View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12986_high_12 (Length: 326)

Name: NF12986_high_12
Description: NF12986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12986_high_12
NF12986_high_12
[»] chr5 (48 HSPs)
chr5 (1-312)||(38816628-38816932)
chr5 (136-211)||(19820428-19820503)
chr5 (162-291)||(22423764-22423895)
chr5 (136-203)||(22013364-22013431)
chr5 (136-210)||(42469171-42469245)
chr5 (161-210)||(15410483-15410532)
chr5 (158-210)||(6326332-6326384)
chr5 (134-259)||(37328829-37328955)
chr5 (151-209)||(15382442-15382500)
chr5 (158-211)||(21191090-21191143)
chr5 (136-203)||(2436878-2436939)
chr5 (158-202)||(21522722-21522766)
chr5 (158-202)||(21533288-21533332)
chr5 (175-259)||(3966492-3966577)
chr5 (136-211)||(6247572-6247647)
chr5 (151-210)||(21137654-21137713)
chr5 (164-210)||(5873548-5873594)
chr5 (158-204)||(36642803-36642849)
chr5 (175-208)||(6035472-6035505)
chr5 (244-293)||(8420075-8420124)
chr5 (166-211)||(14674249-14674294)
chr5 (162-211)||(19552577-19552626)
chr5 (158-211)||(19579673-19579726)
chr5 (166-211)||(27144443-27144488)
chr5 (136-209)||(30135264-30135336)
chr5 (166-211)||(34879330-34879375)
chr5 (239-291)||(9929668-9929720)
chr5 (151-211)||(13287433-13287493)
chr5 (175-211)||(17123037-17123073)
chr5 (151-259)||(41995436-41995543)
chr5 (158-209)||(4105229-4105280)
chr5 (175-259)||(11685928-11686012)
chr5 (165-211)||(9449448-9449494)
chr5 (158-204)||(16304465-16304511)
chr5 (263-293)||(24906250-24906280)
chr5 (149-211)||(26312732-26312794)
chr5 (180-210)||(27932229-27932259)
chr5 (177-211)||(28588708-28588742)
chr5 (166-211)||(7175053-7175098)
chr5 (166-211)||(16203829-16203874)
chr5 (153-202)||(22299523-22299572)
chr5 (138-211)||(26716097-26716169)
chr5 (138-211)||(26985837-26985909)
chr5 (136-210)||(32630770-32630840)
chr5 (184-213)||(32766975-32767004)
chr5 (159-204)||(41633708-41633753)
chr5 (158-210)||(24906336-24906388)
chr5 (175-211)||(31084312-31084348)
[»] chr7 (46 HSPs)
chr7 (136-210)||(27944991-27945065)
chr7 (136-210)||(24105629-24105702)
chr7 (158-211)||(11722132-11722185)
chr7 (149-259)||(24339605-24339716)
chr7 (161-242)||(19206025-19206107)
chr7 (179-261)||(29787354-29787435)
chr7 (151-211)||(1433419-1433479)
chr7 (131-291)||(7328639-7328805)
chr7 (136-207)||(2034392-2034462)
chr7 (160-211)||(2425767-2425818)
chr7 (175-259)||(32308109-32308194)
chr7 (136-211)||(43027503-43027578)
chr7 (151-210)||(43249958-43250017)
chr7 (161-211)||(26733279-26733329)
chr7 (181-291)||(11700798-11700909)
chr7 (160-209)||(49107795-49107844)
chr7 (165-242)||(22484004-22484082)
chr7 (151-254)||(30731002-30731104)
chr7 (137-211)||(598160-598233)
chr7 (160-210)||(5235960-5236010)
chr7 (169-211)||(8046061-8046103)
chr7 (169-211)||(23191879-23191921)
chr7 (151-209)||(26329418-26329476)
chr7 (160-209)||(4017830-4017879)
chr7 (178-251)||(11072290-11072362)
chr7 (159-211)||(11061110-11061162)
chr7 (151-211)||(17851396-17851456)
chr7 (175-211)||(20549780-20549816)
chr7 (167-211)||(21828439-21828483)
chr7 (159-211)||(22868015-22868067)
chr7 (172-211)||(2948669-2948708)
chr7 (175-259)||(6630897-6630982)
chr7 (159-202)||(13770664-13770707)
chr7 (159-259)||(15902795-15902896)
chr7 (179-210)||(28155563-28155594)
chr7 (193-259)||(9933282-9933347)
chr7 (169-211)||(20545270-20545312)
chr7 (166-208)||(25791633-25791675)
chr7 (263-292)||(17852091-17852120)
chr7 (136-209)||(21864756-21864829)
chr7 (166-207)||(26019669-26019710)
chr7 (164-204)||(10042915-10042955)
chr7 (263-291)||(15680900-15680928)
chr7 (151-211)||(21141016-21141076)
chr7 (159-211)||(25481875-25481927)
chr7 (136-188)||(33994162-33994214)
[»] chr6 (51 HSPs)
chr6 (158-259)||(10294079-10294181)
chr6 (151-211)||(9027143-9027203)
chr6 (136-211)||(853893-853968)
chr6 (151-259)||(16766662-16766771)
chr6 (151-211)||(5000660-5000720)
chr6 (151-291)||(5732474-5732604)
chr6 (136-204)||(8365560-8365628)
chr6 (138-210)||(12696277-12696348)
chr6 (161-291)||(8805524-8805656)
chr6 (151-259)||(9107355-9107464)
chr6 (160-211)||(9629357-9629408)
chr6 (136-211)||(30866178-30866253)
chr6 (136-210)||(6389693-6389767)
chr6 (161-211)||(9658854-9658904)
chr6 (136-204)||(3398569-3398637)
chr6 (151-211)||(7938081-7938141)
chr6 (162-210)||(13851712-13851760)
chr6 (151-210)||(7977865-7977924)
chr6 (173-211)||(19040339-19040377)
chr6 (151-254)||(34073337-34073441)
chr6 (158-211)||(426548-426601)
chr6 (166-211)||(20371144-20371189)
chr6 (159-211)||(8777007-8777059)
chr6 (151-211)||(34595099-34595159)
chr6 (159-242)||(31579229-31579311)
chr6 (136-210)||(25038106-25038180)
chr6 (137-211)||(31959111-31959184)
chr6 (170-211)||(7265627-7265668)
chr6 (166-211)||(17841623-17841668)
chr6 (136-209)||(4877890-4877965)
chr6 (159-211)||(16833281-16833333)
chr6 (163-211)||(17341698-17341746)
chr6 (244-291)||(426478-426525)
chr6 (159-291)||(2117050-2117175)
chr6 (136-211)||(7996412-7996487)
chr6 (136-211)||(8022314-8022389)
chr6 (160-211)||(10339160-10339211)
chr6 (151-209)||(3209347-3209404)
chr6 (136-210)||(10649278-10649352)
chr6 (136-210)||(20518295-20518369)
chr6 (263-293)||(34073276-34073306)
chr6 (178-211)||(10842524-10842557)
chr6 (175-211)||(677826-677862)
chr6 (159-211)||(10770708-10770760)
chr6 (159-207)||(18803549-18803597)
chr6 (178-210)||(21395342-21395374)
chr6 (175-211)||(21424836-21424872)
chr6 (178-255)||(26562681-26562759)
chr6 (159-211)||(33001323-33001375)
chr6 (159-211)||(34172167-34172218)
chr6 (175-259)||(34290064-34290147)
[»] chr8 (33 HSPs)
chr8 (158-259)||(22651948-22652050)
chr8 (153-259)||(29510289-29510396)
chr8 (136-204)||(25192388-25192456)
chr8 (145-211)||(926822-926888)
chr8 (158-211)||(27213519-27213572)
chr8 (136-204)||(126390-126457)
chr8 (136-211)||(13436998-13437073)
chr8 (149-211)||(24362236-24362298)
chr8 (166-211)||(31109552-31109597)
chr8 (136-211)||(4298920-4298994)
chr8 (136-211)||(11944615-11944690)
chr8 (161-244)||(37283812-37283894)
chr8 (149-211)||(4673459-4673521)
chr8 (136-254)||(11927076-11927195)
chr8 (166-211)||(31236611-31236656)
chr8 (178-211)||(39954313-39954346)
chr8 (151-211)||(2572090-2572150)
chr8 (159-211)||(20873042-20873094)
chr8 (163-259)||(29776013-29776108)
chr8 (159-210)||(24669406-24669457)
chr8 (137-204)||(31556948-31557015)
chr8 (135-178)||(40332154-40332197)
chr8 (151-210)||(44067481-44067540)
chr8 (177-211)||(27101506-27101540)
chr8 (169-211)||(34897068-34897110)
chr8 (162-232)||(36934646-36934715)
chr8 (178-211)||(13844630-13844663)
chr8 (151-204)||(22197783-22197836)
chr8 (166-211)||(36450788-36450833)
chr8 (162-210)||(17751651-17751699)
chr8 (162-210)||(17760638-17760686)
chr8 (136-204)||(28642358-28642426)
chr8 (136-204)||(28745448-28745516)
[»] chr2 (44 HSPs)
chr2 (136-247)||(21782817-21782927)
chr2 (136-200)||(33519736-33519800)
chr2 (136-211)||(20539708-20539783)
chr2 (161-211)||(21616737-21616787)
chr2 (136-209)||(19536434-19536507)
chr2 (135-208)||(23717976-23718048)
chr2 (135-208)||(24105648-24105720)
chr2 (161-259)||(36409614-36409711)
chr2 (151-236)||(18276486-18276570)
chr2 (137-202)||(21624217-21624282)
chr2 (151-242)||(4332891-4332981)
chr2 (137-211)||(38117193-38117261)
chr2 (184-242)||(1327976-1328033)
chr2 (135-209)||(14996260-14996333)
chr2 (135-210)||(21374734-21374810)
chr2 (151-241)||(28412315-28412404)
chr2 (153-211)||(31018557-31018615)
chr2 (135-256)||(2331743-2331863)
chr2 (149-210)||(4142875-4142936)
chr2 (151-261)||(18420417-18420528)
chr2 (162-210)||(10535794-10535842)
chr2 (178-291)||(19573970-19574078)
chr2 (159-211)||(30404884-30404936)
chr2 (151-211)||(31284013-31284073)
chr2 (186-259)||(44860320-44860394)
chr2 (153-211)||(896180-896236)
chr2 (244-291)||(19536361-19536408)
chr2 (159-210)||(21091696-21091747)
chr2 (176-211)||(37411278-37411313)
chr2 (137-211)||(2423820-2423894)
chr2 (164-202)||(6940233-6940271)
chr2 (244-290)||(18255945-18255991)
chr2 (159-201)||(18589171-18589213)
chr2 (144-210)||(23354687-23354753)
chr2 (244-290)||(34691770-34691816)
chr2 (244-290)||(34714182-34714228)
chr2 (166-211)||(16069288-16069333)
chr2 (166-211)||(31727837-31727882)
chr2 (166-203)||(37558957-37558994)
chr2 (141-210)||(41942060-41942129)
chr2 (167-211)||(24894370-24894414)
chr2 (166-210)||(39323244-39323288)
chr2 (255-291)||(42511322-42511358)
chr2 (178-210)||(42832311-42832343)
[»] scaffold0306 (1 HSPs)
scaffold0306 (135-211)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (136-291)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (135-211)||(21902-21978)
[»] chr1 (50 HSPs)
chr1 (151-211)||(40917716-40917776)
chr1 (152-211)||(398799-398858)
chr1 (159-211)||(2896155-2896207)
chr1 (144-290)||(10572535-10572690)
chr1 (135-210)||(5376535-5376609)
chr1 (136-211)||(5927374-5927449)
chr1 (159-211)||(6427323-6427375)
chr1 (158-250)||(1486703-1486796)
chr1 (151-251)||(38503285-38503386)
chr1 (149-204)||(48040503-48040558)
chr1 (158-236)||(1262856-1262933)
chr1 (161-211)||(9709795-9709845)
chr1 (161-211)||(34298411-34298461)
chr1 (136-210)||(39130802-39130876)
chr1 (238-291)||(48547938-48547991)
chr1 (175-211)||(17831565-17831601)
chr1 (175-211)||(36878450-36878486)
chr1 (168-211)||(12443494-12443537)
chr1 (136-211)||(31014993-31015068)
chr1 (190-293)||(44482234-44482343)
chr1 (159-210)||(48450622-48450673)
chr1 (145-211)||(15641064-15641130)
chr1 (149-211)||(19562655-19562716)
chr1 (166-211)||(6415035-6415080)
chr1 (158-211)||(20157384-20157437)
chr1 (161-210)||(41877505-41877554)
chr1 (166-211)||(46348417-46348462)
chr1 (151-211)||(10577769-10577829)
chr1 (136-196)||(34315663-34315722)
chr1 (159-210)||(609493-609544)
chr1 (136-191)||(9630634-9630689)
chr1 (127-210)||(21378520-21378602)
chr1 (164-210)||(2851000-2851045)
chr1 (175-209)||(3490426-3490460)
chr1 (159-209)||(5944254-5944304)
chr1 (153-211)||(7918245-7918303)
chr1 (177-211)||(10475011-10475045)
chr1 (151-209)||(13011252-13011310)
chr1 (166-204)||(18556497-18556535)
chr1 (136-211)||(38078695-38078771)
chr1 (175-213)||(40285686-40285724)
chr1 (159-204)||(14359562-14359607)
chr1 (178-211)||(21530681-21530714)
chr1 (181-259)||(25361881-25361960)
chr1 (159-211)||(5898300-5898352)
chr1 (158-210)||(6612206-6612258)
chr1 (178-259)||(9828036-9828118)
chr1 (159-211)||(16297317-16297369)
chr1 (162-210)||(23636084-23636132)
chr1 (178-242)||(25452152-25452215)
[»] chr3 (50 HSPs)
chr3 (136-211)||(8383207-8383282)
chr3 (149-248)||(5441029-5441128)
chr3 (151-210)||(24205076-24205135)
chr3 (136-202)||(8842280-8842346)
chr3 (172-261)||(8039818-8039908)
chr3 (151-211)||(28917966-28918026)
chr3 (151-210)||(4991002-4991061)
chr3 (145-204)||(10335327-10335386)
chr3 (136-259)||(25064859-25064981)
chr3 (136-211)||(55401025-55401100)
chr3 (137-211)||(8587055-8587129)
chr3 (160-210)||(9800014-9800064)
chr3 (137-211)||(32429414-32429488)
chr3 (159-211)||(2620087-2620139)
chr3 (168-232)||(5407261-5407324)
chr3 (151-211)||(15796328-15796388)
chr3 (159-211)||(26492239-26492291)
chr3 (161-211)||(12674535-12674585)
chr3 (135-209)||(14223889-14223962)
chr3 (153-259)||(14829657-14829763)
chr3 (166-207)||(21720744-21720785)
chr3 (151-211)||(3164059-3164119)
chr3 (137-209)||(14618732-14618804)
chr3 (159-211)||(26508083-26508135)
chr3 (166-209)||(3865592-3865635)
chr3 (160-211)||(14840325-14840376)
chr3 (255-293)||(4466538-4466576)
chr3 (263-293)||(5440965-5440995)
chr3 (158-204)||(7171474-7171520)
chr3 (166-204)||(10318075-10318113)
chr3 (161-211)||(11610496-11610546)
chr3 (159-213)||(11658788-11658842)
chr3 (255-293)||(13807237-13807275)
chr3 (158-232)||(34307794-34307867)
chr3 (166-211)||(6525714-6525759)
chr3 (168-209)||(12703989-12704030)
chr3 (135-209)||(14747510-14747584)
chr3 (158-211)||(25093474-25093527)
chr3 (161-210)||(25652066-25652115)
chr3 (166-207)||(37077338-37077379)
chr3 (151-204)||(41961691-41961744)
chr3 (137-201)||(3631644-3631708)
chr3 (175-211)||(4987325-4987361)
chr3 (159-211)||(14979154-14979206)
chr3 (175-211)||(21479107-21479143)
chr3 (178-210)||(25074781-25074813)
chr3 (175-211)||(26290360-26290396)
chr3 (255-291)||(27505334-27505370)
chr3 (163-211)||(32804574-32804622)
chr3 (175-211)||(40052321-40052357)
[»] scaffold0168 (3 HSPs)
scaffold0168 (145-291)||(21002-21149)
scaffold0168 (230-291)||(21217-21278)
scaffold0168 (230-291)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (151-211)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (151-210)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (151-259)||(241559-241668)
[»] scaffold0018 (2 HSPs)
scaffold0018 (139-211)||(178853-178925)
scaffold0018 (161-210)||(192284-192333)
[»] chr4 (31 HSPs)
chr4 (151-211)||(23293020-23293080)
chr4 (153-210)||(847918-847975)
chr4 (158-211)||(36635296-36635349)
chr4 (151-210)||(24343472-24343531)
chr4 (153-259)||(30982863-30982967)
chr4 (175-210)||(35723420-35723455)
chr4 (130-211)||(7670625-7670709)
chr4 (175-209)||(17345451-17345485)
chr4 (161-211)||(20521883-20521933)
chr4 (151-209)||(20633450-20633508)
chr4 (161-210)||(7012041-7012090)
chr4 (140-209)||(28084475-28084544)
chr4 (136-211)||(5775392-5775469)
chr4 (136-204)||(28720827-28720894)
chr4 (166-291)||(30298926-30299048)
chr4 (166-291)||(30327794-30327916)
chr4 (136-211)||(12628619-12628693)
chr4 (151-210)||(21945468-21945527)
chr4 (153-211)||(5414206-5414264)
chr4 (166-211)||(16184799-16184842)
chr4 (177-211)||(40613441-40613475)
chr4 (159-209)||(49430998-49431048)
chr4 (166-207)||(13783261-13783302)
chr4 (166-211)||(30522949-30522994)
chr4 (179-211)||(1747205-1747237)
chr4 (166-242)||(2234230-2234305)
chr4 (133-213)||(3947798-3947877)
chr4 (247-291)||(18844423-18844467)
chr4 (255-291)||(28470448-28470484)
chr4 (153-209)||(31603045-31603101)
chr4 (151-203)||(35158027-35158079)
[»] scaffold0044 (1 HSPs)
scaffold0044 (137-261)||(53135-53256)
[»] scaffold0004 (1 HSPs)
scaffold0004 (169-210)||(92790-92831)
[»] scaffold0279 (1 HSPs)
scaffold0279 (136-212)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (151-210)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (166-211)||(51791-51836)
[»] scaffold0652 (1 HSPs)
scaffold0652 (151-211)||(496-556)
[»] scaffold0122 (1 HSPs)
scaffold0122 (151-248)||(8631-8729)
[»] scaffold0027 (2 HSPs)
scaffold0027 (159-211)||(46655-46707)
scaffold0027 (245-293)||(46731-46778)
[»] scaffold0171 (1 HSPs)
scaffold0171 (136-199)||(23371-23433)
[»] scaffold0022 (1 HSPs)
scaffold0022 (136-211)||(90793-90868)
[»] scaffold0020 (1 HSPs)
scaffold0020 (136-211)||(135346-135421)
[»] scaffold0697 (1 HSPs)
scaffold0697 (178-211)||(1636-1669)
[»] scaffold0450 (1 HSPs)
scaffold0450 (263-291)||(8564-8592)
[»] scaffold0116 (1 HSPs)
scaffold0116 (151-211)||(9863-9923)
[»] scaffold0110 (1 HSPs)
scaffold0110 (179-248)||(28843-28913)
[»] scaffold0021 (1 HSPs)
scaffold0021 (151-211)||(130447-130507)


Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-151; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 38816932 - 38816628
Alignment:
Q  1 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgcttgaattgaagcaataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38816932 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgtttgaattgaagcaataat 38816833  T
Q  101 ttgagaaaatagaataattgaacggtaaccatatactatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||||    
T  38816832 ttgagaaaatagaataattgaacggtaaccatatactatgaagcactaatacggactccg-------cacggatactgacacgccgacaccgctaataat 38816740  T
Q  201 ttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcg 300  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38816739 ttgagaaaatcgctatatttcagtataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcg 38816640  T
Q  301 tgaatcgtgata 312  Q
    ||||||||||||    
T  38816639 tgaatcgtgata 38816628  T

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Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 19820503 - 19820428
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc 19820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 22423895 - 22423764
Alignment:
Q  162 acacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc-ggac 258  Q
    ||||||||||||||||||||| | |||||  ||||||||||||||||||| | ||| |||| ||||||  ||| ||||||||| ||||||||||| ||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcac-ataattcaatataattatatatgtcggtgtcgtgtcggtgtctggac 22423797  T
Q  259 atggctaattcgaggagtgtccgtgcttcatag 291  Q
    | | ||||| |||||||||||||||||||||||    
T  22423796 acgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 22013364 - 22013431
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttg 203  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  22013364 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 42469171 - 42469245
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| | |||||| ||| |||||||||||||| |||||||||||||| | |||||||||||||||||    
T  42469171 ctatgaagcacggacacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaat 42469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 15410532 - 15410483
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaat 15410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 6326384 - 6326332
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  6326384 ccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaat 6326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 259
Target Start/End: Complemental strand, 37328955 - 37328829
Alignment:
Q  134 tactatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--a 231  Q
    |||||||||||||| | |||||| ||| |||||||||||| ||||| || ||||||| || |||||||||  |||||| | | | |||| | |||||  |    
T  37328955 tactatgaagcacggacacggacaccgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcac-aaaattcagtgtaattaca 37328857  T
Q  232 tgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||||||| ||||||||||||||||    
T  37328856 tgtgtcggtgtcgtgtcggtgtcggaca 37328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 15382442 - 15382500
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||| |||||||||||||||| | |||||||||||||| ||||||||||||| ||||    
T  15382442 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 21191143 - 21191090
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||    
T  21191143 ccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatc 21191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 2436878 - 2436939
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttg 203  Q
    |||||||||||| |||||||| |||||||||||||      |||||||||||||||||||||||||||    
T  2436878 ctatgaagcacggatacggacaccggacacgacac------tgacacgccgacaccgctaataatttg 2436939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 21522722 - 21522766
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataattt 202  Q
    |||||||||||||||| |||||||||||||||| |||||||||||    
T  21522722 ccggacacgacacggacactgacacgccgacacagctaataattt 21522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 21533288 - 21533332
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataattt 202  Q
    |||||||||||||||| |||||||||||||||| |||||||||||    
T  21533288 ccggacacgacacggacactgacacgccgacacagctaataattt 21533332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 3966492 - 3966577
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||| ||||||||||||||||||||||||||||| | | | |||| | ||||  ||||||||||||| ||||| ||||||||||    
T  3966492 actgacatgccgacaccgctaataatttgagaaaatcac-acaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 6247572 - 6247647
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||| |||| || ||||| |||||||||| ||| | ||||||||||||||||  |||||||||||| ||||||    
T  6247572 ctatgaaacacggatgcggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatc 6247647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 21137654 - 21137713
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| |||||||| ||||||| ||||||||||||||| || ||||||| |||||||||    
T  21137654 acggacaccggacacaacacggacactgacacgccgacatcggtaataatctgagaaaat 21137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 5873594 - 5873548
Alignment:
Q  164 acgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  5873594 acgacacggacactgacatgccgacacctctaataatttgagaaaat 5873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 36642849 - 36642803
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||    
T  36642849 ccggacacgacacggacactgacacgccgacacagttaataatttga 36642803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 6035472 - 6035505
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaa 208  Q
    ||||||||||||||||||||||||||||||||||    
T  6035472 actgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 293  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
T  8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 14674249 - 14674294
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatc 14674294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 19552626 - 19552577
Alignment:
Q  162 acacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| |||||||||||||||| | ||||||||||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 19552577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 19579673 - 19579726
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| || ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  19579673 ccggatacaacacggacactgatacgccgacacagctaataatttgagaaaatc 19579726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 27144443 - 27144488
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatc 27144488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 30135264 - 30135336
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||  |||||||| | ||||||||||| ||||| |||||||||||||  |||||||||||| ||||    
T  30135264 ctatgaagcacatatacggacac-ggacacgacacagataccgacacgccgacacaactaataatttgaaaaaa 30135336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 34879330 - 34879375
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  34879330 gacacggatacggacacgccggcaccgctaaaaatttgagaaaatc 34879375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 9929668 - 9929720
Alignment:
Q  239 gtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||| |||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  9929668 gtgtcgtgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 13287493 - 13287433
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| ||| ||||| |||||| | ||||||||||| ||||||    
T  13287493 acggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatc 13287433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 17123037 - 17123073
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17123037 actgacacgccaacaccgctaataatttgagaaaatc 17123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 259
Target Start/End: Original strand, 41995436 - 41995543
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 250  Q
    |||||| | ||| ||||||| || ||||||||||||||||  ||||||||| || |||||| | ||| |||| | |||||| |||||||||  || ||||    
T  41995436 acggacactggatacgacacagacactgacacgccgacacaactaataattcgaaaaaatcac-ataattcaatgtaattaagtgtcggtgccgtatcgg 41995534  T
Q  251 tgtcggaca 259  Q
    |||||||||    
T  41995535 tgtcggaca 41995543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 4105229 - 4105280
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    ||||||| ||||||||||||||||||||||||   |||||||||||| ||||    
T  4105229 ccggacatgacacggatactgacacgccgacataactaataatttgaaaaaa 4105280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 11685928 - 11686012
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| || | | ||||  ||||||||||||| || |||||||||||||    
T  11685928 actgacatgccgacaccgctaataatttgagaaagtcgc-ataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggaca 11686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 9449448 - 9449494
Alignment:
Q  165 cgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||||||    
T  9449448 cgacacggacactggcacgccgacaccaataataatttgagaaaatc 9449494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 16304511 - 16304465
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    ||||||||||||  ||||||||||||||||||||||| || ||||||    
T  16304511 ccggacacgacatagatactgacacgccgacaccgctgattatttga 16304465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatagtt 293  Q
    |||||||||||||||||||||||||||||||    
T  24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 26312732 - 26312794
Alignment:
Q  149 atacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| | |||||||||| ||| ||||| | ||||| ||||| |||||||||||||||||    
T  26312732 atacggacactggacacgacatggacactgatatgccgataccgcaaataatttgagaaaatc 26312794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 27932229 - 27932259
Alignment:
Q  180 cacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||||||||||||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaat 27932259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 28588742 - 28588708
Alignment:
Q  177 tgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| ||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatc 28588708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 7175098 - 7175053
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| ||||||||  |||||||| ||||||||||||||||||    
T  7175098 gacacggacactgacacatcgacaccgttaataatttgagaaaatc 7175053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 16203874 - 16203829
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| ||| ||| |||||||| ||||||||||||||||||||    
T  16203874 gacacggacactaacatgccgacactgctaataatttgagaaaatc 16203829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 22299572 - 22299523
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataattt 202  Q
    |||| ||||| |||||||||||| |||||| ||||||| |||||||||||    
T  22299572 ggacaccggatacgacacggatattgacacaccgacacagctaataattt 22299523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 26716097 - 26716169
Alignment:
Q  138 atgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||  |||||||| | ||||||||||  || | ||||| |||||||| ||||||||||||||||||||    
T  26716097 atgaagcaccgatacggacac-ggacacgacatagacattgacatgccgacactgctaataatttgagaaaatc 26716169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 26985837 - 26985909
Alignment:
Q  138 atgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||  |||||||| | ||||||||||  || | ||||| |||||||| ||||||||||||||||||||    
T  26985837 atgaagcaccgatacggacac-ggacacgacatagacattgacatgccgacactgctaataatttgagaaaatc 26985909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 32630840 - 32630770
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| |||||||  ||||| |||||||    | |||||||| ||||||| |||||||||||||||||    
T  32630840 ctatgaagcacggatacggataccggatacgacac----attgacacgctgacaccgataataatttgagaaaat 32630770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 32767004 - 32766975
Alignment:
Q  184 ccgacaccgctaataatttgagaaaatcgc 213  Q
    ||||||||||||||||||||||||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgc 32766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 41633708 - 41633753
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    ||||||| |||| ||||||||||| ||||||| |||||||||||||    
T  41633708 cggacaccacacagatactgacactccgacacagctaataatttga 41633753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 24906388 - 24906336
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||||| | ||||||||||| |||| | ||||||||||| |||||    
T  24906388 ccggacacgacacgaacactgacacgccaacacagataataatttgaaaaaat 24906336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 31084312 - 31084348
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  31084312 actgacacgccgacacagctaataatttgaaaaaatc 31084348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 6e-25; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 27944991 - 27945065
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaat 27945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| ||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  24105629 ctatgaagcacggatacgga-tacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 11722185 - 11722132
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  11722185 ccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatc 11722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 24339605 - 24339716
Alignment:
Q  149 atacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtg 246  Q
    |||||||| |||||||||||| ||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||    
T  24339605 atacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtg 24339703  T
Q  247 tcggtgtcggaca 259  Q
    |||||||||||||    
T  24339704 tcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 19206025 - 19206107
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 242  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||| | ||| |||||||||||  |||||||||||||    
T  19206025 gacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcac-ataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 29787435 - 29787354
Alignment:
Q  179 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatg 261  Q
    ||||||||||||||||||||||||||||||||| | ||| |||| | ||||||||||| |||||  ||||||||| |||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 1433419 - 1433479
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||| |||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  1433419 acggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatc 1433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 291
Target Start/End: Complemental strand, 7328805 - 7328639
Alignment:
Q  131 atatactatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat- 229  Q
    ||||||||||||||||| |||||||| ||| ||||||||| || | | ||||| ||| || |||||||||||||||||||  | ||| || | | ||||     
T  7328805 atatactatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataac-ataatttagtgtaatt 7328707  T
Q  230 -tatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
     ||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| ||||||||||||    
T  7328706 atatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgcttcatag 7328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 2034392 - 2034462
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaa 207  Q
    |||||||||||| ||||||| | | ||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  2034392 ctatgaagcacggatacgga-tactgacacgacacggatacttacacgtcgacaccactaataatttgagaa 2034462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 2425818 - 2425767
Alignment:
Q  160 ggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  2425818 ggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatc 2425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 32308109 - 32308194
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||| | ||||  |||||||| |||| |||||||||| |||||    
T  32308109 actgacacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 43027578 - 43027503
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| || ||||| | |||||||||||||| ||||||||| |||| | ||||||||||||| ||||||    
T  43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatc 43027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 43249958 - 43250017
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| ||||||| |||||||| |||||||||||||||| | |||||||||||||||||    
T  43249958 acggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaat 43250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 26733279 - 26733329
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatc 26733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 11700798 - 11700909
Alignment:
Q  181 acgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg--acatggctaattcgaggagtgt 278  Q
    |||| ||||||| ||||||||||| |||||| | ||| |||| | |||||||||||| |||| || ||||||||||  ||| ||||||| ||||||||||    
T  11700798 acgctgacaccgttaataatttgacaaaatcac-ataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgt 11700896  T
Q  279 ccgtgcttcatag 291  Q
    || || |||||||    
T  11700897 ccctgattcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 49107795 - 49107844
Alignment:
Q  160 ggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa 49107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 22484004 - 22484082
Alignment:
Q  165 cgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 242  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| || ||| |||| ||||||  |||||||||||||    
T  22484004 cgacacagacactgacacgccgacaccgctaataattttagaaaattgc-ataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 30731002 - 30731104
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 250  Q
    |||||| || ||||||||||  | | || |||||||||||||| ||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||| ||    
T  30731002 acggacaccagacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcac-ataattcagtgtaattgtgtgtcggtgtcgtgttgg 30731100  T
Q  251 tgtc 254  Q
    ||||    
T  30731101 tgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 598160 - 598233
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||  |||||| || |||| |||||||| ||||||||  |||||||||||||||||| ||||||||    
T  598160 tatgaagcacgac-acggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatc 598233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 5235960 - 5236010
Alignment:
Q  160 ggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||| || ||||||||| |||||||||||||||||| |||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaat 5236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 8046103 - 8046061
Alignment:
Q  169 acggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  8046103 acggatactgacacgccaacaccactaataatttgagaaaatc 8046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 23191879 - 23191921
Alignment:
Q  169 acggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatc 23191921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 26329476 - 26329418
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||| | ||||||||||| || ||||||||||||||| || ||||||||||||||||    
T  26329476 acggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaa 26329418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 4017879 - 4017830
Alignment:
Q  160 ggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||||| || ||||||||||||| | ||||||||||||||||    
T  4017879 ggacacgacacggacaccgacacgccgacacggataataatttgagaaaa 4017830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 11072290 - 11072362
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt 251  Q
    ||||||||||||||| ||||||||||| ||||    |||| |||| ||||||||||||||||||| ||||||||    
T  11072290 gacacgccgacaccgataataatttgaaaaaaata-tataattcaatataattatgtgtcggtgtcgtgtcggt 11072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 11061162 - 11061110
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| |||||||||| |||||||| ||||||| ||||||||||||| ||||||    
T  11061162 cggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatc 11061110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 17851396 - 17851456
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||| |||||| |||||  ||| |||||||||||||| ||||||||    
T  17851396 acggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatc 17851456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 20549780 - 20549816
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20549780 actgacacaccgacaccgctaataatttgagaaaatc 20549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 21828483 - 21828439
Alignment:
Q  167 acacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||| |||||||||||||||||| || |||||||||||||||    
T  21828483 acacggacactgacacgccgacaccgttagtaatttgagaaaatc 21828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 22868015 - 22868067
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||| |||| || ||||||||||||||||| |||||||| ||||||||||    
T  22868015 cggacacaacaccgacactgacacgccgacaccactaataatatgagaaaatc 22868067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 2948669 - 2948708
Alignment:
Q  172 gatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  2948669 gatactgacacgccgacaccgctgataattttagaaaatc 2948708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 259
Target Start/End: Complemental strand, 6630982 - 6630897
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||||||||||||| |||||||||||||||| || || || |||| | ||||  ||||||||| ||| |||| |||||||||||    
T  6630982 actgacacgccgacaccactaataatttgagaaagtcact-taattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggaca 6630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 13770664 - 13770707
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataattt 202  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||    
T  13770664 cggacacgacacggacactgatacgccgacacagctaataattt 13770707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 15902795 - 15902896
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcgg 256  Q
    |||||||||||| || ||||||| |||||||||  ||||||||||| |||||| | ||| || | | ||||  ||||||||||||| |||||||| ||||    
T  15902795 cggacacgacacagacactgacatgccgacaccaataataatttgataaaatcac-ataatttagtgtaattatatgtgtcggtgttgtgtcggtatcgg 15902893  T
Q  257 aca 259  Q
    |||    
T  15902894 aca 15902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 210
Target Start/End: Original strand, 28155563 - 28155594
Alignment:
Q  179 acacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaat 28155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 9933282 - 9933347
Alignment:
Q  193 ctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    |||||||||||| |||||| | |||||||| || | ||||||||| |||| ||||||||||||||||    
T  9933282 ctaataatttgaaaaaatcac-atatttcagtaaacttatgtgtcagtgtcgtgtcggtgtcggaca 9933347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 20545312 - 20545270
Alignment:
Q  169 acggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  20545312 acggatacggacacgccaacaccgctaataatttgaaaaaatc 20545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 25791633 - 25791675
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaa 208  Q
    ||||| || ||||||||||||||||||||||| ||||||||||    
T  25791633 gacacagacactgacacgccgacaccgctaattatttgagaaa 25791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatagt 292  Q
    ||||||||||||||||||||||||||||||    
T  17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 21864756 - 21864829
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||| ||||  ||  ||||||||||||||| || ||||| | ||||| ||||||||||||| ||||    
T  21864756 ctatgaagcacggatacacacatcggacacgacacggacacggacacacggacacagctaataatttgaaaaaa 21864829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 26019710 - 26019669
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaa 207  Q
    ||||||||| ||||||||||| |||||||| |||||||||||    
T  26019710 gacacggatcctgacacgccggcaccgctagtaatttgagaa 26019669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 10042915 - 10042955
Alignment:
Q  164 acgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||| ||| ||||||||||||| ||||||||||||    
T  10042915 acgacacggacacttacacgccgacaccactaataatttga 10042955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 291
Target Start/End: Original strand, 15680900 - 15680928
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||||||||||||||||    
T  15680900 ctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 21141076 - 21141016
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||| ||||||||||||  | |||||| ||||||| |||||||||| ||||||||    
T  21141076 acggacaccgtacacgacacggacgccgacacgtcgacaccactaataatttaagaaaatc 21141016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 25481875 - 25481927
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||| ||| ||| | |||||||||||||| ||||||||||||| ||||||    
T  25481875 cggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatc 25481927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 33994162 - 33994214
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgac 188  Q
    |||||||||||| |||||||| |  ||||||||||| | ||||||||||||||    
T  33994162 ctatgaagcacggatacggacacttgacacgacacgaacactgacacgccgac 33994214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 10294079 - 10294181
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 255  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||| |||||| |||||||| | ||||  ||||||||||||| |||| |||||||    
T  10294079 ccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgc-atatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcg 10294177  T
Q  256 gaca 259  Q
    ||||    
T  10294178 gaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 9027143 - 9027203
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  9027143 acggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatc 9027203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 853968 - 853893
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||  |||||||||||| ||||||    
T  853968 ctatgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatc 853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 259
Target Start/End: Original strand, 16766662 - 16766771
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 248  Q
    |||||| |||||||||||| ||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||||    
T  16766662 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T
Q  249 ggtgtcggaca 259  Q
    |||||||||||    
T  16766761 ggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 5000720 - 5000660
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  5000720 acggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatc 5000660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 291
Target Start/End: Complemental strand, 5732604 - 5732474
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 250  Q
    |||||| | |||||||||| ||| |||||||||||||||||| |||||||||||||||||| | |||||| | | ||||||| |         |||||||    
T  5732604 acggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcac-atattttagtgtaattatat---------gtgtcgg 5732515  T
Q  251 tgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||| | ||||| |||||||||||| ||||||||||    
T  5732514 tgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 8365628 - 8365560
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||||| |||||||| || ||||||||||||| ||||||||||||||||  ||||||||||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttga 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 12696277 - 12696348
Alignment:
Q  138 atgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 12696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 291
Target Start/End: Complemental strand, 8805656 - 8805524
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg---tgtcgga 257  Q
    |||||||||| || || |||||| || ||| |||||||||||||||||||| | ||| || | | ||||||||||||||||| ||||| |    || |||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcac-ataatttagtgtaattatgtgtcggtgtagtgtcagacacgtggga 8805558  T
Q  258 catggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||| ||||| |||||||||||||||||||||||    
T  8805557 catgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 9107464 - 9107355
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 248  Q
    |||||| |||||||||||||||| ||| |||||||||||| ||||||||||||| |||||| | | | |||| | |||||  | |||||||||| |||||    
T  9107464 acggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T
Q  249 ggtgtcggaca 259  Q
    |||||||||||    
T  9107365 ggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 9629357 - 9629408
Alignment:
Q  160 ggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatc 9629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 30866253 - 30866178
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||||||| ||||||| ||||| || || ||||| || |||||||||||||||||||||||||    
T  30866253 ctatgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatc 30866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 6389693 - 6389767
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| | || ||| |||||||||||||||| ||| |||||||||||| | |||||||||||||||||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaat 6389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 9658854 - 9658904
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatc 9658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 3398569 - 3398637
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||| | ||||||||  || |||||||||||| |||||||||||||||| |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga 3398637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 7938081 - 7938141
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||| ||| |||||||||||||||| ||||||||||||| ||||||    
T  7938081 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatc 7938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  162 acacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 7977924 - 7977865
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| | |||||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  7977924 acggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaat 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 19040339 - 19040377
Alignment:
Q  173 atactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatc 19040377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 34073441 - 34073337
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 248  Q
    |||||| | |||||||||||||| ||||||| ||| ||| ||||||||||||||||||||| | ||| |||| | ||||  |||| |||||||| |||||    
T  34073441 acggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctc-ataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T
Q  249 ggtgtc 254  Q
    ||||||    
T  34073342 ggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 426601 - 426548
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||| ||||||    
T  426601 ccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 20371189 - 20371144
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| | |||||||||||||||||||||||||||||||||||    
T  20371189 gacacggacattgacacgccgacaccgctaataatttgagaaaatc 20371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 8777059 - 8777007
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||| ||||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 8777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 34595099 - 34595159
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| | ||||||||||||||  |||||||||||| ||||||    
T  34595099 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatc 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 31579311 - 31579229
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 242  Q
    ||||||||||| ||| |||| ||| || |||||| |||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  31579311 cggacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcac-ataattcagtgtaattatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 25038180 - 25038106
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| ||||||||   | | ||||||| ||||||||||||  ||||||| |||||||||||||||||    
T  25038180 ctatgaagcacggatacggacattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaat 25038106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 31959111 - 31959184
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||||||| | ||||| |||||| | |||||||||||| ||| ||||||||||||| ||||||    
T  31959111 tatgaagcacggatacggacac-ggacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatc 31959184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 7265668 - 7265627
Alignment:
Q  170 cggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatc 7265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 17841668 - 17841623
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatc 17841623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 4877890 - 4877965
Alignment:
Q  136 ctatgaagcacgaatacggactc--cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||  |||||||| |  || |||||||||||||| |||||| ||||||| ||||||||||||| ||||    
T  4877890 ctatgaagcacagatacggacacgccgaacacgacacggatagtgacacaccgacacagctaataatttgaaaaaa 4877965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 16833281 - 16833333
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| || ||||||||||||||||  |||||||||||| ||||||    
T  16833281 cggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatc 16833333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 17341746 - 17341698
Alignment:
Q  163 cacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||  |||||||||||||||||| ||||||||||| ||||||    
T  17341746 cacgacacgggcactgacacgccgacaccgttaataatttgataaaatc 17341698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 2117050 - 2117175
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggac 258  Q
    ||||||||||||| |||| ||||| |||||||| |||||||||||| |||||| | ||| |||| |  ||||||  ||    || |||||| ||||||||    
T  2117050 cggacacgacacg-atacggacactccgacacctctaataatttgaaaaaatcac-ataattcaatgcaattataagt----gtcgtgtcg-tgtcggac 2117142  T
Q  259 atggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||| |||||  ||||||||||||||||||||||    
T  2117143 atgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 7996487 - 7996412
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||  |||| ||| | | ||| |||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  7996487 ctatgaagcacagatacagacacagtacatgacaaggacactgacatgccgacactgctaataatttgagaaaatc 7996412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 8022314 - 8022389
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||  |||| ||| | | ||| |||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  8022314 ctatgaagcacagatacagacacagtacatgacaaggacactgacatgccgacactgctaataatttgagaaaatc 8022389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 10339211 - 10339160
Alignment:
Q  160 ggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||| | | ||||||||||||||||||| | |||||||||||||||    
T  10339211 ggacacgacatgaacactgacacgccgacaccgcgattaatttgagaaaatc 10339160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 3209347 - 3209404
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||| |||||||||||||| | || ||||||||||||| ||||||||||||| ||||    
T  3209347 acggacaccggacacgacacg-acacagacacgccgacacagctaataatttgaaaaaa 3209404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 10649278 - 10649352
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| |||||||| ||||| |||||||  | | ||| |||||||||||| || |||||||| |||||    
T  10649278 ctatgaagcacggatacggacaccggatacgacacaaacaatgatacgccgacaccgttagtaatttgataaaat 10649352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 20518295 - 20518369
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| |||||||  ||||| ||||||| || |||||||| |  ||||| |||| |||||||||||||    
T  20518295 ctatgaagcacggatacggatgccggatacgacacagacactgacacactaacaccactaacaatttgagaaaat 20518369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatagtt 293  Q
    |||||||||||||||||||||||||||||||    
T  34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 10842524 - 10842557
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||||||||||||| ||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatc 10842557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 677826 - 677862
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| | ||||||||||||||||||    
T  677826 actgacacgccgacactgttaataatttgagaaaatc 677862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 10770760 - 10770708
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| ||| ||||||||||| ||||  |||||||||||| ||||||    
T  10770760 cggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatc 10770708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 18803597 - 18803549
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaa 207  Q
    ||||||||||||  | ||||||| ||||||||||||||||||| |||||    
T  18803597 cggacacgacacaaacactgacatgccgacaccgctaataattcgagaa 18803549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 21395374 - 21395342
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||| ||||||||||||||||||||||||    
T  21395374 gacacgccaacaccgctaataatttgagaaaat 21395342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 21424872 - 21424836
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  21424872 actgacacgccaacaccgctaataatttgaaaaaatc 21424836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 26562681 - 26562759
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 255  Q
    ||||||||||||| ||||| |||||||||||||| | ||| |||| | ||||  ||||||||| ||| ||||||||||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcac-ataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 33001375 - 33001323
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||| ||||||  | |||||||||||||| ||||||||||||| ||||||    
T  33001375 cggacacaacacggtcaatgacacgccgacactgctaataatttgaaaaaatc 33001323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 34172167 - 34172218
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||  ||||||||| ||||||||| |||| ||||||||||||||    
T  34172167 cggacacgacaca-atactgacatgccgacacctctaacaatttgagaaaatc 34172218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 259
Target Start/End: Complemental strand, 34290147 - 34290064
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||| ||||||||  ||||||||||| || |||| | ||| |||| | ||||||||||||||||| ||||| ||||| ||||    
T  34290147 actgacatgccgacacaactaataatttgcgagaatcac-ataattcagtgtaattatgtgtcggtgtcgtgtcagtgtccgaca 34290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 22651948 - 22652050
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 255  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| |||||||  | |||||||||| ||||||||||||    
T  22651948 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcaatataattacaagtgtcggtgtcgtgtcggtgtcg 22652046  T
Q  256 gaca 259  Q
    ||||    
T  22652047 gaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 29510396 - 29510289
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcgg 250  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||||||| |||||| | | | |||| |||||||  | |||||||||| |||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtataattacaagtgtcggtgtagtgtcgg 29510298  T
Q  251 tgtcggaca 259  Q
    |||||||||    
T  29510297 tgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 25192456 - 25192388
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||||||||||||||  ||||||||| ||||| |||||||||||||||| |||||||||||||    
T  25192456 ctatgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttga 25192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 926888 - 926822
Alignment:
Q  145 acgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| |||||| |||||||||||||||| ||||||||||| ||||  |||||||||||||||||||    
T  926888 acgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 27213519 - 27213572
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  27213519 ccggacacgacacggatacagacacgccgacactgctaataatttcagaaaatc 27213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 126457 - 126390
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||||| ||||| || | |||||||| ||||||||||||||||| ||||||||||||||||||    
T  126457 ctatgaagcacggatacgcacac-ggacacgatacggatactgacacgccaacaccgctaataatttga 126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 13437073 - 13436998
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| | | |||| ||||||| |||| ||| |||||||||||||||| ||||||||||||| ||||||    
T  13437073 ctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatc 13436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 24362298 - 24362236
Alignment:
Q  149 atacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| ||||| ||||||| || || ||||||||||||||||||||||||||||| ||||    
T  24362298 atacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatc 24362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 31109597 - 31109552
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  31109597 gacacggacactgacacgccgacaccgttaataatttgagaaaatc 31109552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 4298994 - 4298920
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| ||| |||| | ||||||||||| |||||| |||||||||||| | ||||||||||| ||||||    
T  4298994 ctatgaagcacggatatggacac-ggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatc 4298920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 11944615 - 11944690
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||  |||||||| ||  ||||||||||||| || |||||||||||| | ||||||||||| ||||||    
T  11944615 ctatgaagcacagatacggacaccaaacacgacacggatgctaacacgccgacactgttaataatttgataaaatc 11944690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 37283894 - 37283812
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtgg 244  Q
    |||| |||||||| ||||||| || | ||||||||||||| |||||||||| | ||| |||| | |||||||||||||||||||    
T  37283894 gacatgacacggacactgacatgcgggcaccgctaataatctgagaaaatcac-ataattcagtgtaattatgtgtcggtgtgg 37283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 4673521 - 4673459
Alignment:
Q  149 atacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||  |||||||||||| || |||||||||||||||| | ||||||||||| ||||||    
T  4673521 atacggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatc 4673459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 11927195 - 11927076
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatg 233  Q
    |||||||||||  |||||||| ||  ||||||||||||| || | |||||||||| | ||||||||||| |||||| | ||| |||| | ||||  ||||    
T  11927195 ctatgaagcacagatacggacaccaaacacgacacggatgctaatacgccgacactgttaataatttgataaaatcac-ataattcagtgtaattatatg 11927097  T
Q  234 tgtcggtgtggtgtcggtgtc 254  Q
    ||||||||| |||| ||||||    
T  11927096 tgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 31236656 - 31236611
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||||    
T  31236656 gacaaggatacggacacgccgacactgctaataatttgagaaaatc 31236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 39954346 - 39954313
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||||||||||||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatc 39954313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 2572150 - 2572090
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| | ||||||||||||||||| |||||| ||||||  |||||||||||| ||||||    
T  2572150 acggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatc 2572090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 20873042 - 20873094
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| |||||||||||||||  | ||||||||||| ||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatc 20873094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 29776013 - 29776108
Alignment:
Q  163 cacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||||||| | ||||| | |||||| |||||||||||||||||||| |  || |||| ||||||||| |||||||||   ||| ||||||||||    
T  29776013 cacgacacggacattgacaagtcgacactgctaataatttgagaaaatcac-gtaattcagtataattatatgtcggtgttaagtcagtgtcggaca 29776108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 24669406 - 24669457
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| || |||||||||| ||||||| |||||||||||| ||||    
T  24669406 cggacacgacacagacactgacacgctgacaccgttaataatttgaggaaat 24669457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 31556948 - 31557015
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    ||||||| ||| |||||||| ||||||| |||| ||  |||||||||||||||| | |||||||||||    
T  31556948 tatgaagtacggatacggacaccggacatgacatggtcactgacacgccgacacagttaataatttga 31557015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 40332154 - 40332197
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactg 178  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||    
T  40332154 actatgaagcacggatacggacaccggacacgacacggacactg 40332197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 44067481 - 44067540
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| || ||||| |||| || |||||||||||||||| | |||||||||||||||||    
T  44067481 acggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaat 44067540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 27101506 - 27101540
Alignment:
Q  177 tgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||||||||||||||| ||||||    
T  27101506 tgacacgccgacaccgctaataatttgaaaaaatc 27101540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 34897068 - 34897110
Alignment:
Q  169 acggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatc 34897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 36934646 - 36934715
Alignment:
Q  162 acacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 232  Q
    |||||||||||| ||| ||||| ||||||||||||||||| || |||||| | ||| |||||| |||||||    
T  36934646 acacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcac-ataattcattgtaattat 36934715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 13844663 - 13844630
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| ||||||||||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatc 13844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 22197836 - 22197783
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||| ||||||||||||| || ||| ||||||| |||| |||||||||||||    
T  22197836 acggacaccggacacgacacagacactaacacgccaacacagctaataatttga 22197783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 36450833 - 36450788
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| ||||||||||||||||  |||||||||||| ||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatc 36450788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 17751651 - 17751699
Alignment:
Q  162 acacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||| ||||||| |||||||||||||||||| || |||||| |||||||    
T  17751651 acacaacacggacactgacacgccgacaccggtagtaatttcagaaaat 17751699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 17760638 - 17760686
Alignment:
Q  162 acacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||| ||||||| |||||||||||||||||| || |||||| |||||||    
T  17760638 acacaacacggacactgacacgccgacaccggtagtaatttcagaaaat 17760686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 28642358 - 28642426
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||||| ||||||||  ||||||||||||||| | ||||||   ||||| | |||||||||||    
T  28642358 ctatgaagcacggatacggacatcggacacgacacggacaatgacacattgacacggttaataatttga 28642426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 28745448 - 28745516
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    ||||||| |||| ||||| ||  ||||||||||||||||| ||| ||  |||||| |||||||||||||    
T  28745448 ctatgaaacacggatacgaacgtcggacacgacacggataatgatacatcgacactgctaataatttga 28745516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 21782927 - 21782817
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 235  Q
    ||||||||||||||||| ||| | |||||||||||  | |||||||||||||||| |||||||||||||||||||| | ||| |||| | ||||||||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcac-ataattcagtgtaattatgtg 21782829  T
Q  236 tcggtgtggtgt 247  Q
     |||||| ||||    
T  21782828 ccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 33519736 - 33519800
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataat 200  Q
    |||||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  33519736 ctatgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaataat 33519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 20539783 - 20539708
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| |||||||| | |||||||||||||| ||||||||| |||||| ||||||||||||| ||||||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatc 20539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 21616737 - 21616787
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatc 21616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 19536507 - 19536434
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||  |||||||| |||||||||||||||| | ||||||||||||||  |||||||||||| ||||    
T  19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 23717976 - 23718048
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaa 208  Q
    ||||||||||||| |||| ||| | ||||| |||||||| |||||||| |||||||||||||||||||||||||    
T  23717976 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 23718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 24105648 - 24105720
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaa 208  Q
    ||||||||||||| |||| ||| | ||||| |||||||| |||||||| |||||||||||||||||||||||||    
T  24105648 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 24105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 36409711 - 36409614
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||| || | | |||||||||||||||||  ||| |||||| ||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcac-ataatttagtgtaattatgtgtcggtgtcatgttggtgtctgaca 36409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 18276486 - 18276570
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 236  Q
    |||||| |||||||||| || || ||||| | ||||||||||||||||||||||||||||| || || |||| | |||||||||||    
T  18276486 acggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcact-taattcagtgtaattatgtgt 18276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 21624217 - 21624282
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataattt 202  Q
    |||||||| || |||||||| ||| ||||||||| || |||||||||||||||| |||||||||||    
T  21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 4332891 - 4332981
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 242  Q
    |||||| ||||||||| ||| |||||| ||| |||||||| | |||||||||| ||||||| | ||| |||| | |||||||||||||||||    
T  4332891 acggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcac-ataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 38117261 - 38117193
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||||||| |||||||||||||      |||||||||||||| ||||||||||||| ||||||    
T  38117261 tatgaagcacggatacggacaccggacacgacac------tgacacgccgacacagctaataatttgaaaaaatc 38117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 1327976 - 1328033
Alignment:
Q  184 ccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 242  Q
    ||||||||||||||||||||||||||||  || | |||| |||||||||||||||||||    
T  1327976 ccgacaccgctaataatttgagaaaatc-ataaaattcagtataattatgtgtcggtgt 1328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 14996333 - 14996260
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    ||||||||||||| |||||||| | | ||| |||||||| ||||||| |||||||| ||||||||||||| ||||    
T  14996333 actatgaagcacggatacggacgcag-acatgacacggacactgacaagccgacacagctaataatttgaaaaaa 14996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 21374810 - 21374734
Alignment:
Q  135 actatgaagcacgaatacggactccggacac--gacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||| |||||||| | ||||||  |||||||| ||| |||||||||||| ||||||||||||| |||||    
T  21374810 actatgaagcacggatacggacac-ggacaccggacacggacactaacacgccgacacagctaataatttgaaaaaat 21374734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 28412315 - 28412404
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtg 241  Q
    |||||| || ||||||||||||| ||| ||||| | |||||| ||||||||||| |||||| | ||| |||| | ||||||||||||||||    
T  28412315 acggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcac-ataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 31018557 - 31018615
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| ||||| |||||| ||| ||||||||||| |||||||||||||||| ||||||||    
T  31018557 ggacaccggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatc 31018615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 2331743 - 2331863
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgt 234  Q
    ||||||||||||| | || |||  || || ||||||||| | ||||||||  |||||  |||||||||||||||||| | ||| |||| | || ||||||    
T  2331743 actatgaagcacggacacagacatcgaacgcgacacggacattgacacgcaaacaccattaataatttgagaaaatcac-ataattcagtgtatttatgt 2331841  T
Q  235 gtcggtgtggtgtcggtgtcgg 256  Q
    |||||||| ||||| |||||||    
T  2331842 gtcggtgtcgtgtcagtgtcgg 2331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 4142936 - 4142875
Alignment:
Q  149 atacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||| ||| ||||||| |||| ||||||||||||||||| |||| ||||| |||||||    
T  4142936 atacggacaccgaacacgacccggacactgacacgccgacaccactaacaatttaagaaaat 4142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 18420528 - 18420417
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 248  Q
    |||||| ||| |||||| ||  ||||||||||||| |||| |||||||||||||||||||| | ||| |||| |  ||||||  |||||||||| |||||    
T  18420528 acggacaccgaacacgagacatatactgacacgccaacactgctaataatttgagaaaatcac-ataattcaatgcaattataagtgtcggtgttgtgtc 18420430  T
Q  249 ggtgtcggacatg 261  Q
      |||||||||||    
T  18420429 catgtcggacatg 18420417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 10535842 - 10535794
Alignment:
Q  162 acacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||| |||||| | |||||||||||| |||||||||||||||||    
T  10535842 acacgacacagatactaatacgccgacaccgataataatttgagaaaat 10535794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 19573970 - 19574078
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtg 277  Q
    ||||||||||||||| ||||||||| |||||||  | ||| |||| | |||||||     ||||  ||||||||||||||||   |||||||||||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataac-ataattcagtgtaattata----ggtggcgtgtcggtgtcggacacacctaattcgaggagtg 19574064  T
Q  278 tccgtgcttcatag 291  Q
    ||| ||||||||||    
T  19574065 tccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 30404936 - 30404884
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||| |||||||||||||||| | ||||||||||| ||||||    
T  30404936 cggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatc 30404884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 31284013 - 31284073
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||  ||||| | ||| |||||||||||| ||||||||||||||||||||    
T  31284013 acggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatc 31284073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 44860320 - 44860394
Alignment:
Q  186 gacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||  ||||||||||||| |||| ||||| |||||    
T  44860320 gacaccgctaataatttgagaaaatcgc-ataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 896180 - 896236
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| |||||||||||||  | |||||||||||||||| ||||||| ||||||||||||    
T  896180 ggacaccggacacgacac--acactgacacgccgacactgctaatagtttgagaaaatc 896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 21091696 - 21091747
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||| | ||||| |||||||| ||||||||||||||||||| |||||||    
T  21091696 cggacacaagacggacactgacacaccgacaccgctaataatttaagaaaat 21091747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 37411313 - 37411278
Alignment:
Q  176 ctgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||||||||||||||||    
T  37411313 ctgacatgccgacaccgctaataatttgagaaaatc 37411278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 2423820 - 2423894
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||||||| || ||||||| | |||  | |||||||||||  |||||| ||||||||||||||    
T  2423820 tatgaagcacggatacggacaccagacacgataaggacgcggacacgccgacgacgctaaaaatttgagaaaatc 2423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 6940233 - 6940271
Alignment:
Q  164 acgacacggatactgacacgccgacaccgctaataattt 202  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  6940233 acgacacggacactgacacgccgacacagctaataattt 6940271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 290  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 18589171 - 18589213
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatt 201  Q
    |||||| |||||||||||| |||||||||||| ||||||||||    
T  18589171 cggacatgacacggatactaacacgccgacactgctaataatt 18589213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 23354753 - 23354687
Alignment:
Q  144 cacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| |||||| ||||||| |||||||| || |||| || ||||| | |||||||||||||||||    
T  23354753 cacgaacacggacaccggacatgacacggacaccgacatgctgacacagataataatttgagaaaat 23354687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 290  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 290  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 16069333 - 16069288
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||||||||||||| ||||||||| | ||||||    
T  16069333 gacacggacactgacacgccgacaccgttaataatttaaaaaaatc 16069288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 31727837 - 31727882
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| ||||||||||||| |||||  |||||||||||||||||||    
T  31727837 gacacagatactgacacgctgacactactaataatttgagaaaatc 31727882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 37558957 - 37558994
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttg 203  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttg 37558994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 41942060 - 41942129
Alignment:
Q  141 aagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||| |||||||| || || ||||||| || |||||||||| | ||||| ||| |||||||||||||    
T  41942060 aagcacggatacggacgcctgatacgacacagacactgacacgcagtcaccgttaaaaatttgagaaaat 41942129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 24894370 - 24894414
Alignment:
Q  167 acacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||| |||||||||||||||| ||||||||||| | ||||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatc 24894414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 39323244 - 39323288
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||| ||||| ||| |||||||||||||||||||| |||||    
T  39323244 gacacggacactgaaacgtcgacaccgctaataatttgacaaaat 39323288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 42511358 - 42511322
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42511358 ggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 42832343 - 42832311
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||| |||||||||||||||||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaat 42832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 13349 - 13425
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| |||||||| ||||| | |||||||| ||||||||||||||||  |||||||||||||||||||    
T  13349 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 13425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 291
Target Start/End: Original strand, 20122 - 20279
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atg 233  Q
    |||||||||||  |||||||| |||||||||||||||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |    
T  20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaag 20220  T
Q  234 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 291  Q
    |||| |||| |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
T  20221 tgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 21978 - 21902
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| |||||||| ||||| | |||||||| ||||||||||||||||  |||||||||||||||||||    
T  21978 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 21902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 40917716 - 40917776
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  40917716 acggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc 40917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 398858 - 398799
Alignment:
Q  152 cggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatc 398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 2896207 - 2896155
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatc 2896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 290
Target Start/End: Complemental strand, 10572690 - 10572535
Alignment:
Q  144 cacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtg 241  Q
    |||| |||||||| |||||||||||| | | ||||||||||||||||| ||||||||||||||||||| | ||| |||  | |||||  |||||||||||    
T  10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcac-ataattcggtgtaattaaatgtgtcggtg 10572592  T
Q  242 tggtgtcggtgtc--------ggacatggctaattcgaggagtgtccgtgcttcata 290  Q
    | |||| ||||||        ||||| | ||||||| ||||||||||||||||||||    
T  10572591 ttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 5376609 - 5376535
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||| ||||| |||| || ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  5376609 actatgaggcacgtatacaga-tccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaat 5376535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 5927449 - 5927374
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| ||||||| |||||||| |||||||||||||||| ||||||||||  |||| ||||||||||||| ||||||    
T  5927449 ctattaagcacggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatc 5927374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 6427323 - 6427375
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatc 6427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 1486796 - 1486703
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 250  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||| | ||| |||| | |||||||  |||||||||| |||||||    
T  1486796 ccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcac-ataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 38503285 - 38503386
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 248  Q
    |||||| | ||||| |||||||| ||| |||| ||||||||||||||||||||||||||||  ||||||||| | ||||  |||||||||||||  ||||    
T  38503285 acggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatc-atatatttcagtgtaattatatgtgtcggtgtcctgtc 38503383  T
Q  249 ggt 251  Q
    |||    
T  38503384 ggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 48040558 - 48040503
Alignment:
Q  149 atacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||| |||||||||||||||| |||||||||||||||| | |||||||||||    
T  48040558 atacggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 1262856 - 1262933
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 236  Q
    |||||||||||||| | || ||||||||||||| |||||||||||||||||||| | ||| |||| |||||||| ||||    
T  1262856 ccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcac-ataattcaatataattaagtgt 1262933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 9709795 - 9709845
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatc 9709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 34298411 - 34298461
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatc 34298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 39130876 - 39130802
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| |||||||| |||||||||||| ||||| |||||||| |||||   ||||||||| |||||||    
T  39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaat 39130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 48547991 - 48547938
Alignment:
Q  238 ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  48547991 ggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 17831601 - 17831565
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831601 actgacacgccgacaccgctaataatttgagaaaatc 17831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 36878450 - 36878486
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878450 actgacacgccgacaccgctaataatttgagaaaatc 36878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 12443537 - 12443494
Alignment:
Q  168 cacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  12443537 cacggatacggacacgccgacacagctaataatttgagaaaatc 12443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 31014993 - 31015068
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| | || ||| |||| ||||||||||  |||||| |||| |||| ||||||||||||||||||||    
T  31014993 ctatgaagcacggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatc 31015068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 44482234 - 44482343
Alignment:
Q  190 ccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg-----gctaattcgaggagtgtccgt 282  Q
    ||||| |||||||||||||||| | ||| |||| | |||||||  |||||||||| |||||||||||||||| |     |||||| ||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcac-ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacagctaatccgaggagtgtccgt 44482332  T
Q  283 gcttcatagtt 293  Q
    ||| |||||||    
T  44482333 gctccatagtt 44482343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 48450673 - 48450622
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||| |||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaat 48450622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 15641130 - 15641064
Alignment:
Q  145 acgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| ||||||  |||||| |||||||| ||||||| |||||||| ||||||||||| ||||||||    
T  15641130 acgaacacggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatc 15641064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 19562716 - 19562655
Alignment:
Q  149 atacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| ||| |||||||| ||||| | |||||||||||||||| ||||||||||||||||||||    
T  19562716 atacagacaccggacac-acacgaacactgacacgccgacactgctaataatttgagaaaatc 19562655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 6415080 - 6415035
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||    
T  6415080 gacacggacactgacacgccgacatcgctaattatttgagaaaatc 6415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 20157437 - 20157384
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||  ||||||||  |||||||||||||||| ||||||||||    
T  20157437 ccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatc 20157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 41877554 - 41877505
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||| || ||||  ||||||||||||||||||||||||||||||    
T  41877554 gacacgacacagacactggtacgccgacaccgctaataatttgagaaaat 41877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 46348462 - 46348417
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatc 46348417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 10577829 - 10577769
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| || ||||||||||||| ||||||  ||| ||||||||    
T  10577829 acggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatc 10577769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 34315663 - 34315722
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaa 196  Q
    |||||||||||| ||||||| |  |||||||||||||||||||||| |||||||| |||||    
T  34315663 ctatgaagcacggatacgga-tatggacacgacacggatactgacatgccgacacagctaa 34315722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 609544 - 609493
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||   | ||||||||||||||||| ||||||||||||||||||    
T  609544 cggacacgacatcaacactgacacgccgacaccactaataatttgagaaaat 609493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 9630689 - 9630634
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacacc 191  Q
    |||||||||||| |||| ||| || ||||| ||||||| |||||||||||||||||    
T  9630689 ctatgaagcacggatacagacaccagacacaacacggacactgacacgccgacacc 9630634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 21378520 - 21378602
Alignment:
Q  127 aaccatatactatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||||||||||| |||| || |  |||||||||||||| |  ||||| ||||||| |||||||| |||| |||||    
T  21378520 aaccatatactatgaagcacggatacaga-tatggacacgacacggacatggacacaccgacacagctaataaattgaaaaaat 21378602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 2851000 - 2851045
Alignment:
Q  164 acgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||||||||||| | |||||||||||||||||| |||||    
T  2851000 acgacacggatactgacacgtc-acaccgctaataatttgataaaat 2851045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 3490460 - 3490426
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||||||| ||||||||||||||||||    
T  3490460 actgacacgccgacactgctaataatttgagaaaa 3490426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 5944254 - 5944304
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||| || |||||||||||| ||| ||||||||||||| ||||    
T  5944254 cggacacgacacagacactgacacgccgccacagctaataatttgaaaaaa 5944304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 7918303 - 7918245
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| ||||||||||||| || | |||||||| |||| | |||||||||||||||||||    
T  7918303 ggacaccggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatc 7918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 10475045 - 10475011
Alignment:
Q  177 tgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||||||||| |||||||||||    
T  10475045 tgacacgccgacaccgctaataacttgagaaaatc 10475011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 13011310 - 13011252
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||| ||| |||||||||| | ||||||| |||||||| ||||||||||||| ||||    
T  13011310 acggacaccgaacacgacacgaacactgacatgccgacacagctaataatttgaaaaaa 13011252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 18556535 - 18556497
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttga 18556497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 38078771 - 38078695
Alignment:
Q  136 ctatgaagcacgaatacggactccggacac--gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| |||||||| | ||||||  |||||| | ||||||||| |||||| ||||||||||||| ||||||    
T  38078771 ctatgaagcacggatacggacac-ggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatc 38078695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 40285724 - 40285686
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatcgc 213  Q
    |||||||| || |||||||||||||||||||||||||||    
T  40285724 actgacacaccaacaccgctaataatttgagaaaatcgc 40285686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 14359607 - 14359562
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||||| || || ||||||||||||| |||||||||||||    
T  14359607 cggacacgacacagacacggacacgccgacacagctaataatttga 14359562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 21530681 - 21530714
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| ||||||||||||||||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatc 21530714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 25361881 - 25361960
Alignment:
Q  181 acgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||||||| || |||||||||||||||| | ||| |||| | ||||  |||||||| |||| ||||||||||||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcac-ataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggaca 25361960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 5898352 - 5898300
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||| || ||||| |||||||||||||||||||| ||| ||||||    
T  5898352 cggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatc 5898300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 6612258 - 6612206
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||||||| | ||||||||||| || | ||||||||||| |||||    
T  6612258 ccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaat 6612206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 9828036 - 9828118
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataa--ttatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    |||||||||||||| |||||||||||| |||||| | ||| |||| | |||  |||||||||||||| ||||| ||||| ||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcac-ataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagaca 9828118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 16297369 - 16297317
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| ||||||||||||||| |||||| || |||||| ||| ||||||    
T  16297369 cggacacgatacggatactgacacgtcgacacagcaaataatatgaaaaaatc 16297317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 23636132 - 23636084
Alignment:
Q  162 acacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| | ||||||||||| ||||| || |||||||||||||    
T  23636132 acacgacacggacattgacacgccgaaaccgccaaaaatttgagaaaat 23636084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 25452215 - 25452152
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 242  Q
    |||| ||| |||| |||||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  25452215 gacatgccaacactgctaataatttgagaaaatctc-ataattcagtgtaattatgtgtcggtgt 25452152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 8383207 - 8383282
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| |||||| | |||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  8383207 ctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatc 8383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 5441128 - 5441029
Alignment:
Q  149 atacggac-tccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgt 247  Q
    |||||||| |||||||||||||| || |||||||||||| ||||||||| |||||||||||||| | ||| |||| |  |||||||||||||||| ||||    
T  5441128 atacggacatccggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcac-ataattcaatggaattatgtgtcggtgttgtgt 5441030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 24205135 - 24205076
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  24205135 acggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaat 24205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 8842280 - 8842346
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataattt 202  Q
    |||||||||||| |||||||| ||||| |||||||||| | ||||| ||||||||||||||||||||    
T  8842280 ctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattt 8842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 8039908 - 8039818
Alignment:
Q  172 gatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggacatg 261  Q
    |||| ||||||||| ||||||||||||||||||||||||   |||| |||| | ||||  ||||||||||||| ||||||||||||||||||    
T  8039908 gatattgacacgccaacaccgctaataatttgagaaaat-tatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 28917966 - 28918026
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| |||||||||||||||  ||||||||||||| ||||||    
T  28917966 acggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatc 28918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 4991061 - 4991002
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| ||| |||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  4991061 acggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaat 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 10335386 - 10335327
Alignment:
Q  145 acgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||  ||||||||||||    
T  10335386 acgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 25064859 - 25064981
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 235  Q
    ||||||| ||||  ||| ||| ||||||||||||| || | ||||||||||||||||||||| |||||| |||||| | ||| || | | ||||||||||    
T  25064859 ctatgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcac-ataatttagtgtaattatgtg 25064957  T
Q  236 tcggtgtggtgtcggtgtcggaca 259  Q
    | ||| | |||| |||||||||||    
T  25064958 ttggtatcgtgttggtgtcggaca 25064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 55401025 - 55401100
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||  |||||||| ||||| |||||||||| ||||| ||||||||||  |||||||||||| ||||||    
T  55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatc 55401100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 8587129 - 8587055
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||  |||||||| ||||||| |||||||| ||||||||||||||||  ||| |||||||| ||||||    
T  8587129 tatgaagcacagatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatc 8587055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 9800014 - 9800064
Alignment:
Q  160 ggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaat 9800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 32429488 - 32429414
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||||||| |||||||| ||||| | | |||||| |||||| |||||||||||| ||||||||    
T  32429488 tatgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatc 32429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 2620139 - 2620087
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||| |||| ||||||||||||||||| ||||| |||||||||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatc 2620087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 5407324 - 5407261
Alignment:
Q  168 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 232  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| | ||| |||||| |||||||    
T  5407324 cacggataccgacacgccgacaccgctaaaaatttgagaaaatcac-ataattcattgtaattat 5407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 15796388 - 15796328
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| | |||||||||||||| | ||||||||||| ||||||    
T  15796388 acggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 26492291 - 26492239
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||| ||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatc 26492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 12674585 - 12674535
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| | |||||| ||||||| ||||||||||||||||||||    
T  12674585 gacacgacacggacattgacacaccgacactgctaataatttgagaaaatc 12674535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 14223962 - 14223889
Alignment:
Q  135 actatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    ||||||||||||||| || ||| | ||||||||||| || || ||||||||||||| | ||||||||||||||||    
T  14223962 actatgaagcacgaacacagacac-ggacacgacacagacaccgacacgccgacacagataataatttgagaaaa 14223889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 14829657 - 14829763
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcgg 250  Q
    |||| ||||||| ||||| || |||||||||||||||| ||||||||||||| |||||| | ||| |||||  |||||  | |||||||||| |||||||    
T  14829657 ggacaccggacatgacacagacactgacacgccgacacagctaataatttga-aaaatcac-ataattcatggtaattacaagtgtcggtgtcgtgtcgg 14829754  T
Q  251 tgtcggaca 259  Q
    ||| |||||    
T  14829755 tgttggaca 14829763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 21720744 - 21720785
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaa 207  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  21720744 gacacggacactgacacgccgacaccgataataatttgagaa 21720785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 3164119 - 3164059
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| | || |||| |||||| ||||||||||||| ||||||    
T  3164119 acggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatc 3164059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 14618732 - 14618804
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||  ||||||| || ||||||||||||  ||||| |||| |||||| |||||||||| ||||||    
T  14618732 tatgaagcacgggtacggacaccagacacgacacgggcactgagacgctgacacccctaataatttaagaaaa 14618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 26508083 - 26508135
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| || ||||||||||||| ||||| ||||||||||||| ||||||    
T  26508083 cggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatc 26508135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 3865635 - 3865592
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||    
T  3865635 gacacggacactgacacgccgacacagctaataatttgaaaaaa 3865592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 14840376 - 14840325
Alignment:
Q  160 ggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||| |||||||| |||||  ||||||||| ||||||||    
T  14840376 ggacacgacacggataccgacacgccaacaccattaataatttcagaaaatc 14840325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatagtt 293  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatagtt 293  Q
    |||||||||||||||||||||||||||||||    
T  5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 7171474 - 7171520
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||||||||||||||||| |||||||| |||  ||||||||    
T  7171474 ccggacacgacacggatactgacatgccgacacagcttgtaatttga 7171520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 10318113 - 10318075
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  10318113 gacacggacactgacacgccgacacagctaataatttga 10318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 11610496 - 11610546
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||| |||| |||||||||||||| |||||||||||||||| | ||||||    
T  11610496 gacacaacacagatactgacacgccaacaccgctaataatttaaaaaaatc 11610546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 11658788 - 11658842
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgc 213  Q
    |||||||||||| || |||||||| || ||| || ||||||||||||||||||||    
T  11658788 cggacacgacacagacactgacacaccaacatcgttaataatttgagaaaatcgc 11658842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatagtt 293  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 34307867 - 34307794
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 232  Q
    ||||||| ||||| || ||  |||||| |||||||||||||||||||||||||| | |||||||| | |||||||    
T  34307867 ccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcac-atatttcagtgtaattat 34307794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 6525759 - 6525714
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| | ||||||| | |||||||||||||||||||||||||||    
T  6525759 gacacgtacactgacatgtcgacaccgctaataatttgagaaaatc 6525714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 12703989 - 12704030
Alignment:
Q  168 cacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  12703989 cacggatatggacacgccgacaccactaataatttgagaaaa 12704030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 14747510 - 14747584
Alignment:
Q  135 actatgaagcacgaatacggactccggacac--gacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    ||||||||||||| ||||||| | |||||||  |||||| | |||||||||||||||| ||||||||||||| ||||    
T  14747510 actatgaagcacggatacgga-tacggacaccggacacg-acactgacacgccgacacagctaataatttgaaaaaa 14747584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 25093474 - 25093527
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| || ||| |||||||||||| | |||| |||||||||||||    
T  25093474 ccggacacgacactgacactaacacgccgacactgttaatgatttgagaaaatc 25093527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 25652115 - 25652066
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||| ||| ||||||| |||| | |||||||||||||||||    
T  25652115 gacacgacacggacactaacacgccaacacggataataatttgagaaaat 25652066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 37077338 - 37077379
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaa 207  Q
    |||||||| | |||||||||||||||| ||||||||||||||    
T  37077338 gacacggacagtgacacgccgacaccgataataatttgagaa 37077379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 41961744 - 41961691
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||| ||||||||||||| || |||||||||||| |||  ||||||||||||    
T  41961744 acggacaccggacacgacacagacactgacacgccgtcacaactaataatttga 41961691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 3631644 - 3631708
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatt 201  Q
    ||||||||||| |||||| | || ||||||||||||| | | ||||||||||||| || ||||||    
T  3631644 tatgaagcacggatacggtcacctgacacgacacggacaataacacgccgacaccacttataatt 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 4987361 - 4987325
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  4987361 actgacacgccgacacagctaataatttgaaaaaatc 4987325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 14979154 - 14979206
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| ||| | || ||||||||||| ||||||||||||| ||||||    
T  14979154 cggacacgacaaggacaatggcacgccgacacagctaataatttgaaaaaatc 14979206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 21479107 - 21479143
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  21479107 actgacacgccgacacagctaataatttgaaaaaatc 21479143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 25074781 - 25074813
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||||| |||||||||||||||||    
T  25074781 gacacgccgacaccgataataatttgagaaaat 25074813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 26290360 - 26290396
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||||  ||||||||||||||||||    
T  26290360 actgacacgccgacaccattaataatttgagaaaatc 26290396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 27505334 - 27505370
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  27505334 ggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 32804622 - 32804574
Alignment:
Q  163 cacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||  | ||||| |||||||||| ||||||||||||||||||    
T  32804622 cacgacacgggcattgacatgccgacaccgttaataatttgagaaaatc 32804574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 40052321 - 40052357
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  40052321 actgacacgccgacacagctaataatttgaaaaaatc 40052357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 291
Target Start/End: Original strand, 21002 - 21149
Alignment:
Q  145 acgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 242  Q
    ||||| |||||| || ||||||||||||| ||||||| || ||||| | |||||||||||||||||| | |||  ||  ||||||  ||||||||||| |    
T  21002 acgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcac-ataagtcggtataattatatgtgtcggtat 21100  T
Q  243 ggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
     ||||||||||| |||| | ||||| |||| ||| ||||||||||||||    
T  21101 cgtgtcggtgtcagacacgcctaatccgagaagtatccgtgcttcatag 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 21217 - 21278
Alignment:
Q  230 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
T  21217 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 21346 - 21407
Alignment:
Q  230 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
T  21346 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 8763 - 8823
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  8763 acggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 225362 - 225303
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  225362 acggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaat 225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 259
Target Start/End: Original strand, 241559 - 241668
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 248  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||||  |||||| | ||| || | | |||||||  |||||||||| ||||     
T  241559 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcac-ataatttagtgtaattatgagtgtcggtgtcgtgtt 241657  T
Q  249 ggtgtcggaca 259  Q
    |||||||||||    
T  241658 ggtgtcggaca 241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 178925 - 178853
Alignment:
Q  139 tgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||  ||| |||||||||||||||| ||||||||||||||||  |||||||||||| ||||||    
T  178925 tgaagcacggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 178853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 192333 - 192284
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  192333 gacacgatacggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 23293080 - 23293020
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| | |||||||||||||| ||||||||||||| ||||||    
T  23293080 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatc 23293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 847918 - 847975
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||| ||||||||||||| || |||||||||||||  |||||||||||||||||||||    
T  847918 ggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 36635296 - 36635349
Alignment:
Q  158 ccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||    
T  36635296 ccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatc 36635349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 24343472 - 24343531
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| ||||||||||||||||  | ||||||||||||| | |||||||||||||||||    
T  24343472 acggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaat 24343531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 30982967 - 30982863
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 250  Q
    |||| ||||| |||||||||| || ||||||||   ||||||||| ||||||||||||| | |||||||| | |||||||  |||||||||| |||||||    
T  30982967 ggacaccggatacgacacggacacagacacgcc---accgctaatgatttgagaaaatcac-atatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T
Q  251 tgtcggaca 259  Q
    |||| ||||    
T  30982871 tgtcagaca 30982863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 35723455 - 35723420
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723455 actgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 7670625 - 7670709
Alignment:
Q  130 catatactatgaagcacgaatacggactccggacacgacacggatactgaca---cgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||||||||| |||  ||||||||||| |||| |||||||   ||||||||  ||||||| ||||||||||||    
T  7670625 catatagtatgaagcacgaatatggataccggacacgacgcggaaactgacacgtcgccgacattgctaatagtttgagaaaatc 7670709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 17345485 - 17345451
Alignment:
Q  175 actgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||||||||||||||||||||||||||||    
T  17345485 actgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 20521933 - 20521883
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||| ||||||    
T  20521933 gacacgacacggacactgacacgccgataccgataataatttgataaaatc 20521883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 20633450 - 20633508
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||| || ||||||| ||||| ||||||||| |||||||||||||||||||| ||||    
T  20633450 acggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa 20633508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 7012041 - 7012090
Alignment:
Q  161 gacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||| |||||||| || ||||||||||||||| |||||||||||||||||    
T  7012041 gacaggacacggacaccgacacgccgacaccgataataatttgagaaaat 7012090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 28084475 - 28084544
Alignment:
Q  140 gaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||  |||||||| ||||||||||||| ||  ||||||||||||||| ||||| ||||||| ||||    
T  28084475 gaagcacagatacggacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaa 28084544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 5775469 - 5775392
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacgga---tactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| |||| | ||||||||||||||   |||||||||  |||||||  ||||||||||||||||||    
T  5775469 ctatgaagcacgaatatggacacaggacacgacacggacactactgacac-acgacaccattaataatttgagaaaatc 5775392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 28720827 - 28720894
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttga 204  Q
    |||||||||||| |||| ||| | |||||||||||| | ||||||| |||||||| |||||||||||||    
T  28720827 ctatgaagcacgtatacagacac-ggacacgacacgaacactgacatgccgacacagctaataatttga 28720894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 291
Target Start/End: Original strand, 30298926 - 30299048
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggc 263  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtc 30299020  T
Q  264 taattcgaggagtgtccgtgcttcatag 291  Q
    |||| |||||||||||||||||||||||    
T  30299021 taatccgaggagtgtccgtgcttcatag 30299048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 291
Target Start/End: Original strand, 30327794 - 30327916
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggc 263  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtc 30327888  T
Q  264 taattcgaggagtgtccgtgcttcatag 291  Q
    |||| |||||||||||||||||||||||    
T  30327889 taatccgaggagtgtccgtgcttcatag 30327916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 12628693 - 12628619
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| ||||||| | |||||| ||||| || ||||||| |||||||| | ||||||||||| ||||||    
T  12628693 ctatgaagcacggatacgga-tacggacatgacactgacactgacatgccgacacagttaataatttgaaaaaatc 12628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 21945468 - 21945527
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| ||||||| ||||| || ||||||| |||||||| ||||||||||||| |||||    
T  21945468 acggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaat 21945527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 5414264 - 5414206
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||| |||||||||||||||| || ||||||||||||| ||||||  ||| ||||||||    
T  5414264 ggacaccggacacgacacggacacggacacgccgacacagctaatttttttagaaaatc 5414206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 16184799 - 16184842
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  16184799 gacacggacactgacacgccgac--cgctaataatttgagaaaatc 16184842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 40613441 - 40613475
Alignment:
Q  177 tgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||||||||| ||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatc 40613475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 49430998 - 49431048
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||||||||| |||| | |||||||||||||| ||||||||||||| ||||    
T  49430998 cggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaa 49431048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 13783261 - 13783302
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaa 207  Q
    |||||||| |||||||| |||||||||||||| |||||||||    
T  13783261 gacacggacactgacacaccgacaccgctaattatttgagaa 13783302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 30522994 - 30522949
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||| ||||  ||||||||||| |||||||||||||    
T  30522994 gacacggatactgatacgctcacaccgctaattatttgagaaaatc 30522949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 1747205 - 1747237
Alignment:
Q  179 acacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||||||||| |||||||||||    
T  1747205 acacgccgacaccgctaataaattgagaaaatc 1747237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 2234230 - 2234305
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 242  Q
    ||||| ||||||||||||| | ||||| | |||||||||||||||| | ||| |||| | |||||||||||| ||||    
T  2234230 gacacagatactgacacgctgtcaccgttgataatttgagaaaatcac-ataattcaatgtaattatgtgtcagtgt 2234305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 3947877 - 3947798
Alignment:
Q  133 atactatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgc 213  Q
    |||||||||||| |  |||||||| | |||||| |||| || || |||| |||||||| ||||||||||||| ||||||||    
T  3947877 atactatgaagctcagatacggacac-ggacaccacacagacacggacatgccgacacagctaataatttgaaaaaatcgc 3947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 18844467 - 18844423
Alignment:
Q  247 tcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||    
T  18844467 tcggtgtcggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 28470448 - 28470484
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 31603101 - 31603045
Alignment:
Q  153 ggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaa 209  Q
    |||| ||| |||||||||| ||||||||||||  ||||| |||||||||||| ||||    
T  31603101 ggacaccgaacacgacacgaatactgacacgctcacaccactaataatttgaaaaaa 31603045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 35158079 - 35158027
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttg 203  Q
    |||||| |||||||| ||||||| |||||||||||||| |  |||||||||||    
T  35158079 acggacaccggacacaacacggacactgacacgccgacgcaactaataatttg 35158027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 53135 - 53256
Alignment:
Q  137 tatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gt 234  Q
    |||| |||||| | ||| || ||||||||||||||    |||||||||||| ||||| ||||||||||||||||| | ||| |||| | |||||||  ||    
T  53135 tatgtagcacggacacgaacaccggacacgacacg----ctgacacgccgataccgccaataatttgagaaaatcac-ataattcagtgtaattataagt 53229  T
Q  235 gtcggtgtggtgtcggtgtcggacatg 261  Q
    |||||||  ||||||||||||||||||    
T  53230 gtcggtgccgtgtcggtgtcggacatg 53256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 92790 - 92831
Alignment:
Q  169 acggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaat 92831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 17979 - 17903
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcg 212  Q
    |||||||||||| |||||||| | |||||||| ||  | ||  ||||||| ||||||||||||||||||||||||||    
T  17979 ctatgaagcacggatacggacactggacacgatacaaacaccaacacgcctacaccgctaataatttgagaaaatcg 17903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 3281 - 3340
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaat 210  Q
    |||||| |||||||||||||||||||||||||| |||||  ||||| ||||| |||||||    
T  3281 acggacaccggacacgacacggatactgacacgtcgacaatgctaacaattttagaaaat 3340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 51791 - 51836
Alignment:
Q  166 gacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatc 51836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 556 - 496
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||| ||||| |||||| ||||| |||||||||| ||||||||||||| ||||||    
T  556 acggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatc 496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 8631 - 8729
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 248  Q
    |||||| |||||||||||| ||| ||||||||| ||||||  ||||||||||  ||||||| | ||| |||| |||||||||  |||||||||| |||||    
T  8631 acggacaccggacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcac-atagttcagtataattataagtgtcggtgtcgtgtc 8729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 46655 - 46707
Alignment:
Q  159 cggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| | |||||||||||||| | ||||||||||| ||||||    
T  46655 cggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 46707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 46731 - 46778
Alignment:
Q  245 tgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 293  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||||||    
T  46731 tgtcggtgtcg-acacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 23371 - 23433
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataa 199  Q
    |||||||||||| |||||||| | ||||||||||| || |||||||||||||||| | ||||||    
T  23371 ctatgaagcacggatacggacac-ggacacgacacagacactgacacgccgacacagataataa 23433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 90793 - 90868
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||| ||||||||  | ||||||||||| || |||||||| || |||||  ||||||||||||||||||    
T  90793 ctatgatgcacaaatacggatactggacacgacacagacactgacacaccaacaccattaataatttgagaaaatc 90868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 135421 - 135346
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||||||| | |||||||| ||| | ||||||| || ||  |||| ||||||| ||||||||||||||||||||    
T  135421 ctatgaagcatggatacggacaccgaatacgacacagacaccaacacaccgacactgctaataatttgagaaaatc 135346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 1636 - 1669
Alignment:
Q  178 gacacgccgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| ||||||||||||||||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatc 1669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 291
Target Start/End: Complemental strand, 8592 - 8564
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||||||||||||||||    
T  8592 ctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 9863 - 9923
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||| ||| || ||||||||||||| ||||||  ||| ||||||||    
T  9863 acggacaccggacacgacatggacaccgacacgccgacacagctaatttttttagaaaatc 9923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 28843 - 28913
Alignment:
Q  179 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 248  Q
    |||||||||||||| ||||||||| |||||||||| ||| |||| | ||||  ||||||||||||| |||||    
T  28843 acacgccgacaccgttaataatttaagaaaatcgc-ataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 130447 - 130507
Alignment:
Q  151 acggactccggacacgacacggatactgacacgccgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||| | ||||| |||||||| | ||||| ||||| ||||||    
T  130447 acggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatc 130507  T

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