View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1297_low_90 (Length: 282)
Name: NF1297_low_90
Description: NF1297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1297_low_90 |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 30 - 230
Target Start/End: Original strand, 7009331 - 7009531
Alignment:
| Q |
30 |
gtctgagaagattctcatgcaggtgttaccaccggttattggggtggtttctggtgcggtgttcatgatttttccgagttatcgacatggaattggatac |
129 |
Q |
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| T |
7009331 |
gtctgagaagattctcatgcaggtgttaccaccggttattggggtggtttctggtgcggtgttcatgatttttccgagttatcgacatggaattggatac |
7009430 |
T |
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| Q |
130 |
cctactagttctgatactaatgatacctcagaaaagactacataggatcccttgtgcatgtttggatatcctacaagctggttctctacaattcgttcat |
229 |
Q |
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| T |
7009431 |
cctactagttctgatactaatgatacctcagaaaagactacataggatcccttgtgcatgtttggatatcctacaagcttgttctctacaattcgttcat |
7009530 |
T |
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| Q |
230 |
a |
230 |
Q |
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| T |
7009531 |
a |
7009531 |
T |
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