View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1297_low_122 (Length: 251)
Name: NF1297_low_122
Description: NF1297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1297_low_122 |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 19571527 - 19571287
Alignment:
| Q |
1 |
tacagataactatgatttgactcaagtttcattttttccctacatagcatgaaattaaacaaattcattggacacttgaggatcatatgttctctcatgc |
100 |
Q |
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| T |
19571527 |
tacagataactatgatttgactcaagtttcattttttccctacatagcatgaaattaaacaaattcattggacacttgaggatcatatgttctctcatgc |
19571428 |
T |
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| Q |
101 |
aacacttcagattcttacttatcactattgtatggttttaaccagaaaaacgtgcatctctgcaaacttggaatctgatttgaagttatctcttgaaaaa |
200 |
Q |
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| T |
19571427 |
aacacttcagattcttacttatcactattgtatggttttaaccagaaaaacgtgcatctctgcaaacttggaatctgatttgaagttatctcttgaaaaa |
19571328 |
T |
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| Q |
201 |
taacttgacaataatcaaattatggtgatacaggtcctatg |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
19571327 |
aaacttgacaataatcaaattatggtgatacaggtcctatg |
19571287 |
T |
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