| |||| || |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  43331841 ttttctatcattgacaactataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 43331923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 44309663 - 44309745
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| |||| || |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  44309663 ttttctatcattgacaactataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 44309745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 44637229 - 44637147
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| || || ||||||||  |||||  |||||||||||||    
T  44637229 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtggatgaaataaa-atttactttttttgaattttt 44637147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 116
Target Start/End: Original strand, 12801127 - 12801157
Alignment:
Q  86 caaaaatttgagtgtaccggtacaccaaatc 116  Q
    |||||||||||||||||||||||||||||||    
T  12801127 caaaaatttgagtgtaccggtacaccaaatc 12801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 12801204 - 12801270
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    |||| ||||||||||||||| |||||||| |||||| ||| | ||||  |||||||||||| |||||    
T  12801204 ttttatatcattaacaattataataattaaatcttatttaacaaaagcttcgacgaaataatttttt 12801270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 23870574 - 23870516
Alignment:
Q  167 tctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    ||||||||| ||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  23870574 tctatcatttacaattataaaaattaaatcttatttaccaaaagcgtcgacgaaataaa 23870516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 40267503 - 40267559
Alignment:
Q  91 atttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    ||||||||||||||||||||| | || | ||||||||| | ||| ||||||||||||    
T  40267503 atttgagtgtaccggtacacccactctttaaattcatagttaaatgagttgtttttt 40267559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 10690 - 10833
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||    
T  10690 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcgaagaaaaaaaattgttttctatcattaacaattacaa 10789  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10790 taattagatcttagttaccgaaagtgtcgacgaaataaattttt 10833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1844 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold1844
Description:

Target: scaffold1844; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 1137 - 1302
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaattacaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||        ||||||||||||||||||||||| ||    
T  1137 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgggttgttttt-cgaagaaaaagaattgttttctatcattaacaattataa 1235  T
Q  187 taattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  1236 taattagatcttagttatcgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 1302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 214157 - 214326
Alignment:
Q  83 actcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| | |||        ||||||||||||||||||||||    
T  214157 actcaaaaatttgagtgtactggtacacaaaatcatcaaattcatattgaaacgagttattttt-cgaagaaaaaaaattgttttctatcattaacaatt 214255  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  214256 acaataattatatcttagttatcgaaagtgtcgacgaaataaaattttacattttttgaatttttgttaca 214326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 89 - 253
Target Start/End: Original strand, 38003 - 38168
Alignment:
Q  89 aaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgttttttca-aagnnnnnnnnttgttttctatcattaacaattacaat 187  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| | |||        ||||||||||||||| |||||||||||    
T  38003 aaatttgagtgtatcggtacaccaaatcatcaaatttatattgaaacgggttgtttttttagaagaaaacgaattgttttctatcatttacaattacaat 38102  T
Q  188 aattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaatttttgttaca 253  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||| |||||    
T  38103 aattagatcttagttactgaaagtgtcaacgaaataaaattttacattttttgaatttttattaca 38168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0721 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 230
Target Start/End: Complemental strand, 6975 - 6828
Alignment:
Q  85 tcaaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttg--ttttttcaaagnnnnnnnnttgttttctatcattaacaatt 182  Q
    |||| |||||||||| |||||||||||||||||| || || |||||||||||||||   |||||| ||||        ||| ||||||||||||||||||    
T  6975 tcaagaatttgagtgcaccggtacaccaaatcattaatttaatattgaaacgagtttgtttttttgaaagaaaaattattgatttctatcattaacaatt 6876  T
Q  183 acaataattagatcttagttaccgaaagtgtcgacgaaataaattttt 230  Q
    ||||||| ||||||||| ||| | ||||| |||||||||||| |||||    
T  6875 acaataactagatcttatttaacaaaagtatcgacgaaataatttttt 6828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 47960 - 47900
Alignment:
Q  87 aaaaatttgagtgtaccggtacaccaaatcatcaaattcatattgaaacgagttgtttttt 147  Q
    |||||||||||||||||||||||||||||| | ||||||| | | ||| ||||||||||||    
T  47960 aaaaatttgagtgtaccggtacaccaaatcgttaaattcacaattaaatgagttgtttttt 47900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0648 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 1371 - 1453
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  1371 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 15751 - 15833
Alignment:
Q  164 ttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaatttttacactttttgaattttt 247  Q
    |||||||||||| ||||||| |||||||| |||||| ||||| |||| ||||| ||||||||  |||||  |||||||||||||    
T  15751 ttttctatcattgacaattataataattaaatcttatttaccaaaagcgtcgatgaaataaa-atttactttttttgaattttt 15833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 3365 - 3302
Alignment:
Q  162 tgttttctatcattaacaattacaataattagatcttagttaccgaaagtgtcgacgaaataaa 225  Q
    |||||||||||||| ||||||| |||||||| ||| || ||||| |||  ||||||||||||||    
T  3365 tgttttctatcattgacaattataataattaaatcgtatttaccaaaaacgtcgacgaaataaa 3302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University