View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12987_low_15 (Length: 307)
Name: NF12987_low_15
Description: NF12987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12987_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 18 - 292
Target Start/End: Original strand, 10976880 - 10977154
Alignment:
| Q |
18 |
agtaggaggacgcaacatgccacaagcttggcctcgttttgatagattatccttatgaatcaaataaattccatgatggatctctagaaagcaatgcaca |
117 |
Q |
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| T |
10976880 |
agtaggaggacgcaacatgccacaagcttggcctcgttttgatagattatccttatgaatgaaataaattccatgatggatctctagaaagcaatgcaca |
10976979 |
T |
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| Q |
118 |
ttccaataggtcgcttcaatgtgttgcagatgatgcgattgaaggagacaccatggaacaccataaccatatggagagggttgaacttgagcacactgtt |
217 |
Q |
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| T |
10976980 |
ttccaataggtcgcttcaatgtgttgcagatgatgcgattgaaggagacaccatggaacaccataaccatatggagagggttgaacttgagcacactgtt |
10977079 |
T |
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| Q |
218 |
gcacatgaggctattcagtttgattttgaggagctcatcttcaaagagcaacaacatgattaatatgctcctttg |
292 |
Q |
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| T |
10977080 |
gcacatgaggctattcagtttgattttgaggagctcatcttcaaagagcaacaacatgattaatatgctcctttg |
10977154 |
T |
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