View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12983_high_6 (Length: 315)
Name: NF12983_high_6
Description: NF12983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12983_high_6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 15 - 315
Target Start/End: Original strand, 45343793 - 45344093
Alignment:
| Q |
15 |
atgttgaagaagtaaagcatgacatattggtatgtgaaggcaataatgatagtgaagattccacctttgaaagtgaagaagaggttgtagaagacactga |
114 |
Q |
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| T |
45343793 |
atgttgaagaagtaaagcatgacatattggtatgtgaaggcaataatgatagtgaagattccacctttgaaagtgaagaagaggttgtagaagacactga |
45343892 |
T |
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| Q |
115 |
aacaccagctgacacagttcaagaggtagaaacaatgacctcaacatcaagtgattcatctaatgaagatccaccggtacatgctgaaggaagaattcga |
214 |
Q |
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| T |
45343893 |
aacaccagctgacacagttcaagaggtagaaacaatgacctcaacatcaagtgattcatctaatgaagatccaccggtacatgctgaaggaagaattcga |
45343992 |
T |
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| Q |
215 |
aaagcacctaactatttgcaggattatgaaagtggtgaaggattgtccgcgggtgagaactattttgcaatgtttacttctcatgaagatccaaactcat |
314 |
Q |
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| T |
45343993 |
aaagcacctaactatttgcaggattatgaaagtggtgaaggattgtccgcgggtgagaactattttgcaatgtttacttctcatgaagatccaaactcat |
45344092 |
T |
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| Q |
315 |
t |
315 |
Q |
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| T |
45344093 |
t |
45344093 |
T |
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