View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12985_low_15 (Length: 244)

Name: NF12985_low_15
Description: NF12985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12985_low_15
NF12985_low_15
[»] scaffold0337 (1 HSPs)
scaffold0337 (69-241)||(9812-9984)
[»] chr2 (28 HSPs)
chr2 (69-239)||(9241783-9241953)
chr2 (69-239)||(21073586-21073757)
chr2 (174-239)||(34136901-34136967)
chr2 (117-187)||(26896389-26896465)
chr2 (135-187)||(6478163-6478215)
chr2 (135-187)||(24274114-24274166)
chr2 (174-244)||(43947454-43947524)
chr2 (135-187)||(31518643-31518695)
chr2 (71-110)||(23062903-23062942)
chr2 (174-239)||(39828087-39828153)
chr2 (69-110)||(23264333-23264374)
chr2 (174-239)||(22252582-22252648)
chr2 (142-196)||(28348956-28349009)
chr2 (184-237)||(34492356-34492410)
chr2 (135-187)||(43708019-43708071)
chr2 (145-196)||(20591282-20591333)
chr2 (83-121)||(6261203-6261241)
chr2 (83-121)||(19662479-19662517)
chr2 (145-195)||(24504575-24504625)
chr2 (83-121)||(30644105-30644143)
chr2 (145-195)||(31503472-31503522)
chr2 (145-195)||(31506038-31506088)
chr2 (174-215)||(27485376-27485417)
chr2 (174-237)||(13101742-13101806)
chr2 (185-244)||(18547034-18547094)
chr2 (174-237)||(21914746-21914810)
chr2 (74-110)||(23089819-23089855)
chr2 (74-110)||(23102247-23102283)
[»] chr6 (32 HSPs)
chr6 (69-241)||(23838031-23838203)
chr6 (174-239)||(18453143-18453209)
chr6 (121-187)||(16133534-16133606)
chr6 (121-187)||(19444144-19444216)
chr6 (135-187)||(13751216-13751268)
chr6 (135-187)||(24441063-24441115)
chr6 (174-239)||(20078264-20078330)
chr6 (135-187)||(5110625-5110677)
chr6 (135-187)||(5289984-5290036)
chr6 (135-187)||(24266903-24266955)
chr6 (135-185)||(20182636-20182686)
chr6 (135-185)||(22153305-22153355)
chr6 (117-187)||(29848367-29848443)
chr6 (135-187)||(610878-610930)
chr6 (174-237)||(15174319-15174383)
chr6 (174-237)||(18913780-18913844)
chr6 (174-237)||(18937038-18937102)
chr6 (174-217)||(19656254-19656297)
chr6 (83-121)||(4476848-4476886)
chr6 (142-196)||(15686292-15686346)
chr6 (174-237)||(17743159-17743223)
chr6 (135-187)||(25807065-25807117)
chr6 (145-196)||(8522804-8522855)
chr6 (135-177)||(12389729-12389771)
chr6 (175-217)||(19773785-19773827)
chr6 (174-216)||(22805758-22805800)
chr6 (184-237)||(28708495-28708549)
chr6 (117-146)||(610848-610877)
chr6 (117-146)||(12389699-12389728)
chr6 (184-217)||(17743223-17743256)
chr6 (74-110)||(21565976-21566012)
chr6 (174-237)||(27573143-27573207)
[»] chr4 (30 HSPs)
chr4 (69-241)||(18212589-18212761)
chr4 (103-239)||(24047393-24047530)
chr4 (135-187)||(3337244-3337296)
chr4 (117-187)||(15448273-15448343)
chr4 (135-187)||(4615928-4615980)
chr4 (135-187)||(13446593-13446645)
chr4 (135-187)||(14942509-14942561)
chr4 (174-239)||(26045387-26045453)
chr4 (174-239)||(26050568-26050634)
chr4 (117-187)||(15990167-15990242)
chr4 (135-187)||(2585073-2585125)
chr4 (135-187)||(8710716-8710768)
chr4 (135-187)||(15344142-15344194)
chr4 (135-187)||(20899622-20899674)
chr4 (135-187)||(27027873-27027925)
chr4 (142-187)||(10704643-10704688)
chr4 (142-187)||(10918413-10918458)
chr4 (174-217)||(53631498-53631541)
chr4 (142-196)||(56115786-56115839)
chr4 (184-244)||(15791745-15791806)
chr4 (174-229)||(13592154-13592210)
chr4 (174-229)||(17048363-17048419)
chr4 (143-187)||(49548087-49548131)
chr4 (174-217)||(40619661-40619704)
chr4 (145-195)||(4170898-4170948)
chr4 (145-195)||(14698590-14698640)
chr4 (184-217)||(13592220-13592253)
chr4 (184-217)||(15497278-15497311)
chr4 (118-146)||(6511683-6511711)
chr4 (135-183)||(6511712-6511760)
[»] chr7 (52 HSPs)
chr7 (69-239)||(14421806-14421977)
chr7 (69-239)||(18607317-18607480)
chr7 (69-190)||(147522-147643)
chr7 (103-239)||(11661162-11661299)
chr7 (117-199)||(41055530-41055618)
chr7 (117-229)||(16462091-16462212)
chr7 (117-229)||(709431-709555)
chr7 (135-199)||(47975819-47975883)
chr7 (135-187)||(44190789-44190841)
chr7 (117-187)||(4325170-4325246)
chr7 (135-187)||(8757258-8757310)
chr7 (176-239)||(38519335-38519399)
chr7 (117-187)||(12755568-12755647)
chr7 (174-239)||(42461910-42461976)
chr7 (142-187)||(14416355-14416400)
chr7 (142-187)||(39431767-39431812)
chr7 (174-237)||(130913-130977)
chr7 (135-187)||(3289684-3289736)
chr7 (135-187)||(48743461-48743513)
chr7 (135-186)||(832886-832937)
chr7 (135-186)||(1198066-1198117)
chr7 (175-239)||(16996184-16996249)
chr7 (147-187)||(13894243-13894283)
chr7 (174-237)||(32301069-32301133)
chr7 (135-186)||(836929-836980)
chr7 (135-186)||(1202109-1202160)
chr7 (174-239)||(9033440-9033507)
chr7 (145-199)||(16006290-16006344)
chr7 (142-196)||(21065339-21065392)
chr7 (149-187)||(40555605-40555643)
chr7 (174-237)||(11392103-11392167)
chr7 (174-217)||(16461017-16461060)
chr7 (174-217)||(16579584-16579627)
chr7 (174-217)||(16586036-16586079)
chr7 (145-196)||(35366115-35366165)
chr7 (175-217)||(1490306-1490348)
chr7 (174-239)||(11525658-11525724)
chr7 (175-217)||(14258277-14258319)
chr7 (83-121)||(16008568-16008606)
chr7 (184-237)||(16461050-16461104)
chr7 (83-121)||(18872350-18872388)
chr7 (145-195)||(21743482-21743532)
chr7 (77-110)||(13678689-13678722)
chr7 (155-196)||(38828129-38828170)
chr7 (117-146)||(39431820-39431849)
chr7 (117-146)||(44190842-44190871)
chr7 (160-196)||(8776250-8776286)
chr7 (117-187)||(14191951-14192016)
chr7 (174-237)||(16550868-16550932)
chr7 (174-237)||(16614730-16614794)
chr7 (74-110)||(16676545-16676581)
chr7 (74-110)||(17650781-17650817)
[»] chr1 (26 HSPs)
chr1 (69-239)||(20438087-20438258)
chr1 (103-239)||(28312404-28312541)
chr1 (174-239)||(14800490-14800556)
chr1 (174-239)||(14809364-14809430)
chr1 (115-187)||(16400782-16400857)
chr1 (121-187)||(13528656-13528728)
chr1 (117-187)||(20044320-20044396)
chr1 (174-234)||(21043380-21043441)
chr1 (174-244)||(20958069-20958140)
chr1 (117-187)||(44822983-44823050)
chr1 (137-187)||(52983285-52983335)
chr1 (174-238)||(23967675-23967740)
chr1 (174-237)||(29764502-29764566)
chr1 (185-244)||(47190573-47190633)
chr1 (142-196)||(294084-294137)
chr1 (69-107)||(11157360-11157398)
chr1 (137-187)||(20044081-20044131)
chr1 (174-237)||(48520293-48520357)
chr1 (174-217)||(48520347-48520390)
chr1 (145-187)||(10813385-10813426)
chr1 (83-121)||(16372021-16372059)
chr1 (135-181)||(21181193-21181239)
chr1 (155-196)||(2333153-2333194)
chr1 (117-146)||(21181240-21181269)
chr1 (174-237)||(20316416-20316480)
chr1 (174-214)||(48603278-48603318)
[»] chr3 (45 HSPs)
chr3 (103-239)||(10834197-10834334)
chr3 (72-200)||(9533304-9533416)
chr3 (142-229)||(6805837-6805927)
chr3 (117-187)||(13026533-13026609)
chr3 (121-187)||(17548413-17548485)
chr3 (136-187)||(14818163-14818214)
chr3 (135-187)||(3394864-3394916)
chr3 (135-187)||(11850505-11850557)
chr3 (135-187)||(13520643-13520695)
chr3 (135-187)||(43928506-43928558)
chr3 (135-187)||(52338827-52338879)
chr3 (117-183)||(179573-179645)
chr3 (142-187)||(13030125-13030170)
chr3 (174-238)||(16796329-16796394)
chr3 (117-187)||(18367620-18367696)
chr3 (135-187)||(3803017-3803069)
chr3 (135-187)||(13523273-13523325)
chr3 (174-237)||(35961752-35961816)
chr3 (175-237)||(324017-324080)
chr3 (174-244)||(9577586-9577657)
chr3 (142-196)||(10989752-10989805)
chr3 (137-187)||(54520621-54520671)
chr3 (135-184)||(52213342-52213391)
chr3 (174-237)||(10542488-10542552)
chr3 (174-244)||(15245979-15246050)
chr3 (174-217)||(18700559-18700602)
chr3 (145-196)||(54973258-54973309)
chr3 (145-196)||(54975868-54975919)
chr3 (145-196)||(54978478-54978529)
chr3 (145-196)||(55292601-55292652)
chr3 (184-237)||(5841802-5841856)
chr3 (83-121)||(14763785-14763823)
chr3 (83-121)||(23371531-23371569)
chr3 (179-236)||(43889902-43889960)
chr3 (117-146)||(3394917-3394946)
chr3 (142-183)||(6819256-6819297)
chr3 (142-187)||(12275743-12275788)
chr3 (117-146)||(13031669-13031698)
chr3 (184-244)||(23318802-23318863)
chr3 (185-229)||(43889855-43889900)
chr3 (174-229)||(324070-324126)
chr3 (174-214)||(12469736-12469776)
chr3 (174-229)||(32403063-32403119)
chr3 (5-45)||(45458062-45458102)
chr3 (74-110)||(55499911-55499947)
[»] scaffold0019 (1 HSPs)
scaffold0019 (117-241)||(132821-132945)
[»] chr8 (22 HSPs)
chr8 (133-190)||(27941716-27941773)
chr8 (122-187)||(32949756-32949821)
chr8 (174-239)||(22253258-22253324)
chr8 (174-239)||(22381825-22381891)
chr8 (117-187)||(20454355-20454429)
chr8 (142-187)||(18024576-18024621)
chr8 (70-110)||(18613442-18613482)
chr8 (117-187)||(19882094-19882167)
chr8 (174-239)||(5083247-5083313)
chr8 (135-187)||(362057-362109)
chr8 (174-217)||(5760517-5760560)
chr8 (174-244)||(28397511-28397582)
chr8 (142-196)||(363837-363890)
chr8 (174-238)||(19879952-19880017)
chr8 (174-237)||(23478204-23478268)
chr8 (174-217)||(37515488-37515531)
chr8 (145-195)||(6608451-6608501)
chr8 (142-196)||(44431910-44431963)
chr8 (117-146)||(20460084-20460113)
chr8 (134-187)||(22920813-22920865)
chr8 (184-239)||(17438311-17438367)
chr8 (174-229)||(18833398-18833454)
[»] scaffold0282 (1 HSPs)
scaffold0282 (174-239)||(18261-18327)
[»] scaffold0026 (2 HSPs)
scaffold0026 (135-197)||(21160-21222)
scaffold0026 (83-121)||(110677-110715)
[»] scaffold0107 (2 HSPs)
scaffold0107 (174-244)||(36141-36212)
scaffold0107 (143-187)||(3024-3068)
[»] scaffold0453 (1 HSPs)
scaffold0453 (117-184)||(3149-3222)
[»] scaffold0108 (1 HSPs)
scaffold0108 (174-239)||(3218-3284)
[»] chr5 (19 HSPs)
chr5 (69-115)||(23112468-23112514)
chr5 (135-187)||(22470153-22470205)
chr5 (117-187)||(17812512-17812586)
chr5 (184-244)||(23469774-23469835)
chr5 (117-187)||(24277468-24277550)
chr5 (146-187)||(24384704-24384745)
chr5 (135-187)||(8952912-8952964)
chr5 (135-187)||(41876411-41876463)
chr5 (142-196)||(22758841-22758894)
chr5 (174-237)||(17010849-17010913)
chr5 (74-109)||(22439516-22439551)
chr5 (145-196)||(29325418-29325469)
chr5 (174-217)||(29447839-29447882)
chr5 (184-229)||(22107663-22107709)
chr5 (83-121)||(37598941-37598979)
chr5 (83-121)||(42960566-42960604)
chr5 (117-146)||(24384663-24384692)
chr5 (155-196)||(26361262-26361303)
chr5 (142-186)||(22357770-22357814)
[»] scaffold0117 (1 HSPs)
scaffold0117 (121-187)||(41087-41159)
[»] scaffold1427 (1 HSPs)
scaffold1427 (69-113)||(1239-1283)
[»] scaffold0151 (2 HSPs)
scaffold0151 (135-187)||(2348-2400)
scaffold0151 (135-187)||(9192-9244)
[»] scaffold0106 (2 HSPs)
scaffold0106 (135-187)||(20887-20939)
scaffold0106 (184-244)||(19734-19795)
[»] scaffold0491 (1 HSPs)
scaffold0491 (140-187)||(10620-10667)
[»] scaffold0010 (1 HSPs)
scaffold0010 (173-239)||(607-674)
[»] scaffold0074 (1 HSPs)
scaffold0074 (174-239)||(8122-8188)
[»] scaffold0012 (1 HSPs)
scaffold0012 (174-239)||(221300-221366)
[»] scaffold0139 (1 HSPs)
scaffold0139 (69-110)||(15783-15824)
[»] scaffold0070 (1 HSPs)
scaffold0070 (142-187)||(8202-8247)
[»] scaffold0007 (1 HSPs)
scaffold0007 (117-187)||(159814-159890)
[»] scaffold0956 (1 HSPs)
scaffold0956 (135-187)||(2463-2515)
[»] scaffold0825 (1 HSPs)
scaffold0825 (135-187)||(1668-1720)
[»] scaffold0293 (1 HSPs)
scaffold0293 (175-239)||(17465-17529)
[»] scaffold0273 (1 HSPs)
scaffold0273 (135-187)||(6758-6810)
[»] scaffold0607 (1 HSPs)
scaffold0607 (117-187)||(2822-2896)
[»] scaffold0396 (1 HSPs)
scaffold0396 (174-236)||(1855-1918)
[»] scaffold0429 (1 HSPs)
scaffold0429 (137-187)||(2852-2902)
[»] scaffold0011 (3 HSPs)
scaffold0011 (174-239)||(38245-38311)
scaffold0011 (179-237)||(125732-125791)
scaffold0011 (174-217)||(125781-125824)
[»] scaffold0962 (1 HSPs)
scaffold0962 (142-187)||(1391-1436)
[»] scaffold0020 (1 HSPs)
scaffold0020 (69-110)||(102714-102755)
[»] scaffold0016 (1 HSPs)
scaffold0016 (117-187)||(174688-174764)
[»] scaffold0462 (1 HSPs)
scaffold0462 (174-237)||(10345-10409)
[»] scaffold0334 (1 HSPs)
scaffold0334 (147-187)||(1252-1292)
[»] scaffold0180 (1 HSPs)
scaffold0180 (135-187)||(29213-29265)
[»] scaffold0175 (1 HSPs)
scaffold0175 (135-187)||(18015-18067)
[»] scaffold0003 (1 HSPs)
scaffold0003 (142-222)||(137824-137903)
[»] scaffold1283 (1 HSPs)
scaffold1283 (174-217)||(1492-1535)
[»] scaffold0188 (1 HSPs)
scaffold0188 (136-187)||(499-550)
[»] scaffold0046 (1 HSPs)
scaffold0046 (174-244)||(17005-17076)
[»] scaffold2046 (1 HSPs)
scaffold2046 (149-187)||(262-300)
[»] scaffold0395 (1 HSPs)
scaffold0395 (142-196)||(8678-8731)
[»] scaffold0347 (1 HSPs)
scaffold0347 (174-239)||(8851-8917)
[»] scaffold0170 (1 HSPs)
scaffold0170 (174-239)||(2917-2983)
[»] scaffold0109 (1 HSPs)
scaffold0109 (142-196)||(2388-2441)
[»] scaffold0500 (1 HSPs)
scaffold0500 (174-238)||(7511-7576)
[»] scaffold0359 (1 HSPs)
scaffold0359 (174-234)||(15416-15477)
[»] scaffold0181 (1 HSPs)
scaffold0181 (142-187)||(34266-34311)
[»] scaffold0004 (2 HSPs)
scaffold0004 (73-110)||(116088-116125)
scaffold0004 (135-187)||(205227-205279)
[»] scaffold0413 (1 HSPs)
scaffold0413 (135-187)||(10814-10866)
[»] scaffold0326 (1 HSPs)
scaffold0326 (135-187)||(234-286)
[»] scaffold0278 (1 HSPs)
scaffold0278 (173-217)||(7614-7658)
[»] scaffold0096 (2 HSPs)
scaffold0096 (174-237)||(20963-21027)
scaffold0096 (174-217)||(21017-21060)
[»] scaffold0042 (2 HSPs)
scaffold0042 (135-187)||(51096-51148)
scaffold0042 (117-146)||(51066-51095)
[»] scaffold0485 (1 HSPs)
scaffold0485 (175-237)||(10125-10188)
[»] scaffold0034 (3 HSPs)
scaffold0034 (174-217)||(117138-117181)
scaffold0034 (184-229)||(117202-117248)
scaffold0034 (184-217)||(119844-119877)
[»] scaffold1539 (1 HSPs)
scaffold1539 (174-239)||(899-965)
[»] scaffold0679 (1 HSPs)
scaffold0679 (184-237)||(2654-2708)
[»] scaffold0001 (1 HSPs)
scaffold0001 (174-239)||(497387-497453)
[»] scaffold1276 (1 HSPs)
scaffold1276 (142-187)||(298-343)
[»] scaffold0484 (1 HSPs)
scaffold0484 (184-217)||(688-721)
[»] scaffold0436 (1 HSPs)
scaffold0436 (174-238)||(7992-8057)
[»] scaffold0317 (1 HSPs)
scaffold0317 (77-110)||(582-615)
[»] scaffold0476 (1 HSPs)
scaffold0476 (74-110)||(4088-4124)
[»] scaffold0165 (2 HSPs)
scaffold0165 (174-214)||(3529-3569)
scaffold0165 (174-214)||(7593-7633)
[»] scaffold0077 (1 HSPs)
scaffold0077 (74-110)||(4406-4442)


Alignment Details
Target: scaffold0337 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 9984 - 9812
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9984 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggcaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 9885  T
Q  169 actccacaacttggtcaacatcaacaacttaagaccccaatactttggacgacatcttacatcttagaccgtc 241  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9884 actccacaacttggtcaacatcaacaacttaagactccaatactttggacgacatcttacatcttagaccgtc 9812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 9241783 - 9241953
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9241783 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggcaacatcaacgacaacgtagacaacgacgactgtgcataaataattataactt 9241882  T
Q  169 actccacaacttggtcaacatcaacaacttaagaccccaatactttggacgacatcttacatcttagaccg 239  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9241883 actccacaacttggtcaacatcaacaacttaagactccaatactttggacgacatcttacatcttagaccg 9241953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 21073757 - 21073586
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  21073757 ttggttttatacccaatcatctccaaatttactaaactcaacaacggcaacatcaacgacaacgtacacaacgacaactgtgcataaataattatgactt 21073658  T
Q  169 actccacaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  21073657 actccacaacttggtcaacatcaacaacttaagactccaatactttggaacgacatcttacatcttagaccg 21073586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 34136901 - 34136967
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  34136901 acaacttggacaacatcaacaacttaagactccaatactttggaacgacatcttacattttagaccg 34136967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 26896389 - 26896465
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||||      |||| |||||||||||| |||||||||||||||||||||||    
T  26896389 aacatcaacgacaacgtagacaacgacaacaacaactgtggataaataattatgacttactccacaacttggtcaac 26896465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 6478215 - 6478163
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  6478215 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 6478163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 24274166 - 24274114
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  24274166 gacaacgacaactgtgcataaataattatgactcactccacaacttggtcaac 24274114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 43947524 - 43947454
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttggacgacatcttacatcttagaccgtctca 244  Q
    ||||||| | |||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||| ||||    
T  43947524 acaacttagacaacatcatcaacttatgactccaatactttggacgacatctttcatcttagaccgactca 43947454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 31518643 - 31518695
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||||||    
T  31518643 gacaacaacaactgtgcataaataattatgacttactccacaaattggtcaac 31518695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 23062903 - 23062942
Alignment:
Q  71 ggtttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23062903 ggtttcatactcaatcatctccaaattcactaaactcaac 23062942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 39828153 - 39828087
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  39828153 acaacttagacaacatcaacaacttaagactccaatactttggaacgacatctttcatcttaaaccg 39828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 23264333 - 23264374
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaac 110  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  23264333 ttggtttcatactcgatcatctccaaattcactaaactcaac 23264374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 22252648 - 22252582
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||| ||||| |||||||||||| ||||    
T  22252648 acaacttggacaacatcaacaacttaggactccaacactttggaacgacctcttacatcttaaaccg 22252582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 28348956 - 28349009
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  28348956 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 28349009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 34492410 - 34492356
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  34492410 caacatcaacaacttaagactccaatactttggaacgacaacttacaacttagac 34492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 43708071 - 43708019
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||| ||| ||||||||||||| ||||||| |||||||||||||||    
T  43708071 gacaacaacaattgtacataaataattatgacttactacacaacttggtcaac 43708019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 20591333 - 20591282
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||  | |||| ||||||||| ||||||||||||||||||||||    
T  20591333 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaac 20591282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 6261241 - 6261203
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  6261241 aatcatctccagattcactaaactcaacaacggcaacat 6261203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 19662517 - 19662479
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  19662517 aatcatctccagattcactaaactcaacaacggcaacat 19662479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 24504575 - 24504625
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaa 195  Q
    |||||||||||  | |||| ||||||||| |||||||||||||||||||||    
T  24504575 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaa 24504625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 30644143 - 30644105
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  30644143 aatcatctccatattcactaaactcaacaacggcaacat 30644105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 31503472 - 31503522
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaa 195  Q
    |||||||||||  | |||| ||||||||| |||||||||||||||||||||    
T  31503472 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaa 31503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 31506038 - 31506088
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaa 195  Q
    |||||||||||  | |||| ||||||||| |||||||||||||||||||||    
T  31506038 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaa 31506088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 27485417 - 27485376
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttg 215  Q
    ||||||| | |||||| |||||||||||||||||||||||||    
T  27485417 acaacttagacaacattaacaacttaagaccccaatactttg 27485376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 13101806 - 13101742
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||| | ||||||| |||||||||||| |||||| |||||| |||||||    
T  13101806 acaacttagacaacatcaaccatttaagactccaatactttggaacgacaacttacaacttagac 13101742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 18547094 - 18547034
Alignment:
Q  185 aacatcaacaacttaagaccccaatactttgga-cgacatcttacatcttagaccgtctca 244  Q
    ||||||| ||||||| ||| |||||||||||||  ||||||||||||| ||||||| ||||    
T  18547094 aacatcatcaacttaggactccaatactttggattgacatcttacatcatagaccgactca 18547034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 21914746 - 21914810
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||| | ||||||||||| |||||||||||| |||||| |||||| |||||||    
T  21914746 acaacttagacaacattagcaacttaagactccaatactttggaacgacaacttacaacttagac 21914810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 23089855 - 23089819
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  23089855 ttcatactcaatcatctcccaatttactaaactcaac 23089819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 23102283 - 23102247
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  23102283 ttcatactcaatcatctcccaatttactaaactcaac 23102247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 23838031 - 23838203
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23838031 ttggtttcatactcaatcatctccaaattcactagactcaacaacggcaacatcaacgacaacgtagacaacgacgactgtgcataaataattataactt 23838130  T
Q  169 actccacaacttggtcaacatcaacaacttaagaccccaatactttggacgacatcttacatcttagaccgtc 241  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23838131 actccacaacttggtcaacatcaacaacttaagactccaatactttggacgacatcttacatcttagaccgtc 23838203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 18453143 - 18453209
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttg-gacgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  18453143 acaacttggacaacatcaacaacttaagactccaatactttgaaacgacatcttacatcttagaccg 18453209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 16133606 - 16133534
Alignment:
Q  121 tcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||      ||||||||||||||||| |||||||||||||||||||||||    
T  16133606 tcaacgacaacgtagacaacgacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 16133534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 19444216 - 19444144
Alignment:
Q  121 tcaacgacaacgtagacaacg------acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||      |||||||||||||||||||||| |||||||||||||||||||||||    
T  19444216 tcaacgacaacgtagacaacggtaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 19444144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 13751268 - 13751216
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  13751268 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 13751216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 24441063 - 24441115
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  24441063 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 24441115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 20078330 - 20078264
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||| | |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  20078330 acaacttagacaacatcaacaacttaagactccagtactttggaacgacatcttacatcttagaccg 20078264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 5110677 - 5110625
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  5110677 gacaacaacaactgtgcataaataaatatgacttactccacaacttggtcaac 5110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 5290036 - 5289984
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  5290036 gacaacaacaactgtgcataaataaatatgacttactccacaacttggtcaac 5289984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 24266903 - 24266955
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  24266903 gacaacaacaactgtgcataaataattatgacttgctccacaacttggtcaac 24266955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 20182636 - 20182686
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtca 185  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  20182636 gacaacgacaattgtgcataattaattatgacttactccacaacttggtca 20182686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 22153355 - 22153305
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtca 185  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  22153355 gacaacgacaattgtgcataattaattatgacttactccacaacttggtca 22153305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 29848443 - 29848367
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||| ||||||||||||| |||||      ||||||||||||||||| |||||||||| ||||||||||||    
T  29848443 aacatcaacggcaacgtagacaaccacaacaacgactgtgcataaataattatgacttactccataacttggtcaac 29848367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 610878 - 610930
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||  || ||||||||||||||||||||    
T  610878 gacaacaacaactgtgcataaataattacgacgtactccacaacttggtcaac 610930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 15174383 - 15174319
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  15174383 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagac 15174319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 18913780 - 18913844
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  18913780 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagac 18913844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 18937038 - 18937102
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  18937038 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagac 18937102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 19656297 - 19656254
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  19656297 acaacttggacaacatcaacaacttaagactccaatactttgga 19656254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 4476848 - 4476886
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  4476848 aatcatctccaaattcactaaactcaacaacggcaacat 4476886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 15686346 - 15686292
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    ||||||||||||||  | |||| ||||||||| ||||||||||||||||||||||    
T  15686346 acaactgtgcataataacttatgacttactccccaacttggtcaacatcaacaac 15686292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 17743159 - 17743223
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| |||||| |||| | |||||||    
T  17743159 acaacttggacaacatcgacaacttaagactccaatactttggaacgacaacttaaaacttagac 17743223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 25807065 - 25807117
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| ||| |||| ||||||||||||| ||||||||||||| |||||||||    
T  25807065 gacaacaacatctgttcataaataattatgacttactccacaatttggtcaac 25807117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 8522804 - 8522855
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||  | |||| ||||||||| ||||||||||||||||||||||    
T  8522804 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaac 8522855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 12389729 - 12389771
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaa 177  Q
    |||||| || ||||||||||||||||||| |||||||||||||    
T  12389729 gacaacaacgactgtgcataaataattatgacttactccacaa 12389771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 19773827 - 19773785
Alignment:
Q  175 caacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    |||||| | |||||||||||||||||||| |||||||||||||    
T  19773827 caacttagacaacatcaacaacttaagactccaatactttgga 19773785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 22805758 - 22805800
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg 216  Q
    ||||||| | |||||||||||||||||||| ||||||||||||    
T  22805758 acaacttagacaacatcaacaacttaagactccaatactttgg 22805800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 28708495 - 28708549
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    |||||||||||||||||| | |||||||||||| |||||| |||||| |||||||    
T  28708495 caacatcaacaacttaaggctccaatactttggaacgacaacttacaacttagac 28708549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 610848 - 610877
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  610848 aacatcaacgacaacgtagacaacgacaac 610877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 12389699 - 12389728
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  12389699 aacatcaacgacaacgtagacaacgacaac 12389728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 17743223 - 17743256
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgga 217  Q
    |||||||||||||||||||| |||||||||||||    
T  17743223 caacatcaacaacttaagactccaatactttgga 17743256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 21566012 - 21565976
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  21566012 ttcatactcaatcatctcccaatttactaaactcaac 21565976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 27573207 - 27573143
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| | |||||||||| |||||| || ||| |||||||    
T  27573207 acaacttagacaacatcaacaacttaagactcaaatactttggaacgacagctcacaacttagac 27573143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 18212589 - 18212761
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18212589 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggcaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 18212688  T
Q  169 actccacaacttggtcaacatcaacaacttaagaccccaatactttggacgacatcttacatcttagaccgtc 241  Q
    | |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18212689 attccacaacttggtcaacatcgacaacttaagactccaatactttggacgacatcttacatcttagaccgtc 18212761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 24047530 - 24047393
Alignment:
Q  103 aactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaacatcaacaacttaaga 202  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24047530 aactcaacaacgacaacatcaacgacaacgtagacagcgacaactgtgcataaataattatgacttactccacaacttggtcaacatcaacaacttaaga 24047431  T
Q  203 ccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    | |||||||||||| |||| ||||||||||||||||||    
T  24047430 ctccaatactttggaacgaaatcttacatcttagaccg 24047393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 3337244 - 3337296
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3337244 gacaacgacaactgtgcataaataattatgacttactccacaacttggtcaac 3337296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 15448343 - 15448273
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||    ||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  15448343 aacatcaacgacaacaacaacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 15448273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 4615980 - 4615928
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  4615980 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 4615928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 13446593 - 13446645
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  13446593 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 13446645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 14942561 - 14942509
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  14942561 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 14942509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 26045453 - 26045387
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||    
T  26045453 acaacttggacaacatcaacaacttaggactccaacactttggaacgacatcttacatcttagaccg 26045387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 26050634 - 26050568
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||    
T  26050634 acaacttggacaacatcaacaacttaggactccaacactttggaacgacatcttacatcttagaccg 26050568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 15990167 - 15990242
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||||      ||||||||| ||||||| |||||||||||||||||||||||    
T  15990167 aacatcaacgacaacgtagacaacgacaacaacaactgtgcataa-taattatgacttactccacaacttggtcaac 15990242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 2585125 - 2585073
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  2585125 gacaacaacaactgtgcataaataaatatgacttactccacaacttggtcaac 2585073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 8710716 - 8710768
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||||||    
T  8710716 gacaacaacatctgtgcataaataattatgacttactccacaacttggtcaac 8710768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 15344142 - 15344194
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  15344142 gacaacaacaattgtgcataaataattatgacttactccacaacttggtcaac 15344194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 20899674 - 20899622
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  20899674 gacaacaacaactgtgcataaataattatgacttgctccacaacttggtcaac 20899622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 27027873 - 27027925
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  27027873 gacaacaacaactgtgcataaataattatgtcttactccacaacttggtcaac 27027925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 10704643 - 10704688
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||    
T  10704643 acaactatgcataaataattatgacttactccacaacttggtcaac 10704688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 10918413 - 10918458
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||    
T  10918413 acaactatgcataaataattatgacttactccacaacttggtcaac 10918458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 53631541 - 53631498
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  53631541 acaacttggacaacatcaacaacttaagactccaatactttgga 53631498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 56115839 - 56115786
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  56115839 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 56115786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 15791745 - 15791806
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttg-gacgacatcttacatcttagaccgtctca 244  Q
    |||||||||||||||||||| |||||||||||  || ||||||| |||||||||||| ||||    
T  15791745 caacatcaacaacttaagactccaatactttgaaacaacatctttcatcttagaccgactca 15791806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 13592210 - 13592154
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttaca 229  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  13592210 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 13592154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 17048419 - 17048363
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttaca 229  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  17048419 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttaca 17048363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 49548131 - 49548087
Alignment:
Q  143 caactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||    
T  49548131 caactgtgcataaataaatatgacttactccacaaattggtcaac 49548087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 40619661 - 40619704
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  40619661 acaacttagacaacatcaacaacttaagactccaatactttgga 40619704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 4170898 - 4170948
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaa 195  Q
    |||||||||||  | |||| ||||||||| |||||||||||||||||||||    
T  4170898 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaa 4170948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 14698590 - 14698640
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaa 195  Q
    |||||||||||  | |||| ||||||||| |||||||||||||||||||||    
T  14698590 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaa 14698640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 13592253 - 13592220
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgga 217  Q
    |||||||||||||||||||| |||||||||||||    
T  13592253 caacatcaacaacttaagactccaatactttgga 13592220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 15497311 - 15497278
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgga 217  Q
    |||||||||||||||||||| |||||||||||||    
T  15497311 caacatcaacaacttaagactccaatactttgga 15497278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 146
Target Start/End: Original strand, 6511683 - 6511711
Alignment:
Q  118 acatcaacgacaacgtagacaacgacaac 146  Q
    |||||||||||||||||||||||||||||    
T  6511683 acatcaacgacaacgtagacaacgacaac 6511711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 6511712 - 6511760
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggt 183  Q
    |||||| |||||||||||||||||||||| |||| ||||| || |||||    
T  6511712 gacaacaacaactgtgcataaataattatgacttgctccaaaatttggt 6511760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 8e-76; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 14421806 - 14421977
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14421806 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggcaacatcaacgacaacgtagacaacgacaactgtgcataaataattatgactt 14421905  T
Q  169 actccacaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||| ||||    
T  14421906 actccacaacttggtcaacatcaacaacttaaggctccaatactttggaacgacatcttacatcttaaaccg 14421977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 18607317 - 18607480
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18607317 ttggtttcatactcaatcatctccaa-ttcactaaactcaacaacggcaacatcaacgacaacgtagacaacgacgactgtgcataaataattataactt 18607415  T
Q  169 actccacaacttggtcaacatcaacaacttaagaccccaatactttggacgacatcttacatcttagaccg 239  Q
    ||||||||||||||      ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18607416 actccacaacttgg------tcaacaacttaagactccaatactttggacgacatcttacatcttagaccg 18607480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 147522 - 147643
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  147522 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggcaacatcaacgacaacgtagacgacgacgactgtgcataaataattataactt 147621  T
Q  169 actccacaacttggtcaacatc 190  Q
    ||||||||||||||||||||||    
T  147622 actccacaacttggtcaacatc 147643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 11661162 - 11661299
Alignment:
Q  103 aactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaacatcaacaacttaaga 202  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  11661162 aactcaacaacggcaacatcaacgacaacgtagacaacgacaactgtgcataaataactatgacttactccacaacttggtcaacatcaacaacttaaga 11661261  T
Q  203 ccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    | |||||||||||| || ||||||||||||||| ||||    
T  11661262 ctccaatactttggaacaacatcttacatcttataccg 11661299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 41055530 - 41055618
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaa------ctgtgcataaataattataacttactccacaacttggtcaacatcaacaactta 199  Q
    |||||||||||||||||||||||||||||      |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41055530 aacatcaacgacaacgtagacaacgacaacaacaactgtgcataaataattatgacttactccacaacttggtcaacatcaacaactta 41055618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 16462091 - 16462212
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaa------ctgtgcataaataattataacttactccacaacttggtcaacatcaacaact--taagaccccaa 208  Q
    |||||||||||||||||||||||||||||      |||||||||||||||||| |||||||||||||||||||||| ||||||||||  || ||| ||||    
T  16462091 aacatcaacgacaacgtagacaacgacaacaacaactgtgcataaataattatgacttactccacaacttggtcaatatcaacaacttatatgactccaa 16462190  T
Q  209 tactttgg-acgacatcttaca 229  Q
    |||||||| || ||||||||||    
T  16462191 tactttggaacaacatcttaca 16462212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 709555 - 709431
Alignment:
Q  117 aacatcaacgacaacgtagacaacga---------caactgtgcataaataattataacttactccacaacttggtcaacatcaacaact--taagaccc 205  Q
    ||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || ||| |    
T  709555 aacatcaacgacaacgtagacaacgacaacaacaacaactgtgcataaataattatgacttactccacaacttggtcaacatcaacaacttatatgactc 709456  T
Q  206 caatactttgg-acgacatcttaca 229  Q
    ||||||||||| || ||||||||||    
T  709455 caatactttggaacaacatcttaca 709431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 47975883 - 47975819
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaacatcaacaactta 199  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47975883 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaacatcaacaactta 47975819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 44190841 - 44190789
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44190841 gacaacgacaactgtgcataaataattatgacttactccacaacttggtcaac 44190789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 4325170 - 4325246
Alignment:
Q  117 aacatcaacgacaacgta------gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||      ||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  4325170 aacatcaacgacaacgtatacaacgacaacgacaactgtgcattaataattatgacttactccacaacttggtcaac 4325246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 8757310 - 8757258
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  8757310 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 8757258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 38519335 - 38519399
Alignment:
Q  176 aacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  38519335 aacttggacaacatcaacaacttaagactccaatactttggaacgacatcttacatctcagaccg 38519399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 12755647 - 12755568
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaa---------ctgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||||||||||||||    
T  12755647 aacatcaacgacaacgtagacaacgacaatgacaacaactgtgcataaataattatgacttactccacaacttggtcaac 12755568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 42461910 - 42461976
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    |||||||||  ||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  42461910 acaacttggataacatcaacaacttaagactccaatacattggaacgacatcttacatcttagaccg 42461976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 14416400 - 14416355
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  14416400 acaactgtgcataaataattatgacttactccacaacttggtcaac 14416355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 39431812 - 39431767
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  39431812 acaactgtgcataaataattatgacttactccacaacttggtcaac 39431767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 130977 - 130913
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||    
T  130977 acaacttggacaacatcaacaacttaggactccaacactttggaacgacatcttacatcttagac 130913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 3289736 - 3289684
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  3289736 gacaacaacaactgtgcataaataaatatgacttactccacaacttggtcaac 3289684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 48743461 - 48743513
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  48743461 gacaacgacatctgtgcataaatagttatgacttactccacaacttggtcaac 48743513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 832937 - 832886
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaa 186  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||||||    
T  832937 gacaacaacaactgtgcataaataaatatgacttactccacaacttggtcaa 832886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 1198117 - 1198066
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaa 186  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||||||    
T  1198117 gacaacaacaactgtgcataaataaatatgacttactccacaacttggtcaa 1198066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 16996184 - 16996249
Alignment:
Q  175 caacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    |||||||| |||||||||||||||| ||| |||| ||||||| |||||||||| ||||||||||||    
T  16996184 caacttggacaacatcaacaacttaggactccaacactttggaacgacatcttgcatcttagaccg 16996249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 13894243 - 13894283
Alignment:
Q  147 tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  13894243 tgtgcataaataattatgacttactccacaacttggtcaac 13894283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 32301069 - 32301133
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||| ||| |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  32301069 acaacctggacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagac 32301133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 836980 - 836929
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaa 186  Q
    |||||| | |||||||||||||||| ||| ||||||||||||||||||||||    
T  836980 gacaacaataactgtgcataaataaatatgacttactccacaacttggtcaa 836929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 1202160 - 1202109
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaa 186  Q
    |||||| | |||||||||||||||| ||| ||||||||||||||||||||||    
T  1202160 gacaacaataactgtgcataaataaatatgacttactccacaacttggtcaa 1202109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 9033507 - 9033440
Alignment:
Q  174 acaacttggtcaacatcaa-caacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||| | ||||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  9033507 acaacttagacaacatcaaacaacttaagactccaatactttggaacgacatctttcatcttagaccg 9033440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 16006290 - 16006344
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaactta 199  Q
    |||||||||||  | |||| ||||||||| |||||||||||||||||||||||||    
T  16006290 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaactta 16006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 21065392 - 21065339
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  21065392 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 21065339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 40555643 - 40555605
Alignment:
Q  149 tgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40555643 tgcataaataattatgacttactccacaacttggtcaac 40555605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 11392167 - 11392103
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||| | |||||||||||| |||||| |||||| |||||||    
T  11392167 acaacttagacaacatcaacaacttaaggctccaatactttggaacgacaacttacaacttagac 11392103  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 16461060 - 16461017
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  16461060 acaacttagacaacatcaacaacttaagactccaatactttgga 16461017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 16579584 - 16579627
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  16579584 acaacttagacaacatcaacaacttaagactccaatactttgga 16579627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 16586079 - 16586036
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  16586079 acaacttagacaacatcaacaacttaagactccaatactttgga 16586036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 35366115 - 35366165
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    ||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  35366115 actgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 35366165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 1490348 - 1490306
Alignment:
Q  175 caacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    |||||| | |||||||||||||||||||| |||||||||||||    
T  1490348 caacttagacaacatcaacaacttaagactccaatactttgga 1490306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 11525724 - 11525658
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||| ||| |||  ||||||| || ||||||||||||||| ||||    
T  11525724 acaacttggacaacatcaacaacttaggactccagcactttggaacaacatcttacatcttaaaccg 11525658  T

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Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 14258277 - 14258319
Alignment:
Q  175 caacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    |||||| | |||||||||||||||||||| |||||||||||||    
T  14258277 caacttagacaacatcaacaacttaagactccaatactttgga 14258319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 16008568 - 16008606
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  16008568 aatcatctccagattcactaaactcaacaacggcaacat 16008606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 16461104 - 16461050
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| |||||||||||| |||||||||||| |||||| |||||| |||||||    
T  16461104 caacatcgacaacttaagactccaatactttggaacgacaacttacaacttagac 16461050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 18872350 - 18872388
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  18872350 aatcatctccagattcactaaactcaacaacggcaacat 18872388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 21743532 - 21743482
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaa 195  Q
    |||||||||||  | |||| ||||||||| |||||||||||||||||||||    
T  21743532 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaa 21743482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 13678689 - 13678722
Alignment:
Q  77 atactcaatcatctccaaattcactaaactcaac 110  Q
    |||||||||||||| |||||||||||||||||||    
T  13678689 atactcaatcatcttcaaattcactaaactcaac 13678722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 38828129 - 38828170
Alignment:
Q  155 aataattataacttactccacaacttggtcaacatcaacaac 196  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||    
T  38828129 aataactatgacttactccccaacttggtcaacatcaacaac 38828170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 39431849 - 39431820
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  39431849 aacatcaacgacaacgtagacaacgacaac 39431820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 44190871 - 44190842
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  44190871 aacatcaacgacaacgtagacaacgacaac 44190842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 8776250 - 8776286
Alignment:
Q  160 ttataacttactccacaacttggtcaacatcaacaac 196  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  8776250 ttatgacttactccccaacttggtcaacatcaacaac 8776286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 14192016 - 14191951
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||   |||| || ||||||||||||||||||| |||||| |||||||||| |||||    
T  14192016 aacatcaacgacaacgt---caac-acgactgtgcataaataattatgacttac-ccacaacttgttcaac 14191951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 16550932 - 16550868
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | ||||||||||| |||||||| |||||||||||| | |||| |||||| |||||||    
T  16550932 acaacttagacaacatcaacaccttaagactccaatactttggaatgacaacttacaacttagac 16550868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 16614730 - 16614794
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | ||||||||||| |||||||| |||||||||||| | |||| |||||| |||||||    
T  16614730 acaacttagacaacatcaacaccttaagactccaatactttggaatgacaacttacaacttagac 16614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 16676545 - 16676581
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaac 110  Q
    |||| |||||||||||||| |||||||||||||||||    
T  16676545 ttcacactcaatcatctcccaattcactaaactcaac 16676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 17650781 - 17650817
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaac 110  Q
    |||| |||||||||||||| |||||||||||||||||    
T  17650781 ttcacactcaatcatctcccaattcactaaactcaac 17650817  T

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Target: chr1 (Bit Score: 136; Significance: 5e-71; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 20438258 - 20438087
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataactt 168  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  20438258 ttggtttcatactcaatcatctccaaattcactaaactccacaacggcaacatcaacgacaacgtagacaacgataactgtgcataaataattatgactt 20438159  T
Q  169 actccacaacttggtcaacatcaacaacttaagaccccaatacttt-ggacgacatcttacatcttagaccg 239  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  20438158 actccacaacttggtcaacatcaacaactgaagactccaatactttgggacgacatcttacatcttaaaccg 20438087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 28312404 - 28312541
Alignment:
Q  103 aactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaacatcaacaacttaaga 202  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28312404 aactcaacaacgacaacatcaacgacaacgtagacaacgacaactgtgcataaataattatgacttactccacaacttggtcaacatcaacaacttaaga 28312503  T
Q  203 ccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    | |||||||||||| |||||||||||||||||||||||    
T  28312504 ctccaatactttggaacgacatcttacatcttagaccg 28312541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 14800490 - 14800556
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  14800490 acaacttggacaacatcaacaacttaagactccaatactttggaacgacatcttacatcttagaccg 14800556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 14809364 - 14809430
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  14809364 acaacttggacaacatcaacaacttaagactccaatactttggaacgacatcttacatcttagaccg 14809430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 16400782 - 16400857
Alignment:
Q  115 gaaacatcaacgacaacgtagacaacgacaac---tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||| |||||||||||||||||||||   ||||||||||||||||| ||||||| |||||||||||||||    
T  16400782 gaaacatcaatgacaacgtagacaacgacaacgactgtgcataaataattatgacttacttcacaacttggtcaac 16400857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 13528728 - 13528656
Alignment:
Q  121 tcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||      ||||||||||||||||| |||||||||||||||||||||||    
T  13528728 tcaacgacaacgtagacaacgacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 13528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 20044320 - 20044396
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaa------ctgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||| ||||||||||||||      |||||||||||||||||| |||||||||||||||||||||||    
T  20044320 aacatcaacgacaaggtagacaacgacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 20044396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 21043441 - 21043380
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatctta 234  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  21043441 acaacttggacaacatcaacaacttaagactccaatactttggaacgacatcttacatctta 21043380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 20958069 - 20958140
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||| ||||    
T  20958069 acaacttggacaacatcaacaacttaagactccaatactttggaacgaaatcttacaacttagaccgactca 20958140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 44823050 - 44822983
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||   ||||| |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  44823050 aacatcaacgacaacg---acaacaacaattgtgcataaataactatgacttactccacaacttggtcaac 44822983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 52983285 - 52983335
Alignment:
Q  137 caacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  52983285 caacaacaactgtgcaaaaataattatgacttactccacaacttggtcaac 52983335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 23967675 - 23967740
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagacc 238  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| |||||| |||||| ||||||||    
T  23967675 acaacttggacaacatcgacaacttaagactccaatactttggaacgacaacttacaacttagacc 23967740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 29764566 - 29764502
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  29764566 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagac 29764502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 47190573 - 47190633
Alignment:
Q  185 aacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    ||||||||||||||||||| |||||||||||| || ||||||| |||||||||||| ||||    
T  47190573 aacatcaacaacttaagactccaatactttggaacaacatctttcatcttagaccggctca 47190633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 294084 - 294137
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  294084 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 294137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 11157360 - 11157398
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactc 107  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  11157360 ttggtttcatactcaatcatcttcaaattcactaaactc 11157398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 20044081 - 20044131
Alignment:
Q  137 caacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||| |||||||||||||| ||||||| || ||||||||||||||||||||    
T  20044081 caacaacaactgtgcataagtaattatgacctactccacaacttggtcaac 20044131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 48520293 - 48520357
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| ||| || |||||| |||||||    
T  48520293 acaacttggacaacatcgacaacttaagactccaatactttggaacggcaacttacaacttagac 48520357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 48520347 - 48520390
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  48520347 acaacttagacaacatcaacaacttaagactccaatactttgga 48520390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 10813426 - 10813385
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  10813426 actgtgcataaataattatgacttac-ccacaacttggtcaac 10813385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 16372021 - 16372059
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  16372021 aatcatctccagattcactaaactcaacaacggcaacat 16372059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 21181239 - 21181193
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttg 181  Q
    |||||| || ||| ||||||||||||||| |||||||||||||||||    
T  21181239 gacaacaacgactatgcataaataattatgacttactccacaacttg 21181193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 2333194 - 2333153
Alignment:
Q  155 aataattataacttactccacaacttggtcaacatcaacaac 196  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||    
T  2333194 aataactatgacttactccccaacttggtcaacatcaacaac 2333153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 21181269 - 21181240
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  21181269 aacatcaacgacaacgtagacaacgacaac 21181240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 20316416 - 20316480
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||||| ||||||| |||||||||||| | |||||||||| |||||| || ||| |||||||    
T  20316416 acaacttggacaacatcgacaacttaagactctaatactttggaacgacaactcacaacttagac 20316480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 48603278 - 48603318
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt 214  Q
    ||||||| | |||||||||||||||||||| ||||||||||    
T  48603278 acaacttagacaacatcaacaacttaagactccaatacttt 48603318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 10834334 - 10834197
Alignment:
Q  103 aactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaacatcaacaacttaaga 202  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  10834334 aactcaacaacggcaacatcaacgacaacgtagacaacgacaactgtgcataaataattatgacttactccacaacttggtcgacatcaacaacttaaga 10834235  T
Q  203 ccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    | |||||||||||| |||||||||||||||||||||||    
T  10834234 ctccaatactttggaacgacatcttacatcttagaccg 10834197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 9533304 - 9533416
Alignment:
Q  72 gtttcatactcaatcatctccaaattcactaaactcaacaacggaaacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttact 171  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||                |||||| | |||||||    
T  9533304 gtttcatactcaatcatctccaaattcactaaactcaacaacggcaacatcaacgacaacgtagacaa----------------ataattgtgacttact 9533387  T
Q  172 ccacaacttggtcaacatcaacaacttaa 200  Q
    |||||||||||||||||||||||||||||    
T  9533388 ccacaacttggtcaacatcaacaacttaa 9533416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 6805927 - 6805837
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaact--taagaccccaatactttgg-acgacatcttaca 229  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  || ||| |||||||||||| || ||||||||||    
T  6805927 acaactatgcataaataattatgacttactccacaacttggtcaacatcaacaacttatatgactccaatactttggaacaacatcttaca 6805837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 13026609 - 13026533
Alignment:
Q  117 aacatcaacgacaacgtagacaacga------caactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||      ||||||||||||||||||||| |||||||||||||||||||||||    
T  13026609 aacatcaacgacaacgtagacaacgataacaacaactgtgcataaataattatgacttactccacaacttggtcaac 13026533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 17548485 - 17548413
Alignment:
Q  121 tcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||      ||||||||||||||||| |||||||||||||||||||||||    
T  17548485 tcaacgacaacgtagacaacgacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 17548413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 14818163 - 14818214
Alignment:
Q  136 acaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  14818163 acaacgacaactgtgcataaataattatgacttactccataacttggtcaac 14818214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 3394916 - 3394864
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| | |||||||||||||||||||||    
T  3394916 gacaacaacaactgtgcataaataattatgatttactccacaacttggtcaac 3394864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 11850557 - 11850505
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  11850557 gacaacaacaactgtgcataaataaatatgacttactccacaacttggtcaac 11850505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 13520695 - 13520643
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  13520695 gacaacaaccactgtgcataaataattatgacttactccacaacttggtcaac 13520643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 43928506 - 43928558
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  43928506 gacaacgacatatgtgcataaataattatgacttactccacaacttggtcaac 43928558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 52338879 - 52338827
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  52338879 gacaacaacaactgtgcataaataattatgacttgctccacaacttggtcaac 52338827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 179645 - 179573
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggt 183  Q
    ||||||||||||||| ||||||||||||||      | ||||||||||||||| |||||||||||||||||||    
T  179645 aacatcaacgacaacatagacaacgacaacaacaactttgcataaataattatgacttactccacaacttggt 179573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 13030170 - 13030125
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  13030170 acaactgtgcataaataattatgacttacttcacaacttggtcaac 13030125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 16796329 - 16796394
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagacc 238  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||    
T  16796329 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagacc 16796394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 18367696 - 18367620
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||||      ||||  ||||||||||| ||||||||||||||||| |||||    
T  18367696 aacatcaacgacaacgtagacaacgacaacaacaattgtgtgtaaataattatgacttactccacaacttgatcaac 18367620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 3803017 - 3803069
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| |||||||||    
T  3803017 gacaacaacaactgtgcataaataaatatgacttactccacaaattggtcaac 3803069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 13523325 - 13523273
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| || ||||||||||||||||||| ||||||| |||||||||||||||    
T  13523325 gacaacaaccactgtgcataaataattatgacttactgcacaacttggtcaac 13523273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 35961816 - 35961752
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  35961816 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagac 35961752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 324017 - 324080
Alignment:
Q  175 caacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    |||||||| ||||||| |||||||||||| |||||||||||| |||||| |||||| |||||||    
T  324017 caacttggacaacatcgacaacttaagactccaatactttggaacgacaacttacaacttagac 324080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 9577586 - 9577657
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    ||||||| | |||||||||||||||||||| |||| ||||||| ||||| ||||||||| ||||||| ||||    
T  9577586 acaacttagacaacatcaacaacttaagactccaacactttggaacgacttcttacatcatagaccgactca 9577657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 10989805 - 10989752
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  10989805 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 10989752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 54520621 - 54520671
Alignment:
Q  137 caacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||| |||||||||||||||||| ||| ||||||||||||| |||||||||    
T  54520621 caacaacaactgtgcataaataaatatgacttactccacaaattggtcaac 54520671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 52213391 - 52213342
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtc 184  Q
    |||||| |||| ||||||||||||||||| ||||||||||||| ||||||    
T  52213391 gacaacaacaattgtgcataaataattatgacttactccacaatttggtc 52213342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 10542552 - 10542488
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| ||| |||||||| |||||| |||||| |||||||    
T  10542552 acaacttagacaacatcaacaacttaagactccagtactttggaacgacaacttacaacttagac 10542488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 15245979 - 15246050
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    ||||||| | |||||||| ||||||| ||| |||||||||||| |||||| ||| |||||||||||| ||||    
T  15245979 acaacttagacaacatcatcaacttaggactccaatactttggaacgacaactttcatcttagaccgactca 15246050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 18700602 - 18700559
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  18700602 acaacttagacaacatcaacaacttaagactccaatactttgga 18700559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 54973258 - 54973309
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||  | |||| ||||||||| ||||||||||||||||||||||    
T  54973258 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaac 54973309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 54975868 - 54975919
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||  | |||| ||||||||| ||||||||||||||||||||||    
T  54975868 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaac 54975919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 54978478 - 54978529
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||  | |||| ||||||||| ||||||||||||||||||||||    
T  54978478 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaac 54978529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 55292652 - 55292601
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||  | |||| ||||||||| ||||||||||||||||||||||    
T  55292652 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaac 55292601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 5841802 - 5841856
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    |||||||||||||||||| | |||||||||||| |||||| |||||| |||||||    
T  5841802 caacatcaacaacttaaggctccaatactttggaacgacaacttacaacttagac 5841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 14763823 - 14763785
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  14763823 aatcatctccagattcactaaactcaacaacggcaacat 14763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 23371569 - 23371531
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  23371569 aatcatctccagattcactaaactcaacaacggcaacat 23371531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 43889960 - 43889902
Alignment:
Q  179 ttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttaga 236  Q
    |||| ||||||| |||||||||||| |||||||||||| |||||| |||||| ||||||    
T  43889960 ttggacaacatcgacaacttaagactccaatactttggaacgacaacttacaacttaga 43889902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 3394946 - 3394917
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  3394946 aacatcaacgacaacgtagacaacgacaac 3394917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 6819256 - 6819297
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggt 183  Q
    |||| ||||||||||||||||| ||||||| |||||||||||    
T  6819256 acaattgtgcataaataattatgacttacttcacaacttggt 6819297  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 12275743 - 12275788
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| ||||||||||||||| |||||||||| ||||| ||||||    
T  12275743 acaactttgcataaataattatgacttactccaaaactttgtcaac 12275788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 13031698 - 13031669
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  13031698 aacatcaacgacaacgtagacaacgacaac 13031669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 23318863 - 23318802
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    |||||||| ||||||| ||| |||||||||||| |||||||| | |||||||||||| ||||    
T  23318863 caacatcatcaacttaggactccaatactttggaacgacatcattcatcttagaccgactca 23318802  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 43889900 - 43889855
Alignment:
Q  185 aacatcaacaacttaagaccccaatactttgg-acgacatcttaca 229  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||    
T  43889900 aacatcaacaacttaagactccaatactttggaacgacaacttaca 43889855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 324070 - 324126
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttaca 229  Q
    ||||||| | ||||||| |||||||||||| |||||||||||| |||||| ||||||    
T  324070 acaacttagacaacatcgacaacttaagactccaatactttggaacgacaacttaca 324126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 12469736 - 12469776
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt 214  Q
    ||||||| | |||||||||||||||||||| ||||||||||    
T  12469736 acaacttagacaacatcaacaacttaagactccaatacttt 12469776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 32403119 - 32403063
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttaca 229  Q
    ||||||| | |||||||||||||||||||  |||| ||||||| |||||||||||||    
T  32403119 acaacttagacaacatcaacaacttaagaatccaacactttggaacgacatcttaca 32403063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 45458062 - 45458102
Alignment:
Q  5 taggagaaatgtaaaagatgtataccagaaacattcaaggt 45  Q
    |||||||||| |||| ||||||||||||||||||| |||||    
T  45458062 taggagaaatataaacgatgtataccagaaacatttaaggt 45458102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 55499947 - 55499911
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  55499947 ttcatactcaatcatctcccaatttactaaactcaac 55499911  T

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Target: scaffold0019 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 132821 - 132945
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaacatcaacaacttaagaccccaatactttgg 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  132821 aacatcaacgacaacgtagacaacgacaactgcgcataaataattatgacttactccacaacttggtcaacatcaacaacttaagactccaatactttgg 132920  T
Q  217 acgacatcttacatcttagaccgtc 241  Q
    |||||||||||||||||||||||||    
T  132921 acgacatcttacatcttagaccgtc 132945  T

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Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 27941773 - 27941716
Alignment:
Q  133 tagacaacgacaactgtgcataaataattataacttactccacaacttggtcaacatc 190  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27941773 tagacaacgacgactgtgcataaataattataacttactccacaacttggtcaacatc 27941716  T

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Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 32949756 - 32949821
Alignment:
Q  122 caacgacaacgtagacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||| || | ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32949756 caacgacgacatggacaacgacaactgtgcataaataattatgacttactccacaacttggtcaac 32949821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 22253324 - 22253258
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  22253324 acaacttggacaacatcaacatcttaagactccaatactttggaacgacatcttacatcttagaccg 22253258  T

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Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 22381891 - 22381825
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt-ggacgacatcttacatcttagaccg 239  Q
    ||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||    
T  22381891 acaacttggacaacatcaagaacttaagactccaatactttgggacgacatcttacatcttagaccg 22381825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 20454355 - 20454429
Alignment:
Q  117 aacatcaacgacaacgtagacaacgaca-----actgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||     ||||||||||||||||||| |||||| ||||||||||||||||    
T  20454355 aacatcaacgacaacgtagacaacgacaacacgactgtgcataaataattatgacttac-ccacaacttggtcaac 20454429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 18024621 - 18024576
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  18024621 acaactgtgcataaataattatgacttactccacaacttggtcaac 18024576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 18613442 - 18613482
Alignment:
Q  70 tggtttcatactcaatcatctccaaattcactaaactcaac 110  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18613442 tggtttcatactcaatcatctccaaattcactaaactcaac 18613482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 19882094 - 19882167
Alignment:
Q  117 aacatcaacgacaacgtagacaacg-----acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||||||     |||||||||||||||||||||| |||||  ||||||||||||||||    
T  19882094 aacatcaacgacaacgtagacaacgacaacacaactgtgcataaataattatgactta--ccacaacttggtcaac 19882167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 5083313 - 5083247
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||| |||||||||||||||||| ||||    
T  5083313 acaacttggacaacatcaacaacttaggactccaacactttggaacgacatcttacatcttaaaccg 5083247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 362109 - 362057
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||| |||| |||| |||||| ||||||||||||||||    
T  362109 gacaacgacaactgtgcatgaatagttatgacttaccccacaacttggtcaac 362057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 5760517 - 5760560
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  5760517 acaacttggacaacatcaacaacttaagactccaatactttgga 5760560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 28397511 - 28397582
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    ||||||| | |||||||| ||||||| ||| |||||||||||| |||||||||| |||||||||||| ||||    
T  28397511 acaacttagacaacatcatcaacttaggactccaatactttggaacgacatctttcatcttagaccgactca 28397582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 363837 - 363890
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  363837 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 363890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 19879952 - 19880017
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagacc 238  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||| || |||||    
T  19879952 acaactttggcaacatcaacaacttaagactccaatactttggaacgacaacttacaactcagacc 19880017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 23478204 - 23478268
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||| | |||||||    
T  23478204 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttataacttagac 23478268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 37515488 - 37515531
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  37515488 acaacttagacaacatcaacaacttaagactccaatactttgga 37515531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 6608501 - 6608451
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaa 195  Q
    |||||||||||  | |||| ||||||||| |||||||||||||||||||||    
T  6608501 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaa 6608451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 44431910 - 44431963
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||| ||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  44431910 acaattgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 44431963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 20460084 - 20460113
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  20460084 aacatcaacgacaacgtagacaacgacaac 20460113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 22920865 - 22920813
Alignment:
Q  134 agacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||| |||||| |||||||||||| | | ||||||||||||||||||||||    
T  22920865 agacaacaacaactatgcataaataatcaga-cttactccacaacttggtcaac 22920813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 17438367 - 17438311
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    |||||||||||||||| ||| |||| ||||||| ||||| |||||||||||| ||||    
T  17438367 caacatcaacaacttaggactccaacactttggaacgacctcttacatcttaaaccg 17438311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 18833398 - 18833454
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttaca 229  Q
    ||||||||| ||||||| |||||||||||| ||||||||| || |||||| ||||||    
T  18833398 acaacttggacaacatcgacaacttaagactccaatacttcggaacgacaacttaca 18833454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 18327 - 18261
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt-ggacgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  18327 acaacttggacaacatcaacaacttaagactccaatactttgggacgacatcttacatcttagaccg 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 21160 - 21222
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaacatcaacaact 197  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  21160 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaacattaacaact 21222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 110677 - 110715
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  110677 aatcatctccagattcactaaactcaacaacggcaacat 110715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 36141 - 36212
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    ||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||||    
T  36141 acaacttggacaacatcaacaacttaagactccaatactttggaaagacatcttacatcttagaccgactca 36212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 3024 - 3068
Alignment:
Q  143 caactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||    
T  3024 caacagtgcataaataattatgacttgctccacaacttggtcaac 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 3149 - 3222
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaa------ctgtgcataaataattataacttactccacaacttggtc 184  Q
    |||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||||||||||||||    
T  3149 aacatcaacgacaacgtagacaacgacaataacaactgtgcataaataattatgacttactccacaacttggtc 3222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 3218 - 3284
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt-ggacgacatcttacatcttagaccg 239  Q
    ||||||||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  3218 acaacttggacaaaatcaacaacttaagactccaatactttgggacgacatcttacatcttagaccg 3284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 23112514 - 23112468
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaacgg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23112514 ttggtttcatactcaatcatctccaaattcactaaactcaacaacgg 23112468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 22470153 - 22470205
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  22470153 gacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 22470205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 17812512 - 17812586
Alignment:
Q  117 aacatcaacgacaacgtagacaacgaca-----actgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||     ||||||||||||||||||| |||||| ||||||||||||||||    
T  17812512 aacatcaacgacaacgtagacaacgacaacacgactgtgcataaataattatgacttac-ccacaacttggtcaac 17812586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 23469774 - 23469835
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||    
T  23469774 caacatcaacaacttaagactccaacactttggaacgacatcttacatcttagaccgactca 23469835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 24277550 - 24277468
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaa------------ctgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||||||||||            |||||||||||||||||| |||||||||||||||||||||||    
T  24277550 aacatcaacgacaacgtagacaacgacaacgacaacaacgtctgtgcataaataattatgacttactccacaacttggtcaac 24277468  T

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Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 24384704 - 24384745
Alignment:
Q  146 ctgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  24384704 ctgtgcataaataattatgacttactccacaacttggtcaac 24384745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 8952964 - 8952912
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||| ||||||||||||||||| |||| ||||||||||||||||||    
T  8952964 gacaacaacaattgtgcataaataattatgacttgctccacaacttggtcaac 8952912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 41876463 - 41876411
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| |||||||||    
T  41876463 gacaacaacaactgtgcataaataaatatgacttactccacaaattggtcaac 41876411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 22758894 - 22758841
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  22758894 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 22758841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 17010849 - 17010913
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| |||||||||||| ||| || |||||| |||||||    
T  17010849 acaacttagacaacatcaacaacttaagactccaatactttggaacggcaacttacaacttagac 17010913  T

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Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 22439551 - 22439516
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaa 109  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22439551 ttcatactcaatcatctcccaattcactaaactcaa 22439516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 29325469 - 29325418
Alignment:
Q  145 actgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||  | |||| ||||||||| ||||||||||||||||||||||    
T  29325469 actgtgcataataacttatgacttactccccaacttggtcaacatcaacaac 29325418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 29447839 - 29447882
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  29447839 acaacttagacaacatcaacaacttaagactccaatactttgga 29447882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 22107709 - 22107663
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttaca 229  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  22107709 caacatcaacaacttaagactccaatactttggaacgacaacttaca 22107663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 37598979 - 37598941
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  37598979 aatcatctccagattcactaaactcaacaacggcaacat 37598941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 42960566 - 42960604
Alignment:
Q  83 aatcatctccaaattcactaaactcaacaacggaaacat 121  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  42960566 aatcatctccagattcactaaactcaacaacggcaacat 42960604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 24384663 - 24384692
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  24384663 aacatcaacgacaacgtagacaacgacaac 24384692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 26361303 - 26361262
Alignment:
Q  155 aataattataacttactccacaacttggtcaacatcaacaac 196  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  26361303 aataactataactcactccccaacttggtcaacatcaacaac 26361262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 22357814 - 22357770
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaa 186  Q
    |||||| ||||||||||||||| |||| ||||| |||||||||||    
T  22357814 acaactatgcataaataattatgacttgctccataacttggtcaa 22357770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 41159 - 41087
Alignment:
Q  121 tcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||      ||||||||||||||||| |||||||||||||||||||||||    
T  41159 tcaacgacaacgtagacaacgacaacaacaactgtgcataaataattatgacttactccacaacttggtcaac 41087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 1239 - 1283
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaacaac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  1239 ttggtttcatactcaatcatctccaaattcactaaactcaacaac 1283  T

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Target: scaffold0151 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 2348 - 2400
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  2348 gacaacgacaactgtgcataaataattatgacttaccccacaacttggtcaac 2400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 9192 - 9244
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9192 gacaacgacaactgtgcataaataattatgacttaccccacaacttggtcaac 9244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 20887 - 20939
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20887 gacaacgacatctgtgcataaataattatgacttactccacaacttggtcaac 20939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 19795 - 19734
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    |||||||| ||||||| ||| |||||||||||| |||||||| | |||||||||||| ||||    
T  19795 caacatcatcaacttaggactccaatactttggaacgacatcattcatcttagaccgactca 19734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 10620 - 10667
Alignment:
Q  140 cgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10620 cgacaactgtgcataaataattatgacttactccacaacttggtcaac 10667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 607 - 674
Alignment:
Q  173 cacaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    |||||||||| |||||  ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  607 cacaacttggacaacaataacaacttaagactccaatactttggaacgacatcttacatcttagaccg 674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 8122 - 8188
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    |||| |||| |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  8122 acaatttggacaacatcaacaacttaagactccaatactttggaacgacatcttacatctaagaccg 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 221366 - 221300
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||  |||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  221366 acaacttgaacaacatcaacaacttaagcctccaatactttggaacgacatcttacatcttagaccg 221300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 15824 - 15783
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15824 ttggtttcatactcaatcatctccaaattcactaaactcaac 15783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 8202 - 8247
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  8202 acaactgtgcataaataattatgacttactccacaacttggtcaac 8247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 159890 - 159814
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac------tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||||||||||||||||      |||||||||||||||||   |||||||||||||||||||||    
T  159890 aacatcaacgacaacgtagacaacgacaacaacaattgtgcataaataattatggtttactccacaacttggtcaac 159814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 2515 - 2463
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  2515 gacaacaacaattgtgcataaataattatgacttactccacaacttggtcaac 2463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 1720 - 1668
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  1720 gacaacgacaatagtgcataaataattataacttacttcacaacttggtcaac 1668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 17465 - 17529
Alignment:
Q  175 caacttggtcaacatcaacaacttaagaccccaatactttggacgacatcttacatcttagaccg 239  Q
    |||||||| |||| | ||||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  17465 caacttggacaacgttaacaacttaggactccaatactttcgacgacatcttacatcttagaccg 17529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 6758 - 6810
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  6758 gacaacaacaactatgcataaataattatgacttactccacaacttggtcaac 6810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 2822 - 2896
Alignment:
Q  117 aacatcaacgacaacgtagacaacgaca-----actgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||| |||||||||||||||||||||||     ||||||||||||||||||| |||||| ||||||||||||||||    
T  2822 aacaacaacgacaacgtagacaacgacaacacgactgtgcataaataattatgacttac-ccacaacttggtcaac 2896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 1855 - 1918
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt-ggacgacatcttacatcttaga 236  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||| |||||    
T  1855 acaacttggacaacatcaacaacttaagactccaatactttgggacgacaccttacatattaga 1918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 2902 - 2852
Alignment:
Q  137 caacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  2902 caacaacaactatgcataaataattatgacttactccacaacttggtcaac 2852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 38311 - 38245
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||| | |||||||||||||||||||| |||||||||||| || ||||||| ||||||||||||    
T  38311 acaacttagacaacatcaacaacttaagactccaatactttggaacaacatctttcatcttagaccg 38245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 125732 - 125791
Alignment:
Q  179 ttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    |||| ||||||| |||||||||||| |||||||||||| |||||| |||||| |||||||    
T  125732 ttggacaacatcgacaacttaagactccaatactttggaacgacaacttacaacttagac 125791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 125781 - 125824
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  125781 acaacttagacaacatcaacaacttaagactccaatactttgga 125824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 1436 - 1391
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  1436 acaattgtgcataaataattatgacttactccacaacttggtcaac 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 102755 - 102714
Alignment:
Q  69 ttggtttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  102755 ttggtttcatactcaatcatctccaaatttactaaactcaac 102714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 174764 - 174688
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaact------gtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||| ||||||||||||||       |||||||||||||||  |||||||||||||||||||||||    
T  174764 aacatcaacgacaacatagacaacgacaacaacaacagtgcataaataattaagacttactccacaacttggtcaac 174688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 10345 - 10409
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  10345 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacttagac 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 1252 - 1292
Alignment:
Q  147 tgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  1252 tgtgcataaataattatgacttactccacaacttggtcaac 1292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 29265 - 29213
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||| |||||    
T  29265 gacaacgacatctgtgcataaataattatgacttattccacaacttgatcaac 29213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 18015 - 18067
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||| |||||||| |||||||| |||||||||||||||||||||||    
T  18015 gacaacaacaattgtgcatacataattatgacttactccacaacttggtcaac 18067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 137824 - 137903
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaacttaagaccccaatactttggacgaca 222  Q
    |||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||| || ||| ||| ||||| | ||||||    
T  137824 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaacctatgactccattacttagaacgaca 137903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 1535 - 1492
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  1535 acaacttggacaacatcaacaacttaagactccaatactttgga 1492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 550 - 499
Alignment:
Q  136 acaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||||    
T  550 acaacaacaactgtgcataaataattatgacttacttcaccacttggtcaac 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 17076 - 17005
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccgtctca 244  Q
    ||||||| | |||||||| ||||||| ||| |||||||||||| |||||||||| |||||||||||| ||||    
T  17076 acaacttagacaacatcatcaacttaggactccaatactttggaacgacatctttcatcttagaccggctca 17005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 262 - 300
Alignment:
Q  149 tgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  262 tgcataaataattatgacttactccacaacttggtcaac 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 8731 - 8678
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  8731 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 8678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 8851 - 8917
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||| | |||||||||||||||| ||| |||||||||||| |||||||| | ||||||||||||    
T  8851 acaacttagacaacatcaacaacttatgactccaatactttggaacgacatccttcatcttagaccg 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 2917 - 2983
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||| ||||| |||||||||||| ||||    
T  2917 acaacttggacaacatcaacaacttaggactccaacactttggaacgacctcttacatcttaaaccg 2983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 2388 - 2441
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaacatcaacaac 196  Q
    |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  2388 acaactgtgcataa-taactatgacttactccccaacttggtcaacatcaacaac 2441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 7511 - 7576
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagacc 238  Q
    ||||||||| |||||||||||||||||||  |||||||||||| |||||| |||||| || |||||    
T  7511 acaacttggacaacatcaacaacttaagaatccaatactttggaacgacaacttacaactcagacc 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 15416 - 15477
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatctta 234  Q
    ||||||||| |||||||||||||||||||  |||||||||||| |||||| |||||| ||||    
T  15416 acaacttggacaacatcaacaacttaagaatccaatactttggaacgacaacttacaactta 15477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 34311 - 34266
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||    
T  34311 acaattgtgcataaataattatgacttactccacatcttggtcaac 34266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 116088 - 116125
Alignment:
Q  73 tttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  116088 tttcatactcaatcatctcaaaattcactaaactcaac 116125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 205279 - 205227
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| ||| |||||||||||||||||| |||||||  ||||||||||||||    
T  205279 gacaacaacatctgtgcataaataattatgacttactgtacaacttggtcaac 205227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 10814 - 10866
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||| ||||||||||||||||| |||| ||||| ||||||||||||    
T  10814 gacaacaacaattgtgcataaataattatcactttctccataacttggtcaac 10866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 286 - 234
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| ||| |||||    
T  286 gacaacaacaactgtgcataaataaatatgacttactccacaatttgttcaac 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 7614 - 7658
Alignment:
Q  173 cacaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||    
T  7614 cacaacttggacaacatcgacaacttaagactccaatactttgga 7658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 20963 - 21027
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| || ||| |||||| |||||||    
T  20963 acaacttggacaacatcgacaacttaagactccaatactttggaacaacaacttacaacttagac 21027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 21017 - 21060
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  21017 acaacttagacaacatcaacaacttaagactccaatactttgga 21060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 51096 - 51148
Alignment:
Q  135 gacaacgacaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    |||||| |||| | || |||||||||||| |||||||||||||||||||||||    
T  51096 gacaacaacaaatttggataaataattatgacttactccacaacttggtcaac 51148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 51066 - 51095
Alignment:
Q  117 aacatcaacgacaacgtagacaacgacaac 146  Q
    ||||||||||||||||||||||||||||||    
T  51066 aacatcaacgacaacgtagacaacgacaac 51095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 10125 - 10188
Alignment:
Q  175 caacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    |||||| | |||| ||||||||||||||| |||| ||||||| ||||||| |||||||||||||    
T  10125 caacttagacaacttcaacaacttaagactccaacactttggaacgacatattacatcttagac 10188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 117138 - 117181
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgga 217  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||    
T  117138 acaacttggacaacatcgacaacttaagactccaatactttgga 117181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 117202 - 117248
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttaca 229  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  117202 caacatcaacaacttaagactccaatactttggaacgacaacttaca 117248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 119844 - 119877
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgga 217  Q
    |||||||||||||||||||| |||||||||||||    
T  119844 caacatcaacaacttaagactccaatactttgga 119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 899 - 965
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagaccg 239  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||| ||||| ||||| |||||| ||||    
T  899 acaacttggacaacatcaacaacttaggactccaacactttggaacgacctcttagatcttaaaccg 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 2708 - 2654
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagac 237  Q
    |||||||||||||||||| | |||||||||||| |||||| |||||| |||||||    
T  2708 caacatcaacaacttaaggctccaatactttggaacgacaacttacaacttagac 2654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 497387 - 497453
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt-ggacgacatcttacatcttagaccg 239  Q
    ||||||| | ||||||||||||||||||||  ||||||||| | |||||||||| ||||||| ||||    
T  497387 acaacttagacaacatcaacaacttaagacttcaatactttagaacgacatctttcatcttaaaccg 497453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 298 - 343
Alignment:
Q  142 acaactgtgcataaataattataacttactccacaacttggtcaac 187  Q
    ||||| |||||||  ||||||| |||||||||||||||||||||||    
T  298 acaacagtgcatatttaattatgacttactccacaacttggtcaac 343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 688 - 721
Alignment:
Q  184 caacatcaacaacttaagaccccaatactttgga 217  Q
    |||||||||||||||||||| |||||||||||||    
T  688 caacatcaacaacttaagactccaatactttgga 721  T

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Target: scaffold0436 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 7992 - 8057
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatactttgg-acgacatcttacatcttagacc 238  Q
    ||||||| | |||||||||||||||||||| |||| ||||||| | |||| |||||| ||||||||    
T  7992 acaacttagacaacatcaacaacttaagactccaacactttggaaagacaacttacaacttagacc 8057  T

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Target: scaffold0317 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 582 - 615
Alignment:
Q  77 atactcaatcatctccaaattcactaaactcaac 110  Q
    |||||||||||||| |||||||||||||||||||    
T  582 atactcaatcatcttcaaattcactaaactcaac 615  T

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Target: scaffold0476 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 4124 - 4088
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaac 110  Q
    |||||||||||||| |||| |||||||||||||||||    
T  4124 ttcatactcaatcacctcccaattcactaaactcaac 4088  T

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Target: scaffold0165 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 3529 - 3569
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt 214  Q
    ||||||| | |||||||||||||||||||| ||||||||||    
T  3529 acaacttagacaacatcaacaacttaagactccaatacttt 3569  T

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Target: scaffold0165; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 7593 - 7633
Alignment:
Q  174 acaacttggtcaacatcaacaacttaagaccccaatacttt 214  Q
    ||||||| | |||||||||||||||||||| ||||||||||    
T  7593 acaacttagacaacatcaacaacttaagactccaatacttt 7633  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 4442 - 4406
Alignment:
Q  74 ttcatactcaatcatctccaaattcactaaactcaac 110  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  4442 ttcatactcaatcatctcccaatttactaaactcaac 4406  T

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