View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12985_high_19 (Length: 201)
Name: NF12985_high_19
Description: NF12985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12985_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 31924112 - 31924302
Alignment:
| Q |
1 |
acacattataatatcatattcttcatattctgcatagtaccatgacatgtgttgcctaattaatattattatacagtggactccacatatatgatggctc |
100 |
Q |
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||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31924112 |
acacactataatatcatattcttaatattctgcatagtaccatgacatgtgttgcctaattaatattattatacagtggactccacatatatgatggctc |
31924211 |
T |
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| Q |
101 |
acattgcagcgggtccatagacacaccctgcaacctattatggctcatattagccaatttctgnnnnnnnctttccataatttctttctaa |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
31924212 |
acattgcagcgggtccatagacacaccctgcaacctattatggctcatattagccaatttctgtttttttctttccataatttctttctaa |
31924302 |
T |
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