View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1297_low_83 (Length: 296)
Name: NF1297_low_83
Description: NF1297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1297_low_83 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 2404285 - 2404129
Alignment:
| Q |
97 |
accatcttctaatttcttattgttctaacctcccatgttctacaccataaaaattctttcccatgttctaagttccataaccaagatgatcaatgacaac |
196 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
2404285 |
accatcttctaatttcttattgttctaacctcccatgttctacaccataaaaattcttttccatgttctaagttccataaccaagatgatcaatgacaac |
2404186 |
T |
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| Q |
197 |
accccattctttgaactctatctcttaaaattccattgtacaaagcaactctatttg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2404185 |
accccattctttgaactctatctcttaaaattccattgtacaaagcaactctatttg |
2404129 |
T |
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