View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12986_low_3 (Length: 222)

Name: NF12986_low_3
Description: NF12986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12986_low_3
NF12986_low_3
[»] chr8 (69 HSPs)
chr8 (75-213)||(39723965-39724105)
chr8 (78-213)||(13026635-13026772)
chr8 (75-213)||(22851387-22851527)
chr8 (78-213)||(9823278-9823415)
chr8 (75-213)||(9822745-9822885)
chr8 (75-193)||(13027219-13027338)
chr8 (75-213)||(3307335-3307475)
chr8 (91-213)||(39723415-39723539)
chr8 (78-213)||(13937307-13937443)
chr8 (78-210)||(13936723-13936853)
chr8 (78-213)||(6092777-6092911)
chr8 (81-213)||(15042148-15042281)
chr8 (76-183)||(41662350-41662459)
chr8 (76-183)||(43245869-43245978)
chr8 (78-183)||(24473716-24473822)
chr8 (78-183)||(37396708-37396814)
chr8 (68-183)||(34498503-34498620)
chr8 (80-160)||(15442765-15442845)
chr8 (76-132)||(16929242-16929298)
chr8 (76-140)||(37752082-37752146)
chr8 (147-213)||(22851903-22851970)
chr8 (69-156)||(37397121-37397208)
chr8 (78-183)||(6199044-6199150)
chr8 (78-160)||(15155883-15155965)
chr8 (80-168)||(765736-765825)
chr8 (76-183)||(15156132-15156241)
chr8 (75-132)||(37752416-37752473)
chr8 (72-183)||(9623496-9623608)
chr8 (76-160)||(34498120-34498204)
chr8 (78-168)||(12281124-12281215)
chr8 (70-132)||(16928933-16928996)
chr8 (78-156)||(41662521-41662599)
chr8 (78-132)||(43246176-43246230)
chr8 (75-132)||(12281426-12281483)
chr8 (75-156)||(24473340-24473421)
chr8 (66-130)||(43162222-43162285)
chr8 (76-131)||(3463946-3464001)
chr8 (69-183)||(6198649-6198764)
chr8 (78-183)||(17431287-17431393)
chr8 (78-156)||(20861614-20861692)
chr8 (75-132)||(34313762-34313817)
chr8 (81-154)||(15444625-15444698)
chr8 (75-140)||(23123335-23123400)
chr8 (75-134)||(25438789-25438848)
chr8 (81-156)||(25439102-25439176)
chr8 (81-183)||(33727053-33727156)
chr8 (80-132)||(74688-74739)
chr8 (85-128)||(7127660-7127702)
chr8 (75-154)||(16169171-16169249)
chr8 (78-132)||(18020088-18020140)
chr8 (79-130)||(22851958-22852009)
chr8 (78-132)||(41662107-41662161)
chr8 (97-131)||(43598756-43598790)
chr8 (100-183)||(74932-75016)
chr8 (81-130)||(22786843-22786892)
chr8 (80-132)||(23123517-23123567)
chr8 (83-177)||(7127779-7127877)
chr8 (83-132)||(9465700-9465750)
chr8 (98-132)||(9465874-9465908)
chr8 (83-132)||(18019915-18019965)
chr8 (82-132)||(43162539-43162588)
chr8 (81-141)||(7127913-7127973)
chr8 (100-129)||(11007584-11007613)
chr8 (83-131)||(15156062-15156111)
chr8 (78-118)||(767720-767759)
chr8 (78-134)||(2856526-2856582)
chr8 (97-133)||(3463659-3463695)
chr8 (92-140)||(9930831-9930879)
chr8 (83-130)||(37752242-37752290)
[»] chr7 (67 HSPs)
chr7 (75-213)||(44599486-44599626)
chr7 (78-213)||(13863313-13863450)
chr7 (78-213)||(13863875-13864010)
chr7 (78-193)||(44600073-44600189)
chr7 (78-213)||(8643684-8643820)
chr7 (78-213)||(46816229-46816365)
chr7 (75-183)||(37888830-37888939)
chr7 (78-183)||(10533034-10533140)
chr7 (77-156)||(9035269-9035348)
chr7 (78-183)||(20419272-20419378)
chr7 (78-183)||(22740156-22740262)
chr7 (78-156)||(37889235-37889313)
chr7 (78-156)||(37972372-37972450)
chr7 (76-183)||(3687604-3687712)
chr7 (78-168)||(9412288-9412379)
chr7 (81-183)||(18863970-18864073)
chr7 (81-156)||(20418891-20418966)
chr7 (18-77)||(27225943-27226002)
chr7 (78-183)||(3205041-3205147)
chr7 (78-183)||(17156967-17157073)
chr7 (78-183)||(29292922-29293028)
chr7 (78-156)||(37971960-37972038)
chr7 (75-132)||(13772901-13772958)
chr7 (67-168)||(23686410-23686510)
chr7 (75-183)||(29293294-29293403)
chr7 (76-156)||(13741555-13741635)
chr7 (78-183)||(9034867-9034974)
chr7 (78-156)||(13744209-13744286)
chr7 (78-139)||(13772641-13772702)
chr7 (77-154)||(48359319-48359395)
chr7 (75-130)||(18925059-18925114)
chr7 (81-156)||(22740567-22740641)
chr7 (75-132)||(3687350-3687408)
chr7 (77-141)||(5349724-5349785)
chr7 (79-129)||(5735253-5735303)
chr7 (78-132)||(9412023-9412077)
chr7 (78-183)||(18864350-18864455)
chr7 (19-77)||(27233947-27234005)
chr7 (78-156)||(42418591-42418669)
chr7 (76-156)||(3204667-3204745)
chr7 (78-126)||(23686723-23686771)
chr7 (75-131)||(35079957-35080012)
chr7 (76-183)||(36527746-36527854)
chr7 (81-183)||(42418976-42419079)
chr7 (79-160)||(8953864-8953941)
chr7 (75-183)||(29291990-29292098)
chr7 (76-131)||(38191566-38191621)
chr7 (78-183)||(38826861-38826967)
chr7 (112-213)||(46815202-46815304)
chr7 (78-131)||(6908213-6908265)
chr7 (81-160)||(15567246-15567322)
chr7 (79-139)||(18925315-18925373)
chr7 (78-139)||(33628653-33628714)
chr7 (75-126)||(27096044-27096094)
chr7 (75-126)||(27182209-27182259)
chr7 (81-131)||(6908485-6908534)
chr7 (82-183)||(48359606-48359707)
chr7 (75-132)||(29291803-29291860)
chr7 (75-132)||(34235978-34236035)
chr7 (101-140)||(35080215-35080254)
chr7 (81-126)||(5735553-5735598)
chr7 (83-131)||(6908391-6908440)
chr7 (81-146)||(36527387-36527451)
chr7 (79-132)||(39983700-39983753)
chr7 (78-134)||(16198975-16199031)
chr7 (78-134)||(30857902-30857958)
chr7 (80-128)||(33628397-33628444)
[»] chr6 (38 HSPs)
chr6 (78-213)||(33829553-33829690)
chr6 (75-193)||(33828987-33829106)
chr6 (78-183)||(3403936-3404043)
chr6 (75-139)||(3403714-3403778)
chr6 (77-183)||(10087806-10087913)
chr6 (77-183)||(33974247-33974354)
chr6 (67-132)||(11656782-11656847)
chr6 (78-168)||(21031979-21032069)
chr6 (78-183)||(7654496-7654602)
chr6 (78-132)||(10039676-10039729)
chr6 (78-132)||(18241854-18241908)
chr6 (75-183)||(18242103-18242213)
chr6 (67-128)||(30388051-30388111)
chr6 (81-183)||(30388311-30388413)
chr6 (75-156)||(32733972-32734053)
chr6 (78-127)||(21032285-21032334)
chr6 (81-132)||(3825530-3825580)
chr6 (81-140)||(31598720-31598778)
chr6 (78-132)||(13579651-13579704)
chr6 (75-156)||(22684334-22684414)
chr6 (75-156)||(22754654-22754734)
chr6 (78-154)||(29074350-29074425)
chr6 (78-154)||(29079114-29079189)
chr6 (78-154)||(29106923-29106998)
chr6 (83-132)||(2762611-2762661)
chr6 (83-132)||(10039843-10039893)
chr6 (78-132)||(33655115-33655168)
chr6 (83-128)||(12714436-12714481)
chr6 (79-156)||(22755065-22755142)
chr6 (78-131)||(31598274-31598326)
chr6 (76-132)||(33971992-33972047)
chr6 (78-156)||(2354786-2354864)
chr6 (83-132)||(11656608-11656658)
chr6 (75-183)||(2354406-2354514)
chr6 (105-168)||(2762510-2762574)
chr6 (83-130)||(3403867-3403915)
chr6 (99-131)||(11656535-11656567)
chr6 (83-130)||(30388242-30388290)
[»] chr2 (69 HSPs)
chr2 (75-213)||(26842155-26842295)
chr2 (78-213)||(2639399-2639536)
chr2 (81-213)||(7591204-7591337)
chr2 (78-213)||(26841587-26841724)
chr2 (79-193)||(18296077-18296192)
chr2 (78-213)||(2638820-2638958)
chr2 (75-213)||(7591767-7591907)
chr2 (78-168)||(24832331-24832422)
chr2 (75-167)||(11883890-11883983)
chr2 (78-175)||(37720204-37720301)
chr2 (81-183)||(8851151-8851254)
chr2 (78-183)||(30190923-30191030)
chr2 (78-140)||(18296685-18296747)
chr2 (74-183)||(26692768-26692878)
chr2 (75-183)||(7664621-7664730)
chr2 (75-132)||(26737781-26737838)
chr2 (81-183)||(40469676-40469780)
chr2 (78-168)||(11883623-11883714)
chr2 (78-183)||(7664248-7664354)
chr2 (78-156)||(8851558-8851636)
chr2 (77-213)||(38490758-38490895)
chr2 (78-156)||(41790888-41790966)
chr2 (75-156)||(17850975-17851055)
chr2 (75-160)||(30191197-30191282)
chr2 (147-213)||(18296639-18296707)
chr2 (77-156)||(16910826-16910905)
chr2 (78-168)||(20347427-20347518)
chr2 (79-183)||(16911217-16911321)
chr2 (75-160)||(40469424-40469509)
chr2 (78-184)||(5378661-5378768)
chr2 (78-184)||(5379906-5380013)
chr2 (78-183)||(6171404-6171510)
chr2 (78-153)||(7979982-7980056)
chr2 (76-130)||(6171154-6171207)
chr2 (85-155)||(6324924-6324994)
chr2 (80-180)||(6325298-6325399)
chr2 (79-156)||(18750102-18750178)
chr2 (81-183)||(32673090-32673193)
chr2 (74-183)||(19141797-19141905)
chr2 (81-156)||(26692399-26692474)
chr2 (78-132)||(26737482-26737534)
chr2 (106-183)||(17851350-17851428)
chr2 (78-132)||(20347163-20347217)
chr2 (76-130)||(40221311-40221364)
chr2 (75-160)||(32672839-32672924)
chr2 (78-130)||(6495723-6495775)
chr2 (112-156)||(7979599-7979643)
chr2 (80-132)||(18055050-18055100)
chr2 (81-156)||(5793450-5793525)
chr2 (81-132)||(15920781-15920832)
chr2 (66-132)||(17345721-17345785)
chr2 (81-156)||(41790494-41790568)
chr2 (78-125)||(43495309-43495356)
chr2 (80-150)||(19141446-19141515)
chr2 (75-168)||(43495569-43495661)
chr2 (83-131)||(26737657-26737706)
chr2 (79-131)||(6495468-6495519)
chr2 (78-130)||(17346037-17346088)
chr2 (75-139)||(18055309-18055373)
chr2 (83-130)||(40469607-40469655)
chr2 (83-175)||(40221443-40221538)
chr2 (80-168)||(15321394-15321481)
chr2 (81-131)||(15321515-15321565)
chr2 (83-131)||(20347341-20347390)
chr2 (83-131)||(30191051-30191100)
chr2 (83-131)||(32673020-32673069)
chr2 (83-130)||(11883751-11883799)
chr2 (78-130)||(29230282-29230334)
chr2 (81-132)||(43495484-43495535)
[»] chr4 (77 HSPs)
chr4 (76-213)||(50679341-50679480)
chr4 (75-213)||(36096392-36096532)
chr4 (78-213)||(36095817-36095953)
chr4 (78-213)||(43051169-43051306)
chr4 (78-193)||(50678779-50678895)
chr4 (81-213)||(43050610-43050744)
chr4 (78-213)||(45830115-45830250)
chr4 (78-213)||(56505693-56505830)
chr4 (81-213)||(47219122-47219252)
chr4 (78-213)||(56506491-56506628)
chr4 (75-213)||(32703568-32703707)
chr4 (78-213)||(45828994-45829130)
chr4 (76-183)||(16555764-16555873)
chr4 (76-183)||(4239314-4239422)
chr4 (78-213)||(28196691-28196827)
chr4 (78-183)||(28196346-28196452)
chr4 (79-213)||(11529169-11529305)
chr4 (79-182)||(25161879-25161983)
chr4 (69-196)||(39744400-39744528)
chr4 (78-183)||(9380307-9380413)
chr4 (78-183)||(9380689-9380795)
chr4 (78-166)||(18077167-18077256)
chr4 (78-183)||(3930427-3930533)
chr4 (77-183)||(23540200-23540307)
chr4 (78-156)||(9023244-9023322)
chr4 (78-183)||(9023628-9023734)
chr4 (78-183)||(32703225-32703331)
chr4 (75-156)||(169415-169496)
chr4 (78-156)||(169013-169092)
chr4 (78-196)||(293152-293271)
chr4 (77-183)||(39086571-39086678)
chr4 (78-132)||(13198906-13198960)
chr4 (78-167)||(16555515-16555605)
chr4 (78-156)||(26207722-26207800)
chr4 (78-160)||(35393749-35393829)
chr4 (78-183)||(39744030-39744136)
chr4 (79-156)||(43292038-43292115)
chr4 (76-156)||(43292333-43292413)
chr4 (78-213)||(48405962-48406097)
chr4 (78-132)||(8182172-8182227)
chr4 (78-156)||(292782-292860)
chr4 (78-156)||(26207361-26207438)
chr4 (82-132)||(49178816-49178866)
chr4 (78-139)||(24775776-24775837)
chr4 (69-128)||(11241380-11241439)
chr4 (66-140)||(11241653-11241727)
chr4 (78-183)||(23539841-23539945)
chr4 (72-119)||(49178527-49178574)
chr4 (98-160)||(39415244-39415306)
chr4 (75-160)||(3930176-3930260)
chr4 (78-139)||(5205988-5206049)
chr4 (81-183)||(13198606-13198711)
chr4 (76-132)||(27304716-27304770)
chr4 (78-130)||(22681881-22681933)
chr4 (92-156)||(48406361-48406425)
chr4 (77-140)||(5206222-5206284)
chr4 (97-183)||(25162261-25162348)
chr4 (97-156)||(44468899-44468958)
chr4 (79-132)||(8181992-8182046)
chr4 (83-132)||(27304893-27304943)
chr4 (79-132)||(8488482-8488534)
chr4 (79-132)||(22681576-22681628)
chr4 (78-131)||(25225399-25225452)
chr4 (78-168)||(39415490-39415578)
chr4 (78-183)||(39912054-39912158)
chr4 (83-130)||(16555695-16555743)
chr4 (78-160)||(23432476-23432559)
chr4 (83-160)||(5206107-5206185)
chr4 (79-132)||(7603146-7603197)
chr4 (78-132)||(8488188-8488242)
chr4 (83-132)||(49178644-49178694)
chr4 (97-131)||(54509116-54509150)
chr4 (83-131)||(3930357-3930406)
chr4 (79-184)||(23433433-23433538)
chr4 (78-131)||(54508815-54508868)
chr4 (77-129)||(7603422-7603473)
chr4 (112-156)||(39912463-39912507)
[»] scaffold0328 (2 HSPs)
scaffold0328 (76-213)||(6150-6288)
scaffold0328 (78-213)||(6712-6849)
[»] chr5 (62 HSPs)
chr5 (76-213)||(18817528-18817667)
chr5 (78-213)||(18816952-18817089)
chr5 (78-213)||(11350808-11350944)
chr5 (81-213)||(11351346-11351478)
chr5 (76-183)||(18433013-18433122)
chr5 (69-183)||(12498558-12498673)
chr5 (78-183)||(26020450-26020557)
chr5 (78-183)||(12498876-12498982)
chr5 (78-156)||(26571140-26571218)
chr5 (79-183)||(22729388-22729492)
chr5 (75-156)||(37780718-37780799)
chr5 (76-183)||(3888237-3888345)
chr5 (81-156)||(21207229-21207304)
chr5 (78-183)||(25115757-25115864)
chr5 (78-183)||(25174849-25174956)
chr5 (78-160)||(25175123-25175205)
chr5 (81-155)||(31569910-31569983)
chr5 (63-183)||(34576853-34576972)
chr5 (78-183)||(42919305-42919410)
chr5 (77-183)||(19514524-19514632)
chr5 (81-175)||(2817152-2817247)
chr5 (76-183)||(22729006-22729112)
chr5 (73-183)||(26570724-26570835)
chr5 (78-132)||(18433316-18433370)
chr5 (78-183)||(19514911-19515017)
chr5 (78-140)||(22428934-22428995)
chr5 (78-140)||(22429188-22429249)
chr5 (78-132)||(25116061-25116115)
chr5 (78-156)||(37610202-37610279)
chr5 (78-156)||(37780320-37780397)
chr5 (78-183)||(43464140-43464245)
chr5 (75-156)||(37610594-37610674)
chr5 (81-183)||(3888610-3888713)
chr5 (77-140)||(34577156-34577218)
chr5 (81-156)||(43463759-43463833)
chr5 (78-128)||(16466746-16466796)
chr5 (78-183)||(34147458-34147564)
chr5 (79-156)||(25940990-25941067)
chr5 (81-140)||(9665560-9665617)
chr5 (75-131)||(23011076-23011131)
chr5 (75-124)||(12441320-12441367)
chr5 (78-156)||(25940521-25940599)
chr5 (78-132)||(41383167-41383220)
chr5 (75-156)||(2817551-2817631)
chr5 (81-154)||(10098919-10098991)
chr5 (75-131)||(9665828-9665882)
chr5 (76-156)||(10098517-10098597)
chr5 (112-183)||(34147173-34147245)
chr5 (78-157)||(5187805-5187884)
chr5 (81-156)||(11316950-11317025)
chr5 (78-140)||(5187551-5187613)
chr5 (84-130)||(16726084-16726130)
chr5 (78-132)||(33324838-33324892)
chr5 (81-131)||(41382896-41382945)
chr5 (81-131)||(9869563-9869611)
chr5 (81-131)||(23011383-23011432)
chr5 (83-131)||(25115885-25115934)
chr5 (83-131)||(25174977-25175026)
chr5 (75-156)||(30401879-30401960)
chr5 (81-129)||(34576991-34577040)
chr5 (83-130)||(18433143-18433191)
chr5 (112-156)||(41072190-41072234)
[»] chr1 (78 HSPs)
chr1 (75-213)||(6002234-6002374)
chr1 (78-193)||(49284409-49284525)
chr1 (80-213)||(6002810-6002946)
chr1 (101-213)||(49284972-49285086)
chr1 (78-183)||(39691948-39692054)
chr1 (75-183)||(9347123-9347232)
chr1 (75-183)||(27172113-27172221)
chr1 (75-183)||(48105064-48105173)
chr1 (75-140)||(48190768-48190833)
chr1 (78-183)||(47955306-47955413)
chr1 (78-156)||(32163019-32163097)
chr1 (78-183)||(44911025-44911131)
chr1 (75-183)||(13918443-13918552)
chr1 (75-183)||(26814691-26814800)
chr1 (78-183)||(27172490-27172595)
chr1 (76-156)||(6703870-6703950)
chr1 (76-156)||(50430057-50430137)
chr1 (80-183)||(50526420-50526524)
chr1 (81-183)||(46823846-46823949)
chr1 (81-183)||(48104681-48104784)
chr1 (78-140)||(8108985-8109047)
chr1 (78-183)||(20480168-20480273)
chr1 (71-153)||(20480591-20480672)
chr1 (78-183)||(26815067-26815173)
chr1 (78-183)||(28633720-28633826)
chr1 (75-183)||(17518551-17518658)
chr1 (78-139)||(48191348-48191409)
chr1 (75-183)||(50615569-50615677)
chr1 (75-183)||(50623397-50623505)
chr1 (81-183)||(22149649-22149750)
chr1 (72-183)||(49318114-49318225)
chr1 (81-183)||(28634105-28634208)
chr1 (78-160)||(31848166-31848246)
chr1 (78-183)||(999473-999578)
chr1 (78-183)||(6703460-6703566)
chr1 (78-183)||(9347499-9347604)
chr1 (78-132)||(13589659-13589712)
chr1 (78-160)||(47955580-47955662)
chr1 (75-156)||(21687022-21687103)
chr1 (78-154)||(4692411-4692487)
chr1 (81-156)||(42611188-42611263)
chr1 (77-183)||(49317751-49317857)
chr1 (75-156)||(20371328-20371409)
chr1 (78-156)||(46824254-46824332)
chr1 (78-156)||(50429656-50429734)
chr1 (79-156)||(13918843-13918920)
chr1 (76-156)||(42611590-42611670)
chr1 (147-213)||(48191302-48191369)
chr1 (81-156)||(999115-999189)
chr1 (81-132)||(8108724-8108775)
chr1 (78-184)||(19008697-19008804)
chr1 (78-183)||(33085671-33085775)
chr1 (78-160)||(17518303-17518384)
chr1 (78-132)||(41083211-41083264)
chr1 (81-184)||(31847898-31848002)
chr1 (78-154)||(21687445-21687520)
chr1 (77-183)||(41082908-41083015)
chr1 (147-213)||(48190811-48190879)
chr1 (77-128)||(1176716-1176766)
chr1 (81-132)||(1177018-1177069)
chr1 (78-156)||(20371040-20371116)
chr1 (81-156)||(44911413-44911488)
chr1 (75-154)||(49318421-49318499)
chr1 (78-132)||(22149403-22149455)
chr1 (75-156)||(47498298-47498377)
chr1 (65-154)||(50949148-50949237)
chr1 (79-130)||(46056904-46056953)
chr1 (81-132)||(1176839-1176890)
chr1 (105-160)||(24671283-24671338)
chr1 (81-130)||(22149580-22149630)
chr1 (78-132)||(48313792-48313846)
chr1 (82-156)||(50949541-50949615)
chr1 (83-131)||(17518481-17518530)
chr1 (78-131)||(39690794-39690847)
chr1 (83-131)||(47955434-47955483)
chr1 (78-127)||(50615240-50615289)
chr1 (78-127)||(50623068-50623117)
chr1 (79-135)||(47498492-47498547)
[»] chr3 (67 HSPs)
chr3 (81-213)||(1928351-1928484)
chr3 (76-183)||(8314011-8314119)
chr3 (78-183)||(48159897-48160003)
chr3 (78-179)||(47871073-47871175)
chr3 (75-183)||(20968967-20969076)
chr3 (75-183)||(27238848-27238957)
chr3 (75-183)||(42673244-42673352)
chr3 (75-156)||(48160309-48160390)
chr3 (98-205)||(10771523-10771629)
chr3 (77-183)||(47666283-47666390)
chr3 (78-183)||(40848521-40848626)
chr3 (78-140)||(45060863-45060925)
chr3 (78-183)||(53687888-53687994)
chr3 (72-153)||(3353122-3353202)
chr3 (75-132)||(10293909-10293966)
chr3 (79-183)||(22429159-22429264)
chr3 (77-196)||(42672977-42673096)
chr3 (77-160)||(21896483-21896565)
chr3 (78-160)||(18875163-18875245)
chr3 (78-160)||(20968718-20968800)
chr3 (78-183)||(27238465-27238571)
chr3 (78-156)||(40848937-40849015)
chr3 (75-156)||(10348775-10348856)
chr3 (75-156)||(24485436-24485516)
chr3 (73-154)||(36180968-36181049)
chr3 (75-183)||(53688251-53688359)
chr3 (77-183)||(10293607-10293715)
chr3 (77-140)||(17372297-17372360)
chr3 (81-139)||(14015957-14016014)
chr3 (78-156)||(26007182-26007259)
chr3 (75-140)||(1927769-1927834)
chr3 (82-131)||(4947263-4947312)
chr3 (78-131)||(18874882-18874935)
chr3 (75-156)||(53766160-53766241)
chr3 (147-213)||(1927812-1927878)
chr3 (85-156)||(3353527-3353597)
chr3 (75-134)||(3644781-3644840)
chr3 (77-140)||(9027025-9027087)
chr3 (81-183)||(26007567-26007670)
chr3 (77-160)||(42627519-42627600)
chr3 (75-213)||(28702275-28702410)
chr3 (77-126)||(45060595-45060644)
chr3 (112-156)||(22429572-22429616)
chr3 (112-156)||(42456171-42456215)
chr3 (72-119)||(13657735-13657782)
chr3 (106-153)||(24485049-24485096)
chr3 (78-183)||(36180556-36180660)
chr3 (75-154)||(44008379-44008457)
chr3 (79-132)||(17372594-17372645)
chr3 (78-131)||(1101182-1101235)
chr3 (78-160)||(47870823-47870902)
chr3 (78-131)||(53766580-53766633)
chr3 (79-155)||(10348480-10348556)
chr3 (81-132)||(13657621-13657673)
chr3 (83-130)||(18875017-18875065)
chr3 (76-132)||(23630035-23630091)
chr3 (80-131)||(1100917-1100968)
chr3 (83-129)||(9026860-9026907)
chr3 (78-129)||(17441066-17441117)
chr3 (78-140)||(21895657-21895720)
chr3 (78-131)||(8315083-8315135)
chr3 (83-131)||(20968897-20968946)
chr3 (78-127)||(42455790-42455839)
chr3 (60-108)||(51213289-51213338)
chr3 (81-132)||(3644720-3644772)
chr3 (97-125)||(26540876-26540904)
chr3 (78-154)||(47665911-47665987)
[»] scaffold0192 (2 HSPs)
scaffold0192 (78-183)||(25316-25423)
scaffold0192 (83-130)||(25247-25295)
[»] scaffold0001 (4 HSPs)
scaffold0001 (75-160)||(438927-439012)
scaffold0001 (78-168)||(183626-183716)
scaffold0001 (78-160)||(439173-439253)
scaffold0001 (81-131)||(183367-183416)
[»] scaffold0319 (3 HSPs)
scaffold0319 (77-183)||(6644-6751)
scaffold0319 (78-132)||(6394-6448)
scaffold0319 (83-130)||(6575-6623)
[»] scaffold0460 (2 HSPs)
scaffold0460 (78-183)||(330-436)
scaffold0460 (75-156)||(739-819)
[»] scaffold0110 (3 HSPs)
scaffold0110 (71-183)||(45754-45867)
scaffold0110 (65-160)||(45524-45618)
scaffold0110 (83-131)||(45684-45733)
[»] scaffold0802 (3 HSPs)
scaffold0802 (76-183)||(1367-1476)
scaffold0802 (76-160)||(1116-1200)
scaffold0802 (83-131)||(1297-1346)
[»] scaffold0017 (2 HSPs)
scaffold0017 (76-156)||(185250-185330)
scaffold0017 (79-183)||(184840-184945)
[»] scaffold0041 (2 HSPs)
scaffold0041 (78-183)||(38643-38749)
scaffold0041 (112-156)||(38285-38329)
[»] scaffold0029 (1 HSPs)
scaffold0029 (78-183)||(9905-10012)
[»] scaffold0176 (2 HSPs)
scaffold0176 (78-156)||(19621-19698)
scaffold0176 (78-144)||(20031-20097)
[»] scaffold0069 (2 HSPs)
scaffold0069 (75-156)||(50482-50563)
scaffold0069 (78-156)||(50075-50151)
[»] scaffold0015 (2 HSPs)
scaffold0015 (76-130)||(17158-17211)
scaffold0015 (76-132)||(16851-16905)
[»] scaffold0376 (2 HSPs)
scaffold0376 (78-134)||(7455-7510)
scaffold0376 (77-132)||(7600-7654)
[»] scaffold0009 (1 HSPs)
scaffold0009 (78-132)||(205687-205740)
[»] scaffold1221 (2 HSPs)
scaffold1221 (75-134)||(1508-1566)
scaffold1221 (81-130)||(1786-1834)
[»] scaffold0002 (1 HSPs)
scaffold0002 (78-183)||(411923-412028)
[»] scaffold0598 (2 HSPs)
scaffold0598 (80-130)||(6609-6659)
scaffold0598 (79-131)||(6877-6927)
[»] scaffold0535 (1 HSPs)
scaffold0535 (78-128)||(10012-10062)
[»] scaffold0035 (1 HSPs)
scaffold0035 (79-130)||(72967-73018)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 39724105 - 39723965
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  39724105 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 39724006  T
Q  174 tttctgatttggaggccc-ccatgtgttttagtgatgatgt 213  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  39724005 tttctgatttggaggccctccatgtgttttagtgatgatgt 39723965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 13026635 - 13026772
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||    
T  13026635 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgcaccccatctttttcccccttt 13026734  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| |||||||||||||||||||||||||    
T  13026735 ctgatttggaggccccccatgtgttttagtgatgatgt 13026772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 22851387 - 22851527
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||     
T  22851387 tttggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccc 22851486  T
Q  174 tttctgatttggaggccc-ccatgtgttttagtgatgatgt 213  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  22851487 tttctgatttggaggccctccatgtgttttagtgatgatgt 22851527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 9823415 - 9823278
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  9823415 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 9823316  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| ||||||||  |||||||||||||||    
T  9823315 ctgatttggaggccccccatgaattttagtgatgatgt 9823278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 9822745 - 9822885
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catctttttcccct 173  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||     
T  9822745 tttggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttccccc 9822844  T
Q  174 tttctgatttggaggcc-cccatgtgttttagtgatgatgt 213  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  9822845 tttctgatttggaggccacccatgtgttttagtgatcatgt 9822885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 13027338 - 13027219
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  13027338 tttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 13027239  T
Q  174 tttctgatttggaggccccc 193  Q
    ||||||||||||||||||||    
T  13027238 tttctgatttggaggccccc 13027219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 3307335 - 3307475
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||||| ||     
T  3307335 tttggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgcaccccatctttttctccc 3307434  T
Q  174 tttctgatttggaggccccc-atgtgttttagtgatgatgt 213  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  3307435 tttctgatttggaggccccctatgtgttttagtgatgatgt 3307475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 39723415 - 39723539
Alignment:
Q  91 ttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttttctgatttggagg- 188  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||     
T  39723415 ttttcacctctatcttttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggc 39723514  T
Q  189 cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||||||||||||||    
T  39723515 cccccatgtgttttagtgatgatgt 39723539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 13937443 - 13937307
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catctttttcccctttt 176  Q
    |||||||||||||||||| ||||||| |||||  |||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||    
T  13937443 ggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgcacctcatccttttcccccttt 13937344  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    ||| |||| ||||||||||||||||||||||||||||    
T  13937343 ctggtttgaaggcccccatgtgttttagtgatgatgt 13937307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 210
Target Start/End: Original strand, 13936723 - 13936853
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||    
T  13936723 ggcttaattgcacttttc-cccctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccc-ttt 13936820  T
Q  177 ctgatttggaggcccccatgtgttttagtgatga 210  Q
    |||||||| ||| | |||| ||||||||||||||    
T  13936821 ctgatttgaagg-ctccatatgttttagtgatga 13936853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 6092777 - 6092911
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||| ||||| |||||||||||||  ||||||||||||||||| ||||| |||||||  || ||||||||||||| ||||||||||||||||    
T  6092777 ggcttaattgca-ttttc-cccctatcttttgtcaattgtgcgattttgcatcccatatttttaattgaacgattttgcaccccatctttttcccctttt 6092874  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    | |||||  ||||||||||||||||||||||||||||    
T  6092875 cagatttaaaggcccccatgtgttttagtgatgatgt 6092911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 15042148 - 15042281
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcac-ccatctttttccccttttctg 179  Q
    ||||||||||||| | ||| |||||||||| ||||||| |||||||||||| ||  ||||||| |||||||||||||| ||||| |||||||| ||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgcacgccatcattttccccctttctg 15042247  T
Q  180 atttggaggcccccatgtgttttagtgatgatgt 213  Q
    ||||  ||| |||| ||||||| |||||||||||    
T  15042248 atttcaaggtccccgtgtgtttcagtgatgatgt 15042281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 41662459 - 41662350
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccct 173  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||||| |  ||||||||||||| ||||||||||| ||||     
T  41662459 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccc 41662360  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  41662359 tttctgattt 41662350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 43245869 - 43245978
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccct 173  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| | ||||| |  ||||||||||||| ||||||||||| ||||     
T  43245869 ttggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccc 43245968  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  43245969 tttctgattt 43245978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 24473822 - 24473716
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg-cacccatctttttcccctttt 176  Q
    ||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||| | || ||  |||||||| |||    
T  24473822 ggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttcccccttt 24473723  T
Q  177 ctgattt 183  Q
    |||||||    
T  24473722 ctgattt 24473716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 37396708 - 37396814
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  |||||  ||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  37396708 ggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37396807  T
Q  177 ctgattt 183  Q
    |||||||    
T  37396808 ctgattt 37396814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 34498620 - 34498503
Alignment:
Q  68 ataattattt-ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctt 165  Q
    |||||||||| |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||| || |||| ||| ||| || ||    
T  34498620 ataattatttaggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatt 34498521  T
Q  166 tttccccttttctgattt 183  Q
    ||||||| ||||||||||    
T  34498520 tttccccctttctgattt 34498503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 15442765 - 15442845
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||| ||||| ||||||| ||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccc 15442845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 16929298 - 16929242
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16929298 ttggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcacccc 16929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 37752082 - 37752146
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  37752082 ttggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccatcttttt 37752146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 22851970 - 22851903
Alignment:
Q  147 gcgattttgcacc-catctttttccccttttctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22851970 gcgattttgcacctcgtctttttccccctttctgatttggaggcccccatgtgttttagtgatgatgt 22851903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 37397208 - 37397121
Alignment:
Q  69 taattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||| ||||||||||||||||||||| |||||||  ||||| |||||||||||||||| ||||||  |||||||||||||| |||||    
T  37397208 taattttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgc 37397121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 6199150 - 6199044
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    ||||||||||||||||||  ||||||  ||||| ||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  6199150 ggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccttt 6199051  T
Q  177 ctgattt 183  Q
    |||||||    
T  6199050 ctgattt 6199044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 15155883 - 15155965
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||    
T  15155883 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 15155965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 765736 - 765825
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt 168  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| |||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatcttttt 765825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 15156241 - 15156132
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccct 173  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||     |||||||||||| ||||||||||| ||||     
T  15156241 ttggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccc 15156142  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  15156141 tttctgattt 15156132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 37752473 - 37752416
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37752473 tttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 37752416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 9623496 - 9623608
Alignment:
Q  72 ttatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcc 170  Q
    |||||||||||||||||||||||   | ||||  ||||| |||||||||||||||||||||||  |||||||||||| ||||||| ||| ||  ||||||    
T  9623496 ttatttggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttcc 9623595  T
Q  171 ccttttctgattt 183  Q
    | |||||||||||    
T  9623596 ctttttctgattt 9623608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 34498120 - 34498204
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||| ||||||||||||||  |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34498120 ttggtttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccc 34498204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 12281124 - 12281215
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt 168  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| | | |||||    ||||||||||||| |||||||||||    
T  12281124 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctctttttttttgagcgattttgcaccccatcttttt 12281215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 16928933 - 16928996
Alignment:
Q  70 aattattt-ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  16928933 aattatttaggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcacccc 16928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 41662521 - 41662599
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| ||| |||  ||||| ||||||||||||||||||| |||  ||||||||||||||||||||    
T  41662521 ggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgc 41662599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 43246230 - 43246176
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  43246230 ggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcacccc 43246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 12281483 - 12281426
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  12281483 tttggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 12281426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 24473340 - 24473421
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||  |||||||  ||||| ||||||| |||||||||||||||  ||||||| ||||||||||||    
T  24473340 tttggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgc 24473421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 43162222 - 43162285
Alignment:
Q  66 taataattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  43162222 taataactatttggcttaattgcacttttc-cccctatattttgttaattgtgcgattttgcacc 43162285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 3464001 - 3463946
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  3464001 ttggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 6198649 - 6198764
Alignment:
Q  69 taattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttt 167  Q
    ||||| || |||||||||||||||||| ||| |||  | | | |||||||||||||||||||| ||  |||||||||||||||||||| ||| ||  |||    
T  6198649 taatttttaggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttt 6198748  T
Q  168 tccccttttctgattt 183  Q
    ||||| ||||||||||    
T  6198749 tccccatttctgattt 6198764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 17431287 - 17431393
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| ||| |||  ||||  |||||||||||||| |||| |||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  17431287 ggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttcccccttt 17431386  T
Q  177 ctgattt 183  Q
    |||||||    
T  17431387 ctgattt 17431393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 20861692 - 20861614
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||| ||||  |||||||  | ||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  20861692 ggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 20861614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 34313762 - 34313817
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  34313762 tttggcttaattgcacttttc--ccctatcttttgttaattgtgcgattttgcacccc 34313817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 15444698 - 15444625
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    ||||||||||||||  |||||||  ||| | |||||||||||||||||||||||  ||||||||||||||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgatttt 15444625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 23123335 - 23123400
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    ||||||||||||||||||||| | |||||||||||  |||||||||||||| |||||||| |||||    
T  23123335 tttggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccatcttttt 23123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 25438789 - 25438848
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat 134  Q
    |||| |||||||||||||||| |||||||  ||||| |||||||||||||||||||||||    
T  25438789 tttgacttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 25438848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 25439176 - 25439102
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||  |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  25439176 ttaattgcacttttt-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 25439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 33727156 - 33727053
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    |||||| |||||||| ||  |||  ||||||||||||||||||||||||  |||  |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  33727156 ttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccctttctg 33727057  T
Q  180 attt 183  Q
    ||||    
T  33727056 attt 33727053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 74688 - 74739
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||    
T  74688 cttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcacccc 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 7127660 - 7127702
Alignment:
Q  85 ttgcacttttcacccctatcttttgctaattgtgcgattttgca 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  7127660 ttgcacttttc-cccctatcttttgctaattgtgcgattttgca 7127702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 154
Target Start/End: Original strand, 16169171 - 16169249
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    |||||||||||||||||||||| || |||  ||||| |||||||| |||||||||| |||  |||||||||||| |||||    
T  16169171 tttggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttt 16169249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 18020140 - 18020088
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||   |||||||||||| ||||||||||||||||||||||    
T  18020140 ggcttaattgcactttta--ccctatcttttgttaattgtgcgattttgcacccc 18020088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 22852009 - 22851958
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    ||||||||| | |||||| ||||||||||||| |||||||||||||||||||    
T  22852009 gcttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 41662107 - 41662161
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||| |||  ||| ||||||||| ||||||||||||||||||||||    
T  41662107 ggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcacccc 41662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 43598790 - 43598756
Alignment:
Q  97 cccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||||||||||||||||||||||    
T  43598790 cccctatcttttgctaattgtgcgattttgcaccc 43598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 183
Target Start/End: Complemental strand, 75016 - 74932
Alignment:
Q  100 ctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttttctgattt 183  Q
    ||||||||||||||||||||||||||||||||| | |||||     |||||||||||| ||||||||||| |||| ||||||||||    
T  75016 ctatcttttgctaattgtgcgattttgcaccccctcttttt-ttttagcgattttgcaccccatctttttgccccctttctgattt 74932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 22786843 - 22786892
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    ||||||||||||||  |||||||||||| ||||||||| |||||||||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 23123567 - 23123517
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||| |  || ||||||||||||||||||||||||||||||||    
T  23123567 cttaattgcactttcc--ccttatcttttgctaattgtgcgattttgcacccc 23123517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 7127877 - 7127779
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccccatgt--ttttaaacgagcgattttgca-cccatctttttccccttttc 177  Q
    ||||||||||||  |||||||||||| |||||||| | ||||||||||||||| |  ||||  | ||||||||||||| |||||||||| ||| |||||    
T  7127877 aattgcacttttaccccctatctttttgctaattgcgtgattttgcaccccatcttcttttttatgagcgattttgcaccccatcttttgcccattttc 7127779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 9465700 - 9465750
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacccc 132  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||||||    
T  9465700 aattgcacttttgccccctatctttttgctaactgtgcgattttgcacccc 9465750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 9465908 - 9465874
Alignment:
Q  98 ccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||| ||||||||||||||||||||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcacccc 9465874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 18019915 - 18019965
Alignment:
Q  83 aattgcacttttcacccctatcttttgc-taattgtgcgattttgcacccc 132  Q
    ||||||||||||  |||||||||||| | ||||||||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcacccc 18019965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 43162588 - 43162539
Alignment:
Q  82 taattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||| |||||||||||||  ||| |||||||||||||||||    
T  43162588 taattgcacttttc-cccctatcttttgtcaatcgtgcgattttgcacccc 43162539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 7127973 - 7127913
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaatt-gtgcgattttgcaccccatgttttta 141  Q
    ||||||||||||||  ||| ||||||||||||||| |||||||||||||||| || ||||||    
T  7127973 ttaattgcacttttttccc-tatcttttgctaatttgtgcgattttgcaccctatcttttta 7127913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 129
Target Start/End: Original strand, 11007584 - 11007613
Alignment:
Q  100 ctatcttttgctaattgtgcgattttgcac 129  Q
    ||||||||||||||||||||||||||||||    
T  11007584 ctatcttttgctaattgtgcgattttgcac 11007613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 15156111 - 15156062
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  15156111 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 767759 - 767720
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtg 118  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  767759 ggcttaattgcacttttc-cccctatcttttgttaattgtg 767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 2856526 - 2856582
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat 134  Q
    |||||||||| | |||||  ||||||  ||||| |||||||||||||||||||||||    
T  2856526 ggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccat 2856582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 3463659 - 3463695
Alignment:
Q  97 cccctatcttttgctaattgtgcgattttgcacccca 133  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  3463659 cccctatcttttgttaattgtgcaattttgcacccca 3463695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 9930879 - 9930831
Alignment:
Q  92 tttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||| ||| ||||||||| ||||||||||||||||||| || |||||||    
T  9930879 tttcccccttatcttttgttaattgtgcgattttgcactccctgttttt 9930831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 37752242 - 37752290
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  37752242 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 9e-60; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 44599486 - 44599626
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  44599486 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 44599585  T
Q  174 tttctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  44599586 tttctgatttggaggccccccatgtgttttagtgatgatgt 44599626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 13863313 - 13863450
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||    
T  13863313 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctcttt 13863412  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| |||||||||||||||||||||||||    
T  13863413 ctgatttggaggccccccatgtgttttagtgatgatgt 13863450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 13864010 - 13863875
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| |||    
T  13864010 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 13863912  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13863911 ctgatttggaggccccgatgtgttttagtgatgatgt 13863875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 44600189 - 44600073
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  44600189 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 44600090  T
Q  177 ctgatttggaggccccc 193  Q
    |||||||||||||||||    
T  44600089 ctgatttggaggccccc 44600073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 8643820 - 8643684
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||    
T  8643820 ggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttttcccccttt 8643721  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||||||| ||||||| ||||||||||| ||||||||    
T  8643720 ctgatttgaaggcccctatgtgttttagcgatgatgt 8643684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 46816365 - 46816229
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||||||||  || ||||||||| | |||| |||||||||||||||||| |||||||||||||||||||| | |||||| |||| ||| |||    
T  46816365 ggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttgtaccccatcatttttccccttt 46816266  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    ||| |||| |||||||||| | ||||| |||||||||    
T  46816265 ctggtttgaaggcccccatatattttaatgatgatgt 46816229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 37888830 - 37888939
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  37888830 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 37888929  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  37888930 tttctgattt 37888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 10533034 - 10533140
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  10533034 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10533133  T
Q  177 ctgattt 183  Q
    |||||||    
T  10533134 ctgattt 10533140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 9035348 - 9035269
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  9035348 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 9035269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 20419378 - 20419272
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  20419378 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 20419279  T
Q  177 ctgattt 183  Q
    |||||||    
T  20419278 ctgattt 20419272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 22740156 - 22740262
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  22740156 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 22740255  T
Q  177 ctgattt 183  Q
    |||||||    
T  22740256 ctgattt 22740262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 37889313 - 37889235
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  37889313 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 37889235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 37972450 - 37972372
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  37972450 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 37972372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 3687712 - 3687604
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccct 173  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| ||||     
T  3687712 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttttgccccc 3687614  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  3687613 tttctgattt 3687604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 9412379 - 9412288
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt 168  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| |||||||||||    
T  9412379 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatcttttt 9412288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 18863970 - 18864073
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    ||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T
Q  180 attt 183  Q
    ||||    
T  18864070 attt 18864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 20418891 - 20418966
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 20418966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 27226002 - 27225943
Alignment:
Q  18 gaatatataatgattagtctcaataatttctcaaagtagcaatagtcataataattattt 77  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  27226002 gaatatataatgattagtcacaataatttcttaaagtagcaatagtcataataattattt 27225943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 3205147 - 3205041
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  ||||||||||||||||||||| |  |||||||||||||||||||| ||| ||  |||||||| |||    
T  3205147 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 3205048  T
Q  177 ctgattt 183  Q
    |||||||    
T  3205047 ctgattt 3205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 17156967 - 17157073
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  |||||||| |||    
T  17156967 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 17157066  T
Q  177 ctgattt 183  Q
    |||||||    
T  17157067 ctgattt 17157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 29292922 - 29293028
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| ||||||||||||||||| |||||  ||| |||||||||||||||| ||| ||  |||||||| |||    
T  29292922 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttcccccttt 29293021  T
Q  177 ctgattt 183  Q
    |||||||    
T  29293022 ctgattt 29293028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 37971960 - 37972038
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| ||||| |  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  37971960 ggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 37972038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 13772958 - 13772901
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  13772958 tttggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 23686410 - 23686510
Alignment:
Q  67 aataattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatcttt 166  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||  | | |||    ||||||||||||||||||||||    
T  23686410 aataattttttggcttaattgcacttttc-cccctatcttttgctaattgtacaattttgcaccctctctatttttttgagcgattttgcacccatcttt 23686508  T
Q  167 tt 168  Q
    ||    
T  23686509 tt 23686510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 29293403 - 29293294
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||| ||||| |||||||  ||||| |||||||||||||||||| ||||  ||| |||||||||||||||| ||| ||  ||||||||     
T  29293403 tttggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttccccc 29293304  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  29293303 tttctgattt 29293294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 13741555 - 13741635
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||| ||||| |||||||  ||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  13741555 ttggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 13741635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 9034867 - 9034974
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca-ccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||| |||| ||||||  |||||||||||||||||||| ||| ||  |||||||| ||    
T  9034867 ggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 9034966  T
Q  176 tctgattt 183  Q
    ||||||||    
T  9034967 tctgattt 9034974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 13744286 - 13744209
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  13744286 ggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 13744209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 13772641 - 13772702
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||| ||||    
T  13772641 ggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccatctttt 13772702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 48359319 - 48359395
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    ||||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||    
T  48359319 tggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 48359395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 18925059 - 18925114
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  18925059 tttggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 22740641 - 22740567
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  22740641 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 22740567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 3687350 - 3687408
Alignment:
Q  75 tttggcttaattgcacttttcacccc-tatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  3687350 tttggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcacccc 3687408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 5349785 - 5349724
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttta 141  Q
    |||||||||||||||||   ||||||||||||| |||||||||||||||||||||||| ||||||    
T  5349785 tggcttaattgcacttt---cccctatcttttgttaattgtgcgattttgcaccccatcttttta 5349724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 5735253 - 5735303
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcac 129  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 9412023 - 9412077
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  9412023 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 9412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 18864455 - 18864350
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||| ||||||| |||||||  ||||| ||||||||||||||||||| |||  ||||||| |||||||||||| ||| ||  |||||||| |||    
T  18864455 ggcttaattgtacttttc-cccctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttcccccttt 18864357  T
Q  177 ctgattt 183  Q
    |||||||    
T  18864356 ctgattt 18864350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 27234005 - 27233947
Alignment:
Q  19 aatatataatgattagtctcaataatttctcaaagtagcaatagtcataataattattt 77  Q
    ||||| |||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  27234005 aatatgtaatgattagttacaatagtttctcaaagtagcaatagtcataataattattt 27233947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 42418591 - 42418669
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||| |||||||| |||||||  ||||||||||||||||||||| | || ||  ||||||||||||||||||||    
T  42418591 ggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgc 42418669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 3204667 - 3204745
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |  ||||||  ||||| |||||||||||||||||||||||  |||||||||||| |||||||    
T  3204667 ttggcttaattgcactttcc--ccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgc 3204745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 23686771 - 23686723
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttg 126  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  23686771 ggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 35079957 - 35080012
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  35079957 tttggcttaattgcacttttc-cccctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 36527854 - 36527746
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctt 174  Q
    |||||||||||||| ||||| | | |||  ||||| |||| |||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| |    
T  36527854 ttggcttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccct 36527755  T
Q  175 ttctgattt 183  Q
    |||||||||    
T  36527754 ttctgattt 36527746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 42419079 - 42418976
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc-atgtttttaaacgagcgattttgcaccc-atctttttccccttttct 178  Q
    ||||||||||||||| |||||||  ||||| ||||||||| ||||||||||| ||  |||||||||||||||||||| ||| ||  |||||||| |||||    
T  42419079 ttaattgcacttttc-cccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttct 42418981  T
Q  179 gattt 183  Q
    |||||    
T  42418980 gattt 42418976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 8953941 - 8953864
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| | ||||| |   |||||||||||||||    
T  8953941 gcttaattgcacttttc-cccctatcttttgttaattgtgcaattttgcaccccctctttttta---agcgattttgcaccc 8953864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 29292098 - 29291990
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atcttttt-cccc 172  Q
    ||||||||||||||||||||  || ||| |||||||||||||||||||||| |||||| | |||||     ||||||||||||||| |||||||| ||||    
T  29292098 tttggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccctcttttt--tttagcgattttgcaccctatctttttgcccc 29292001  T
Q  173 ttttctgattt 183  Q
     ||||||||||    
T  29292000 atttctgattt 29291990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 38191621 - 38191566
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||    
T  38191621 ttggcttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 38826967 - 38826861
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||| ||||| |||||||  ||||  ||||||||||||||||||| |||  |||||||||| || |||||| ||| ||  |||||||| |||    
T  38826967 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttcccccttt 38826868  T
Q  177 ctgattt 183  Q
    |||||||    
T  38826867 ctgattt 38826861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 46815202 - 46815304
Alignment:
Q  112 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgcac-ccatctttttccccttttctgatttggaggcccccatgtgttttagtgatga 210  Q
    |||||||| || ||||| | ||| ||||||||| | |||| |||||| ||||| |||||||| ||||||||||| | || ||||| ||||||||||||||    
T  46815202 aattgtgcaatcttgcatctcatatttttaaacaaacgatcttgcactccatcattttccccctttctgatttgaatgctcccatatgttttagtgatga 46815301  T
Q  211 tgt 213  Q
    |||    
T  46815302 tgt 46815304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 6908213 - 6908265
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  6908213 ggcttaattgcacttttc-cccctatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 15567322 - 15567246
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||||| ||||||||||||||||   ||||||||||||||| ||| |||||    ||||||||||||||||    
T  15567322 ttaattgcacttttcccccctatcttttgcta---gtgcgattttgcaccgcatatttttttttgagcgattttgcaccc 15567246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 18925373 - 18925315
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    |||||||||||||||||  | |||| |||||||||||||||||||||||||||||| ||||    
T  18925373 gcttaattgcacttttc--ctctatattttgctaattgtgcgattttgcaccccatttttt 18925315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 33628714 - 33628653
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    |||| ||||||||||||  || ||||||||| ||||||||||||||||||||||||| ||||    
T  33628714 ggctaaattgcactttttccctctatcttttactaattgtgcgattttgcaccccatctttt 33628653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 27096044 - 27096094
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttg 126  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  27096044 tttggcttaattgcactttcc-cccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 27182259 - 27182209
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttg 126  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  27182259 tttggcttaattgcactttcc-cccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  6908534 ttaattgcactttcc-cccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 183
Target Start/End: Complemental strand, 48359707 - 48359606
Alignment:
Q  82 taattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctga 180  Q
    |||||||||||||  |||||||  ||| | ||||||||||||||||||| |||  ||| |||||||||||||||| ||| ||  |||||||| |||||||    
T  48359707 taattgcacttttt-cccctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctga 48359609  T
Q  181 ttt 183  Q
    |||    
T  48359608 ttt 48359606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 29291803 - 29291860
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||| |||||||||||||||   |||||||||||| ||||| ||||||||||||||||    
T  29291803 tttgacttaattgcactttttctccctatcttttgataattatgcgattttgcacccc 29291860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 34236035 - 34235978
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||| |||||||| | ||||| |  |||||||||||||||||||||||||||||||||    
T  34236035 tttgacttaattgtatttttcccttctatcttttgctaattgtgcgattttgcacccc 34235978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 140
Target Start/End: Complemental strand, 35080254 - 35080215
Alignment:
Q  101 tatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  35080254 tatcttttgttaattgtgcgattttgcaccccatcttttt 35080215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 5735598 - 5735553
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttg 126  Q
    ||||||||||||||  ||||||||||||  ||||||||||||||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 6908440 - 6908391
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    |||||| |||||  |||||||||||| |||||||||||||||||||||||    
T  6908440 aattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 36527387 - 36527451
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacga 146  Q
    ||||||||||||||  |||||||  ||||  |||||||||||||||||||||||  ||||||||||    
T  36527387 ttaattgcacttttt-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacga 36527451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 39983700 - 39983753
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||| ||| ||||||||  ||||| |||||||| |||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcacccc 39983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 16199031 - 16198975
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat 134  Q
    |||||||||||||||||  ||  |||  ||||| |||||||||||||||||||||||    
T  16199031 ggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccat 16198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 30857958 - 30857902
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat 134  Q
    |||||||||||||||||  | | |||||||||  |||||||| ||||||||||||||    
T  30857958 ggcttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcaccccat 30857902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 33628397 - 33628444
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgca 128  Q
    |||||||||||||||| ||  ||||||||||||||||||| ||||||||    
T  33628397 cttaattgcacttttctcct-tatcttttgctaattgtgcaattttgca 33628444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 33829690 - 33829553
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  33829690 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 33829591  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| |||||||||||||||||||||||||    
T  33829590 ctgatttggaggccccccatgtgttttagtgatgatgt 33829553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 33828987 - 33829106
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  33828987 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 33829086  T
Q  174 tttctgatttggaggccccc 193  Q
    ||||||||||||||||||||    
T  33829087 tttctgatttggaggccccc 33829106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 3404043 - 3403936
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttt 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| ||    
T  3404043 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 3403944  T
Q  176 tctgattt 183  Q
    ||||||||    
T  3403943 tctgattt 3403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 3403714 - 3403778
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  3403714 tttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttt 3403778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 10087913 - 10087806
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||    
T  10087913 tggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 10087814  T
Q  176 tctgattt 183  Q
    ||||||||    
T  10087813 tctgattt 10087806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 33974354 - 33974247
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    ||||||||||||| ||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||    
T  33974354 tggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 33974255  T
Q  176 tctgattt 183  Q
    ||||||||    
T  33974254 tctgattt 33974247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 11656847 - 11656782
Alignment:
Q  67 aataattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||  |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11656847 aataatttcttggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcacccc 11656782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 21031979 - 21032069
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt 168  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||    ||||||||||||| |||||||||||    
T  21031979 ggcttaattgcacttttc-cccctaacttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatcttttt 21032069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 7654602 - 7654496
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||||||| || ||||| ||| ||  |||||||| |||    
T  7654602 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttcccccttt 7654503  T
Q  177 ctgattt 183  Q
    |||||||    
T  7654502 ctgattt 7654496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 10039676 - 10039729
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10039676 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 18241854 - 18241908
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18241854 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18241908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 18242213 - 18242103
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccc 172  Q
    ||||||||||||||| ||||   ||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| ||||    
T  18242213 tttggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 18242114  T
Q  173 ttttctgattt 183  Q
     ||||||||||    
T  18242113 ctttctgattt 18242103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 30388051 - 30388111
Alignment:
Q  67 aataattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca 128  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  30388051 aataaatatttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 30388413 - 30388311
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttttct 178  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| |||||    
T  30388413 ttaattgtactttttccccctatcttttgctaattgtgcgattttgcacccccttttttt--ttgagcgattttgcaccccatctttttaccccctttct 30388316  T
Q  179 gattt 183  Q
    |||||    
T  30388315 gattt 30388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 32734053 - 32733972
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||| |||||||||||||||  ||||||  ||||| ||||||||||||||||| |||||  ||||||||||||||||||||    
T  32734053 tttggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgc 32733972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 21032334 - 21032285
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgc 127  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  21032334 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 3825530 - 3825580
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3825530 ttaattgcacttttc-cccctatattttgctaattgtgcgattttgcacccc 3825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 31598778 - 31598720
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||    
T  31598778 ttaattgcacttttc-cccctatcttttgttaattgtgcgattttgcatcccatcttttt 31598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 13579704 - 13579651
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  13579704 ggcttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcacccc 13579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 22684414 - 22684334
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||| ||| |||  ||||| ||||||| |||||||||||||||  |||||||| | |||||||||    
T  22684414 tttggcttaattgcacttttc-cccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgc 22684334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 22754654 - 22754734
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||| ||| |||  ||||| ||||||| |||||||||||||||  |||||||| | |||||||||    
T  22754654 tttggcttaattgcacttttc-cccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgc 22754734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 29074425 - 29074350
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    ||||||||||| |||| | |||||||  ||||| |||||||||||||||||||||||  ||| ||||||||||||||    
T  29074425 ggcttaattgctctttcc-cccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgatttt 29074350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 29079189 - 29079114
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    ||||||||||| |||| | |||||||  ||||| |||||||||||||||||||||||  ||| ||||||||||||||    
T  29079189 ggcttaattgctctttcc-cccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgatttt 29079114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 29106998 - 29106923
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    ||||||||||| |||| | |||||||  ||||| |||||||||||||||||||||||  ||| ||||||||||||||    
T  29106998 ggcttaattgctctttcc-cccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgatttt 29106923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 2762611 - 2762661
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacccc 132  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacccc 2762661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 10039893 - 10039843
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacccc 132  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacccc 10039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 33655168 - 33655115
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||| || ||| ||||||||||||||||||| ||||||||||||    
T  33655168 ggcttaattgcacttgtc-cccttatcttttgctaattgtgcaattttgcacccc 33655115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 12714436 - 12714481
Alignment:
Q  83 aattgcacttttcacccctatcttttgctaattgtgcgattttgca 128  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgca 12714481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 22755142 - 22755065
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||| ||  |||  ||||  |||| |||||||||||||| |||  ||||||||||||||||||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgc 22755065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 31598326 - 31598274
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  31598326 ggcttaattgtatttttc-cctctatcttttgctaattgtgcgattttgcaccc 31598274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 33971992 - 33972047
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||| ||||  ||||||||||||| ||||||| ||||||||||||||    
T  33971992 ttggcttaattgcagttttt-cccctatcttttgttaattgtacgattttgcacccc 33972047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 2354864 - 2354786
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||| ||||| |  ||||  ||||  |||||||||||||||||||||||  ||| |||||||| |||||||    
T  2354864 ggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgc 2354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 11656608 - 11656658
Alignment:
Q  83 aattgcacttttcacccctatc-ttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcacccc 11656658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 2354406 - 2354514
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||| ||||| |||||||  |||   |||||| |||||||||| |||||  ||| |||||||||||||| | ||| ||  ||||||||     
T  2354406 tttggcttaattgcatttttc-cccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttccccc 2354504  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  2354505 tttctgattt 2354514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 2762510 - 2762574
Alignment:
Q  105 ttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catcttttt 168  Q
    |||||||||||||||||||||||||||| | |||||    ||| ||||||||||| |||||||||    
T  2762510 ttttgctaattgtgcgattttgcaccccctctttttttttgagtgattttgcacctcatcttttt 2762574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 3403915 - 3403867
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  3403915 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 11656535 - 11656567
Alignment:
Q  99 cctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||||||| |||||||||||||||    
T  11656535 cctatcttttgctaattatgcgattttgcaccc 11656567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 30388290 - 30388242
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  30388290 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 26842295 - 26842155
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  26842295 tttggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 26842196  T
Q  174 tttctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  26842195 tttctgatttggaggccccccatgtgttttagtgatgatgt 26842155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 2639536 - 2639399
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  2639536 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 2639437  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  2639436 ctgatttggaggccccccatgtgttttagcgatgatgt 2639399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 7591204 - 7591337
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttttctg 179  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 7591303  T
Q  180 atttggaggcccccatgtgttttagtgatgatgt 213  Q
    ||||||||||||||||||||||||| ||||||||    
T  7591304 atttggaggcccccatgtgttttagcgatgatgt 7591337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 26841587 - 26841724
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  26841587 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 26841686  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| ||||||||  |||||||||||||||    
T  26841687 ctgatttggaggccccccatgaattttagtgatgatgt 26841724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 79 - 193
Target Start/End: Original strand, 18296077 - 18296192
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttttc 177  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccttttc 18296176  T
Q  178 tgatttggaggccccc 193  Q
    ||||||||||||||||    
T  18296177 tgatttggaggccccc 18296192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 2638820 - 2638958
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||    
T  2638820 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 2638919  T
Q  177 ctgatttggagg--cccccatgtgttttagtgatgatgt 213  Q
    ||||||||||||  |||||| || |||||||||||||||    
T  2638920 ctgatttggaggcccccccacgtattttagtgatgatgt 2638958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 7591907 - 7591767
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catctttttcccct 173  Q
    |||||||||||||||  |||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  7591907 tttggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatttttttccccc 7591808  T
Q  174 tttctgatttggaggccccc-atgtgttttagtgatgatgt 213  Q
    |||||||||||||||||||| | || |||||||||||||||    
T  7591807 tttctgatttggaggccccctacgtattttagtgatgatgt 7591767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 24832331 - 24832422
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt 168  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| |||||||||||    
T  24832331 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatcttttt 24832422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 11883983 - 11883890
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcac-ccatctttt 167  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||    |||||||||||||| |||||||||    
T  11883983 tttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcactccatctttt 11883890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 37720204 - 37720301
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatctttttccccttt 175  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| || ||  |||||||||||    
T  37720204 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccctatagttttccccttt 37720301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 8851151 - 8851254
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    ||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 8851250  T
Q  180 attt 183  Q
    ||||    
T  8851251 attt 8851254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 30190923 - 30191030
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttt 175  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| ||    
T  30190923 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 30191022  T
Q  176 tctgattt 183  Q
    ||||||||    
T  30191023 tctgattt 30191030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 18296747 - 18296685
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  18296747 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 18296685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 74 - 183
Target Start/End: Complemental strand, 26692878 - 26692768
Alignment:
Q  74 atttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccc 172  Q
    |||||| ||||||||||||||| || ||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||    
T  26692878 atttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccc 26692779  T
Q  173 ttttctgattt 183  Q
     ||||||||||    
T  26692778 ctttctgattt 26692768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 7664730 - 7664621
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    |||||||||||||||||||||  ||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  7664730 tttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 7664631  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  7664630 tttctgattt 7664621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 26737838 - 26737781
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26737838 tttggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 40469780 - 40469676
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttttct 178  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| |||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 40469681  T
Q  179 gattt 183  Q
    |||||    
T  40469680 gattt 40469676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 11883623 - 11883714
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catcttttt 168  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||    |||| |||||||||| |||||||||    
T  11883623 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcaattttgcacctcatcttttt 11883714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 7664248 - 7664354
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  |||   |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  7664248 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 7664347  T
Q  177 ctgattt 183  Q
    |||||||    
T  7664348 ctgattt 7664354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 8851636 - 8851558
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  8851636 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 8851558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 38490895 - 38490758
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttt 175  Q
    ||||||||||||||||| | ||| |||  ||| | ||||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||| ||    
T  38490895 tggcttaattgcactttcctccc-tatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttccccctt 38490797  T
Q  176 tctgatttggaggcccc-catgtgttttagtgatgatgt 213  Q
    | ||||||  ||||||| |||   |||||||||||||||    
T  38490796 tatgatttcaaggcccctcataacttttagtgatgatgt 38490758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 41790966 - 41790888
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||  ||| ||||||||||||||||    
T  41790966 ggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgc 41790888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 17850975 - 17851055
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||| |||||||||||||||    
T  17850975 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgc 17851055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 30191282 - 30191197
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||| | |||||    ||||||||||||||||    
T  30191282 tttggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 30191197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 18296707 - 18296639
Alignment:
Q  147 gcgattttgcaccc-atctttttccccttttctgatttggaggc-ccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18296707 gcgattttgcaccccatctttttccccctttctgatttggaggccccccatgtgttttagtgatgatgt 18296639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 16910826 - 16910905
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||| ||| | |  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  16910826 tggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 16910905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 20347518 - 20347427
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt 168  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||| ||||||||| |||||||||||    
T  20347518 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagggattttgcaccccatcttttt 20347427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 16911321 - 16911217
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg-cacccatctttttccccttttc 177  Q
    ||||||||||||||| | |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||| | || ||  |||||||| ||||    
T  16911321 gcttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttc 16911223  T
Q  178 tgattt 183  Q
    ||||||    
T  16911222 tgattt 16911217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 40469424 - 40469509
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||    
T  40469424 tttggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 40469509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 5378661 - 5378768
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| ||||||||||||||||||||| |  ||| ||||| |||||||||| ||| || |||| |||  |||    
T  5378661 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctcttt 5378760  T
Q  177 ctgatttg 184  Q
    ||||||||    
T  5378761 ctgatttg 5378768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 5380013 - 5379906
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||| | ||||||||||||||||||||| |  ||| ||||| |||||||||| ||| || |||| |||| |||    
T  5380013 ggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttacccccttt 5379914  T
Q  177 ctgatttg 184  Q
    ||||||||    
T  5379913 ctgatttg 5379906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 6171510 - 6171404
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttt 175  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| | |||||    |||| |||||||| ||||||||||| |||| ||    
T  6171510 ggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc-tctttttttttgagcaattttgcaccccatctttttgccccctt 6171412  T
Q  176 tctgattt 183  Q
    ||||||||    
T  6171411 tctgattt 6171404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 7980056 - 7979982
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattt 153  Q
    |||||||||||||||||  || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||    
T  7980056 ggcttaattgcacttttt-cctctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgattt 7979982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 6171154 - 6171207
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  6171154 ttggcttaattgcacttttc-cccctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 6324924 - 6324994
Alignment:
Q  85 ttgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 155  Q
    ||||||||||| |||||||  ||||| ||||||||||||||||| |||||  |||||||||||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttg 6324994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 6325399 - 6325298
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttct 178  Q
    |||||||||||||||| ||| |||  ||||| ||||||||||||||||||| |||  | |||||||||||||||||| ||| ||  |||||||| |||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttct 6325300  T
Q  179 ga 180  Q
    ||    
T  6325299 ga 6325298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 18750178 - 18750102
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||| || |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  18750178 gcttaattgcacttctc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 18750102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 32673193 - 32673090
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct-tttct 178  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||  |||| |||||    
T  32673193 ttaattgcacttttt-cccctatcttttgccaattgtgcgattttgcaccccctatttttttttgagcgattttgcaccccatcttttcgccctctttct 32673095  T
Q  179 gattt 183  Q
    |||||    
T  32673094 gattt 32673090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 183
Target Start/End: Complemental strand, 19141905 - 19141797
Alignment:
Q  74 atttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccc 172  Q
    |||||| ||||||||||||| |  ||||||  ||||| ||||||||||||||||| |||||  ||| |||||||||||||||| ||| ||  ||||||||    
T  19141905 atttggtttaattgcactttcc--ccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttcccc 19141808  T
Q  173 ttttctgattt 183  Q
     ||||||||||    
T  19141807 ctttctgattt 19141797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 26692399 - 26692474
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||  || ||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 26692474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 26737482 - 26737534
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  26737482 ggcttaattgcacttttctcc--tatcttttgctaattgtgcgattttgcacccc 26737534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 17851428 - 17851350
Alignment:
Q  106 tttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctgattt 183  Q
    ||||| |||||||||||||| ||||||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  17851428 tttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 17851350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 20347163 - 20347217
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||| |||||||| || |||||||||| ||||||||||||||||||||||    
T  20347163 ggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc 20347217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 40221311 - 40221364
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  40221311 ttggcttaattgcacctttc-cccctatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 32672839 - 32672924
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||||||||||   || ||||||||| |||||||||||||||||||||  | |||||    ||||||||||||||||    
T  32672839 tttggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccctctctttttttttgagcgattttgcaccc 32672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 6495775 - 6495723
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    ||||||||||||||||||  ||||||||||||  |||||||||||||||||||    
T  6495775 ggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 7979599 - 7979643
Alignment:
Q  112 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  7979599 aattgtgcgattttgcaccccatagttttaaacgagcgattttgc 7979643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 18055050 - 18055100
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  18055050 cttaattgcacttttc-ccccta-cttttgctaattgtgcgattttgcacccc 18055100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 5793450 - 5793525
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||| ||| | |  ||||| ||||||||||||||||| || ||  ||||||||||||||||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgc 5793525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 15920781 - 15920832
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||| |||||||| | ||||||||||| ||||||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcacccc 15920832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 17345721 - 17345785
Alignment:
Q  66 taataattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||  ||| |||||||||||||||  |||||||||||||||||| ||| ||||||||||||    
T  17345721 taataattaaatggtttaattgcacttttc--ccctatcttttgctaattatgcaattttgcacccc 17345785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 41790494 - 41790568
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||| ||||| |||||||  ||||  |||||||||||||||||||||||  ||| ||||||||||||||||    
T  41790494 ttaattgcatttttc-cccctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgc 41790568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 43495309 - 43495356
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgatttt 125  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||    
T  43495309 ggcttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 19141446 - 19141515
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcga 150  Q
    |||||||||||||||  |||||||  ||||| |||||||| ||||||||||||||  ||||||||||||||    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcga 19141515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 43495661 - 43495569
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt 168  Q
    ||||||||||||||||||| | | ||||| |||||||||||||||||||||||| ||| | |||||    ||||||||||||| |||||||||||    
T  43495661 tttggcttaattgcactttcc-cacctatattttgctaattgtgcgattttgcatcccctcttttt-tttgagcgattttgcaccccatcttttt 43495569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatcttt-gttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 17346088 - 17346037
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    |||||||||||||||||  ||  ||||||||||||||||||||||||||||||    
T  17346088 ggcttaattgcacttttt-cctttatcttttgctaattgtgcgattttgcacc 17346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 18055373 - 18055309
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    ||||| ||||||||||||||  || ||| ||||||  ||||||||||||||||||||||| ||||    
T  18055373 tttggtttaattgcactttttccctctaccttttgtcaattgtgcgattttgcaccccatctttt 18055309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  83 aattgcacttttcacccctatc-ttttgctaattgtgcgattttgcacc 130  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 40221538 - 40221443
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccccatgtt-tttaaacgagcgattttgcacc-catctttttccccttt 175  Q
    |||||| |||||  |||||||||||| |||||||||||||||||||||||| | || |||    ||||||||||||||| |||||||| |||||||    
T  40221538 aattgcgcttttgccccctatctttttgctaattgtgcgattttgcaccccttcttctttttttgagcgattttgcacctcatcttttgccccttt 40221443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 15321394 - 15321481
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt 168  Q
    ||||||||||||||||  |||||||||||| ||||||||| |||||||| ||| | ||||     ||||||||||||| |||||||||||    
T  15321394 cttaattgcacttttc--ccctatcttttgttaattgtgcaattttgcatcccctattttattttgagcgattttgcaccccatcttttt 15321481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 15321515 - 15321565
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||||  |||||||||||| | || |||||||||||||||||    
T  15321515 ttaattgcacttttgtcccctatctttttccaactgtgcgattttgcaccc 15321565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 20347390 - 20347341
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  20347390 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 20347341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 30191051 - 30191100
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  30191051 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 30191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 32673069 - 32673020
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  32673069 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 11883751 - 11883799
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  11883751 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 29230282 - 29230334
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    ||||||||||||||||||  | ||||||||||  ||||||| |||||||||||    
T  29230282 ggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 43495535 - 43495484
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgct-aattgtgcgattttgcacccc 132  Q
    ||||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  43495535 ttaattgcacttttc-cccctatctttttgtcaattgtgcgattttgcacccc 43495484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 9e-57; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 76 - 213
Target Start/End: Complemental strand, 50679480 - 50679341
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctt 174  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  50679480 ttggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 50679381  T
Q  175 ttctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  50679380 ttctgatttggaggccccccatgtgttttagtgatgatgt 50679341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 36096532 - 36096392
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||     
T  36096532 tttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccc 36096433  T
Q  174 tttctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  36096432 tttctgatttggaggccccccatgtgttttagtgatgatgt 36096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 36095817 - 36095953
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  36095817 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctatctttttcccc-ttt 36095915  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  36095916 ctgatttggaggccccccatgtattttagtgatgatgt 36095953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 43051306 - 43051169
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||    
T  43051306 ggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctcttt 43051207  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| |||||||||||||||||||||||||    
T  43051206 ctgatttggaggccccccatgtgttttagtgatgatgt 43051169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 50678779 - 50678895
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  50678779 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 50678878  T
Q  177 ctgatttggaggccccc 193  Q
    |||||||||||||||||    
T  50678879 ctgatttggaggccccc 50678895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 43050610 - 43050744
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttttctg 179  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgcaccccatctttttccccctttctg 43050709  T
Q  180 atttggaggccc-ccatgtgttttagtgatgatgt 213  Q
    |||||||||||| ||||||||||||||||||||||    
T  43050710 atttggaggccctccatgtgttttagtgatgatgt 43050744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 45830250 - 45830115
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||    
T  45830250 ggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgcaccccatctttttcccc-ttt 45830152  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  45830151 ctgatttggagccccccatatgttttagtgatgatgt 45830115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 56505693 - 56505830
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||  |||| |||||||| ||||||||||||||| |||    
T  56505693 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 56505792  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    ||| |||| ||| |||||||||||||||||||||||||    
T  56505793 ctggtttgaaggccccccatgtgttttagtgatgatgt 56505830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 47219252 - 47219122
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttttctg 179  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||| || ||||||||||||||    ||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgcaccttatgtttttaaaccagcgattttacaccccatctttttccc----tctg 47219157  T
Q  180 atttggaggccc-ccatgtgttttagtgatgatgt 213  Q
    |||||||||||| ||||||||||||||||||||||    
T  47219156 atttggaggccctccatgtgttttagtgatgatgt 47219122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 56506628 - 56506491
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||| || ||||||||||||  ||||||||||||| |||||| |||||||| |||    
T  56506628 ggcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgcaccccatcattttcccccttt 56506529  T
Q  177 ctgatttggaggcccc-catgtgttttagtgatgatgt 213  Q
    |||||||| ||||||| | |||||||||||||||||||    
T  56506528 ctgatttgaaggcccctcgtgtgttttagtgatgatgt 56506491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 32703707 - 32703568
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||    
T  32703707 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccct 32703608  T
Q  174 tttctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    ||||||||||   || |||||||   ||||||||||||||    
T  32703607 tttctgattttatggtccccatgacatttagtgatgatgt 32703568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 45828994 - 45829130
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||||||| |||| ||||| |||||| |||||||||||| ||||||||||||||   ||    
T  45828994 ggcttaattgtacttttcactcctatcttttaccaattgtgcgattttgtacccaatgttattaaacaagcgattttgcatcccatctttttccctcgtt 45829093  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||||||| | ||| | || |||||||||||||||||    
T  45829094 ctgatttgaatgcctctatatgttttagtgatgatgt 45829130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 16555873 - 16555764
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccct 173  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||||| ||||     
T  16555873 ttggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccc 16555774  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  16555773 tttctgattt 16555764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 4239422 - 4239314
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctt 174  Q
    |||||||||||||||||||  |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| || ||||||||| |    
T  4239422 ttggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttccccct 4239323  T
Q  175 ttctgattt 183  Q
    |||||||||    
T  4239322 ttctgattt 4239314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 28196827 - 28196691
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  28196827 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28196728  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||||||   || |||||||   ||||||||||||||    
T  28196727 ctgattttatggtccccatgacatttagtgatgatgt 28196691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 28196346 - 28196452
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  28196346 ggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28196445  T
Q  177 ctgattt 183  Q
    |||||||    
T  28196446 ctgattt 28196452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 79 - 213
Target Start/End: Original strand, 11529169 - 11529305
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catctttttccccttttc 177  Q
    |||||||||||||||||  ||||| ||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| |||| |||||||  |||     
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgcaccacatcattttccctctttt 11529268  T
Q  178 tgatttggaggcccc-catgtgttttagtgatgatgt 213  Q
    |  |||| || |||| ||| |||||||||||||||||    
T  11529269 tagtttgaagtcccctcatatgttttagtgatgatgt 11529305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 25161879 - 25161983
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttc 177  Q
    ||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 25161978  T
Q  178 tgatt 182  Q
    |||||    
T  25161979 tgatt 25161983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 39744528 - 39744400
Alignment:
Q  69 taattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttt 167  Q
    ||||| || |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||    
T  39744528 taatttttaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttt 39744429  T
Q  168 tccccttttctgatttggaggcccccatg 196  Q
    ||||| |||||||||| | || |||||||    
T  39744428 tccccctttctgattttgtggtccccatg 39744400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 9380307 - 9380413
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||| ||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380406  T
Q  177 ctgattt 183  Q
    |||||||    
T  9380407 ctgattt 9380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 9380795 - 9380689
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||| ||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  9380795 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380696  T
Q  177 ctgattt 183  Q
    |||||||    
T  9380695 ctgattt 9380689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 18077256 - 18077167
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttt 166  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||    ||||||||||||| |||||||||    
T  18077256 ggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctcttttttgttgagcgattttgcatcccatcttt 18077167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 3930533 - 3930427
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttt 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||     |||||||||||| ||||||||||| |||| ||    
T  3930533 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccctt 3930435  T
Q  176 tctgattt 183  Q
    ||||||||    
T  3930434 tctgattt 3930427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 23540307 - 23540200
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    |||||||||||||||||||||||||||  ||||  |||||||||||||||||||| ||  |||||||||||||||||| | ||| ||  |||||||| ||    
T  23540307 tggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttccccctt 23540208  T
Q  176 tctgattt 183  Q
    ||||||||    
T  23540207 tctgattt 23540200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 9023244 - 9023322
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||| ||||||||    
T  9023244 ggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgc 9023322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 9023734 - 9023628
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  |||||||| |||    
T  9023734 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 9023635  T
Q  177 ctgattt 183  Q
    |||||||    
T  9023634 ctgattt 9023628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 32703225 - 32703331
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||| |||||||| |  |||||||||||||||||||| ||| ||  |||||||| |||    
T  32703225 ggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 32703324  T
Q  177 ctgattt 183  Q
    |||||||    
T  32703325 ctgattt 32703331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 169496 - 169415
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||| ||||| |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  169496 tttggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 169415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 169013 - 169092
Alignment:
Q  78 ggcttaattgcacttttcacccc-tatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||| |||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  169013 ggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgc 169092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 293271 - 293152
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catctttttcccctttt 176  Q
    |||||||||||||||||  |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||  ||  |||||||| |||    
T  293271 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttcccccttt 293172  T
Q  177 ctgatttggaggcccccatg 196  Q
    |||||||   ||||||||||    
T  293171 ctgattttatggcccccatg 293152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 39086678 - 39086571
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    ||||||||||||||||||| ||| |||  ||||| |||||||||||||||||||  ||  |||||||||||||||||||| ||| ||  |||||||| ||    
T  39086678 tggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttccccctt 39086579  T
Q  176 tctgattt 183  Q
    ||||||||    
T  39086578 tctgattt 39086571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 13198960 - 13198906
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  13198960 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 13198906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 16555515 - 16555605
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat-gtttttaaacgagcgattttgcacccatctttt 167  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| |  |||||    |||||||||||||||||||||||    
T  16555515 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcacccatctttt 16555605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 26207800 - 26207722
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||| ||||| |||||||  ||||| |||||||||||||||||||||||  ||| ||||||||||||||||    
T  26207800 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgc 26207722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 35393829 - 35393749
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||  | ||||||||||||||||    
T  35393829 ggcttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcaccccctcttttt-tatgagcgattttgcaccc 35393749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 39744030 - 39744136
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||  |||||||  ||| | |||||||||||||| ||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  39744030 ggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttcccccttt 39744129  T
Q  177 ctgattt 183  Q
    |||||||    
T  39744130 ctgattt 39744136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 43292038 - 43292115
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||  |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 43292115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 43292413 - 43292333
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||| ||||| ||||| |  ||||| ||||||||||||||||| |||||  ||||||||||||||||||||    
T  43292413 ttggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgc 43292333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 48405962 - 48406097
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||| ||| ||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  48405962 ggcttaattgcacttttc-cccctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 48406060  T
Q  177 ctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||| ||   || |||||||   ||||||||||||||    
T  48406061 ctgactttatggtccccatgacatttagtgatgatgt 48406097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 8182227 - 8182172
Alignment:
Q  78 ggcttaattgcacttttcacccctatctttt-gctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8182227 ggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcacccc 8182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 292782 - 292860
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||| |||||||| |||||||| | |||  ||||||||||||||||||||    
T  292782 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgc 292860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 26207361 - 26207438
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||| | |||||||  ||||| |||||||||||||||||||||||  ||| ||||||||||||||||    
T  26207361 ggcttaattgcactttcc-cccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgc 26207438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 49178866 - 49178816
Alignment:
Q  82 taattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcacccc 49178816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 24775837 - 24775776
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    |||||||||||||||||| | |||||||||||  ||||||||||||||||||||||| ||||    
T  24775837 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccatctttt 24775776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 11241380 - 11241439
Alignment:
Q  69 taattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca 128  Q
    |||||| ||||||||||||||||||||  || ||||||||| ||||||||||||||||||    
T  11241380 taattaattggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgca 11241439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 11241727 - 11241653
Alignment:
Q  66 taataattattt-ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    ||||||||| || |||||||||| ||||||| |||||||||||||| ||||||| ||||||||||||||| |||||    
T  11241727 taataattaattaggcttaattgtacttttc-cccctatcttttgccaattgtgggattttgcaccccatcttttt 11241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 23539841 - 23539945
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||| |  ||||||  ||||| |||||||||||||||||||||||  ||| |||||| ||||||||| ||| || ||||||| | |||    
T  23539841 ggcttaattgcactttcc--ccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctccttt 23539938  T
Q  177 ctgattt 183  Q
    |||||||    
T  23539939 ctgattt 23539945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 49178527 - 49178574
Alignment:
Q  72 ttatttggcttaattgcacttttcacccctatcttttgctaattgtgc 119  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  49178527 ttatttggcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 39415244 - 39415306
Alignment:
Q  98 ccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||||||||||||||||||||||||  | ||||||   ||||||||||||||||    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccctctctttttatttgagcgattttgcaccc 39415306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 3930176 - 3930260
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||||||||||  ||||||||||||  ||||| |||||||||||||||| | |||||    ||||||||||||||||    
T  3930176 tttggcttaattgcacttttt-cccctatcttttattaattatgcgattttgcaccccctctttttttttgagcgattttgcaccc 3930260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 5205988 - 5206049
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    ||||||||||||||||||  |||||||||||| |||||  ||||||||||||||||| ||||    
T  5205988 ggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcaccccatctttt 5206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 13198606 - 13198711
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat-gtttttaaacgagcgattttgca-cccatcttttt-ccccttttc 177  Q
    ||||||||||||||| ||  |||||||||| ||||||||||||||||||||| |  |||||    ||||||||||||| ||||||||||| |||| ||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccctttc 13198705  T
Q  178 tgattt 183  Q
    ||||||    
T  13198706 tgattt 13198711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 27304716 - 27304770
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||| ||||||  ||||||||| |||||||||||||||||||||||||    
T  27304716 ttggcttaattgcccttttc--ccctatcttctgctaattgtgcgattttgcacccc 27304770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 22681933 - 22681881
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    |||||||||||||||||| | ||||||||||| ||||||||| ||||||||||    
T  22681933 ggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 48406425 - 48406361
Alignment:
Q  92 tttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||| |||||||  ||||| |||||||||||||||||||| ||  ||||||||||||||||||||    
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgc 48406361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 5206284 - 5206222
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    ||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||| || |||||    
T  5206284 tggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccctatcttttt 5206222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 25162348 - 25162261
Alignment:
Q  97 cccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctgattt 183  Q
    ||||||| |||||  ||||||| |||||||||| ||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  25162348 cccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 25162261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 44468958 - 44468899
Alignment:
Q  97 cccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||  ||||| ||||||||||||||||||| |||  ||||||||||||||||||||    
T  44468958 cccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgc 44468899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  79 gcttaattgcacttttcacccctatc-ttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 27304943 - 27304893
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacccc 132  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcacccc 27304893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 8488534 - 8488482
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||| ||  |||||||| |||||||||||||||||||||||    
T  8488534 gcttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcacccc 8488482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 22681576 - 22681628
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||| | |||||||||||||  |||||||||||||||||||||    
T  22681576 gcttaattgcactttcc-cccctatcttttgtcaattgtgcgattttgcacccc 22681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 25225452 - 25225399
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||||| |  | |||||||||||| ||||||||||||||||||||    
T  25225452 ggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 39415578 - 39415490
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcac-ccatcttttt 168  Q
    ||||||| |||||||||  || |||||||||||||||||||| |||||||| ||| | |||||    |||||||||||||| ||||||||||    
T  39415578 ggcttaactgcactttttccctctatcttttgctaattgtgcaattttgcatccctttttttt---tgagcgattttgcactccatcttttt 39415490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 39912054 - 39912158
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatctttttccccttttc 177  Q
    ||||||||||||||||||  ||||||  |||  ||||||||||||||| ||  ||||  |||||||||| ||||||||| || ||  |||||||| ||||    
T  39912054 ggcttaattgcacttttcctccctatagtttattaattgtgcgattttaca-tccatagttttaaacgaacgattttgcccctatagttttccccctttc 39912152  T
Q  178 tgattt 183  Q
    ||||||    
T  39912153 tgattt 39912158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 23432476 - 23432559
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgct-aattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||  ||||||| ||||  | |||||||| ||| |||||||||| |||||||| || | |||||||||||    
T  23432476 ggcttaattgcacttttgccccctatttttttgtcaattgtgcaattctgcaccccatctttttaaatgaacaattttgcaccc 23432559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 5206185 - 5206107
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||| |  |||||||||||| ||||||||||||||||||||| || | |||||    ||||||||||||||||    
T  5206185 aattgcacttcttccccctatctttttgctaattgtgcgattttgcactccctctttttttctgagcgattttgcaccc 5206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 7603146 - 7603197
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||  |||||||||||  ||||||||| ||||||||||||    
T  7603146 gcttaattgcacttttc--ccctatctttttttaattgtgcaattttgcacccc 7603197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 8488188 - 8488242
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||| ||||   || ||||||||| ||||||||||||||||||||||    
T  8488188 ggcttaattgcattttttttccatatcttttgttaattgtgcgattttgcacccc 8488242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 49178644 - 49178694
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacccc 132  Q
    ||||||||||||  |||||||||||| || |||||||||||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 54509150 - 54509116
Alignment:
Q  97 cccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||| |||||||||||||||||||||||||||    
T  54509150 cccctattttttgctaattgtgcgattttgcaccc 54509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 3930406 - 3930357
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  3930406 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 3930357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 23433538 - 23433433
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatctttttccccttttct 178  Q
    |||||||||||||| |  | | |||||||||  |||||||||||| |||| ||  | |||||||  ||||||||||||||||   ||||| ||| |||||    
T  23433538 gcttaattgcacttctgcctcttatcttttgtcaattgtgcgattgtgcatcctttctttttaagtgagcgattttgcaccctcttttttgcccctttct 23433439  T
Q  179 gatttg 184  Q
    ||||||    
T  23433438 gatttg 23433433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 54508815 - 54508868
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||||  | || ||||||||| ||||||| ||||||||||||    
T  54508815 ggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 7603473 - 7603422
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcac 129  Q
    ||||||||||||||||||  ||||||||||||   ||||||||||||||||||    
T  7603473 tggcttaattgcacttttt-cccctatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 39912507 - 39912463
Alignment:
Q  112 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||| |||||  ||||||||||| ||||||||    
T  39912507 aattgtgcgattttgcatcccatagttttaaacgagtgattttgc 39912463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 76 - 213
Target Start/End: Original strand, 6150 - 6288
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctt 174  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||| |    
T  6150 ttggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgcaccccatctttttccccct 6249  T
Q  175 ttctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6250 ttctgatttggaggcccccatgtgttttagtgatgatgt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 6849 - 6712
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 6750  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| |||||||||||||||||||||||||    
T  6749 ctgatttggaggccccccatgtgttttagtgatgatgt 6712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 2e-54; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 76 - 213
Target Start/End: Complemental strand, 18817667 - 18817528
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctt 174  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  18817667 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 18817568  T
Q  175 ttctgatttggag-gcccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||  |||||||||||||||| ||||||||    
T  18817567 ttctgatttggagaccccccatgtgttttagcgatgatgt 18817528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 18816952 - 18817089
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  18816952 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatctttttcccccttt 18817051  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||| |||||| || |||||||||||||||    
T  18817052 ctgatttggaggccccccacgtattttagtgatgatgt 18817089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 11350808 - 11350944
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||    
T  11350808 ggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 11350906  T
Q  177 ctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
     ||||||||||| |||||||||||||||||||||||||    
T  11350907 ttgatttggaggccccccatgtgttttagtgatgatgt 11350944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 11351478 - 11351346
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttttctg 179  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||||||| ||| ||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttacaccccatc-ttttccccctttatg 11351380  T
Q  180 atttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||||||||||||||| |||||||    
T  11351379 atttggaggcccccatgtgttttagtaatgatgt 11351346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 18433013 - 18433122
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccct 173  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||||| ||||     
T  18433013 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccc 18433112  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  18433113 tttctgattt 18433122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 12498558 - 12498673
Alignment:
Q  69 taattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttt 167  Q
    ||||| || |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||    
T  12498558 taatttttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttt 12498657  T
Q  168 tccccttttctgattt 183  Q
    ||||| ||||||||||    
T  12498658 tccccctttctgattt 12498673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 26020450 - 26020557
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catcttttt-ccccttt 175  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||||| ||||||||| |||| ||    
T  26020450 ggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccgcatctttttgccccctt 26020549  T
Q  176 tctgattt 183  Q
    ||||||||    
T  26020550 tctgattt 26020557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 12498982 - 12498876
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||| ||||||||||| ||| ||  |||||||| |||    
T  12498982 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcccccttt 12498883  T
Q  177 ctgattt 183  Q
    |||||||    
T  12498882 ctgattt 12498876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 26571218 - 26571140
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  26571218 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 26571140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 22729492 - 22729388
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttc 177  Q
    ||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||||    
T  22729492 gcttaattgcacttttc-cccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 22729394  T
Q  178 tgattt 183  Q
    ||||||    
T  22729393 tgattt 22729388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 37780799 - 37780718
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  37780799 tttggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgc 37780718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 3888237 - 3888345
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctt 174  Q
    ||||||||||||||| |||| |||||||  ||||| |||||| ||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |    
T  3888237 ttggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 3888336  T
Q  175 ttctgattt 183  Q
    |||||||||    
T  3888337 ttctgattt 3888345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 21207229 - 21207304
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 21207304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 25115757 - 25115864
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttt 175  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| ||    
T  25115757 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccctt 25115856  T
Q  176 tctgattt 183  Q
    ||||||||    
T  25115857 tctgattt 25115864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 25174849 - 25174956
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttt 175  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| ||    
T  25174849 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccctt 25174948  T
Q  176 tctgattt 183  Q
    ||||||||    
T  25174949 tctgattt 25174956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 25175205 - 25175123
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||    
T  25175205 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 25175123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 31569910 - 31569983
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 155  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||    
T  31569910 ttaattgcacttttc-cccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 31569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 34576853 - 34576972
Alignment:
Q  63 tcataataattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-ccca 161  Q
    |||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||    ||||||||||||| ||||    
T  34576853 tcataataattatt-ggtttaattgcactttcc-cccctatcttttgctaattgtgcgattttacaccccatcttttt-tttgagcgattttgcacccca 34576949  T
Q  162 tcttttt-ccccttttctgattt 183  Q
    ||||||| |||| ||||||||||    
T  34576950 tctttttgccccctttctgattt 34576972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 42919305 - 42919410
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    ||||||||||| |||||  ||||||| |||| | |||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||| ||| |||    
T  42919305 ggcttaattgctcttttt-cccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttccccttt 42919403  T
Q  177 ctgattt 183  Q
    |||||||    
T  42919404 ctgattt 42919410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 19514524 - 19514632
Alignment:
Q  77 tggcttaattgcacttttcacccc-tatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctt 174  Q
    ||||||||||||||||| | |||| |||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |    
T  19514524 tggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 19514623  T
Q  175 ttctgattt 183  Q
    |||||||||    
T  19514624 ttctgattt 19514632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 2817152 - 2817247
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    |||||||||||||||  ||||||  ||||| ||||||||||||||||| |||||  |||||||||||||||||||| ||| || ||||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctatatttttccccttt 2817247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 22729006 - 22729112
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatctttttccccttt 175  Q
    |||||||||||||||||||| |||||||  ||||  ||||||||||||||||||  |||  |||||||||||||||||||| || ||  |||||||| ||    
T  22729006 ttggcttaattgcacttttc-cccctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgcccctatagttttccccctt 22729104  T
Q  176 tctgattt 183  Q
    ||||||||    
T  22729105 tctgattt 22729112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 26570724 - 26570835
Alignment:
Q  73 tatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg-cacccatctttttccc 171  Q
    |||| ||||||||| |||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||| | || ||  |||||||    
T  26570724 tattaggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccc 26570823  T
Q  172 cttttctgattt 183  Q
    | ||||||||||    
T  26570824 cctttctgattt 26570835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 18433370 - 18433316
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18433370 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18433316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 19515017 - 19514911
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||  ||||||| ||| ||  |||||||| |||    
T  19515017 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttcccccttt 19514918  T
Q  177 ctgattt 183  Q
    |||||||    
T  19514917 ctgattt 19514911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 22428934 - 22428995
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||    
T  22428934 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccccatcttttt 22428995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 22429249 - 22429188
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  22429249 ggcttaattgcatttttc-cccctatcttttgctaattgtgcgattttgcaccccatcttttt 22429188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 25116115 - 25116061
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  25116115 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 37610202 - 37610279
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||| ||||||| |||||||||||||||  ||||||||||||||||||||    
T  37610202 ggcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgc 37610279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 37780320 - 37780397
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||| ||||||| |||||||||||||||  ||||||||||||||||||||    
T  37780320 ggcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgc 37780397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 43464245 - 43464140
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  ||||||||||||||||||| |||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  43464245 ggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccccttt 43464147  T
Q  177 ctgattt 183  Q
    |||||||    
T  43464146 ctgattt 43464140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 37610674 - 37610594
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||| ||||| | |||||||  ||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  37610674 tttggcttaattgtactttcc-cccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgc 37610594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 3888713 - 3888610
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    ||||||||||||||| | | |||  ||||| |||||| ||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 3888614  T
Q  180 attt 183  Q
    ||||    
T  3888613 attt 3888610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 34577218 - 34577156
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||||    
T  34577218 tggcttaattgcacttttt-cccctatcttttgctaattgtgtgattttgcaccccatcttttt 34577156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 43463759 - 43463833
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||| ||| |||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  43463759 ttaattgcacttttc-cccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 43463833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 16466796 - 16466746
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca 128  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  16466796 ggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 34147564 - 34147458
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||  |||||||  ||||  ||||||||||||||||||| | |  |||||||||||||||||||| ||| ||  |||||||| |||    
T  34147564 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttcccccttt 34147465  T
Q  177 ctgattt 183  Q
    |||||||    
T  34147464 ctgattt 34147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 25941067 - 25940990
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||| | |||||  |||| ||||| |||||||||||| |||||  ||||||||||||||||||||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgc 25940990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 9665560 - 9665617
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||    
T  9665560 ttaattgcacttttc--ccctatcttttgctaattgtgcaattttgcaccccatcttttt 9665617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 23011076 - 23011131
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  23011076 tttggcttaattgcatttttc-cccttatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 12441367 - 12441320
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattt 124  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12441367 tttggcttaattgcacttttc--ccctatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 25940521 - 25940599
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||| ||||  |||||||  ||||  |||||||||||||||||||| ||  ||||||||||||||||||||    
T  25940521 ggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgc 25940599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 41383220 - 41383167
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  41383220 ggcttaattgaacttttc-cccctattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 2817631 - 2817551
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||| |||||||||||||||| |||||||  ||||| |||||||||||||| || || ||  ||||||||||||||||||||    
T  2817631 tttgacttaattgcacttttc-cccctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgc 2817551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 10098991 - 10098919
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    ||||||||||||||| | |||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||    
T  10098991 ttaattgcacttttc-ctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 10098919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 9665882 - 9665828
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  9665882 tttggcttaattccacttttc-cccctatcttttgctaattgtgc-attttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 10098517 - 10098597
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||||  | |||||  ||||  ||||||||||||||||| || ||  ||||||||||||||||||||    
T  10098517 ttggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgc 10098597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 34147173 - 34147245
Alignment:
Q  112 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctgattt 183  Q
    ||||||||||||||||||||| |  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  34147173 aattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctgattt 34147245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 5187884 - 5187805
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca 157  Q
    |||||||||||||||||  ||| ||||||||| ||||||||| |||||||||||| | |||||    |||||||||||||    
T  5187884 ggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccctatttttttttgagcgattttgca 5187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 11317025 - 11316950
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||  || || |  ||||| |||||||||||||||||||||||  ||||||| ||||||||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgc 11316950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 5187551 - 5187613
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||| ||| ||  ||||||| |||||||||| ||||||||||||||||||| |||||    
T  5187551 ggcttaattgtactcttttcccctattttttgctaatcgtgcgattttgcaccccatcttttt 5187613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 16726084 - 16726130
Alignment:
Q  84 attgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    |||||||||||  |||||||||||||| |||||||||||||||||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 33324892 - 33324838
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||  |||||||||||||  ||||||| |||||||||||||    
T  33324892 ggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 41382896 - 41382945
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  41382896 ttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 9869563 - 9869611
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||  ||||||  ||||||||||||||||||||||||||    
T  9869563 ttaattgcacttttcctccctat--tttgctaattgtgcgattttgcaccc 9869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 23011432 - 23011383
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||||  ||| ||||||||| |||||||||||||||||||||    
T  23011432 ttaattgcacttttt-cccttatcttttgttaattgtgcgattttgcaccc 23011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 25115885 - 25115934
Alignment:
Q  83 aattgcacttttcacccctatc-ttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||||||    
T  25115885 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 25174977 - 25175026
Alignment:
Q  83 aattgcacttttcacccctatc-ttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||||||    
T  25174977 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 30401879 - 30401960
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||| |||||||||||||||  | ||||  ||||| |||||| | |||||||| |||||  |||||||| |||||||||||    
T  30401879 tttggtttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgc 30401960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 34576991 - 34577040
Alignment:
Q  81 ttaattgcacttttcacccctatctttt-gctaattgtgcgattttgcac 129  Q
    ||||||||||||||  ||| |||||||| |||||||||||||||||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 18433143 - 18433191
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  18433143 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 41072234 - 41072190
Alignment:
Q  112 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||| ||||||||||||| ||  ||||||||||||||||||||    
T  41072234 aattgtacgattttgcaccctatagttttaaacgagcgattttgc 41072190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 3e-50; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 6002234 - 6002374
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccct 173  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  6002234 tttggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 6002333  T
Q  174 tttctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    ||||||||||||||| ||||||||  |||||||||||||||    
T  6002334 tttctgatttggaggccccccatgaattttagtgatgatgt 6002374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 49284409 - 49284525
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttcccctttt 176  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  49284409 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 49284508  T
Q  177 ctgatttggaggccccc 193  Q
    |||||||||||||||||    
T  49284509 ctgatttggaggccccc 49284525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 6002946 - 6002810
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catctttttccccttttct 178  Q
    ||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatctttttccccctttct 6002847  T
Q  179 gatttggagg--cccccatgtgttttagtgatgatgt 213  Q
    ||||||||||  |||||||||||||||||||||||||    
T  6002846 gatttggaggcccccccatgtgttttagtgatgatgt 6002810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 49285086 - 49284972
Alignment:
Q  101 tatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttttctgatttggagg-cccccatgtg 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  49285086 tatcttttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctgatttggaggccccccatgtg 49284987  T
Q  199 ttttagtgatgatgt 213  Q
    |||||||||||||||    
T  49284986 ttttagtgatgatgt 49284972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 39692054 - 39691948
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| ||||||| |||||  |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| |||    
T  39692054 ggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttcccccttt 39691955  T
Q  177 ctgattt 183  Q
    |||||||    
T  39691954 ctgattt 39691948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 9347123 - 9347232
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  9347123 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 9347222  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  9347223 tttctgattt 9347232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 27172113 - 27172221
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  27172113 tttggcttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 27172211  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  27172212 tttctgattt 27172221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 48105173 - 48105064
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||| ||| |||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  48105173 tttggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 48105074  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  48105073 tttctgattt 48105064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 48190768 - 48190833
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  48190768 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 48190833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 47955306 - 47955413
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttt 175  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| ||    
T  47955306 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 47955405  T
Q  176 tctgattt 183  Q
    ||||||||    
T  47955406 tctgattt 47955413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 32163097 - 32163019
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  32163097 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 32163019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 44911025 - 44911131
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||| | ||||||| |||||| |||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||| |||    
T  44911025 ggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 44911124  T
Q  177 ctgattt 183  Q
    |||||||    
T  44911125 ctgattt 44911131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 13918443 - 13918552
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||  | |||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  13918443 tttggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 13918542  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  13918543 tttctgattt 13918552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 26814691 - 26814800
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    |||||||||||||||||||||  ||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  26814691 tttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 26814790  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  26814791 tttctgattt 26814800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 27172595 - 27172490
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatctttttccccttttc 177  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||||| |||||  |||||||||||||||||||| || ||  |||||||| ||||    
T  27172595 ggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgcccctatagttttccccctttc 27172496  T
Q  178 tgattt 183  Q
    ||||||    
T  27172495 tgattt 27172490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 6703950 - 6703870
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||||| |||||||  ||||| |||||||| ||||||||||||||  ||||||||||||||||||||    
T  6703950 ttggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 6703870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 50430137 - 50430057
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||| ||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  50430137 ttggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 50430057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 50526524 - 50526420
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttct 178  Q
    |||||||||||||||  |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 50526425  T
Q  179 gattt 183  Q
    |||||    
T  50526424 gattt 50526420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 46823846 - 46823949
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    ||||||||||||||| |||||||  ||||| |||||||||||||||||| ||||  |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T
Q  180 attt 183  Q
    ||||    
T  46823946 attt 46823949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 48104681 - 48104784
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    ||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48104780  T
Q  180 attt 183  Q
    ||||    
T  48104781 attt 48104784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 8109047 - 8108985
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  8109047 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatcttttt 8108985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 20480168 - 20480273
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  20480168 ggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 20480266  T
Q  177 ctgattt 183  Q
    |||||||    
T  20480267 ctgattt 20480273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 20480672 - 20480591
Alignment:
Q  71 attatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattt 153  Q
    ||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||| ||  |||||||||||||||||    
T  20480672 attatttggcttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 26815173 - 26815067
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  |||   |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  26815173 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 26815074  T
Q  177 ctgattt 183  Q
    |||||||    
T  26815073 ctgattt 26815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 28633720 - 28633826
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| ||| |||  ||||| |||||| ||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  28633720 ggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28633819  T
Q  177 ctgattt 183  Q
    |||||||    
T  28633820 ctgattt 28633826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 17518658 - 17518551
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatcttttt-cccct 173  Q
    |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    |||| ||||||||||||||||||| ||||     
T  17518658 tttgacttaattgcacttttc-cccctatcttttgccaattgtgcgattttgcaccccctcttttt-tttgagcaattttgcacccatctttttgccccc 17518561  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  17518560 tttctgattt 17518551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 48191409 - 48191348
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  48191409 ggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccatctttt 48191348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 50615677 - 50615569
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||||||||     
T  50615677 tttggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccc 50615579  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  50615578 tttctgattt 50615569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 50623505 - 50623397
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||||||||     
T  50623505 tttggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccc 50623407  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  50623406 tttctgattt 50623397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 22149750 - 22149649
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatctttttccccttttctg 179  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| | | |||||     |||||||||||| ||||||||||| ||| ||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacctccttttttt--tttagcgattttgcaccccatctttttgcccctttctg 22149653  T
Q  180 attt 183  Q
    ||||    
T  22149652 attt 22149649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 49318225 - 49318114
Alignment:
Q  72 ttatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcc 170  Q
    |||||||||||||||||||||| | |||||||  ||||| ||||||||||||||||| |||||  ||| |||||||||||||||| ||| ||  ||||||    
T  49318225 ttatttggcttaattgcactttcc-cccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttcc 49318127  T
Q  171 ccttttctgattt 183  Q
    || ||||||||||    
T  49318126 ccctttctgattt 49318114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 28634208 - 28634105
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    ||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||| ||||||||| ||| ||  |||||||| ||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttctg 28634109  T
Q  180 attt 183  Q
    ||||    
T  28634108 attt 28634105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 31848246 - 31848166
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| | |||||   |||||||||||||||||    
T  31848246 ggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctcttttt--tcgagcgattttgcaccc 31848166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 999578 - 999473
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||   |||| ||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  999578 ggcttaattgcacttttc-cccctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttcccccttt 999480  T
Q  177 ctgattt 183  Q
    |||||||    
T  999479 ctgattt 999473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 6703460 - 6703566
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||  | |||||  ||| | ||||||||||||||||||| |||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  6703460 ggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccctttt 6703559  T
Q  177 ctgattt 183  Q
    |||||||    
T  6703560 ctgattt 6703566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 9347604 - 9347499
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||| | |||||||  ||||| |||||||| ||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  9347604 ggcttaattgcactttcc-cccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9347506  T
Q  177 ctgattt 183  Q
    |||||||    
T  9347505 ctgattt 9347499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 13589712 - 13589659
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13589712 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 47955662 - 47955580
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| | |||||    ||||||||||||||||    
T  47955662 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 47955580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 21687022 - 21687103
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||| |||||||  ||||  |||||||  ||||||||||||||  ||||||||||||||||||||    
T  21687022 tttggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgc 21687103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 4692487 - 4692411
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    |||||||||||||||||  |||||||  ||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  4692487 ggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgatttt 4692411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 42611188 - 42611263
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||| ||| |||  ||||| ||||||||||||||||||| |||  ||||||||||||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgc 42611263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 49317751 - 49317857
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    ||||||||||||||||||| |||||||  ||||| |||||||| |||||||| |||||  |||||||||||||||||| | ||| ||  |||||||| ||    
T  49317751 tggcttaattgcacttttc-cccctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttccccctt 49317849  T
Q  176 tctgattt 183  Q
    ||||||||    
T  49317850 tctgattt 49317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 20371409 - 20371328
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca-ccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||| |||||||  ||||| ||||||||||||||||| ||||||  |||||||||||| |||||||    
T  20371409 tttggcttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgc 20371328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 46824332 - 46824254
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||  | |||||  ||||| |||||||| ||||||||||||||  ||||||||||||||||||||    
T  46824332 ggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 46824254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 50429656 - 50429734
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||| ||||||| ||  |||  ||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  50429656 ggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgc 50429734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 13918920 - 13918843
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||  ||||||  ||||| ||||||||||||||||||| |||  |||||||||| |||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgc 13918843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 42611670 - 42611590
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||| ||||||||||||||| |||||||  ||||  ||||||||||||||||||| |||  |||||||| |||||||||||    
T  42611670 ttggtttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgc 42611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 48191369 - 48191302
Alignment:
Q  147 gcgattttgcaccc-atctttttccccttttctgatttggaggccccc-atgtgttttagtgatgatgt 213  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  48191369 gcgattttgcaccccatcttttcccccttt-ctgatttggaggccccccatgtgttttagtgatgatgt 48191302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 999115 - 999189
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||| |||||||  ||||  ||||||||||||||||| |||||  ||||||||||||||||||||    
T  999115 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgc 999189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 8108724 - 8108775
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcacccc 8108775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 19008804 - 19008697
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  |||   |||||||||||||||||||||||  ||| ||||| || ||||||| ||| ||  |||||||| |||    
T  19008804 ggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttcccccttt 19008705  T
Q  177 ctgatttg 184  Q
    ||||||||    
T  19008704 ctgatttg 19008697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 33085671 - 33085775
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc-catctttttcccctttt 176  Q
    |||||||||| |||||||  |||||| |||||  ||||||  ||||||||||||||||  ||||||||| |||||||||||| |||| |||||| | |||    
T  33085671 ggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcaccccatg--tttaaacgaacgattttgcacctcatccttttcctccttt 33085768  T
Q  177 ctgattt 183  Q
    |||||||    
T  33085769 ctgattt 33085775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 17518303 - 17518384
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||    
T  17518303 ggcttaattgcacctttc-cccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 17518384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 41083264 - 41083211
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  41083264 ggcttaattgcacttttc-cccctatcttttgttagttgtgcgattttgcacccc 41083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 31847898 - 31848002
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atcttttt-ccccttttct 178  Q
    ||||||||||||| | ||| ||||||||||||||||||| |||||||| ||||| |||||    |||||||||||||||| |||||||| |||| |||||    
T  31847898 ttaattgcactttacccccttatcttttgctaattgtgcaattttgcatcccatattttt-tttgagcgattttgcacccgatctttttgccccctttct 31847996  T
Q  179 gatttg 184  Q
    | ||||    
T  31847997 ggtttg 31848002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 21687520 - 21687445
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    |||||||| ||||||||| |||||||  ||||| ||||||||||||||| ||| |||  ||||||||||||||||||    
T  21687520 ggcttaatagcacttttc-cccctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttt 21687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 41082908 - 41083015
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccctt 174  Q
    ||||||||||| ||||||  |||||||||||||| ||||||||||||||||| ||| | |||||     |||||||||||| ||||||||||| |||| |    
T  41082908 tggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctcttttt-ttttagcgattttgcaccccatctttttgccccct 41083006  T
Q  175 ttctgattt 183  Q
    |||||||||    
T  41083007 ttctgattt 41083015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 48190811 - 48190879
Alignment:
Q  147 gcgattttgcaccc-atctttttccccttttctgatttggagg-cccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||| |||||||||||| ||||| ||||||||| ||||||||  |||||||||||||||    
T  48190811 gcgattttgcaccccatctttttccccctttctaatttggaggccccccatgaattttagtgatgatgt 48190879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 1176716 - 1176766
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca 128  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  1176716 tggcttaattgcactttcc-cccctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 1177069 - 1177018
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||  |||||||||| ||||||||||| ||||||||||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcacccc 1177018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 20371040 - 20371116
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||| |  ||||||  ||||  |||||||| ||||||||||||||  ||||||||||||||||||||    
T  20371040 ggcttaattgcactttcc--ccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 20371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 44911488 - 44911413
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||| ||||  |||||||  ||||| |||||||||||||||||||| ||  ||| ||||||||||||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgc 44911413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 49318499 - 49318421
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    ||||||||||||||| ||||| |||||||  |||   ||||||||||||||||| |||||  ||||||||||||||||||    
T  49318499 tttggcttaattgcatttttc-cccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgatttt 49318421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 22149403 - 22149455
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  22149403 ggcttaattgcacttttc-cccctatctttgg-taattgtgcgattttgcacccc 22149455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 47498298 - 47498377
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||| |  ||||||  ||||| |||||||| |||||||| |||||  |||||||| |||||||||||    
T  47498298 tttggcttaattgcactttcc--ccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgc 47498377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 50949148 - 50949237
Alignment:
Q  65 ataataattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    |||||| || ||||| ||||||| ||||||| | |||||  | ||| ||||||||||||||||||| |||  ||| ||||||||||||||    
T  50949148 ataatatttttttggtttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    ||||||||||||||| |  |||||||||||||||||| ||||||||||||||    
T  46056904 gcttaattgcactttcc--ccctatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 1176839 - 1176890
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||  |||||||||||||  |||||||| ||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcacccc 1176890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 24671283 - 24671338
Alignment:
Q  105 ttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||| |||||||||||||||||| ||||  ||||||  ||||||||||||||||    
T  24671283 ttttgccaattgtgcgattttgcactccatccttttaattgagcgattttgcaccc 24671338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 22149630 - 22149580
Alignment:
Q  81 ttaattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 48313846 - 48313792
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||| ||||||  ||  ||||||||||||||||||| ||||||||||||    
T  48313846 ggcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccc 48313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 50949615 - 50949541
Alignment:
Q  82 taattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||| | |||||||  ||||  ||||||||||||||||| | |||  ||| ||||||||||||||||    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgc 50949541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 17518530 - 17518481
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  17518530 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 39690794 - 39690847
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||| ||||||||||  ||||||| ||| || ||||||||||||||||||||    
T  39690794 ggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 47955434 - 47955483
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  47955434 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 47955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 50615240 - 50615289
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgc 127  Q
    |||||||||||||||||| |||||||  ||||  ||||||||||||||||    
T  50615240 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 50623068 - 50623117
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgc 127  Q
    |||||||||||||||||| |||||||  ||||  ||||||||||||||||    
T  50623068 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 47498547 - 47498492
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatg 135  Q
    ||||||||||||||||| |||||||  ||||  ||||||||| ||||||||||||||    
T  47498547 gcttaattgcacttttc-cccctatagtttgtcaattgtgcggttttgcaccccatg 47498492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 1928484 - 1928351
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    ||||||||| |||||  ||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||||||||| ||| |||||||||||||||    
T  1928484 ttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctatccttttccccttttctg 1928386  T
Q  180 atttgga-ggcccccatgtgttttagtgatgatgt 213  Q
     |||| | ||||||||| |||||||||||||||||    
T  1928385 gtttgaagggcccccatatgttttagtgatgatgt 1928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 8314011 - 8314119
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctt 174  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||| |    
T  8314011 ttggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttccccct 8314110  T
Q  175 ttctgattt 183  Q
    |||||||||    
T  8314111 ttctgattt 8314119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 48159897 - 48160003
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  48159897 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48159996  T
Q  177 ctgattt 183  Q
    |||||||    
T  48159997 ctgattt 48160003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 47871175 - 47871073
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc-atgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |  |||||    |||||||||||||||| |||||||||||||||    
T  47871175 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccccacttttttttttgagcgattttgcaccccatctttttccccttt 47871077  T
Q  176 tctg 179  Q
    ||||    
T  47871076 tctg 47871073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 20969076 - 20968967
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccc 172  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| ||||    
T  20969076 tttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc-tttttttttttgagcgattttgcaccccatctttttgcccc 20968978  T
Q  173 ttttctgattt 183  Q
     ||||||||||    
T  20968977 ctttctgattt 20968967  T

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Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 27238957 - 27238848
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||| ||||||||||||||| || ||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  27238957 tttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccc 27238858  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  27238857 tttctgattt 27238848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 42673352 - 42673244
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||     
T  42673352 tttggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 42673254  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  42673253 tttctgattt 42673244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 48160390 - 48160309
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||| | |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  48160390 tttggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 48160309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 10771523 - 10771629
Alignment:
Q  98 ccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatctttttccccttttctgatttggaggcccccatgt 197  Q
    ||||||||||||  ||||||||||||||  || |||||||||||| ||||||||||| |||| ||| |||| ||| |||||| |||| ||||||||||||    
T  10771523 ccctatcttttgtcaattgtgcgattttttactccatgtttttaaccgagcgattttacacctatcatttttccc-tttctggtttgaaggcccccatgt 10771621  T
Q  198 gttttagt 205  Q
    ||||||||    
T  10771622 gttttagt 10771629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 47666390 - 47666283
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    ||||||||||||||||||| |||||||  ||||| |||||||| ||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||| ||    
T  47666390 tggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 47666291  T
Q  176 tctgattt 183  Q
    ||||||||    
T  47666290 tctgattt 47666283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 40848521 - 40848626
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  40848521 ggcttaattgcacttttc-cccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 40848619  T
Q  177 ctgattt 183  Q
    |||||||    
T  40848620 ctgattt 40848626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 45060925 - 45060863
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||    
T  45060925 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccctatcttttt 45060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 53687888 - 53687994
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||| | ||| ||  |||||||| |||    
T  53687888 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttcccccttt 53687987  T
Q  177 ctgattt 183  Q
    |||||||    
T  53687988 ctgattt 53687994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 3353122 - 3353202
Alignment:
Q  72 ttatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattt 153  Q
    |||||||||||||||||||||||| |||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  3353122 ttatttggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt 3353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 10293966 - 10293909
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  10293966 tttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 10293909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 22429159 - 22429264
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg-cacccatctttttccccttttc 177  Q
    ||||||||||||||||| ||||||| |||||| |||||||||| ||||||||| ||  ||||||||||||||||||| | || ||  |||||||| ||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttc 22429258  T
Q  178 tgattt 183  Q
    ||||||    
T  22429259 tgattt 22429264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 196
Target Start/End: Original strand, 42672977 - 42673096
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    ||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||  |||||||||| ||||||||| ||| ||  |||||||| ||    
T  42672977 tggcttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctt 42673075  T
Q  176 tctgatttggaggcccccatg 196  Q
    | ||||||   ||||||||||    
T  42673076 tatgattttatggcccccatg 42673096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 21896565 - 21896483
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||| ||||  ||||||| |||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  21896565 tggcttaattgcatttttt-cccctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccc 21896483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 18875245 - 18875163
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||| | |||||    ||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctctttttttttgagcgattttgcaccc 18875163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 20968718 - 20968800
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||    
T  20968718 ggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 20968800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 27238465 - 27238571
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||| ||||||| | |||||  ||||| |||||||||||||||||||| ||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  27238465 ggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcccccttt 27238564  T
Q  177 ctgattt 183  Q
    |||||||    
T  27238565 ctgattt 27238571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 40849015 - 40848937
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||| || ||||  ||||| |||||||||||||||||||||||  |||||||| |||||||||||    
T  40849015 ggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgc 40848937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 10348856 - 10348775
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||  | | |||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  10348856 tttggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 10348775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 24485516 - 24485436
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||| ||| |||  ||||| |||||||||||||||||||||||  ||||||| ||||||||||||    
T  24485516 tttggcttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgc 24485436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 36181049 - 36180968
Alignment:
Q  73 tatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    |||| ||||||||||||||||||  ||||||  |||| |||||||||||||||| |||||||  ||||||||||||||||||    
T  36181049 tattaggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgatttt 36180968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 53688359 - 53688251
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccct 173  Q
    ||||||||||||||||||| | |||||||  ||||| |||||||||||||||||| ||||  ||| |||||||||||||||| ||| ||  ||||||||     
T  53688359 tttggcttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttccccc 53688261  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  53688260 tttctgattt 53688251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 10293607 - 10293715
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccctt 174  Q
    ||||||||||||| ||||  |||||||||||||  ||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| |    
T  10293607 tggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 10293706  T
Q  175 ttctgattt 183  Q
    |||||||||    
T  10293707 ttctgattt 10293715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 17372297 - 17372360
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||| |||  ||||||| |||||||||||||||||||||||||||| |||||||    
T  17372297 tggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccctgttttt 17372360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 14016014 - 14015957
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttt 139  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  14016014 ttaattgcacttttcatcc-tatcttttgctaattgtgcgattttgcaccccatctttt 14015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 26007182 - 26007259
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||| ||||| |||||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  26007182 ggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 26007259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 1927769 - 1927834
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||||| |||| |||||||||||||| |||| ||||||||||||||| || |||||    
T  1927769 tttggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccctatcttttt 1927834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  82 taattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 18874882 - 18874935
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18874882 ggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 53766160 - 53766241
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||| ||||||||||||||  | |||||  ||||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  53766160 tttggtttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 53766241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 1927812 - 1927878
Alignment:
Q  147 gcgattttgcaccc-atctttttccccttttctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||||||||||||| ||||||||||||||| ||| |||| |||||||||||| |||||||||||||||    
T  1927812 gcgattttgcaccctatctttttccccttt-ctggtttgaaggcccccatgtattttagtgatgatgt 1927878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 3353597 - 3353527
Alignment:
Q  85 ttgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||| |||||||  ||||| ||||||||||||||||||| |||  ||||||||||||||||||||    
T  3353597 ttgcacttttc-cccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgc 3353527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 3644840 - 3644781
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat 134  Q
    ||||||||||||||| ||||| ||| ||| ||||| ||||||||||||||||||||||||    
T  3644840 tttggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcaccccat 3644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 9027087 - 9027025
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||| |||||||    
T  9027087 tggcttaatttcacttttc-cccctatcttttgctaattgtgcaattttacaccccttgttttt 9027025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 26007670 - 26007567
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttccccttttctg 179  Q
    ||||||||||||||  |||||||  ||||| |||||| |||||||||||  |||  |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccctttctg 26007571  T
Q  180 attt 183  Q
    ||||    
T  26007570 attt 26007567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 42627600 - 42627519
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||| | |||||  | ||||||||||||||||    
T  42627600 tggcttaattgcacttttc-cctctatcttttgctaattgtgtgattttgcatccc-tctttttttatgagcgattttgcaccc 42627519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 28702275 - 28702410
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccatctttttcccctt 174  Q
    |||||||||||| |||||||  || ||||||||||  |||| ||||||||||||| |||| |||||||  ||| |||||||||| ||    ||||||| |    
T  28702275 tttggcttaatttcacttttt-cctctatcttttgtcaattatgcgattttgcactccatatttttaattgagtgattttgcacacaatcctttcccc-t 28702372  T
Q  175 ttctgatttggaggcccccatgtgttttagtgatgatgt 213  Q
    |||||||||| ||||||| |||| |||| ||||||||||    
T  28702373 ttctgatttgaaggcccctatgt-ttttggtgatgatgt 28702410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 45060595 - 45060644
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttg 126  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  45060595 tggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 22429616 - 22429572
Alignment:
Q  112 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  22429616 aattgtgcgattttgcaccccatagttttaaacgagcgattttgc 22429572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 42456215 - 42456171
Alignment:
Q  112 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  42456215 aattgtgcgattttgcaccccatagttttaaacgagcgattttgc 42456171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 13657782 - 13657735
Alignment:
Q  72 ttatttggcttaattgcacttttcacccctatcttttgctaattgtgc 119  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||    
T  13657782 ttatttggcttaattgcacttttctctcatatcttttgctaattgtgc 13657735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 24485049 - 24485096
Alignment:
Q  106 tttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattt 153  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  24485049 tttgccaattgtgcgattttgcaccccatagttttaaacgagcgattt 24485096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 36180556 - 36180660
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg-cacccatctttttcccctttt 176  Q
    ||||||||||||| ||||  ||||||  ||||  ||||||||||||||||| |||||  ||||||||||||||||||| | || ||  |||||||| |||    
T  36180556 ggcttaattgcacatttc--ccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttcccccttt 36180653  T
Q  177 ctgattt 183  Q
    |||||||    
T  36180654 ctgattt 36180660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 44008457 - 44008379
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    |||||||||||||||||||||| || |||  ||||| |||||||| |||||||||| |||  |||||||||||| |||||    
T  44008457 tttggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttt 44008379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 17372645 - 17372594
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||  |||||| |||| |||||||||||||||||||||||    
T  17372645 gcttaattgcacttttc--ccctatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 1101235 - 1101182
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||||| ||| |||||||||||  |||||||||||| |||||    
T  1101235 ggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 47870823 - 47870902
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcg-attttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||  ||||||||||||||||||| |||| |||||||||||| | |||||    ||||||||||||||||    
T  47870823 ggcttaattgcacttttt-cccctatcttttgctaattatgcgaattttgcacccctttttttt---tgagcgattttgcaccc 47870902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 53766633 - 53766580
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||||| |||||||  ||||| |||||||| |||||||||||    
T  53766633 ggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 10348480 - 10348556
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 155  Q
    ||||||||||||||||| ||| |||  ||||  |||||| | |||||||| |||||  |||||||||||||||||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttg 10348556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 13657673 - 13657621
Alignment:
Q  81 ttaattgcacttttcacccctatctttt-gctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||  |||||||||||| || |||||||||||||||||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 23630091 - 23630035
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||| ||||||||||||||  | ||||| ||||| ||||||||||||||||||||||    
T  23630091 ttggtttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccc 23630035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 1100917 - 1100968
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||| ||  ||||||||||||| |||||||||||||| |||||    
T  1100917 cttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccc 1100968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 9026860 - 9026907
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcac 129  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||    
T  9026860 aattgcacttttgccccctatctttttgctaattgtgcgattttgcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 17441117 - 17441066
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcac 129  Q
    |||||||||||| |||||  | |||||||||| |||||||||||||||||||    
T  17441117 ggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 21895657 - 21895720
Alignment:
Q  78 ggcttaattgcacttttcaccc-ctatcttttgctaattgtgcgattttgcaccccatgttttt 140  Q
    |||||||||||||||||  ||| |||| |||||| ||||||| ||||||||||||||| |||||    
T  21895657 ggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccatcttttt 21895720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 8315135 - 8315083
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    |||||||||||||||| | ||||||| |||||  ||||||||||||||||||||    
T  8315135 ggcttaattgcactttcc-cccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 20968946 - 20968897
Alignment:
Q  83 aattgcacttttcacccctatc-ttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||||||    
T  20968946 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 42455790 - 42455839
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgc 127  Q
    |||||||||||||||||| |||||||  ||||  ||||||||||||||||    
T  42455790 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 51213289 - 51213338
Alignment:
Q  60 tagtcataataattatttggcttaattgcactttt-cacccctatctttt 108  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||||    
T  51213289 tagtcataatatttttttggcttaattgcacttttggacccctatctttt 51213338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 3644772 - 3644720
Alignment:
Q  81 ttaattgcacttttcacccctatctt-ttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||  || ||||| | ||||||||||||||||||||||||||    
T  3644772 ttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcacccc 3644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 125
Target Start/End: Complemental strand, 26540904 - 26540876
Alignment:
Q  97 cccctatcttttgctaattgtgcgatttt 125  Q
    |||||||||||||||||||||||||||||    
T  26540904 cccctatcttttgctaattgtgcgatttt 26540876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 47665911 - 47665987
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 154  Q
    |||||||||||||||||  ||| |||  ||||  ||||||||||||||||||| |||  ||| ||||||| ||||||    
T  47665911 ggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgatttt 47665987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 25423 - 25316
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-ccccttt 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| ||    
T  25423 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccatt 25324  T
Q  176 tctgattt 183  Q
    ||||||||    
T  25323 tctgattt 25316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 25295 - 25247
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  25295 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 1e-24; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 438927 - 439012
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||    
T  438927 tttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 439012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 183716 - 183626
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtt-tttaaacgagcgattttgcacccatcttttt 168  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| | || ||||   ||||||||||||||||||||||||    
T  183716 ggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctcttctttatttgagcgattttgcacccatcttttt 183626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 439253 - 439173
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||  ||| |||||||||||||||||||||||||||| ||| | |||||    ||||||||||||||||    
T  439253 ggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctcttttt--ttgagcgattttgcaccc 439173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  183367 ttaattgcacttttc-cccctatcttttgtcaattgtacgattttgcaccc 183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 6751 - 6644
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccctt 174  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| |||| |    
T  6751 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 6653  T
Q  175 ttctgattt 183  Q
    |||||||||    
T  6652 ttctgattt 6644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 6394 - 6448
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6394 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 6448  T

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Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 6623 - 6575
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcacc 130  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  6623 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 330 - 436
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||| |||||||  ||||  ||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  330 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 429  T
Q  177 ctgattt 183  Q
    |||||||    
T  430 ctgattt 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 819 - 739
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||  |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  819 tttggcttaattgcacttttt-cccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgc 739  T

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Target: scaffold0110 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 45867 - 45754
Alignment:
Q  71 attatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt- 168  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| |||||||||||     
T  45867 attattaggcttaattgcacttttc-cccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttg 45769  T
Q  169 ccccttttctgattt 183  Q
    |||| ||||||||||    
T  45768 ccccctttctgattt 45754  T

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Target: scaffold0110; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 45524 - 45618
Alignment:
Q  65 ataataattatttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||| ||  |||||||||||||||||| ||||||||||||| ||||||||||||||||||| || | |||||    ||||||||||||||||    
T  45524 ataataataataaggcttaattgcacttttc-cccctatcttttgttaattgtgcgattttgcactccctctttttttttgagcgattttgcaccc 45618  T

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Target: scaffold0110; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 45733 - 45684
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  45733 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 45684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 1476 - 1367
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgca-cccatcttttt-cccct 173  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||| ||||||||||| ||||     
T  1476 ttggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccc 1377  T
Q  174 tttctgattt 183  Q
    ||||||||||    
T  1376 tttctgattt 1367  T

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Target: scaffold0802; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 1116 - 1200
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc 160  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||    
T  1116 ttggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccc 1200  T

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Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 1346 - 1297
Alignment:
Q  83 aattgcacttttcacccctatctttt-gctaattgtgcgattttgcaccc 131  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  1346 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 185330 - 185250
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||  ||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  185330 ttggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 185250  T

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Target: scaffold0017; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 184840 - 184945
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttg-cacccatctttttccccttttc 177  Q
    ||||||||||||||||| || ||||  ||||  || ||||| ||||||||||||||  ||||||||||||||||||| |||| ||  |||||||| ||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttc 184939  T
Q  178 tgattt 183  Q
    ||||||    
T  184940 tgattt 184945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 38749 - 38643
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atctttttcccctttt 176  Q
    |||||||||||||||||  |||||||  ||||| |||||||||||||||||||||||  | |||||||| ||||||||| ||| ||  |||||||| |||    
T  38749 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttcccccttt 38650  T
Q  177 ctgattt 183  Q
    |||||||    
T  38649 ctgattt 38643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 38285 - 38329
Alignment:
Q  112 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||||    
T  38285 aattgtgcgattttgcatcccatagttttaaatgagcgattttgc 38329  T

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Target: scaffold0029 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 9905 - 10012
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca-ccccatgtttttaaacgagcgattttgcaccc-atctttttccccttt 175  Q
    |||||||||||||||||  |||||||  ||||| |||||||||||||| || ||||||  |||||||||||||||||||| ||| ||  |||||||| ||    
T  9905 ggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 10004  T
Q  176 tctgattt 183  Q
    ||||||||    
T  10005 tctgattt 10012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 19621 - 19698
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||| ||||| ||| |||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  19621 ggcttaattgcaattttc-cccatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 19698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 20097 - 20031
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaac 144  Q
    |||||||||||||||||| ||| |||  ||||  |||||||||||||||| ||||||  ||||||||    
T  20097 ggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaac 20031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 50563 - 50482
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca-ccccatgtttttaaacgagcgattttgc 156  Q
    ||||||||||||||||||||| |||||||  ||||| ||||||||||||||||| ||||||  |||||||||||| |||||||    
T  50563 tttggcttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgc 50482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 50075 - 50151
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 156  Q
    |||||||||||||||| |  ||||||  ||||  |||||||| ||||||||||||||  ||||||||||||||||||||    
T  50075 ggcttaattgcactttcc--ccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 50151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 17211 - 17158
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  17211 ttggcttaattgcacttttc-cccctatcttttgctaattgtgcaattttgcacc 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 16851 - 16905
Alignment:
Q  76 ttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||||  |||||  |||||||||||||||||||||||||| ||||||||    
T  16851 ttggcttaattgcctttttc--ccctatcttttgctaattgtgcgattatgcacccc 16905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 7455 - 7510
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat 134  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  7455 ggcttaattgcacttttt-cccctatcttttgctaattatgcgattttgcaccccat 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 7654 - 7600
Alignment:
Q  77 tggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  7654 tggcttaattgcacttttt-cccctatcttttgctaattgtgcgattttgtacccc 7600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 205687 - 205740
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacccc 132  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  205687 ggcttaattgcatttttctccc-tatcttttgctaattgtgcgattttgcacccc 205740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 1508 - 1566
Alignment:
Q  75 tttggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccat 134  Q
    ||||||||||||||||||||  || ||||||||||| ||||||| |||||||||||||||    
T  1508 tttggcttaattgcacttttt-cctctatcttttgccaattgtgtgattttgcaccccat 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 1834 - 1786
Alignment:
Q  81 ttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  1834 ttaattgcacttttc-cccctatcttttgtttattgtgcgattttgcacc 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 411923 - 412028
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccc-atcttttt-ccccttt 175  Q
    |||||||||||||||| | |||||||||||||  ||||||||||||||||||||| | |||||     ||||||||||||||| |||||||| |||| ||    
T  411923 ggcttaattgcactttac-cccctatcttttgtcaattgtgcgattttgcaccccctcttttt-tttaagcgattttgcaccctatctttttgccccctt 412020  T
Q  176 tctgattt 183  Q
    ||||||||    
T  412021 tctgattt 412028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 6609 - 6659
Alignment:
Q  80 cttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    |||||||||||| ||| ||||||||||||| |||||||| |||||||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcaccc 131  Q
    ||||||||||||||| | |||||||||||||| |||||||| |||||||||||    
T  6927 gcttaattgcactttcc-cccctatcttttgccaattgtgc-attttgcaccc 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 10012 - 10062
Alignment:
Q  78 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttgca 128  Q
    |||||||||||||||||  |||||||||||||| |||||| ||||||||||    
T  10012 ggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 72967 - 73018
Alignment:
Q  79 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttgcacc 130  Q
    ||||||||||| ||||| ||  ||||||||||||||||||| ||||||||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcacc 73018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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