View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1298_high_3 (Length: 251)

Name: NF1298_high_3
Description: NF1298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1298_high_3
NF1298_high_3
[»] chr5 (52 HSPs)
chr5 (69-251)||(20927718-20927908)
chr5 (192-249)||(38682821-38682878)
chr5 (191-249)||(19550102-19550160)
chr5 (191-249)||(35461712-35461770)
chr5 (186-251)||(16327096-16327161)
chr5 (191-248)||(23662156-23662213)
chr5 (191-248)||(23796375-23796432)
chr5 (186-251)||(35461434-35461499)
chr5 (191-248)||(16327316-16327373)
chr5 (191-251)||(16327373-16327431)
chr5 (191-248)||(40980714-40980771)
chr5 (191-251)||(1996205-1996265)
chr5 (191-251)||(16327161-16327221)
chr5 (191-251)||(23661882-23661942)
chr5 (191-251)||(23796628-23796688)
chr5 (195-251)||(28559302-28559358)
chr5 (191-251)||(28559450-28559510)
chr5 (186-246)||(38680628-38680688)
chr5 (173-251)||(10827380-10827459)
chr5 (173-251)||(20928090-20928169)
chr5 (191-234)||(25456506-25456549)
chr5 (186-249)||(28559233-28559296)
chr5 (191-249)||(25456338-25456396)
chr5 (191-248)||(32361171-32361228)
chr5 (191-251)||(1649345-1649405)
chr5 (186-234)||(15207625-15207673)
chr5 (186-233)||(19550359-19550406)
chr5 (191-246)||(25456554-25456608)
chr5 (189-251)||(10827319-10827381)
chr5 (172-249)||(13169920-13169998)
chr5 (187-249)||(19550158-19550220)
chr5 (172-249)||(35812192-35812270)
chr5 (186-251)||(1996427-1996492)
chr5 (191-248)||(4943239-4943296)
chr5 (167-248)||(12773664-12773744)
chr5 (203-248)||(14604283-14604328)
chr5 (191-247)||(1996371-1996427)
chr5 (186-251)||(14604067-14604128)
chr5 (191-247)||(28022166-28022222)
chr5 (191-251)||(35813572-35813632)
chr5 (190-248)||(12712423-12712480)
chr5 (188-234)||(20181401-20181447)
chr5 (16-54)||(20927663-20927701)
chr5 (191-249)||(36760814-36760872)
chr5 (193-234)||(10074216-10074257)
chr5 (191-251)||(14604128-14604189)
chr5 (167-251)||(17400821-17400906)
chr5 (191-251)||(1996145-1996205)
chr5 (191-251)||(5746158-5746218)
chr5 (191-251)||(7209851-7209911)
chr5 (190-234)||(13170000-13170043)
chr5 (193-249)||(17400550-17400605)
[»] chr3 (68 HSPs)
chr3 (68-163)||(3181040-3181135)
chr3 (187-249)||(47573911-47573973)
chr3 (186-251)||(26724284-26724349)
chr3 (191-251)||(50332707-50332767)
chr3 (173-251)||(39541443-39541522)
chr3 (186-251)||(18020096-18020161)
chr3 (194-251)||(25848572-25848629)
chr3 (191-251)||(25848290-25848350)
chr3 (191-251)||(28813900-28813960)
chr3 (173-249)||(32186447-32186523)
chr3 (191-251)||(36900148-36900208)
chr3 (189-249)||(39714575-39714635)
chr3 (186-249)||(45131437-45131500)
chr3 (172-251)||(25848632-25848713)
chr3 (186-251)||(46337500-46337565)
chr3 (191-251)||(252049-252109)
chr3 (187-251)||(32186521-32186585)
chr3 (172-251)||(47891394-47891474)
chr3 (191-246)||(3169716-3169771)
chr3 (191-246)||(27768309-27768364)
chr3 (191-246)||(32186692-32186747)
chr3 (187-234)||(47573754-47573801)
chr3 (191-234)||(47891172-47891215)
chr3 (191-249)||(18020038-18020096)
chr3 (191-249)||(36667296-36667354)
chr3 (186-243)||(26976374-26976431)
chr3 (186-235)||(36900104-36900153)
chr3 (191-232)||(43650289-43650330)
chr3 (173-249)||(47573679-47573756)
chr3 (184-249)||(49364301-49364366)
chr3 (180-249)||(51833423-51833491)
chr3 (191-251)||(13903078-13903138)
chr3 (191-251)||(14964893-14964952)
chr3 (191-243)||(25848350-25848402)
chr3 (193-233)||(28813843-28813882)
chr3 (190-234)||(36667411-36667455)
chr3 (191-251)||(40286301-40286361)
chr3 (191-251)||(43650210-43650270)
chr3 (167-248)||(47069505-47069588)
chr3 (187-246)||(54343526-54343582)
chr3 (191-230)||(28814033-28814072)
chr3 (192-251)||(30955020-30955078)
chr3 (192-251)||(30970832-30970890)
chr3 (16-54)||(2584007-2584045)
chr3 (191-249)||(5442518-5442576)
chr3 (186-228)||(30954907-30954949)
chr3 (186-228)||(30970719-30970761)
chr3 (188-246)||(36667138-36667196)
chr3 (191-249)||(40209738-40209796)
chr3 (191-237)||(40286475-40286521)
chr3 (195-249)||(47891336-47891390)
chr3 (16-57)||(10922304-10922345)
chr3 (12-57)||(22722422-22722467)
chr3 (16-57)||(25727963-25728004)
chr3 (191-251)||(30954959-30955020)
chr3 (191-251)||(30970771-30970832)
chr3 (191-228)||(36667357-36667394)
chr3 (186-251)||(40286521-40286586)
chr3 (194-251)||(43649990-43650047)
chr3 (186-251)||(47069743-47069808)
chr3 (191-251)||(13903018-13903078)
chr3 (191-251)||(25848512-25848572)
chr3 (186-234)||(28814089-28814137)
chr3 (191-251)||(39714634-39714693)
chr3 (191-235)||(41165797-41165841)
chr3 (191-251)||(47069591-47069651)
chr3 (197-249)||(47891118-47891170)
chr3 (173-249)||(53763568-53763643)
[»] scaffold0157 (3 HSPs)
scaffold0157 (191-251)||(21523-21583)
scaffold0157 (187-251)||(21734-21798)
scaffold0157 (192-249)||(21796-21854)
[»] scaffold0018 (4 HSPs)
scaffold0018 (191-251)||(161679-161739)
scaffold0018 (186-251)||(161402-161467)
scaffold0018 (191-251)||(161467-161527)
scaffold0018 (191-251)||(161619-161679)
[»] chr7 (38 HSPs)
chr7 (191-251)||(6694594-6694653)
chr7 (186-246)||(40951863-40951923)
chr7 (172-251)||(6694744-6694823)
chr7 (173-246)||(40081175-40081249)
chr7 (186-251)||(42312757-42312822)
chr7 (187-248)||(44293989-44294050)
chr7 (191-251)||(11975510-11975570)
chr7 (191-251)||(11975655-11975715)
chr7 (188-251)||(4048427-4048490)
chr7 (190-248)||(4048204-4048262)
chr7 (191-249)||(6222083-6222141)
chr7 (186-248)||(27280886-27280948)
chr7 (191-249)||(27576607-27576665)
chr7 (186-251)||(29710318-29710383)
chr7 (191-248)||(30869677-30869734)
chr7 (191-251)||(27280823-27280883)
chr7 (191-251)||(30869412-30869472)
chr7 (191-234)||(30869631-30869674)
chr7 (191-249)||(29710536-29710594)
chr7 (191-249)||(30662218-30662276)
chr7 (14-56)||(37307871-37307913)
chr7 (198-248)||(43258314-43258364)
chr7 (186-251)||(11975715-11975780)
chr7 (186-251)||(31453056-31453121)
chr7 (191-251)||(6694534-6694594)
chr7 (191-251)||(41666147-41666207)
chr7 (191-251)||(42312822-42312882)
chr7 (186-249)||(27280612-27280675)
chr7 (191-234)||(40951635-40951678)
chr7 (191-249)||(29710596-29710654)
chr7 (194-231)||(3198219-3198256)
chr7 (191-248)||(3198274-3198331)
chr7 (191-248)||(41666207-41666264)
chr7 (186-251)||(41666358-41666423)
chr7 (191-251)||(42313065-42313126)
chr7 (191-251)||(27280677-27280737)
chr7 (191-251)||(27576545-27576605)
chr7 (191-251)||(46713273-46713333)
[»] chr4 (62 HSPs)
chr4 (191-251)||(12498894-12498954)
chr4 (172-251)||(53863593-53863673)
chr4 (187-248)||(50290415-50290476)
chr4 (191-251)||(24369278-24369338)
chr4 (191-251)||(45038390-45038450)
chr4 (172-251)||(25055865-25055944)
chr4 (191-251)||(2469902-2469962)
chr4 (191-251)||(45038450-45038510)
chr4 (191-251)||(53863380-53863440)
chr4 (188-251)||(40146952-40147015)
chr4 (191-249)||(2470124-2470182)
chr4 (186-251)||(2470182-2470247)
chr4 (186-251)||(7245990-7246055)
chr4 (186-251)||(41083052-41083117)
chr4 (187-251)||(12498679-12498743)
chr4 (186-234)||(41083345-41083393)
chr4 (190-249)||(9999506-9999565)
chr4 (191-242)||(21321993-21322044)
chr4 (186-249)||(26782509-26782572)
chr4 (191-234)||(45038192-45038235)
chr4 (196-247)||(45787091-45787142)
chr4 (192-249)||(12498623-12498681)
chr4 (191-249)||(12592406-12592464)
chr4 (191-249)||(44057279-44057337)
chr4 (191-245)||(45787311-45787365)
chr4 (186-251)||(19156568-19156633)
chr4 (191-251)||(24684262-24684320)
chr4 (16-57)||(36490592-36490633)
chr4 (194-251)||(40147018-40147074)
chr4 (191-251)||(2788168-2788228)
chr4 (191-251)||(7246055-7246115)
chr4 (191-251)||(7246298-7246358)
chr4 (191-251)||(24684055-24684115)
chr4 (191-251)||(40147176-40147236)
chr4 (191-251)||(41083117-41083177)
chr4 (191-251)||(41083268-41083328)
chr4 (172-247)||(55617628-55617704)
chr4 (172-247)||(55624932-55625008)
chr4 (172-249)||(2787869-2787948)
chr4 (173-251)||(21322044-21322123)
chr4 (186-233)||(24684337-24684384)
chr4 (187-234)||(25056187-25056234)
chr4 (188-251)||(46196110-46196173)
chr4 (186-251)||(11884613-11884679)
chr4 (191-237)||(11884679-11884725)
chr4 (197-251)||(40395313-40395367)
chr4 (189-251)||(53863532-53863594)
chr4 (191-244)||(9999569-9999622)
chr4 (186-251)||(12592464-12592529)
chr4 (13-50)||(12917656-12917693)
chr4 (12-57)||(19479473-19479518)
chr4 (12-57)||(40070964-40071009)
chr4 (186-251)||(40395097-40395162)
chr4 (191-236)||(46196347-46196392)
chr4 (191-251)||(51950755-51950813)
chr4 (191-248)||(55617568-55617625)
chr4 (191-248)||(55624872-55624929)
chr4 (191-251)||(2788108-2788168)
chr4 (172-251)||(9999272-9999352)
chr4 (191-231)||(12697145-12697185)
chr4 (174-233)||(14984063-14984123)
chr4 (203-251)||(51950545-51950593)
[»] chr2 (30 HSPs)
chr2 (191-249)||(31630128-31630186)
chr2 (191-251)||(25895130-25895190)
chr2 (173-251)||(1316020-1316098)
chr2 (173-249)||(14166463-14166540)
chr2 (191-251)||(3876952-3877012)
chr2 (191-251)||(25895190-25895250)
chr2 (191-251)||(44556588-44556648)
chr2 (191-246)||(5009392-5009447)
chr2 (192-251)||(9500969-9501028)
chr2 (186-249)||(43699455-43699518)
chr2 (187-249)||(36217160-36217221)
chr2 (192-246)||(39442508-39442562)
chr2 (167-251)||(11791813-11791898)
chr2 (186-251)||(33847707-33847772)
chr2 (186-251)||(44556523-44556588)
chr2 (191-251)||(36694528-36694588)
chr2 (187-234)||(4189044-4189091)
chr2 (191-246)||(4511627-4511682)
chr2 (191-249)||(5009161-5009220)
chr2 (195-249)||(4511396-4511450)
chr2 (186-250)||(9500903-9500967)
chr2 (191-251)||(31630348-31630408)
chr2 (191-234)||(29379984-29380027)
chr2 (191-249)||(36217219-36217275)
chr2 (12-55)||(40295456-40295499)
chr2 (175-248)||(5009450-5009523)
chr2 (191-249)||(12612449-12612507)
chr2 (186-251)||(25894963-25895028)
chr2 (173-232)||(12001835-12001895)
chr2 (186-234)||(30265378-30265426)
[»] chr6 (34 HSPs)
chr6 (167-251)||(9982648-9982733)
chr6 (173-251)||(21598429-21598508)
chr6 (186-251)||(9982944-9983009)
chr6 (191-251)||(35050855-35050915)
chr6 (173-251)||(21598720-21598799)
chr6 (191-249)||(17136907-17136965)
chr6 (186-251)||(10356536-10356601)
chr6 (187-251)||(17342655-17342719)
chr6 (191-251)||(21598508-21598568)
chr6 (191-251)||(21598660-21598720)
chr6 (191-251)||(24059728-24059788)
chr6 (186-249)||(17136842-17136905)
chr6 (15-57)||(8809329-8809371)
chr6 (191-249)||(9982733-9982791)
chr6 (186-251)||(10356259-10356324)
chr6 (186-251)||(35225396-35225461)
chr6 (184-232)||(3895777-3895825)
chr6 (191-251)||(10356476-10356536)
chr6 (191-249)||(364214-364271)
chr6 (190-248)||(6140447-6140505)
chr6 (191-249)||(17137030-17137088)
chr6 (191-249)||(17342717-17342775)
chr6 (191-233)||(35050758-35050800)
chr6 (16-57)||(15187087-15187128)
chr6 (16-57)||(15473478-15473519)
chr6 (16-57)||(16204786-16204827)
chr6 (167-248)||(17137091-17137172)
chr6 (187-232)||(19557872-19557917)
chr6 (191-232)||(35225461-35225502)
chr6 (191-251)||(10356324-10356384)
chr6 (12-52)||(12215773-12215813)
chr6 (12-52)||(16125027-16125067)
chr6 (12-56)||(32192643-32192687)
chr6 (14-54)||(32193858-32193898)
[»] chr8 (38 HSPs)
chr8 (167-251)||(15564055-15564139)
chr8 (191-251)||(27052668-27052728)
chr8 (187-248)||(20209477-20209538)
chr8 (187-248)||(20229185-20229246)
chr8 (191-248)||(36053064-36053121)
chr8 (191-251)||(41151681-41151741)
chr8 (186-249)||(27052406-27052469)
chr8 (188-246)||(9400106-9400164)
chr8 (191-249)||(24827420-24827478)
chr8 (191-248)||(24793024-24793081)
chr8 (190-251)||(27127937-27127997)
chr8 (167-251)||(41151383-41151468)
chr8 (191-251)||(41151468-41151528)
chr8 (191-234)||(27855560-27855603)
chr8 (174-231)||(24827342-24827400)
chr8 (189-251)||(41151620-41151682)
chr8 (186-251)||(6220181-6220246)
chr8 (191-248)||(6220460-6220517)
chr8 (173-249)||(15563829-15563905)
chr8 (186-251)||(24909678-24909743)
chr8 (191-251)||(6220397-6220457)
chr8 (191-247)||(9399879-9399935)
chr8 (191-251)||(24909618-24909678)
chr8 (191-251)||(27052471-27052531)
chr8 (14-53)||(4263837-4263876)
chr8 (193-248)||(14549963-14550018)
chr8 (190-233)||(16915223-16915266)
chr8 (191-234)||(27052625-27052668)
chr8 (191-249)||(6220246-6220304)
chr8 (18-55)||(9067108-9067145)
chr8 (186-251)||(9399814-9399879)
chr8 (16-57)||(19163532-19163573)
chr8 (189-234)||(24083263-24083307)
chr8 (12-53)||(37117524-37117565)
chr8 (195-251)||(9400041-9400097)
chr8 (187-251)||(15563903-15563967)
chr8 (14-50)||(18533691-18533727)
chr8 (190-234)||(38414655-38414699)
[»] chr1 (25 HSPs)
chr1 (193-248)||(1173290-1173345)
chr1 (187-246)||(2633204-2633263)
chr1 (191-251)||(7489902-7489962)
chr1 (191-243)||(7490022-7490074)
chr1 (191-251)||(18608641-18608701)
chr1 (191-251)||(34173321-34173381)
chr1 (185-251)||(40892573-40892639)
chr1 (186-251)||(52913029-52913094)
chr1 (191-251)||(52913202-52913263)
chr1 (191-251)||(7489962-7490022)
chr1 (187-234)||(26879632-26879679)
chr1 (186-249)||(26879677-26879740)
chr1 (12-57)||(28832167-28832212)
chr1 (186-251)||(33650675-33650740)
chr1 (186-234)||(33650396-33650444)
chr1 (191-251)||(33650615-33650675)
chr1 (191-250)||(2633538-2633597)
chr1 (16-55)||(34632193-34632232)
chr1 (189-251)||(52913093-52913156)
chr1 (191-249)||(18980994-18981052)
chr1 (191-251)||(2633370-2633430)
chr1 (16-56)||(4302476-4302516)
chr1 (194-245)||(18278628-18278677)
chr1 (191-251)||(18981053-18981113)
chr1 (191-251)||(50727646-50727706)
[»] scaffold0279 (2 HSPs)
scaffold0279 (191-249)||(1211-1269)
scaffold0279 (191-251)||(1149-1209)
[»] scaffold0578 (1 HSPs)
scaffold0578 (191-249)||(2457-2516)
[»] scaffold0002 (1 HSPs)
scaffold0002 (186-234)||(12336-12382)


Alignment Details
Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 20927718 - 20927908
Alignment:
Q  69 aatagcaaagaaattgcatctattaaaaaggtcttgattataaggatgttattgtagaaaagaacaacaaccaatagtaaacaacaacacaaatgtccat 168  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  20927718 aatagcaaagaaatagcatctattaaaaaggtcttgattgtaaggatgttattgtagaaaagaacaacaaccaatagtaaacaacaaaacaaatatccat 20927817  T
Q  169 -------agtttaaattacatcat-ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
           | ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20927818 aaaaaaaaatttaaattacatcatgggtcttttaagtttgagatttgtaatagattgatcatttaagttattttagttacacataagtcct 20927908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 38682878 - 38682821
Alignment:
Q  192 ttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  38682878 ttaagtttgaggtttgtaatagattgatccttaaagttattttggttacacataagtc 38682821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 19550102 - 19550160
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  19550102 tttaagtttgaggtttgtaatagattgattctttaagttattttggtgacacataagtc 19550160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 35461770 - 35461712
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  35461770 tttaagtttgaggtttgtaatagattggtcctttaagttattttggtcacacataagtc 35461712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 16327096 - 16327161
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  16327096 ggtcctttaagttagaggtttgtaatagattgatcgtttaagttattttagtcgcacataagtcct 16327161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 23662213 - 23662156
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  23662213 tttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataagt 23662156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 23796375 - 23796432
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  23796375 tttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataagt 23796432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 35461434 - 35461499
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||||| |||| |||||||||||||||| || |||||||||||||    
T  35461434 ggtcctttaagtttgaggtttgtaatatattggtcctttaagttattttggtcacacataagtcct 35461499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 16327373 - 16327316
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||||    
T  16327373 tttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagt 16327316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 16327431 - 16327373
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||    
T  16327431 tttaagtttgaggtttgtaatagattaatcatttaagttattttag--acacataagtcct 16327373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 40980714 - 40980771
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||||||||||||| |||||||||||||  | ||||||||||    
T  40980714 tttaagtttgaggtttgtaatagattgatcatttaagttattttgatcacacataagt 40980771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 1996205 - 1996265
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||| |||||||||||||||  |||||||||||||||| || |||||||||||||    
T  1996205 tttaagtttggggtttgtaatagattagtcctttaagttattttggtcacacataagtcct 1996265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 16327161 - 16327221
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||| || ||||||||||||| || |||||||||||||    
T  16327161 tttaagtttgaggtttgtaacagattggtcgtttaagttattttggtaacacataagtcct 16327221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 23661882 - 23661942
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| ||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  23661882 tttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcct 23661942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 23796688 - 23796628
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| ||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  23796688 tttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcct 23796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 28559302 - 28559358
Alignment:
Q  195 agtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| |||||| |||||||||||||||| || |||||||||||||    
T  28559302 agtttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcct 28559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 28559510 - 28559450
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| ||| |||||| |||||||| |||||||||| |||||||||||||    
T  28559510 tttaagtttgaggtttataacagattggtcctttaaattattttagtcacacataagtcct 28559450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 38680628 - 38680688
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||||| || ||||||||    
T  38680628 ggtcctttaagtttgaagtttgtaatagattgaccctttaagttattttggtcacacataa 38680688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 10827459 - 10827380
Alignment:
Q  173 taaattacatcat-ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||  |||| |||||||||||||||||||||| |||| ||||||||||| |||| || || ||||||||||    
T  10827459 taaattacatcagaggtcatttaagtttgaggtttgtaataaattggtcctttaagttgttttggtcactcataagtcct 10827380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 20928169 - 20928090
Alignment:
Q  173 taaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| ||||| |||||||| |||||||||| ||| |||||  |||||||||||||||| || |||||||||||||    
T  20928169 taaattacaccatgggtcttttaactttgaggtttataacagatttgtcctttaagttattttggtcacacataagtcct 20928090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 25456549 - 25456506
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  25456549 tttaagtttgaggtttgtaatagattggtcctttaagttatttt 25456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 28559233 - 28559296
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||| ||||||||||| |||||||| |||||| |||||||||||||||| ||||| ||||||||    
T  28559233 ggtcctttaagtttgacgtttgtaacagattggtcctttaagttatttttgttacgcataagtc 28559296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 25456338 - 25456396
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||| |||||| |||||||||||||||| || ||| |||||||    
T  25456338 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataagtc 25456396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 32361171 - 32361228
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||| || ||||||||||    
T  32361171 tttaaatttgaagtttgtaatagattgatcatttaagttattttggtcacacataagt 32361228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 1649405 - 1649345
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||||||| ||||||||||||  | || ||||||||||    
T  1649405 tttaagtttgaggtttgtaacagattgatccattaagttattttgatcactcataagtcct 1649345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 15207625 - 15207673
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||    
T  15207625 ggtcttttaagttttatgtttataatagattgatcctttaagttatttt 15207673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 19550406 - 19550359
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattt 233  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||    
T  19550406 ggtcctttaagtttgaggtttgtaacagattgttcctttaagttattt 19550359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 25456608 - 25456554
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  25456608 tttaagtttgaggtttgtaacagattggt-ctttaagttattttagtcacacataa 25456554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 10827381 - 10827319
Alignment:
Q  189 cttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||| || ||| | |||||||    
T  10827381 cttttaagtttgagttttgtaacagattgatcctttaaattattttggtcacaaacaagtcct 10827319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 13169920 - 13169998
Alignment:
Q  172 ttaaattacatcatg-gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||| ||  |||||||||||| ||| |||||||||||||  ||||||||||||| | | |||||||||    
T  13169920 ttaaattacatcatgagtgctttaagtttgagatttataatagattgatcaattaagttattttaatcatacataagtc 13169998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 19550158 - 19550220
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||| ||| ||| |  |||||| ||||||||||||| ||||||||||||||    
T  19550158 gtcttttaagtttgagatttttaacattttgatcatttaagttattttggttacacataagtc 19550220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 35812270 - 35812192
Alignment:
Q  172 ttaaattacatcatg-gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||| ||| ||||| ||| | ||||||||||||||| |||||||| ||||||| || || ||||||||    
T  35812270 ttaaattacatcatgagtcctttaaatttaaagtttgtaatagattggtcctttaaattattttggtcacgcataagtc 35812192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 1996492 - 1996427
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||||||||||||| || |||| | |||||| ||  || |||||||||    
T  1996492 ggtcttttaagtttgaggtttgtaatagattggtcatttatgatattttggtctcagataagtcct 1996427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 4943296 - 4943239
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||| |||||||||||| |||||||| || ||||||||||||| || ||||||||||    
T  4943296 tttaaatttgaggtttgtgatagattggtcatttaagttattttggtcacacataagt 4943239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 12773664 - 12773744
Alignment:
Q  167 atagtttaaattacatcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||| |||||||||| ||  | ||||||||||||| |||||||||||||||||  |||||||||||||  | ||||||||||    
T  12773664 ataggttaaattacagcagaggcttttaagtttgatgtttgtaatagattgat-ttttaagttattttgatcacacataagt 12773744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 14604328 - 14604283
Alignment:
Q  203 gtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||    
T  14604328 gtttgtaatagattggtcctttaagttattttggtcacacataagt 14604283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 1996427 - 1996371
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataag 247  Q
    |||||||||||||||||||| |||||| |||||||| ||||||| || || ||||||    
T  1996427 tttaagtttgaggtttgtaagagattgttcctttaaattattttggtcactcataag 1996371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 14604067 - 14604128
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||| ||||||||||||||||||||||||    |||||||||| || |||||||||||||    
T  14604067 ggtcgtttaaatttgaggtttgtaatagattgatc----aagttattttggtcacacataagtcct 14604128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 28022222 - 28022166
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataag 247  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||| || || ||||||    
T  28022222 tttaagtttgaggtttataataaattgatcatttaagttattttggtcacgcataag 28022166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 35813632 - 35813572
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| |||||||||| |||||  |  ||||||||||||| ||||||||||||||||    
T  35813632 tttaagtttaaggtttgtaacagattagttatttaagttattttggttacacataagtcct 35813572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 12712423 - 12712480
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||| |||||||||||||||||  |||||||||||||  | ||||||||||    
T  12712423 ttttaagtttgatgtttgtaatagattgat-ttttaagttattttgatcacacataagt 12712480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 20181401 - 20181447
Alignment:
Q  188 tcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||| ||||||| |||||||||||||||| |||| ||||||||    
T  20181401 tcttttaaatttgagggttgtaatagattgatcatttatgttatttt 20181447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 20927663 - 20927701
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatccc 54  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  20927663 acaatacataatatatgcaagatccgaggttcaaatccc 20927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 36760872 - 36760814
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||| |||| |||  ||||||||||||  || |||||||||||    
T  36760872 tttaagtttgaggtttgtaacagatagataatttaagttatttcggtcacacataagtc 36760814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 10074257 - 10074216
Alignment:
Q  193 taagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  10074257 taagtttgaggtttgtaacagattgttcatttaagttatttt 10074216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 14604128 - 14604189
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatc-ctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||||||  |||| |||||||| || ||| |||||||||    
T  14604128 tttaagtttgaggtttgtaacagattgatcattttatgttattttggtcacatataagtcct 14604189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 17400906 - 17400821
Alignment:
Q  167 atagtttaaattacatcatg-gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||| |||  ||| |||||||||||| ||||||| | |||| || |||||||||||||  | |||||||||||||    
T  17400906 ataggttaaattacaccataagtcctttaagtttgagatttgtaacatattggtcatttaagttattttgatcacacataagtcct 17400821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 1996145 - 1996205
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||||||| ||||||||  ||||||||||||| || ||| |||| ||||    
T  1996145 tttaagtttgagatttgtaacagattgatattttaagttattttggtcacatataaatcct 1996205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 5746158 - 5746218
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| |||||||||| ||| |||||| || ||||||||||||| || | |||||||||||    
T  5746158 tttaaatttgaggtttataacagattggtcatttaagttattttggtaaaacataagtcct 5746218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 7209851 - 7209911
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||||||||| ||   || ||||||||||||| || |||||||||||||    
T  7209851 tttatgtttgaggtttgtaataaatacgtcatttaagttattttggtcacacataagtcct 7209911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 13170000 - 13170043
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||    
T  13170000 ttttaagtttgaggtttgtaataaattggt-ctttaagttatttt 13170043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 17400550 - 17400605
Alignment:
Q  193 taagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||| ||||||| |||| | |||||||||||||| || |||||||||||    
T  17400550 taagtttgaggtgtgtaataaattggttctttaagttatttt-gtcacacataagtc 17400605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 3181135 - 3181040
Alignment:
Q  68 taatagcaaagaaattgcatctattaaaaaggtcttgattataaggatgttattgtagaaaagaacaacaaccaatagtaaacaacaacacaaatg 163  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3181135 taatagcaaagaaattgcatctattaaaaaggtcttcatcataaggatgttattgtagaaaagaacaacaaccaatagtaaacaacaacacaaatg 3181040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 47573973 - 47573911
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||    
T  47573973 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttggtcacatataagtc 47573911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 26724349 - 26724284
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||    
T  26724349 ggtcctttaagtttgaggtttgtaatagattgattctttaagttattttcgtcacacataagtcct 26724284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 50332767 - 50332707
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  50332767 tttaagtttgatgtttgtaataaattgatcttttaagttattttggttacacataagtcct 50332707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 39541522 - 39541443
Alignment:
Q  173 taaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| || || ||||||||||||||||||||  |||||||||||||||||||||| || ||| |||||||||    
T  39541522 taaattacatcaggggtcctttaagtttgaggtttgtaacggattgatcctttaagttattttggtcacatataagtcct 39541443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 18020161 - 18020096
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||| || | |||||||||||    
T  18020161 ggtcctttaagtttgaggtttgtaatagattgattatttaagttattttggtcaaacataagtcct 18020096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 25848629 - 25848572
Alignment:
Q  194 aagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||    
T  25848629 aagtttgaggtttgtaataaattgatcttttaagttattttaatcacacataagtcct 25848572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 25848290 - 25848350
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| || ||||| |||||||    
T  25848290 tttaagtttgagatttgtaataaattgatcctttaagttattttggtcacacacaagtcct 25848350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 28813900 - 28813960
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||| || |||||||||||||    
T  28813900 tttaagtttgagatttgtaataaattgatcatttaagttattttggtcacacataagtcct 28813960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 32186447 - 32186523
Alignment:
Q  173 taaattacatcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||| |||||| |||| |||||||||||||||||||||| |||| ||||||||| |||||| || |||| ||||||    
T  32186447 taaataacatcagggtcctttaagtttgaggtttgtaatatattggtcctttaagctattttggtcacacctaagtc 32186523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 36900208 - 36900148
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||| |||||||||| |||||||||||||||| |||||||||| |||||    
T  36900208 tttaagtttgagatttataatagattggtcctttaagttattttggttacacataggtcct 36900148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 39714635 - 39714575
Alignment:
Q  189 cttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||  |||||||||||||    
T  39714635 cttttaagtttgaggtttgtaataaattgatcatttaaattattttgattacacataagtc 39714575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 45131437 - 45131500
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||| || ||| |||||||    
T  45131437 ggtcctttaagtttgaggtttgtaacagattgatcatttaagttatttttgtaacatataagtc 45131500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 25848713 - 25848632
Alignment:
Q  172 ttaaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcc-tttaagttattttagttacacataagtcct 251  Q
    |||||||||| ||||| || |||||||||||||||| ||||| |||| ||| ||||||||||||| || |||||||||||||    
T  25848713 ttaaattacaccatgggtcctttaagtttgaggtttataataaattggtccttttaagttattttggtaacacataagtcct 25848632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 46337500 - 46337565
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| | |||||| |||||| ||||||| || |||||||||||||    
T  46337500 ggtcatttaagtttgaggtttgtaacatattgattctttaaattattttggtcacacataagtcct 46337565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 252049 - 252109
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| |||||||||| || ||||||||||||| || |||| ||||||||    
T  252049 tttaagtttgaggtttataatagattggtcatttaagttattttggtcacacgtaagtcct 252109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 32186521 - 32186585
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||  ||| |||| ||||||||||||| || |||||||||||||    
T  32186521 gtcttttaagtttgaggtttataactgatcgatcatttaagttatttttgtaacacataagtcct 32186585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 47891474 - 47891394
Alignment:
Q  172 ttaaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||| || || |||||||||||  ||||||| | |||||||||||||||||||||  | |||||||||||||    
T  47891474 ttaaattacatcaagggtcctttaagtttgaaatttgtaacaaattgatcctttaagttattttgatcacacataagtcct 47891394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 3169716 - 3169771
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    ||||||||| ||||||||||||||||| | ||||||||||||||||| ||| ||||    
T  3169716 tttaagtttaaggtttgtaatagattggttctttaagttattttagtcacatataa 3169771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 27768309 - 27768364
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||  ||||||||||    
T  27768309 tttaagtttgaagtttgtaataggttgatcatttaagttattttgattacacataa 27768364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 32186747 - 32186692
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    |||||||||||||||||||| | ||||||  ||||||||||||| |||||||||||    
T  32186747 tttaagtttgaggtttgtaacatattgatgttttaagttattttggttacacataa 32186692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 47573754 - 47573801
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||    
T  47573754 gtcttttaagtttgaggtttgtaacatattgatcctttaaattatttt 47573801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 47891172 - 47891215
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  47891172 tttaagtttgaggtttgtaccagattgatcctttaagttatttt 47891215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 18020096 - 18020038
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||| |||||| ||| |||||| || ||||||||||||| ||||||||||||||    
T  18020096 tttaagtttaaggtttataacagattggtcgtttaagttattttggttacacataagtc 18020038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 36667354 - 36667296
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||| |||||||||| |||||  |||||||||||||||| || |||||||||||    
T  36667354 tttaagtttaaggtttgtaacagatttgtcctttaagttattttggtcacacataagtc 36667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 26976374 - 26976431
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacaca 243  Q
    |||| |||||||||||||||||||| |||| | |||| ||||||||||| ||||||||    
T  26976374 ggtcctttaagtttgaggtttgtaacagataggtcctctaagttattttggttacaca 26976431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 36900153 - 36900104
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttatttta 235  Q
    |||| ||||||||| |||||||||| ||||||||| ||||||||||||||    
T  36900153 ggtcctttaagtttaaggtttgtaagagattgatcgtttaagttatttta 36900104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 43650330 - 43650289
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatt 232  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  43650330 tttaagtttgaagtttgtaataaattgatcctttaagttatt 43650289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 47573679 - 47573756
Alignment:
Q  173 taaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||| || |||||||||||||||||||| | |||  |||||||| |||||||  | |||||||||||    
T  47573679 taaattacatcatgggtcctttaagtttgaggtttgtaacatattagtcctttaaattatttttatcacacataagtc 47573756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 49364301 - 49364366
Alignment:
Q  184 atggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||| || ||||||| ||||| ||||||| |||||||||||||  ||||| |||||||    
T  49364301 atggtcttttaaattggaggtttataataaattgatcatttaagttattttgtttacatataagtc 49364366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 51833491 - 51833423
Alignment:
Q  180 catcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||| |||||||||||| |||||||||||||||||| | | ||||||||| || | |||||||||    
T  51833491 catcatggt-ttttaagtttgaagtttgtaatagattgatcatgttagttattttggtcatacataagtc 51833423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 13903138 - 13903078
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| |||||||||||||| | ||| ||||||||||||||||| ||| ||||||| ||||    
T  13903138 tttaaatttgaggtttgtaacatattaatcctttaagttattttggttgcacataaatcct 13903078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 14964893 - 14964952
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||||||| |||||| || ||||||||||||| || |||||||||||||    
T  14964893 tttaagtttgag-tttgtaacagattggtcatttaagttattttggtcacacataagtcct 14964952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 25848350 - 25848402
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacaca 243  Q
    ||||||||||||||||||||||||||  ||| |||||||||||| || |||||    
T  25848350 tttaagtttgaggtttgtaatagattagtccgttaagttattttggtcacaca 25848402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 28813843 - 28813882
Alignment:
Q  193 taagtttgaggtttgtaatagattgatcctttaagttattt 233  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  28813843 taagtttgaggtttgtaatagattgat-ctttaagttattt 28813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 36667455 - 36667411
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||||||||||| || ||| |||||||||    
T  36667455 ttttaagtttgaggtttgtaatagattggtcattttagttatttt 36667411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 40286301 - 40286361
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| ||| | |||| |||||||||||||||| || ||||| |||||||    
T  40286301 tttaagtttgaggtttataacatattgttcctttaagttattttggtcacacagaagtcct 40286361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 43650270 - 43650210
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| | ||||||||||   |||||||||||||||| || |||||||||||||    
T  43650270 tttaagtttgagatatgtaatagatgagtcctttaagttattttggtaacacataagtcct 43650210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 47069505 - 47069588
Alignment:
Q  167 atagtttaaattacatcat--ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||| |||||||||| |||  |||| ||||| |||||||||||||| | |||| ||||||||||||||||  | ||||||||||    
T  47069505 ataggttaaattacaccattgggtcctttaaatttgaggtttgtaacatattggtcctttaagttattttgatcacacataagt 47069588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 54343582 - 54343526
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    |||||||||||||||| ||||||| ||||||||  |||||||||||| ||||||||||||    
T  54343582 gtcttttaagtttgag-tttgtaagagattgat--tttaagttatttaagttacacataa 54343526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 230
Target Start/End: Complemental strand, 28814072 - 28814033
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagtta 230  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  28814072 tttaagtttgaggtttgtaatagattggtcatttaagtta 28814033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 30955078 - 30955020
Alignment:
Q  192 ttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||||||| |   ||||||||||||| || |||||||||||||    
T  30955078 ttaagtttgaggtttgtaatagatt-agtgtttaagttattttggtcacacataagtcct 30955020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 30970890 - 30970832
Alignment:
Q  192 ttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||||||| |   ||||||||||||| || |||||||||||||    
T  30970890 ttaagtttgaggtttgtaatagatt-agtgtttaagttattttggtcacacataagtcct 30970832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 2584045 - 2584007
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatccc 54  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  2584045 acaatgcattatatatgcaagatccgaggttcaaatccc 2584007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 5442518 - 5442576
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||||||||  ||||  |||||||||||||||| || ||| |||||||    
T  5442518 tttaagtttgaggtttgtaaatgattcgtcctttaagttattttggtcacagataagtc 5442576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 30954907 - 30954949
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagt 228  Q
    |||| |||||||||| ||||||||||| |||||||||||||||    
T  30954907 ggtcgtttaagtttgtggtttgtaataaattgatcctttaagt 30954949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 30970719 - 30970761
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagt 228  Q
    |||| |||||||||| ||||||||||| |||||||||||||||    
T  30970719 ggtcgtttaagtttgtggtttgtaataaattgatcctttaagt 30970761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 36667138 - 36667196
Alignment:
Q  188 tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    ||||||||||||||||||||||| |||||  ||  |||||||||||| || ||||||||    
T  36667138 tcttttaagtttgaggtttgtaagagattagtctcttaagttattttggtcacacataa 36667196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 40209738 - 40209796
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||| |||||||||| ||||||||||||| |||||||| ||||  | |||||||||||    
T  40209738 tttaaatttgaggtttctaatagattgatcttttaagttgttttgttcacacataagtc 40209796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 40286521 - 40286475
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagt 237  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||||    
T  40286521 tttaagtttgaggtttgtaacagattggtcttttgagttattttagt 40286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 47891390 - 47891336
Alignment:
Q  195 agtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||| || | |||| |||||||||||||||| || |||||||||||    
T  47891390 agtttgaggtttgcaacatattggtcctttaagttattttggtcacacataagtc 47891336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 10922345 - 10922304
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||| ||||||||||||| |||||||| ||||||    
T  10922345 acaatgcataatatatgcaagatccggggttcaaaccccgac 10922304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 22722422 - 22722467
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||||||  |||||||| ||||||||||||| ||||||    
T  22722422 atgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgac 22722467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 25728004 - 25727963
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||| |||||||| |||| |||||||||||||||    
T  25728004 acaatgcataatatatgcaaggtccggggttcaaatcccgac 25727963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 30955020 - 30954959
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatccttt-aagttattttagttacacataagtcct 251  Q
    |||| ||||||| ||||||| |||||| |||||| |||||||||| || |||||||||||||    
T  30955020 tttatgtttgagatttgtaagagattggtccttttaagttattttggtcacacataagtcct 30954959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 30970832 - 30970771
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatccttt-aagttattttagttacacataagtcct 251  Q
    |||| ||||||| ||||||| |||||| |||||| |||||||||| || |||||||||||||    
T  30970832 tttatgtttgagatttgtaagagattggtccttttaagttattttggtcacacataagtcct 30970771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 36667394 - 36667357
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagt 228  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  36667394 tttaagtttgaggtttgtaactgattgatcctttaagt 36667357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 40286586 - 40286521
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||| ||||||||||||||  | ||||||||||||||||||||  |  ||||||||||||    
T  40286586 ggtcctttaaatttgaggtttgtaaccgtttgatcctttaagttatttttatcgcacataagtcct 40286521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 43649990 - 43650047
Alignment:
Q  194 aagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| ||||||||| |||| || ||||||||||||| || |||||||| ||||    
T  43649990 aagtttgagatttgtaataaattggtcttttaagttattttcgtcacacataaatcct 43650047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 47069808 - 47069743
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| |||||| || ||||||| | ||| || ||| |||||||||    
T  47069808 ggtcctttaagtttgaggtttgtaacagattggtcatttaagtgaatttcgtcacatataagtcct 47069743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 13903078 - 13903018
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||| |||||||||||| | |||  || ||||||||||||| |||||| |||||||||    
T  13903078 tttaagtctgaggtttgtaacatattagtcttttaagttattttggttacatataagtcct 13903018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 25848572 - 25848512
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| ||| |||||||||| | |||| |||||||||||||||| || ||||||| |||||    
T  25848572 tttaaattttaggtttgtaacacattggtcctttaagttattttggtcacacatatgtcct 25848512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 28814137 - 28814089
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||| ||||| ||||||||||||||||||||  || |||||||||||||    
T  28814137 ggtcctttaaatttgaggtttgtaatagattagtcttttaagttatttt 28814089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 39714693 - 39714634
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| ||| ||||||||  ||||||||||||| || |||||||| ||||    
T  39714693 tttaagtttgaggtttttaacagattgat-gtttaagttattttggtcacacataaatcct 39714634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 41165841 - 41165797
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttta 235  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||||    
T  41165841 tttaaatttgaggtttgttataaattgattctttaagttatttta 41165797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 47069591 - 47069651
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||||||| | |||| | |||| ||||||||| || |||||||||||||    
T  47069591 tttaagtttgagttttgtaacaaattggttcttttagttattttggtcacacataagtcct 47069651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 47891118 - 47891170
Alignment:
Q  197 tttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||| ||||||||| ||||| ||||||| || |||| ||||||    
T  47891118 tttgaggtttgtaacagattgatcttttaaattattttggtcacacctaagtc 47891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 53763643 - 53763568
Alignment:
Q  173 taaattacatcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||| |||| |||||||||||||||||||| ||||| |   |||||||| |||| ||  ||||||||||    
T  53763643 taaattacatca-ggtcctttaagtttgaggtttgtaagagattaacattttaagttgttttggtcgcacataagtc 53763568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 21523 - 21583
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||    
T  21523 tttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcct 21583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 21798 - 21734
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||| ||||||| |||| ||||||| ||||||||||||| || |||||||| ||||    
T  21798 gtcttttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcct 21734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 21854 - 21796
Alignment:
Q  192 ttaagtttgaggtttgtaatagattgatcc-tttaagttattttagttacacataagtc 249  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||| || |||||||||||    
T  21854 ttaaatttgaggtttgtaatagattggtccttttaagttatttttgtcacacataagtc 21796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 161739 - 161679
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||    
T  161739 tttaagtttgatgtttgtaatagattgatcctttaagttattttggtcacacataagtcct 161679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 161402 - 161467
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| |||||| |||||||| ||||||| || |||||||||||||    
T  161402 ggtcctttaagtttgaggtttgtaacagattggtcctttaacttattttggtcacacataagtcct 161467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 161467 - 161527
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||||||| |||||| |||||||| ||||||| || |||||||||||||    
T  161467 tttaagtttgagatttgtaacagattggtcctttaacttatttttgtcacacataagtcct 161527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 161679 - 161619
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| |||||  ||||||| |||||| ||||||| |||||||| || |||||||||||||    
T  161679 tttaaatttgatatttgtaacagattggtcctttaggttattttggtcacacataagtcct 161619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 6694594 - 6694653
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6694594 tttaagtttgtggtttgtaatagattgatcctttaagttatttt-gttacacataagtcct 6694653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 40951923 - 40951863
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  40951923 ggtcgtttaagtttgaggtttgtaatagattgatcatttaagttattttggtcacacataa 40951863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 6694823 - 6694744
Alignment:
Q  172 ttaaattacatcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||| |  |||| |||||||||||||||||||| | |||| |||||||||||||||| || |||||||||||||    
T  6694823 ttaaattacacccgggtcctttaagtttgaggtttgtaacatattggtcctttaagttattttggtcacacataagtcct 6694744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 40081175 - 40081249
Alignment:
Q  173 taaattacatcat-ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    ||||||| ||||| |||| ||||||||| ||| |||||||||||||||| ||||||||||||| |||||||||||    
T  40081175 taaattatatcatcggtcctttaagtttaagggttgtaatagattgatcatttaagttattttggttacacataa 40081249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 42312757 - 42312822
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||||| |||| || ||||||||||||| || |||||||||||||    
T  42312757 ggtcctttaagtttgaggtttgtaatatattggtcatttaagttattttggtcacacataagtcct 42312822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 44294050 - 44293989
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| || ||| ||||||    
T  44294050 gtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagt 44293989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 11975510 - 11975570
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| | ||||||||||||||||||| | || |||||||||||||    
T  11975510 tttaagtttgaggtttgtaacatattgatcctttaagttattgtggtcacacataagtcct 11975570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 11975715 - 11975655
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||  ||||| |||||||||||||||| || |||||||||||||    
T  11975715 tttaagtttgaggtttgtaactgattggtcctttaagttatttttgtcacacataagtcct 11975655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 4048490 - 4048427
Alignment:
Q  188 tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||| |||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  4048490 tcttttaggtttaagatttgtaacagattgatcatttaagttattttggttacacataagtcct 4048427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 4048204 - 4048262
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||||||||||||||||||||||| | || |||||||||||||| || ||||||||||    
T  4048204 ttttaagtttgaggtttgtaatagactaattctttaagttattttggtcacacataagt 4048262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 6222083 - 6222141
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||| |||||||||||| |||| || |||||||||||||||| |||||||||||    
T  6222083 tttaagtttaaggtttgtaatatattggtcttttaagttattttagtcacacataagtc 6222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 27280948 - 27280886
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||| |||||||||||||||||||| || |||| ||||||||||||||| || ||||||||||    
T  27280948 ggtcctttaagtttgaggtttgtaacagcttgaccctttaagttattttggtcacacataagt 27280886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 27576665 - 27576607
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||| |||||||| |||||| |||||||||||||||| || |||||||||||    
T  27576665 tttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtc 27576607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 29710318 - 29710383
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||| |||||||| ||||| ||||||||||||||||| || ||| |||||||||    
T  29710318 ggtcctttaagtttgacgtttgtaacagattaatcctttaagttattttggtcacatataagtcct 29710383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 30869734 - 30869677
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| || | ||||||||    
T  30869734 tttaagtttgaggtttgtaattgattggtcctttaagttattttggtcatacataagt 30869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 27280883 - 27280823
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||  ||| | ||||||||||||||||||||| || |||||||||||||    
T  27280883 tttaagtttgaggttcataacaaattgatcctttaagttattttggtaacacataagtcct 27280823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 30869412 - 30869472
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||| ||||| ||| | |||||||||| |||||||| |||||||    
T  30869412 tttaagtttgaggtttgtaatcgattggtccctaaagttattttggttacacacaagtcct 30869472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 30869674 - 30869631
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||| |||||| ||||||||||||||||    
T  30869674 tttaagtttgaggtttgtaacagattggtcctttaagttatttt 30869631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 29710594 - 29710536
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||| |||||||  ||||| |||||||||||||||| || |||||||||||    
T  29710594 tttaagtttgagatttgtaacggattggtcctttaagttattttcgtcacacataagtc 29710536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 30662218 - 30662276
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||| ||| ||| ||||||||| ||||| |||||||| |||||||||||||    
T  30662218 tttaagtttgagatttataacagattgatcatttaaattattttaattacacataagtc 30662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 37307913 - 37307871
Alignment:
Q  14 gaacaatgcataatttatgcaagatccgaggttcaaatcccga 56  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  37307913 gaacaatgcataatatatgcaagatccgatgttcaaatcccga 37307871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 43258314 - 43258364
Alignment:
Q  198 ttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||| |||||||||||||||||| ||||||||||||| || ||||||||||    
T  43258314 ttgaagtttgtaatagattgatcatttaagttatttttgtcacacataagt 43258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 11975780 - 11975715
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||| |||| || |||||| |||||||||||||||| || ||| |||||||||    
T  11975780 ggtcctttaagtttgagatttgaaacagattggtcctttaagttatttttgtaacagataagtcct 11975715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 31453121 - 31453056
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| |||||  |  ||||||||||||| || |||||||||||||    
T  31453121 ggtcctttaagtttgaggtttgtaacagattagttatttaagttatttttgtcacacataagtcct 31453056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 6694534 - 6694594
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||| |||| || |||||||||||||  |  ||||||||||||    
T  6694534 tttaagtttgaggtttgtaataaattggtcttttaagttattttgttcccacataagtcct 6694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 41666147 - 41666207
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| ||| | ||||||| ||||||||||||| |||| | |||||||||    
T  41666147 tttaagtttgaggtttataacaaattgatcatttaagttatttttgttatatataagtcct 41666207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 42312822 - 42312882
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| |||||||||||||| || ||||  ||||||| || |||||||||||||    
T  42312822 tttaagtttgagatttgtaatagattggtcatttagtttatttttgtcacacataagtcct 42312882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 27280612 - 27280675
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||| ||||||||||| |||||| | | |||| ||||||||||||||||||  |||||||||||    
T  27280612 ggtcctttaagtttgaagtttgttacaaattggtcctttaagttattttagccacacataagtc 27280675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 40951635 - 40951678
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||| |||||| |||||||||| |||||||||||||    
T  40951635 tttaagtttgagatttgtagtagattgatcatttaagttatttt 40951678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 29710654 - 29710596
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||| |||||||| |||||| || |||| |||||||| || |||||||||||    
T  29710654 tttaagtttgacgtttgtaacagattggtcttttaggttattttggtaacacataagtc 29710596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 3198219 - 3198256
Alignment:
Q  194 aagtttgaggtttgtaatagattgatcctttaagttat 231  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  3198219 aagtttgaagtttgtaacagattgatcctttaagttat 3198256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 3198274 - 3198331
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||| | |||| || ||||||||||||| ||  |||||||||    
T  3198274 tttaagtttgaggtttgtaacaaattggtcttttaagttattttggtcccacataagt 3198331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 41666207 - 41666264
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||| | ||||||  ||| || |||||| |||||||||||||    
T  41666207 tttaagtttgaggtttgtaacatattgatttttttagctattttggttacacataagt 41666264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 41666423 - 41666358
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| |||||  ||| |||||||||||   | |||||||||||||    
T  41666423 ggtcctttaagtttgaggtttgtaacagatttgtcccttaagttatttcgatcacacataagtcct 41666358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 42313126 - 42313065
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatccttt-aagttattttagttacacataagtcct 251  Q
    ||||||||||| |||||||| ||  ||||||||| |||||||||| || |||||||||||||    
T  42313126 tttaagtttgacgtttgtaacaggctgatccttttaagttattttggtcacacataagtcct 42313065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 27280677 - 27280737
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||| |||| ||||| |||  |||||||||||| || |||| ||||||||    
T  27280677 tttaagtttgaggttcgtaagagattaatcacttaagttattttggtaacacgtaagtcct 27280737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 27576605 - 27576545
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||  |||||||  ||||| ||||||| |||||||| || |||||||||||||    
T  27576605 tttaagtttgatatttgtaactgattggtcctttaggttattttggtcacacataagtcct 27576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 46713273 - 46713333
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||| |||||||||| |||  || ||||| |||||||| | |||||||||||||    
T  46713273 tttaagtttgaagtttgtaataaattagtcatttaaattattttaataacacataagtcct 46713333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 12498954 - 12498894
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||    
T  12498954 tttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcct 12498894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 53863673 - 53863593
Alignment:
Q  172 ttaaattacatcatg-gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||| ||| ||||||||| | ||||||||||||||| || |||||||||||||||| |||||||||||||    
T  53863673 ttaaattacatcatgagtcctttaagtttcaagtttgtaatagattggtcgtttaagttattttagtcacacataagtcct 53863593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 50290476 - 50290415
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||    
T  50290476 gtcttttaagtttgaggtttgtaataaattgatcatttaagttattttggtcacacataagt 50290415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 24369338 - 24369278
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||    
T  24369338 tttaagtttgaggtttgtaatagatttgtcctttaagttattttagtcacacctaagtcct 24369278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 45038450 - 45038390
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||| |||||||||||||||| || |||||||||||||    
T  45038450 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcct 45038390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 25055865 - 25055944
Alignment:
Q  172 ttaaattacatcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||| | ||  |||||||||||||||||||||||||||  |||||||||||||||| || |||||||| ||||    
T  25055865 ttaaattacattacggatttttaagtttgaggtttgtaatagatttgtcctttaagttattttggtgacacataaatcct 25055944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 2469902 - 2469962
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || |||| ||||||||    
T  2469902 tttaagtttgaggtttgtaatagattggttctttaagttattttggtcacacctaagtcct 2469962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 45038510 - 45038450
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||||||||| || ||||||||||||| || ||| |||||||||    
T  45038510 tttaagtttgaggtttgtaatagattggtcatttaagttatttttgtcacaaataagtcct 45038450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 53863380 - 53863440
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||| ||| ||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  53863380 tttaagttcgagatttgtaacagattggtcctttaagttattttagtcacacataagtcct 53863440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 40146952 - 40147015
Alignment:
Q  188 tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||| |||||||  || ||||||||||||| || |||||||||||||    
T  40146952 tcttttaagtttgaggtttgtgatagatttgtcatttaagttattttggtcacacataagtcct 40147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 2470182 - 2470124
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||| |||||||||||||||| |||| |||||||||||||||| || |||||||||||    
T  2470182 tttaaatttgaggtttgtaatatattggtcctttaagttattttggtcacacataagtc 2470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 2470247 - 2470182
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||| ||||| ||||||||||||||||| |||||||||||||||| || ||| |||||||||    
T  2470247 ggtcctttcagtttaaggtttgtaatagattggtcctttaagttattttggtcacatataagtcct 2470182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 7245990 - 7246055
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||| |||||||| || |||||||||||||||||||| || | |||||||||||    
T  7245990 ggtcctttaagtttgacgtttgtaacaggttgatcctttaagttattttggtcagacataagtcct 7246055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 41083052 - 41083117
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| | ||||||| ||||||||||||| || ||| |||||||||    
T  41083052 ggtcctttaagtttgaggtttgtaacatattgatcatttaagttatttttgtcacatataagtcct 41083117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 12498679 - 12498743
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||| ||||||| |||| ||||||| ||||||||||||| || |||||||| ||||    
T  12498679 gtcttttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcct 12498743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 41083393 - 41083345
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  41083393 ggtcctttaagtttgaggtttgtaacagattggtcctttaagttatttt 41083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 9999565 - 9999506
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||||||||| |||||| || ||||||||||||| || ||| |||||||    
T  9999565 ttttaagtttgaggtttgtaacagattggtcatttaagttatttttgtcacatataagtc 9999506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 21322044 - 21321993
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacac 242  Q
    |||||||||||||||||||| |||||| |||||||| ||||||| |||||||    
T  21322044 tttaagtttgaggtttgtaaaagattggtcctttaacttattttggttacac 21321993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 26782572 - 26782509
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||| |||||||||||||||||||||| ||||||  ||||||||||||| || ||| |||||||    
T  26782572 ggtcctttaagtttgaggtttgtaatatattgattttttaagttatttttgtcacatataagtc 26782509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 45038192 - 45038235
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  45038192 tttaagtttgaggtttgtaatatattgatcttttaagttatttt 45038235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 45787091 - 45787142
Alignment:
Q  196 gtttgaggtttgtaatagattgatcctttaagttattttagttacacataag 247  Q
    ||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||    
T  45787091 gtttgaggtttgtaacagattgatcatttaacttattttggttacacataag 45787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 12498623 - 12498681
Alignment:
Q  192 ttaagtttgaggtttgtaatagattgatcc-tttaagttattttagttacacataagtc 249  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||| || |||||||||||    
T  12498623 ttaaatttgaggtttgtaatagattggtccttttaagttatttttgtcacacataagtc 12498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 12592464 - 12592406
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||| |||||||||||||||||| |||||||||| || || | |||||||||    
T  12592464 tttaagtttgaagtttgtaatagattgatcttttaagttatattggtcatacataagtc 12592406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 44057337 - 44057279
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||| ||||||||| |||| || |||||||||||||||| | |||||||||    
T  44057337 tttaagtttgagatttgtaataaattggtcatttaagttattttagtcatacataagtc 44057279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 45787365 - 45787311
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacata 245  Q
    |||||||||||||||||||||| ||||||  ||||||||||||| || |||||||    
T  45787365 tttaagtttgaggtttgtaataaattgattttttaagttattttggtcacacata 45787311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 19156633 - 19156568
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||  |||||||| ||||| ||||||||||||||||| || ||| || ||||||    
T  19156633 ggtcttttaagtttggtgtttgtaacagattcatcctttaagttatttttgtaacatatcagtcct 19156568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 24684320 - 24684262
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||| |  |||||||||||| ||| |||||||||||||    
T  24684320 tttaagtttgaggtttgtaacagattggt--tttaagttatttcagtcacacataagtcct 24684262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 36490592 - 36490633
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  36490592 acaatgcataatgtatgcaagatccggggttcaaatcccgac 36490633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 40147018 - 40147074
Alignment:
Q  194 aagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||||||||| ||| |||||||| || |||||| ||||||    
T  40147018 aagtttgaggtttgtaatagattgatcc-ttaggttattttggtcacacatgagtcct 40147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 2788228 - 2788168
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| | ||||||  ||||||||||||| || |||||||| ||||    
T  2788228 tttaagtttgaggtttgtaacaaattgatattttaagttattttggtcacacataaatcct 2788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 7246055 - 7246115
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||  ||||||| | |||| || ||||||||||||| ||||||||||||||||    
T  7246055 tttaagtttgatatttgtaacaaattggtcgtttaagttattttggttacacataagtcct 7246115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 7246358 - 7246298
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| | |||| || ||||||||||||| || | |||||||||||    
T  7246358 tttaagtttgaggtttgtaacatattggtcttttaagttattttggtcatacataagtcct 7246298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 24684055 - 24684115
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| ||||||||||||  ||||||||||||| || ||| |||| ||||    
T  24684055 tttaagtttgaggtttataatagattgatgttttaagttatttttgtcacatataaatcct 24684115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 40147236 - 40147176
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| | ||||| |||||||||||||||  | ||| |||||||||    
T  40147236 tttaagtttgaggtttgtaacaaattgaccctttaagttatttttctcacatataagtcct 40147176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 41083117 - 41083177
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||| |||||||| | |||| ||||||||||||||||  | |||||||||||||    
T  41083117 tttaagtttgaagtttgtaacatattggtcctttaagttattttgatcacacataagtcct 41083177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 41083328 - 41083268
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||| |||| |||||| || ||||||||||||  || |||||||||||||    
T  41083328 tttaagtttgaggttcgtaacagattggtcttttaagttatttcggtcacacataagtcct 41083268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 55617704 - 55617628
Alignment:
Q  172 ttaaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataag 247  Q
    ||||||||||||| || || ||||| ||||||||||||||||||||  | |||||||||||||| || |||| ||||    
T  55617704 ttaaattacatcagggatcctttaaatttgaggtttgtaatagattagttctttaagttattttggtaacacgtaag 55617628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 55625008 - 55624932
Alignment:
Q  172 ttaaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataag 247  Q
    ||||||||||||| || || ||||| ||||||||||||||||||||  | |||||||||||||| || |||| ||||    
T  55625008 ttaaattacatcagggatcctttaaatttgaggtttgtaatagattagttctttaagttattttggtaacacgtaag 55624932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 2787869 - 2787948
Alignment:
Q  172 ttaaattacatca-tggtcttttaagtttgaggtttgtaatagattgatcctt-taagttattttagttacacataagtc 249  Q
    |||||||| |||| |||| |||||||||||| ||||||||||||| | || || ||||||||||| ||| ||||||||||    
T  2787869 ttaaattatatcactggttttttaagtttgatgtttgtaatagatcggtctttataagttattttggttgcacataagtc 2787948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 21322123 - 21322044
Alignment:
Q  173 taaattacatcatg-gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| |||| ||| |||||||||||||||||||| | |||  || ||||||||||||| || ||| |||||||||    
T  21322123 taaattacaccatgagtcctttaagtttgaggtttgtaacacatttttcttttaagttattttggtcacatataagtcct 21322044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 24684384 - 24684337
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattt 233  Q
    |||| |||||||||||||||| |||||||||| || ||||||||||||    
T  24684384 ggtcctttaagtttgaggtttataatagattggtcttttaagttattt 24684337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 25056234 - 25056187
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||||||| | |||| || |||||||||||||    
T  25056234 gtcttttaagtttgaggtttgtaacaaattggtcttttaagttatttt 25056187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 46196110 - 46196173
Alignment:
Q  188 tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| | |||||||||||||   |||||||||||||||| || ||| |||||||||    
T  46196110 tcttttaagtttcacgtttgtaatagatatgtcctttaagttattttggtcacaaataagtcct 46196173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 11884613 - 11884679
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatccttt-aagttattttagttacacataagtcct 251  Q
    |||| ||||| |||||||||||||| | ||| ||||||| |||||||||| || |||||||||||||    
T  11884613 ggtcctttaaatttgaggtttgtaacaaattaatccttttaagttatttttgtcacacataagtcct 11884679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 11884679 - 11884725
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagt 237  Q
    |||||||||||||||||||| |||||| ||||| || ||||||||||    
T  11884679 tttaagtttgaggtttgtaacagattggtccttcaatttattttagt 11884725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 40395367 - 40395313
Alignment:
Q  197 tttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||| |||||  |||||||||||||||  || |||||||||||||    
T  40395367 tttgaggtttgtaacagattagtcctttaagttatttctgtcacacataagtcct 40395313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 53863594 - 53863532
Alignment:
Q  189 cttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||| |||||| | |||| |||||||||||||||| || |  ||||||||||    
T  53863594 cttttaagtttgagggttgtaacaaattggtcctttaagttattttggtcatgcataagtcct 53863532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 9999622 - 9999569
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacat 244  Q
    |||||||| || ||||||||||||||| || ||||||||||||| || ||||||    
T  9999622 tttaagttagaagtttgtaatagattggtcatttaagttattttggtcacacat 9999569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 12592529 - 12592464
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||| ||||| ||||||  ||||| |||||||||| ||| || ||||||    
T  12592529 ggtcgtttaagtttgaggtttataataaattgattttttaatttattttagtcacatattagtcct 12592464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 12917656 - 12917693
Alignment:
Q  13 tgaacaatgcataatttatgcaagatccgaggttcaaa 50  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  12917656 tgaacaatgcataatgtatgcaaaatccgaggttcaaa 12917693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 19479518 - 19479473
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||||||| |||||||| |||| |||||||| ||||||    
T  19479518 atgaacaatgcataatatatgcaaggtccggggttcaaaccccgac 19479473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 40071009 - 40070964
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||||||| |||||||| ||||| ||||||| ||||||    
T  40071009 atgaacaatgcataatatatgcaaggtccgaagttcaaaccccgac 40070964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 40395097 - 40395162
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||| ||||| | |||||| ||||||| |||||||| || ||| |||||||||    
T  40395097 ggtcctttaagtttgagatttgttacagattggtcctttaggttatttttgtcacatataagtcct 40395162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 46196392 - 46196347
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttag 236  Q
    |||||||||||||||||||| ||||||  || ||||||||||||||    
T  46196392 tttaagtttgaggtttgtaacagattggaccattaagttattttag 46196347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 51950813 - 51950755
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||| ||||||||||||||| |||||  | ||||||| ||||||| ||||||||    
T  51950813 tttaagtttgaagtttgtaatagattggtcctt--aattattttggttacacttaagtcct 51950755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 55617625 - 55617568
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||||||||||||||| || | |||  || |||||||||||||||| ||||||||||    
T  55617625 tttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataagt 55617568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 55624929 - 55624872
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||||||||||||||| || | |||  || |||||||||||||||| ||||||||||    
T  55624929 tttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataagt 55624872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 2788168 - 2788108
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| |||||||||| | ||||||||||||||| ||||| || | | |||||||||    
T  2788168 tttaagtttaaggtttgtaaaaaattgatcctttaagtcattttggtcagagataagtcct 2788108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 9999272 - 9999352
Alignment:
Q  172 ttaaattacatcat-ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||  |||| ||||||| |||||||||||| ||||| |||||||| ||| || |  | |||||||||||||    
T  9999272 ttaaattacatcagcggtcctttaagtctgaggtttgtaacagatttatcctttaggttgttctgatcacacataagtcct 9999352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 12697145 - 12697185
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttat 231  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  12697145 tttaagtttgatgtttgtattagattgatcatttaagttat 12697185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 14984123 - 14984063
Alignment:
Q  174 aaattacatcat-ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattt 233  Q
    |||||||||||  |||| ||||||||||| |||||||| | |||| |||||||||||||||    
T  14984123 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcctttaagttattt 14984063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 51950545 - 51950593
Alignment:
Q  203 gtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||  ||||||||| ||||||||||||| || |||||||||||||    
T  51950545 gtttgtagcagattgatcttttaagttattttggtcacacataagtcct 51950593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 31630128 - 31630186
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||    
T  31630128 tttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacacataagtc 31630186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 25895190 - 25895130
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  25895190 tttaagtttaaggtttgtaacagattgaacctttaagttattttagtcacacataagtcct 25895130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 1316020 - 1316098
Alignment:
Q  173 taaattacatcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| || | || ||||| ||||||||||||||||||| |||| ||||||||||||| || |||||||||||||    
T  1316020 taaattacaccaggatcctttaaatttgaggtttgtaatagatagatcgtttaagttattttggtcacacataagtcct 1316098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 14166540 - 14166463
Alignment:
Q  173 taaattacatcatg-gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||| | ||| ||||||||||| ||||||||||||| | |||||||||||||||| || |||||||||||    
T  14166540 taaattacatcaggtgtcatttaagtttgatgtttgtaatagataggtcctttaagttatttttgtcacacataagtc 14166463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 3877012 - 3876952
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||| || |||||||||||||    
T  3877012 tttaaatttgaggtttgtaataaattgatcttttaagttattttggtcacacataagtcct 3876952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 25895250 - 25895190
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||| |||||||||||||||| || ||||| |||||||    
T  25895250 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacaaaagtcct 25895190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 44556588 - 44556648
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||| ||||||||||||| |||||||  | |||||||||||||    
T  44556588 tttaagtttgaggtttgtaataaattgatcctttaacttattttgatcacacataagtcct 44556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 5009447 - 5009392
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    |||||||||||||||||||| | ||||||||||||||||||||| || ||||||||    
T  5009447 tttaagtttgaggtttgtaacatattgatcctttaagttatttttgtcacacataa 5009392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 9500969 - 9501028
Alignment:
Q  192 ttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||    
T  9500969 ttaagtttgaggtttgtaacagatcgcttctttaagttattttagtcacacataagtcct 9501028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 43699518 - 43699455
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||| |||||||||||||||||||| | ||||||||||||| ||||||| || |||||||||||    
T  43699518 ggtcctttaagtttgaggtttgtaacatattgatcctttaatttattttggtcacacataagtc 43699455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 36217221 - 36217160
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||| || |||||||||||    
T  36217221 gtcttttaagtttgaggtttgtaacagattgat-ctttaaattattttggtcacacataagtc 36217160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 39442562 - 39442508
Alignment:
Q  192 ttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    |||||||| |||||||||| |||||||||||||||||||| || |||||||||||    
T  39442562 ttaagttttaggtttgtaaaagattgatcctttaagttatgtttgttacacataa 39442508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 11791898 - 11791813
Alignment:
Q  167 atagtttaaattacatc-atggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||| | | |||||||||||||| |||||||||||||   || ||||||||||||| || |||||||||||||    
T  11791898 ataggttaaattacatcgacgatcttttaagtttgaagtttgtaatagatatgtcatttaagttattttggtcacacataagtcct 11791813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 33847772 - 33847707
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||| |||||||| | |||| |||||||||||||||| || |||||||||||||    
T  33847772 ggtcctttaagtttgatgtttgtaacatattgttcctttaagttattttggtcacacataagtcct 33847707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 44556523 - 44556588
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||| ||||||||||||||||| || |||||||| |||| || |||||||||||||    
T  44556523 ggtcctttaagtttaaggtttgtaatagattggtcatttaagttttttttgtcacacataagtcct 44556588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 36694588 - 36694528
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| |||||||||||||| |||||| |||||||| ||||||| || |||||||||||||    
T  36694588 tttaattttgaggtttgtaacagattggtcctttaaattattttggtcacacataagtcct 36694528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 4189091 - 4189044
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||    
T  4189091 gtcttttaagtttgaggtttgtaatatataggtcctttaagttatttt 4189044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 4511682 - 4511627
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    ||||||||||| |||||||| |||||||| |||||||||||||| |||| ||||||    
T  4511682 tttaagtttgaagtttgtaacagattgattctttaagttattttggttagacataa 4511627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 5009161 - 5009220
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcc-tttaagttattttagttacacataagtc 249  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||  | |||||||||||    
T  5009161 tttaagtttgaggtttgtaatagattggtccttttaagttattttgttcacacataagtc 5009220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 4511396 - 4511450
Alignment:
Q  195 agtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||||||||||| || |||||||||| || |||||||| |||||    
T  4511396 agtttgaggtttgtaatagattggtcatttaagttatattggttacacacaagtc 4511450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 9500903 - 9500967
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcc 250  Q
    |||| ||||||||| |||| ||||| |||||| |||||||||||||||| || |||| |||||||    
T  9500903 ggtcctttaagttttaggtctgtaacagattggtcctttaagttattttggtcacacttaagtcc 9500967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 31630408 - 31630348
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| ||  ||||||||| ||||||||||||| || ||||| |||||||    
T  31630408 tttaagtttgaggtttatagaagattgatcatttaagttattttggtcacacaaaagtcct 31630348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 29380027 - 29379984
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||||| |||| || |||||||||||||    
T  29380027 tttaagtttgaggtttgtaataaattggtcatttaagttatttt 29379984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 36217275 - 36217219
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||| | ||||||  ||||||||||||| || |||||||||||    
T  36217275 tttaagtttgaggtttgtaacaaattgat--tttaagttattttggtcacacataagtc 36217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 40295499 - 40295456
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatcccg 55  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||    
T  40295499 atgaacaatgcataatgtatgcaagattcgaggttcaaaccccg 40295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 5009523 - 5009450
Alignment:
Q  175 aattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||||||||||| || |||||||||||||||||||| | |||| || |||||||| |||| || ||||||||||    
T  5009523 aattacatcatgggtcctttaagtttgaggtttgtaacatattggtcttttaagtt-tttttgtcacacataagt 5009450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 12612449 - 12612507
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||| ||||||||||||||||| || ||||| |||||||  | |||||||||||    
T  12612449 tttaagtttaaggtttgtaatagattggtcttttaaattattttgatcacacataagtc 12612507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 25894963 - 25895028
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||| ||||||| | |||| |||||||||||||||| ||  || |||||||||    
T  25894963 ggtcctttaagtttgagatttgtaacaaattggtcctttaagttattttggtcgcatataagtcct 25895028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 12001895 - 12001835
Alignment:
Q  173 taaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttatt 232  Q
    ||||||||||||||| || ||||||||| |||||||||| | ||| || ||||||||||||    
T  12001895 taaattacatcatgggtcatttaagtttcaggtttgtaacaaattaattctttaagttatt 12001835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 30265378 - 30265426
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||| |||||||||||||||||||||| |||| ||| |||| |||||||    
T  30265378 ggtcctttaagtttgaggtttgtaataaattggtccattaaattatttt 30265426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 9982648 - 9982733
Alignment:
Q  167 atagtttaaattacatcat-ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||| |||||||  | |||||||||||||    
T  9982648 ataggttaaattacatcataggtcttttaagtttgaggtttgtaacatattcatcctttaaattattttgatcacacataagtcct 9982733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 21598429 - 21598508
Alignment:
Q  173 taaattaca-tcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| ||| |||| |||||||||||||||| ||| |||||| |||||||||||||||| ||| ||||||||||||    
T  21598429 taaattacactcagggtcctttaagtttgaggtttataacagattggtcctttaagttattttggttgcacataagtcct 21598508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 9983009 - 9982944
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||||| |||||| | ||||||||||||||||||||| || |||||||||||||    
T  9983009 ggtcctttaagtttgaggattgtaacaaattgatcctttaagttattttggtcacacataagtcct 9982944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 35050915 - 35050855
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||| ||||||||||||||||||||  || || ||||||||||    
T  35050915 tttaagtttgaggtttgtaataaattgatcctttaagttatttaggtcacgcataagtcct 35050855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 21598799 - 21598720
Alignment:
Q  173 taaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| || || |||||||||||||||||||| |||||| ||||||||||||||||  |  ||||||||||||    
T  21598799 taaattacatcaggggtcctttaagtttgaggtttgtaacagattggtcctttaagttattttgttctcacataagtcct 21598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 17136907 - 17136965
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||    
T  17136907 tttaagtttgaggtttgtaacagattaattctttaagttattttggtcacacataagtc 17136965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 10356601 - 10356536
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||| |||||||| |||||| ||||||| |||||||| || |||||||||||||    
T  10356601 ggtcctttaagtttgacgtttgtaacagattggtcctttaggttattttggtaacacataagtcct 10356536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 17342719 - 17342655
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||||||| |  ||| |||||||||||||||  || |||||||||||||    
T  17342719 gtcttttaagtttgaggtttgtaacatgttggtcctttaagttatttcggtcacacataagtcct 17342655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 21598508 - 21598568
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||| ||||||||||||||||  |  ||||||||||||    
T  21598508 tttaagtttgaggtttgtaacagattggtcctttaagttattttgatcccacataagtcct 21598568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 21598720 - 21598660
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||| ||||||||| | |||| |||||||||||||||| || |||||||||||||    
T  21598720 tttaagtttgtggtttgtaacatattggtcctttaagttattttggtcacacataagtcct 21598660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 24059728 - 24059788
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| ||| ||||||||| ||||| ||||||| || |||||||||||||    
T  24059728 tttaagtttgaggtttataacagattgatcatttaaattattttggtcacacataagtcct 24059788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 17136842 - 17136905
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||| ||||| ||||||||||||||||||||  |||||||||||||||| ||  ||||||||||    
T  17136842 ggtcctttaaatttgaggtttgtaatagattagtcctttaagttattttggtctcacataagtc 17136905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 8809329 - 8809371
Alignment:
Q  15 aacaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  8809329 aacaatgcataatatatgcaagatccgaggttcaaaccccgac 8809371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 9982733 - 9982791
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||| ||  ||||||||||    
T  9982733 tttaagtttgagttttgtaacagattgatcctttgagttattttggtcgcacataagtc 9982791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 10356259 - 10356324
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| | |||  |||||||| ||||||| || |||||||||||||    
T  10356259 ggtcctttaagtttgaggtttgtaacaaattagtcctttaaattattttggtcacacataagtcct 10356324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 35225396 - 35225461
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| | |||| |||||||||||||||| || | |||||| ||||    
T  35225396 ggtcctttaagtttgaggtttgtaacaaattggtcctttaagttattttggtcatacataaatcct 35225461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 3895825 - 3895777
Alignment:
Q  184 atggtcttttaagtttgaggtttgtaatagattgatcctttaagttatt 232  Q
    |||||| |||||||||||||||||||||||||| ||  |||||||||||    
T  3895825 atggtcctttaagtttgaggtttgtaatagattaattttttaagttatt 3895777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 10356536 - 10356476
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||||||| |||||| || ||||||||||||| |  |||||||||||||    
T  10356536 tttaagtttgagatttgtaacagattggtcttttaagttatttttgccacacataagtcct 10356476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 364271 - 364214
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||| |||||  ||||||||||||||||| ||||||||||||| || |||||||||||    
T  364271 tttaaatttgatatttgtaatagattgatc-tttaagttattttggtcacacataagtc 364214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 6140505 - 6140447
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||||||||||  ||||||||||||||| | ||||||||| ||| || ||||||||||    
T  6140505 ttttaagtttgaaatttgtaatagattgaccatttaagttagtttggtcacacataagt 6140447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 17137088 - 17137030
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||| ||| ||||||||||||||| || ||||||||||| |||| |||||| ||||    
T  17137088 tttaagtgtgaagtttgtaatagattggtcatttaagttattctagtcacacattagtc 17137030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 17342775 - 17342717
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||||||| |  ||| |||||||||||||||| || | |||||||||    
T  17342775 tttaagtttgaggtttgtaacatgttggtcctttaagttattttggtaatacataagtc 17342717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 35050800 - 35050758
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattt 233  Q
    ||||||||| |||||||||| |||||| |||||||||||||||    
T  35050800 tttaagtttaaggtttgtaacagattggtcctttaagttattt 35050758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 15187087 - 15187128
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||| |||||||| ||||||||||||| ||||||    
T  15187087 acaatgcataatatatgcaaggtccgaggttcaaaccccgac 15187128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 15473519 - 15473478
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||| |||||||| ||||||||||||| ||||||    
T  15473519 acaatgcataatatatgcaaggtccgaggttcaaaccccgac 15473478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 16204827 - 16204786
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||| |||||||| |||| |||||||||||||||    
T  16204827 acaatgcataatgtatgcaaggtccggggttcaaatcccgac 16204786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 17137172 - 17137091
Alignment:
Q  167 atagtttaaattacatcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||| ||||||||||||||||  ||||| ||||  |||||||| ||||||| || ||||| ||||||| || || |||||||    
T  17137172 ataggttaaattacatcatgggtttttacgtttacggtttgtattagattggtcatttaaattattttggtcactcataagt 17137091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 19557917 - 19557872
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttatt 232  Q
    |||||||||||||||||||| ||| |||| | ||||||||||||||    
T  19557917 gtcttttaagtttgaggtttataacagatcggtcctttaagttatt 19557872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 35225461 - 35225502
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatt 232  Q
    ||||||||| |||||||||| |||||| ||||||||||||||    
T  35225461 tttaagtttaaggtttgtaacagattggtcctttaagttatt 35225502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 10356324 - 10356384
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||  ||||||| |||||| | |||||||||||||| || |||| ||||||||    
T  10356324 tttaagtttgatatttgtaacagattggttctttaagttattttggtcacacttaagtcct 10356384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 12215773 - 12215813
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatc 52  Q
    |||||||||||||||| |||||||| |||| ||||||||||    
T  12215773 atgaacaatgcataatatatgcaaggtccggggttcaaatc 12215813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 16125067 - 16125027
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatc 52  Q
    |||||||||||||||| |||||||  |||||||||||||||    
T  16125067 atgaacaatgcataatatatgcaaagtccgaggttcaaatc 16125027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 32192643 - 32192687
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatcccga 56  Q
    |||||| ||| ||||| |||||||||| |||||||||||||||||    
T  32192643 atgaacgatgtataatgtatgcaagattcgaggttcaaatcccga 32192687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 32193898 - 32193858
Alignment:
Q  14 gaacaatgcataatttatgcaagatccgaggttcaaatccc 54  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  32193898 gaacaatgcataatatatgcaaggtacgaggttcaaatccc 32193858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 15564139 - 15564055
Alignment:
Q  167 atagtttaaattacatcatggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||||| | |  ||||| ||||| |||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  15564139 ataggttaaattacatcacgatactttaaatttgaagtttgtaatagattgatcttctaagttatttttgttacacataagtcct 15564055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 27052728 - 27052668
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||    
T  27052728 tttaagtttgaggtttgtaatagattgattctttaagttatttttgtcgcacataagtcct 27052668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 20209538 - 20209477
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| || ||| ||||||    
T  20209538 gtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagt 20209477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 20229246 - 20229185
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| || ||| ||||||    
T  20229246 gtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagt 20229185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 36053121 - 36053064
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||| |||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  36053121 tttaaatttgaggtttgtaaaatattgatcctttaagttattttagtcacacataagt 36053064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 41151741 - 41151681
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||  |||||||||||||||| || |||||||||||||    
T  41151741 tttaagtttgaggtttgtaacagattagtcctttaagttattttggtcacacataagtcct 41151681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 27052406 - 27052469
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||| ||||||||||| ||||||||||||||| ||| ||||||||||||||| ||| |||||||    
T  27052406 ggtcctttaagtttgatgtttgtaatagattggtcccttaagttattttagtcacatataagtc 27052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 9400164 - 9400106
Alignment:
Q  188 tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||| || ||||||||    
T  9400164 tcttttaagtttgaggtttgtaacatattgatcgtttaagttattttggtcacacataa 9400106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 24827420 - 24827478
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||| ||||||||||||||  || |||||||||||||||| |||||||||||    
T  24827420 tttaagtttgatgtttgtaatagatttgtcatttaagttattttagtcacacataagtc 24827478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 24793024 - 24793081
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||| |||||||||||||    
T  24793024 tttaagtttgcggtttataatagatagatcctttaaattattttggttacacataagt 24793081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 27127937 - 27127997
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||| || |||||||||||||    
T  27127937 ttttaagtttgag-tttgtaacagattgattctttaagttattttggtcacacataagtcct 27127997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 41151383 - 41151468
Alignment:
Q  167 atagtttaaattacatcat-ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||| ||| |||| |||||||||||| ||||||| | |||| ||||||||||||||||  | |||||||||||||    
T  41151383 ataggttaaattacaccataggtcctttaagtttgagttttgtaacatattggtcctttaagttattttgatcacacataagtcct 41151468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 41151468 - 41151528
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| || |||| |||||| |||||||||||||||| || |||||||||||||    
T  41151468 tttaagtttgagtttagtaacagattggtcctttaagttattttggtcacacataagtcct 41151528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 27855560 - 27855603
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||    
T  27855560 tttaagtttaaggtttgtaatagattggtcctttaagttatttt 27855603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 24827342 - 24827400
Alignment:
Q  174 aaattacatcat-ggtcttttaagtttgaggtttgtaatagattgatcctttaagttat 231  Q
    |||||||||||| |||| |||||||||||||||||||| |||||| || ||||||||||    
T  24827342 aaattacatcataggtcctttaagtttgaggtttgtaacagattggtcatttaagttat 24827400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 41151682 - 41151620
Alignment:
Q  189 cttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||| | ||||||||| |||||| ||||||||||| |||| || |||||||||||||    
T  41151682 cttttaagttcgtggtttgtaacagattggtcctttaagttcttttggtcacacataagtcct 41151620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 6220181 - 6220246
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||||||||| || | |||| |||||||||||||||| || ||| |||||||||    
T  6220181 ggtcctttaagtttgaggtttgaaacaaattggtcctttaagttatttttgtaacagataagtcct 6220246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 6220517 - 6220460
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||| | |||| | |||||||||||||| || ||||||||||    
T  6220517 tttaagtttgaggtttgtaacaaattggttctttaagttatttttgtcacacataagt 6220460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 15563829 - 15563905
Alignment:
Q  173 taaattacatcatgg-tcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||| ||||||| |||||||| ||| |||||||||| ||||| ||  |||||||||||||||| |||||||||||    
T  15563829 taaattatatcatgggtcttttaaatttaaggtttgtaacagattaatt-tttaagttattttagtcacacataagtc 15563905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 24909743 - 24909678
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||| ||||||| | |||| ||||||||||||||||  | |||||||||||||    
T  24909743 ggtcctttaagtttgagatttgtaacaaattggtcctttaagttattttgatcacacataagtcct 24909678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 6220457 - 6220397
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||| ||||||| |||||| | |||||||||||| | || |||||||||||||    
T  6220457 tttaagtttgagatttgtaacagattggtactttaagttattgtggtcacacataagtcct 6220397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 9399879 - 9399935
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataag 247  Q
    ||||||||| |||||||||||||| |||  |||||||||||||| || |||||||||    
T  9399879 tttaagtttaaggtttgtaatagagtgactctttaagttattttggtcacacataag 9399935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 24909678 - 24909618
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||  |||||| |||||||| ||||||| || || ||||||||||    
T  24909678 tttaagtttgaggtttgtagcagattggtcctttaaattattttggtcacgcataagtcct 24909618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 27052471 - 27052531
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| |||||||||| | |||| |||||||||||||||  || |||||||||||||    
T  27052471 tttaagtttaaggtttgtaacacattggtcctttaagttatttcggtcacacataagtcct 27052531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 4263837 - 4263876
Alignment:
Q  14 gaacaatgcataatttatgcaagatccgaggttcaaatcc 53  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  4263837 gaacaatgcataatgtatgcaaggtccgaggttcaaatcc 4263876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 14549963 - 14550018
Alignment:
Q  193 taagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    |||||||||||||||||||| |||| | ||||| |||||||| || ||||||||||    
T  14549963 taagtttgaggtttgtaatatattggttctttatgttattttggtcacacataagt 14550018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 16915223 - 16915266
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttattt 233  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||    
T  16915223 ttttaagtttgagatttgtaacagattgatcatttaagttattt 16915266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 27052668 - 27052625
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||    
T  27052668 tttaagtttgaggtttataacagattggtcctttaagttatttt 27052625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 6220246 - 6220304
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||||||||||||  ||||| || ||||||| ||||| || |||||||||||    
T  6220246 tttaagtttgaggtttgtaactgattggtcatttaagtaatttttgtcacacataagtc 6220304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 9067108 - 9067145
Alignment:
Q  18 aatgcataatttatgcaagatccgaggttcaaatcccg 55  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  9067108 aatgcataatttatgcaagatctgaggttcgaatcccg 9067145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 9399814 - 9399879
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| |||||||||||||||||||| | |||| | |||||||||| ||| || |||| ||||||||    
T  9399814 ggtcctttaagtttgaggtttgtaacatattggttctttaagttactttggtcacacgtaagtcct 9399879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 19163573 - 19163532
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    ||||||||||||||||||||| |||| |||||||| ||||||    
T  19163573 acaatgcataatttatgcaaggtccggggttcaaaccccgac 19163532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 24083307 - 24083263
Alignment:
Q  189 cttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||    
T  24083307 cttttaagtttgaggtttgtaacagattgat-ttttaagttatttt 24083263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 37117565 - 37117524
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatcc 53  Q
    |||||||||||||||| ||| ||||||| |||||||||||||    
T  37117565 atgaacaatgcataatatattcaagatctgaggttcaaatcc 37117524  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 9400097 - 9400041
Alignment:
Q  195 agtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||  |  ||| |||||||||||||||| || |||||||||||||    
T  9400097 agtttgaggtttgtagcatgttggtcctttaagttattttggtcacacataagtcct 9400041  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 15563903 - 15563967
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||| |||||| | ||| || ||| |||||||||| || | |||||||||||    
T  15563903 gtcttttaagtttgagggttgtaacatattaatacttaaagttattttggtcatacataagtcct 15563967  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 18533691 - 18533727
Alignment:
Q  14 gaacaatgcataatttatgcaagatccgaggttcaaa 50  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  18533691 gaacaatgcataatatatgcaagatccggggttcaaa 18533727  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 38414655 - 38414699
Alignment:
Q  190 ttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    ||||||||||||||||||||| ||||||||  |||||||| ||||    
T  38414655 ttttaagtttgaggtttgtaacagattgatgttttaagttttttt 38414699  T

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Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 1173345 - 1173290
Alignment:
Q  193 taagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagt 248  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  1173345 taagtttgaggtttgtaatagattgaaactttaagttattttagttacatataagt 1173290  T

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Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 2633204 - 2633263
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataa 246  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  2633204 gtcttttaagtttgagatttgtaatagattgttcatttaagttattttggttacacataa 2633263  T

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Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 7489902 - 7489962
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||| |||||||||||||    
T  7489902 tttaagtttgaggtttgtgagagattgatcatttaaattattttagtcacacataagtcct 7489962  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 7490022 - 7490074
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacaca 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  7490022 tttaagtttgaggtttgtaatagattgatcctttaaattattttggtcacaca 7490074  T

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Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 18608641 - 18608701
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| |||||||| |||||||||||||| || |||| ||||||||    
T  18608641 tttaagtttgaggtttgtaacagattgattctttaagttattttggtcacacttaagtcct 18608701  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 34173321 - 34173381
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||| |||||||| |||||| |||||||||||||||| |||||| |||||||||    
T  34173321 tttaagtttgatgtttgtaacagattggtcctttaagttattttggttacaaataagtcct 34173381  T

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Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 40892639 - 40892573
Alignment:
Q  185 tggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| ||| |||||||||||||||| | ||||||| ||||||||||||| || |||||||||||||    
T  40892639 tggtcctttgagtttgaggtttgtaacatattgatcatttaagttattttggtcacacataagtcct 40892573  T

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Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 52913029 - 52913094
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| |||||||| |||||  |||||||||||||||| || |||||||| ||||    
T  52913029 ggtcttttaagtttgaagtttgtaacagattagtcctttaagttattttggtcacacataaatcct 52913094  T

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Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 52913202 - 52913263
Alignment:
Q  191 tttaagtttgaggtttgtaat-agattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||||||||||||||  |||||| |||||||||||||| |||| |||||||||||||    
T  52913202 tttaagtttgaggtttgtaaacagattggtcctttaagttattctagtcacacataagtcct 52913263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 7489962 - 7490022
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||| || |||||||| ||||    
T  7489962 tttaagtttgaggtttgtaacagattaatcatttaagttattttggtcacacataaatcct 7490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 26879679 - 26879632
Alignment:
Q  187 gtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||    
T  26879679 gtcttttaagtttgaagtttgaaacagattgatcctttaagttatttt 26879632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 26879740 - 26879677
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||| |||||||||||||||||||| |||||| || |||||||||||||  | |||||||||||    
T  26879740 ggtcctttaagtttgaggtttgtaacagattggtcatttaagttatttttatcacacataagtc 26879677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 28832212 - 28832167
Alignment:
Q  12 atgaacaatgcataatttatgcaagatccgaggttcaaatcccgac 57  Q
    |||||||||||||||| |||||||| || |||||||||||||||||    
T  28832212 atgaacaatgcataatatatgcaaggtctgaggttcaaatcccgac 28832167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 33650740 - 33650675
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||| |||  |  ||||||||||||    
T  33650740 ggtcctttaagtttgaggttcgtaacagattgatcctttaagttactttgttcccacataagtcct 33650675  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 33650396 - 33650444
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||| |||||||||||||||| ||| |||||| ||||||||||||||||    
T  33650396 ggtcctttaagtttgaggtttataacagattggtcctttaagttatttt 33650444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 33650675 - 33650615
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||| |||| ||||||||| |||||| |||||||||||||||| ||  ||||||||||||    
T  33650675 tttaactttgtggtttgtaagagattggtcctttaagttattttggtctcacataagtcct 33650615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 2633597 - 2633538
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcc 250  Q
    |||||||||||||||||| | |||||| || ||||||||||||| || ||| ||||||||    
T  2633597 tttaagtttgaggtttgtgacagattggtcatttaagttattttggtcacatataagtcc 2633538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 34632193 - 34632232
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccg 55  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  34632193 acaatgtataatatatgcaagatccgaggttcaaatcccg 34632232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 52913093 - 52913156
Alignment:
Q  189 cttttaagtttgaggtttgt-aatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| || |||||| || ||||||||||| | || |||||||||||||    
T  52913093 cttttaagtttgaggtttgtaaacagattggtcatttaagttattctggtcacacataagtcct 52913156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 18980994 - 18981052
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    |||||||||||||||| ||||||||||| | ||||| ||||||| || |||| ||||||    
T  18980994 tttaagtttgaggtttttaatagattgaccttttaaattattttggtcacacctaagtc 18981052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 2633430 - 2633370
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||||||| | |||  | |||||||||||||| || || ||||||||||    
T  2633430 tttaagtttgaggtttgtaacatatttgttctttaagttatttttgtcacgcataagtcct 2633370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 4302476 - 4302516
Alignment:
Q  16 acaatgcataatttatgcaagatccgaggttcaaatcccga 56  Q
    |||||||||||| |||||||||||||  |||||||||||||    
T  4302476 acaatgcataatatatgcaagatccggagttcaaatcccga 4302516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 18278677 - 18278628
Alignment:
Q  194 aagtttgaggtttgtaatagattgatcctttaagttattttagttacacata 245  Q
    |||||||||||||||||||||||| |||  ||||||||||| || |||||||    
T  18278677 aagtttgaggtttgtaatagattgttcc--taagttattttggtcacacata 18278628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 18981053 - 18981113
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    ||||||||| || ||| ||||| ||||||| | ||||||||||| || |||||||||||||    
T  18981053 tttaagtttaagttttataataaattgatcatataagttattttggtcacacataagtcct 18981113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 50727706 - 50727646
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||||||| ||| | |||  || ||||||||||||||||  ||||||||||||    
T  50727706 tttaagtttgaggtttctaacaaatttgtcatttaagttattttagtcgcacataagtcct 50727646  T

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Target: scaffold0279 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 1269 - 1211
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtc 249  Q
    ||||||||||| |||||||| |||||| |||||||||||||||| || |||||||||||    
T  1269 tttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtc 1211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 1209 - 1149
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcctttaagttattttagttacacataagtcct 251  Q
    |||||||||||  |||||||  ||||| ||||||| |||||||| || |||||||||||||    
T  1209 tttaagtttgatatttgtaactgattggtcctttaggttattttggtcacacataagtcct 1149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 2516 - 2457
Alignment:
Q  191 tttaagtttgaggtttgtaatagattgatcc-tttaagttattttagttacacataagtc 249  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||  | |||||||||||    
T  2516 tttaagtttgaggtttgtaatagattggtccttttaagttattttgttcacacataagtc 2457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 12382 - 12336
Alignment:
Q  186 ggtcttttaagtttgaggtttgtaatagattgatcctttaagttatttt 234  Q
    |||| |||||||||||||||||||||||||||||  |||||||||||||    
T  12382 ggtcatttaagtttgaggtttgtaatagattgat--tttaagttatttt 12336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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