View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12990_high_9 (Length: 357)

Name: NF12990_high_9
Description: NF12990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12990_high_9
NF12990_high_9
[»] chr8 (79 HSPs)
chr8 (42-339)||(43599865-43600176)
chr8 (261-336)||(3189916-3189989)
chr8 (261-339)||(6942485-6942571)
chr8 (302-339)||(13647411-13647448)
chr8 (302-339)||(13747836-13747873)
chr8 (261-339)||(43283920-43284006)
chr8 (302-339)||(43656115-43656152)
chr8 (261-307)||(94505-94551)
chr8 (261-336)||(1337072-1337155)
chr8 (261-336)||(2787038-2787121)
chr8 (302-336)||(8265347-8265381)
chr8 (261-336)||(10736831-10736914)
chr8 (302-336)||(16449204-16449238)
chr8 (261-336)||(23178848-23178931)
chr8 (261-336)||(37717393-37717476)
chr8 (302-336)||(39169564-39169598)
chr8 (261-307)||(42880978-42881024)
chr8 (302-339)||(5332995-5333032)
chr8 (302-339)||(8827851-8827888)
chr8 (302-335)||(9407469-9407502)
chr8 (302-339)||(11491876-11491913)
chr8 (261-335)||(13406630-13406712)
chr8 (302-339)||(26022326-26022363)
chr8 (302-339)||(38344128-38344165)
chr8 (302-339)||(40298771-40298808)
chr8 (302-338)||(3227313-3227349)
chr8 (302-334)||(4654068-4654100)
chr8 (303-339)||(44673602-44673638)
chr8 (302-333)||(7388534-7388565)
chr8 (302-336)||(257618-257652)
chr8 (302-336)||(658268-658302)
chr8 (302-336)||(844004-844038)
chr8 (261-307)||(6659319-6659365)
chr8 (261-307)||(6739721-6739767)
chr8 (261-307)||(7194292-7194338)
chr8 (305-339)||(7813508-7813542)
chr8 (302-336)||(7816482-7816516)
chr8 (302-336)||(9187180-9187214)
chr8 (261-307)||(10200675-10200721)
chr8 (302-336)||(10568164-10568198)
chr8 (261-307)||(10594210-10594256)
chr8 (302-336)||(10761898-10761932)
chr8 (261-303)||(13773390-13773432)
chr8 (302-336)||(16432085-16432119)
chr8 (302-336)||(17027838-17027872)
chr8 (302-336)||(17072520-17072554)
chr8 (302-336)||(17558274-17558308)
chr8 (302-336)||(17575717-17575751)
chr8 (302-336)||(17698601-17698635)
chr8 (302-336)||(21133086-21133120)
chr8 (302-336)||(23858276-23858310)
chr8 (309-339)||(24458402-24458432)
chr8 (302-336)||(28909544-28909578)
chr8 (302-336)||(29514705-29514739)
chr8 (261-307)||(29716890-29716936)
chr8 (302-336)||(29729198-29729232)
chr8 (302-336)||(31450914-31450948)
chr8 (302-336)||(33838403-33838437)
chr8 (302-336)||(34266091-34266125)
chr8 (261-307)||(34413092-34413138)
chr8 (302-336)||(37291001-37291035)
chr8 (302-336)||(38219525-38219559)
chr8 (302-336)||(39587626-39587660)
chr8 (302-336)||(43186932-43186966)
chr8 (302-335)||(2626023-2626056)
chr8 (302-339)||(2792858-2792895)
chr8 (302-339)||(5570973-5571010)
chr8 (302-335)||(7763897-7763930)
chr8 (302-339)||(10573180-10573217)
chr8 (303-336)||(11127982-11128015)
chr8 (302-339)||(18926089-18926126)
chr8 (302-339)||(24480775-24480812)
chr8 (302-339)||(24571854-24571891)
chr8 (302-339)||(29170844-29170881)
chr8 (302-331)||(42035415-42035444)
chr8 (302-339)||(43403371-43403408)
chr8 (302-335)||(43980271-43980304)
chr8 (302-338)||(33604133-33604169)
chr8 (303-339)||(34472377-34472413)
[»] chr5 (68 HSPs)
chr5 (261-336)||(39919058-39919133)
chr5 (261-335)||(1729512-1729586)
chr5 (261-339)||(39886166-39886252)
chr5 (261-339)||(42525430-42525516)
chr5 (305-339)||(2363052-2363086)
chr5 (261-336)||(4745833-4745916)
chr5 (305-339)||(8478847-8478881)
chr5 (261-336)||(8968779-8968862)
chr5 (261-336)||(9835063-9835146)
chr5 (302-336)||(11188639-11188673)
chr5 (261-336)||(12463786-12463869)
chr5 (261-336)||(17545129-17545212)
chr5 (262-336)||(17967575-17967649)
chr5 (302-336)||(22569202-22569236)
chr5 (261-336)||(25400324-25400407)
chr5 (261-336)||(35515542-35515625)
chr5 (261-335)||(39165047-39165121)
chr5 (261-336)||(42320347-42320430)
chr5 (302-339)||(4153626-4153663)
chr5 (302-339)||(10241375-10241412)
chr5 (302-339)||(11786014-11786051)
chr5 (302-339)||(11897327-11897364)
chr5 (302-339)||(13958461-13958498)
chr5 (302-339)||(15241475-15241512)
chr5 (302-339)||(16386695-16386732)
chr5 (302-339)||(16789149-16789186)
chr5 (302-339)||(16891425-16891462)
chr5 (290-335)||(27498644-27498689)
chr5 (302-339)||(32423644-32423681)
chr5 (302-339)||(41319405-41319442)
chr5 (302-339)||(43580957-43580994)
chr5 (302-338)||(6526129-6526165)
chr5 (261-333)||(4417645-4417725)
chr5 (302-337)||(18050258-18050293)
chr5 (302-337)||(18638677-18638712)
chr5 (302-336)||(2301528-2301562)
chr5 (302-336)||(2848292-2848326)
chr5 (261-307)||(5966859-5966905)
chr5 (302-336)||(6414146-6414180)
chr5 (302-336)||(6518733-6518767)
chr5 (302-332)||(8148997-8149027)
chr5 (302-336)||(10404206-10404240)
chr5 (302-336)||(10905093-10905127)
chr5 (261-307)||(11774453-11774499)
chr5 (302-336)||(11795572-11795606)
chr5 (261-307)||(14641103-14641149)
chr5 (302-336)||(21749335-21749369)
chr5 (302-336)||(25648041-25648075)
chr5 (302-336)||(27765336-27765370)
chr5 (302-336)||(27798700-27798734)
chr5 (302-336)||(29045948-29045982)
chr5 (302-336)||(29691436-29691470)
chr5 (261-307)||(32505718-32505764)
chr5 (302-336)||(40081957-40081991)
chr5 (309-338)||(8571878-8571907)
chr5 (302-335)||(18026786-18026819)
chr5 (303-336)||(21962062-21962095)
chr5 (302-339)||(22732320-22732357)
chr5 (262-307)||(29154874-29154918)
chr5 (302-339)||(34389567-34389604)
chr5 (302-339)||(35241474-35241511)
chr5 (302-339)||(36124478-36124515)
chr5 (302-335)||(36888353-36888386)
chr5 (302-334)||(25729399-25729431)
chr5 (308-336)||(28308319-28308347)
chr5 (261-293)||(31700392-31700424)
chr5 (308-336)||(36735957-36735985)
chr5 (263-307)||(37034838-37034882)
[»] chr7 (63 HSPs)
chr7 (261-335)||(21388553-21388627)
chr7 (261-339)||(48288363-48288441)
chr7 (261-336)||(47255047-47255122)
chr7 (261-336)||(10244846-10244929)
chr7 (261-336)||(32619380-32619463)
chr7 (261-339)||(24061283-24061369)
chr7 (261-339)||(36174420-36174506)
chr7 (261-336)||(13720800-13720883)
chr7 (261-336)||(15238919-15239002)
chr7 (302-336)||(19331457-19331491)
chr7 (261-336)||(26801686-26801769)
chr7 (261-336)||(27510214-27510297)
chr7 (261-336)||(29617435-29617518)
chr7 (261-336)||(31026249-31026332)
chr7 (302-336)||(48119549-48119583)
chr7 (302-336)||(48719878-48719912)
chr7 (302-339)||(3529859-3529896)
chr7 (302-335)||(5804934-5804967)
chr7 (302-339)||(7401341-7401378)
chr7 (302-339)||(29281296-29281333)
chr7 (302-339)||(31077857-31077894)
chr7 (261-335)||(32676900-32676982)
chr7 (261-339)||(46534702-46534788)
chr7 (305-336)||(9697848-9697879)
chr7 (261-336)||(13730055-13730137)
chr7 (303-334)||(36622253-36622284)
chr7 (302-337)||(48269342-48269377)
chr7 (302-336)||(3062853-3062887)
chr7 (261-307)||(3766841-3766887)
chr7 (302-336)||(4960863-4960897)
chr7 (302-336)||(7525523-7525557)
chr7 (302-336)||(7691950-7691984)
chr7 (302-336)||(8174195-8174229)
chr7 (302-336)||(11453639-11453673)
chr7 (302-336)||(12640546-12640580)
chr7 (302-336)||(19752925-19752959)
chr7 (302-336)||(21762849-21762883)
chr7 (302-336)||(24508905-24508939)
chr7 (261-307)||(24692505-24692551)
chr7 (302-336)||(24781109-24781143)
chr7 (261-307)||(25318530-25318576)
chr7 (302-336)||(25833634-25833668)
chr7 (302-336)||(28547738-28547772)
chr7 (302-336)||(30388464-30388498)
chr7 (302-336)||(32047168-32047202)
chr7 (302-336)||(32856874-32856908)
chr7 (302-336)||(35645678-35645712)
chr7 (302-336)||(35950207-35950241)
chr7 (261-295)||(37300105-37300139)
chr7 (309-339)||(38151429-38151459)
chr7 (302-336)||(38889450-38889484)
chr7 (302-336)||(43119389-43119423)
chr7 (302-336)||(43633047-43633081)
chr7 (302-339)||(2229054-2229091)
chr7 (306-339)||(3532661-3532694)
chr7 (302-335)||(5990104-5990137)
chr7 (302-339)||(12615830-12615867)
chr7 (302-339)||(15074857-15074894)
chr7 (302-339)||(24732505-24732542)
chr7 (302-339)||(30940850-30940887)
chr7 (302-339)||(42182152-42182189)
chr7 (302-339)||(44616681-44616718)
chr7 (302-334)||(36391863-36391895)
[»] chr4 (77 HSPs)
chr4 (261-336)||(9661580-9661655)
chr4 (261-337)||(14944493-14944569)
chr4 (261-336)||(44602515-44602590)
chr4 (302-339)||(47934026-47934063)
chr4 (302-336)||(4700895-4700929)
chr4 (261-336)||(6371144-6371227)
chr4 (261-336)||(12581985-12582068)
chr4 (302-336)||(31852570-31852604)
chr4 (302-336)||(37935940-37935974)
chr4 (261-336)||(43147341-43147424)
chr4 (261-336)||(43596925-43597008)
chr4 (261-336)||(46774987-46775070)
chr4 (302-336)||(48569133-48569167)
chr4 (261-336)||(49447151-49447234)
chr4 (261-336)||(52731396-52731479)
chr4 (302-335)||(3763966-3763999)
chr4 (302-339)||(10417175-10417212)
chr4 (302-339)||(16342026-16342063)
chr4 (302-339)||(22788628-22788665)
chr4 (302-339)||(39696292-39696329)
chr4 (302-339)||(55021633-55021670)
chr4 (305-336)||(13564225-13564256)
chr4 (261-333)||(55251311-55251391)
chr4 (261-307)||(637129-637175)
chr4 (261-307)||(1458012-1458058)
chr4 (302-336)||(2222618-2222652)
chr4 (302-336)||(3036012-3036046)
chr4 (302-336)||(4590325-4590359)
chr4 (261-307)||(5179876-5179922)
chr4 (302-336)||(5304967-5305001)
chr4 (302-336)||(10141062-10141096)
chr4 (302-336)||(10402520-10402554)
chr4 (302-336)||(10406986-10407020)
chr4 (305-339)||(13264228-13264262)
chr4 (261-307)||(22230428-22230474)
chr4 (302-336)||(35948140-35948174)
chr4 (302-336)||(40051701-40051735)
chr4 (302-336)||(40994060-40994094)
chr4 (302-336)||(42218829-42218863)
chr4 (261-307)||(42231542-42231588)
chr4 (309-339)||(42664066-42664096)
chr4 (261-307)||(45112105-45112151)
chr4 (302-336)||(45126211-45126245)
chr4 (302-336)||(45849126-45849160)
chr4 (261-307)||(46105565-46105611)
chr4 (302-336)||(48744286-48744320)
chr4 (302-332)||(48949708-48949738)
chr4 (302-336)||(48950863-48950897)
chr4 (261-307)||(49056805-49056851)
chr4 (302-336)||(49757241-49757275)
chr4 (302-336)||(49901561-49901595)
chr4 (309-339)||(51759614-51759644)
chr4 (302-336)||(53634208-53634242)
chr4 (302-336)||(55536458-55536492)
chr4 (261-339)||(4234239-4234325)
chr4 (302-335)||(8433581-8433614)
chr4 (302-339)||(8564250-8564287)
chr4 (302-339)||(9761194-9761231)
chr4 (302-339)||(12267597-12267634)
chr4 (302-339)||(12504597-12504634)
chr4 (302-339)||(15208601-15208638)
chr4 (302-339)||(21935556-21935593)
chr4 (302-335)||(29771257-29771290)
chr4 (302-335)||(31016414-31016447)
chr4 (302-335)||(33325508-33325541)
chr4 (302-339)||(37251192-37251229)
chr4 (302-339)||(41854212-41854249)
chr4 (302-339)||(42395306-42395343)
chr4 (302-339)||(46582713-46582750)
chr4 (302-339)||(46998322-46998359)
chr4 (302-339)||(48825773-48825810)
chr4 (302-339)||(52798356-52798393)
chr4 (302-339)||(56087908-56087945)
chr4 (303-335)||(194635-194667)
chr4 (267-307)||(17709454-17709494)
chr4 (302-330)||(27434113-27434141)
chr4 (302-334)||(42916790-42916822)
[»] chr2 (50 HSPs)
chr2 (261-332)||(19612745-19612816)
chr2 (261-339)||(37063550-37063628)
chr2 (261-336)||(38387693-38387768)
chr2 (261-337)||(40931166-40931241)
chr2 (302-339)||(41187338-41187375)
chr2 (291-335)||(9937486-9937530)
chr2 (261-336)||(4562709-4562792)
chr2 (261-336)||(20296448-20296531)
chr2 (302-336)||(29772235-29772269)
chr2 (261-336)||(30390326-30390409)
chr2 (261-336)||(41509546-41509629)
chr2 (302-336)||(41566841-41566875)
chr2 (261-335)||(2643727-2643809)
chr2 (302-339)||(3439027-3439064)
chr2 (302-339)||(16754762-16754799)
chr2 (302-339)||(28153096-28153133)
chr2 (302-339)||(37486887-37486924)
chr2 (261-329)||(38179217-38179285)
chr2 (261-339)||(3287011-3287096)
chr2 (302-336)||(1260263-1260297)
chr2 (302-336)||(1309083-1309117)
chr2 (302-336)||(1844896-1844930)
chr2 (302-336)||(5613033-5613067)
chr2 (302-336)||(6331640-6331674)
chr2 (305-339)||(8742778-8742812)
chr2 (302-336)||(16384999-16385033)
chr2 (302-336)||(17499028-17499062)
chr2 (302-336)||(18278374-18278408)
chr2 (302-336)||(18694864-18694898)
chr2 (302-336)||(28194711-28194745)
chr2 (302-332)||(28692446-28692476)
chr2 (265-307)||(30849766-30849808)
chr2 (302-336)||(33228890-33228924)
chr2 (302-336)||(34614058-34614092)
chr2 (302-336)||(38400393-38400427)
chr2 (302-336)||(40473507-40473541)
chr2 (302-336)||(40535406-40535440)
chr2 (302-335)||(5474986-5475019)
chr2 (303-336)||(5521177-5521210)
chr2 (266-307)||(20972843-20972884)
chr2 (302-339)||(22653598-22653635)
chr2 (302-339)||(29449527-29449564)
chr2 (302-339)||(30932400-30932437)
chr2 (302-335)||(39408648-39408681)
chr2 (306-339)||(43895996-43896029)
chr2 (302-339)||(44186522-44186559)
chr2 (306-339)||(44948679-44948712)
chr2 (305-337)||(13975208-13975240)
chr2 (302-330)||(14215961-14215989)
chr2 (265-293)||(36072606-36072634)
[»] chr1 (59 HSPs)
chr1 (261-336)||(46021844-46021919)
chr1 (261-336)||(3269649-3269724)
chr1 (302-339)||(3560335-3560372)
chr1 (261-336)||(1570149-1570232)
chr1 (261-336)||(4482555-4482638)
chr1 (261-336)||(6438021-6438104)
chr1 (302-336)||(7166184-7166218)
chr1 (302-336)||(11215080-11215114)
chr1 (261-336)||(15819558-15819641)
chr1 (302-336)||(18467155-18467189)
chr1 (261-336)||(18534031-18534114)
chr1 (302-336)||(19011434-19011468)
chr1 (302-336)||(22563465-22563499)
chr1 (302-336)||(45333669-45333703)
chr1 (302-336)||(45517225-45517259)
chr1 (261-336)||(46965770-46965853)
chr1 (302-336)||(51050269-51050303)
chr1 (261-335)||(16343058-16343140)
chr1 (302-339)||(27642681-27642718)
chr1 (302-339)||(29188715-29188752)
chr1 (299-339)||(1836571-1836611)
chr1 (303-339)||(9866138-9866174)
chr1 (302-334)||(51942373-51942405)
chr1 (302-337)||(25999929-25999964)
chr1 (302-336)||(2277833-2277867)
chr1 (302-336)||(7191111-7191145)
chr1 (302-336)||(8984463-8984497)
chr1 (302-336)||(12048081-12048115)
chr1 (302-336)||(12502211-12502245)
chr1 (302-336)||(12650341-12650375)
chr1 (302-336)||(13773247-13773281)
chr1 (302-336)||(15390299-15390333)
chr1 (261-307)||(16526171-16526217)
chr1 (261-307)||(18551627-18551673)
chr1 (302-336)||(21265735-21265769)
chr1 (302-336)||(27818647-27818681)
chr1 (302-336)||(28564302-28564336)
chr1 (302-336)||(32594330-32594364)
chr1 (302-336)||(32970758-32970792)
chr1 (309-339)||(33736853-33736883)
chr1 (302-336)||(40519500-40519534)
chr1 (302-336)||(42458160-42458194)
chr1 (261-307)||(50899504-50899550)
chr1 (302-335)||(2754439-2754472)
chr1 (302-339)||(3694870-3694907)
chr1 (302-335)||(13538404-13538437)
chr1 (302-339)||(16313660-16313697)
chr1 (302-339)||(33218843-33218880)
chr1 (302-335)||(35283580-35283613)
chr1 (302-339)||(36726640-36726677)
chr1 (302-339)||(43884873-43884910)
chr1 (302-339)||(44732712-44732749)
chr1 (302-339)||(46225457-46225494)
chr1 (302-335)||(47642940-47642973)
chr1 (302-339)||(52369676-52369713)
chr1 (302-338)||(21401388-21401424)
chr1 (302-334)||(34656354-34656386)
chr1 (304-336)||(48643704-48643736)
chr1 (308-336)||(50899460-50899488)
[»] scaffold0009 (1 HSPs)
scaffold0009 (261-336)||(266662-266737)
[»] chr6 (50 HSPs)
chr6 (261-339)||(894594-894672)
chr6 (261-336)||(4408388-4408463)
chr6 (302-339)||(3640593-3640630)
chr6 (302-339)||(26347483-26347520)
chr6 (261-339)||(31802083-31802169)
chr6 (302-336)||(3795731-3795765)
chr6 (261-336)||(7207874-7207957)
chr6 (302-336)||(7425445-7425479)
chr6 (261-336)||(17441796-17441879)
chr6 (261-336)||(19953785-19953868)
chr6 (261-336)||(27218914-27218997)
chr6 (302-336)||(32166448-32166482)
chr6 (261-336)||(32611511-32611594)
chr6 (302-339)||(2426143-2426180)
chr6 (302-339)||(3012677-3012714)
chr6 (302-339)||(7545408-7545445)
chr6 (264-336)||(8857123-8857196)
chr6 (302-339)||(12284200-12284237)
chr6 (302-339)||(22997415-22997452)
chr6 (302-339)||(23790949-23790986)
chr6 (302-339)||(31803549-31803586)
chr6 (305-336)||(20729033-20729064)
chr6 (302-336)||(2816969-2817003)
chr6 (302-336)||(3794130-3794164)
chr6 (302-336)||(5052031-5052065)
chr6 (302-336)||(7328604-7328638)
chr6 (302-336)||(7414403-7414437)
chr6 (302-336)||(7581123-7581157)
chr6 (302-332)||(9435705-9435735)
chr6 (302-336)||(9704495-9704529)
chr6 (302-336)||(10517278-10517312)
chr6 (261-307)||(10934629-10934675)
chr6 (302-336)||(13116581-13116615)
chr6 (302-336)||(15963900-15963934)
chr6 (302-336)||(19892233-19892267)
chr6 (302-336)||(28148690-28148724)
chr6 (302-336)||(30885527-30885561)
chr6 (302-336)||(33573896-33573930)
chr6 (302-336)||(33646914-33646948)
chr6 (302-339)||(743642-743679)
chr6 (302-335)||(7865313-7865346)
chr6 (302-335)||(10913037-10913070)
chr6 (302-335)||(13158667-13158700)
chr6 (302-335)||(13163523-13163556)
chr6 (302-339)||(20584152-20584189)
chr6 (302-339)||(22574949-22574986)
chr6 (303-336)||(28842734-28842767)
chr6 (302-339)||(30916400-30916437)
chr6 (302-334)||(7418357-7418389)
chr6 (303-339)||(24618453-24618489)
[»] chr3 (89 HSPs)
chr3 (269-335)||(39169799-39169865)
chr3 (290-336)||(6447089-6447135)
chr3 (265-335)||(45871051-45871121)
chr3 (302-339)||(38819278-38819315)
chr3 (302-336)||(3748559-3748593)
chr3 (261-336)||(4139030-4139113)
chr3 (302-336)||(6488203-6488237)
chr3 (261-336)||(6919920-6920003)
chr3 (302-336)||(17218567-17218601)
chr3 (261-336)||(18194368-18194451)
chr3 (261-307)||(19591573-19591619)
chr3 (261-339)||(21405193-21405270)
chr3 (302-336)||(22501888-22501922)
chr3 (261-336)||(32144614-32144697)
chr3 (302-336)||(33606897-33606931)
chr3 (302-336)||(34757595-34757629)
chr3 (261-336)||(37800568-37800651)
chr3 (261-336)||(40548333-40548416)
chr3 (261-336)||(40933788-40933871)
chr3 (261-336)||(50234154-50234237)
chr3 (261-336)||(50496771-50496854)
chr3 (302-339)||(3894623-3894660)
chr3 (261-335)||(10176861-10176943)
chr3 (302-339)||(11820083-11820120)
chr3 (302-339)||(17729070-17729107)
chr3 (302-339)||(19030299-19030336)
chr3 (302-339)||(24430228-24430265)
chr3 (261-335)||(31327676-31327758)
chr3 (302-339)||(40963665-40963702)
chr3 (302-335)||(49194650-49194683)
chr3 (302-339)||(52410195-52410232)
chr3 (302-339)||(54626421-54626458)
chr3 (261-329)||(49728728-49728796)
chr3 (261-334)||(52974012-52974093)
chr3 (302-337)||(34898723-34898758)
chr3 (261-307)||(2007077-2007123)
chr3 (302-336)||(2523005-2523039)
chr3 (302-336)||(4541976-4542010)
chr3 (302-336)||(7270034-7270068)
chr3 (302-336)||(7920399-7920433)
chr3 (302-336)||(8964733-8964767)
chr3 (302-336)||(10482810-10482844)
chr3 (302-336)||(13638202-13638236)
chr3 (302-336)||(14887309-14887343)
chr3 (306-336)||(15299155-15299185)
chr3 (302-336)||(17608276-17608310)
chr3 (261-335)||(20489845-20489919)
chr3 (302-336)||(27669000-27669034)
chr3 (302-336)||(28550270-28550304)
chr3 (302-336)||(28689629-28689663)
chr3 (302-336)||(30555184-30555218)
chr3 (302-336)||(30779524-30779558)
chr3 (302-336)||(31327458-31327492)
chr3 (302-336)||(33706684-33706718)
chr3 (302-336)||(37488417-37488451)
chr3 (302-336)||(39720014-39720048)
chr3 (302-332)||(39966035-39966065)
chr3 (302-336)||(41936364-41936398)
chr3 (302-336)||(44764527-44764561)
chr3 (302-336)||(45198802-45198836)
chr3 (302-336)||(45551766-45551800)
chr3 (302-336)||(45701423-45701457)
chr3 (302-336)||(48251651-48251685)
chr3 (261-307)||(49447168-49447214)
chr3 (302-336)||(50675699-50675733)
chr3 (302-336)||(51467266-51467300)
chr3 (302-336)||(53432694-53432728)
chr3 (302-336)||(53578034-53578068)
chr3 (302-336)||(53752657-53752691)
chr3 (302-336)||(55007980-55008014)
chr3 (302-339)||(4860240-4860277)
chr3 (302-339)||(4880248-4880285)
chr3 (302-335)||(9220211-9220244)
chr3 (303-336)||(15492171-15492204)
chr3 (302-335)||(16906777-16906810)
chr3 (302-335)||(23164111-23164144)
chr3 (302-339)||(31316713-31316750)
chr3 (302-335)||(32256512-32256545)
chr3 (302-335)||(33225306-33225339)
chr3 (302-339)||(34579412-34579449)
chr3 (302-339)||(45512949-45512986)
chr3 (302-335)||(47098811-47098844)
chr3 (302-339)||(48739698-48739735)
chr3 (302-335)||(53347248-53347281)
chr3 (303-336)||(53906459-53906492)
chr3 (302-334)||(17472289-17472321)
chr3 (302-334)||(19866550-19866582)
chr3 (302-334)||(25279018-25279050)
chr3 (266-302)||(27739805-27739841)
[»] scaffold0121 (1 HSPs)
scaffold0121 (261-339)||(12024-12110)
[»] scaffold0024 (1 HSPs)
scaffold0024 (261-339)||(59813-59899)
[»] scaffold0608 (1 HSPs)
scaffold0608 (261-336)||(8996-9079)
[»] scaffold0445 (1 HSPs)
scaffold0445 (302-336)||(3971-4005)
[»] scaffold0079 (1 HSPs)
scaffold0079 (302-339)||(50798-50835)
[»] scaffold1185 (1 HSPs)
scaffold1185 (302-336)||(2350-2384)
[»] scaffold0690 (1 HSPs)
scaffold0690 (302-336)||(3745-3779)
[»] scaffold0460 (1 HSPs)
scaffold0460 (302-336)||(12538-12572)
[»] scaffold0366 (1 HSPs)
scaffold0366 (261-307)||(854-900)
[»] scaffold0276 (1 HSPs)
scaffold0276 (302-336)||(1339-1373)
[»] scaffold0187 (2 HSPs)
scaffold0187 (261-307)||(11114-11160)
scaffold0187 (261-307)||(21442-21488)
[»] scaffold0128 (1 HSPs)
scaffold0128 (302-336)||(17699-17733)
[»] scaffold0088 (1 HSPs)
scaffold0088 (302-336)||(10783-10817)
[»] scaffold0028 (1 HSPs)
scaffold0028 (302-336)||(112187-112221)
[»] scaffold0014 (1 HSPs)
scaffold0014 (302-336)||(12218-12252)
[»] scaffold0002 (1 HSPs)
scaffold0002 (302-336)||(8782-8816)
[»] scaffold0394 (1 HSPs)
scaffold0394 (302-335)||(1341-1374)
[»] scaffold0330 (1 HSPs)
scaffold0330 (302-335)||(6847-6880)
[»] scaffold0254 (1 HSPs)
scaffold0254 (302-335)||(1396-1429)
[»] scaffold0157 (1 HSPs)
scaffold0157 (302-339)||(15843-15880)
[»] scaffold0068 (1 HSPs)
scaffold0068 (302-335)||(45989-46022)
[»] scaffold0031 (2 HSPs)
scaffold0031 (302-339)||(49955-49992)
scaffold0031 (302-339)||(93936-93973)


Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-118; HSPs: 79)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 42 - 339
Target Start/End: Original strand, 43599865 - 43600176
Alignment:
Q  42 gtatattacatttaaa-tgaagaaaagaactatgctaattgagcaactacgatatgaatttattaactatttgaattaaatcatttgaattaaaatttct 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43599865 gtatattacatttaaaatgaagaaaagaactatgctaattgagcaactacgatatgaatttattaactatttgaattaaatcatttgaattaaaatttct 43599964  T
Q  141 gttagctcaattacacgaagtaaccacaatttcaacttaaattgagttaattacttatataaccgaataaatcatatgccttgattaaattaaccatatc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43599965 gttagctcaattacacgaagtaaccacaatttcaacttaaattgagttaattacttatataaccgaataaatcatatgccttgattaaattaaccatatt 43600064  T
Q  241 ttatctccgtaagcttagct-------------ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctct 327  Q
    |||||||||||| ||||| |             |||||||||||||||||| | ||||||| ||||||||||||||||||| ||||||| |||||||| |    
T  43600065 ttatctccgtaaacttagttattgatatgaatattgcatattatatgtaggggtcggagttcgaaccccgtacactccacagtttaattatgtgagcttt 43600164  T
Q  328 agccactagact 339  Q
    | ||| ||||||    
T  43600165 aaccattagact 43600176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 3189989 - 3189916
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| |||   ||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3189989 ttgcatattatatgcaggt--cggggttcgaaccccggacactccacaattaaattgtgtgagctctagccactag 3189916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 6942571 - 6942485
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| |||||||||||||||||||||||||||    
T  6942571 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagact 6942485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 13647448 - 13647411
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13647448 ctccacaatttaattgtgtgagctctagccactagact 13647411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 13747873 - 13747836
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13747873 ctccacaatttaattgtgtgagctctagccactagact 13747836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 43284006 - 43283920
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca--------caatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||        ||||| |||||||||||||||||||||||||||    
T  43284006 ttgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagctctagccactagact 43283920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 43656115 - 43656152
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43656115 ctccacaatttaattgtgtgagctctagccactagact 43656152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 94551 - 94505
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||||    
T  94551 ttgcatattatatgcaggagccggagttcgaaccccggacactccac 94505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 1337155 - 1337072
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  1337155 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 1337072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 2787121 - 2787038
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  2787121 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 2787038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 8265347 - 8265381
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  8265347 ctccacaatttaattgtgtgagctctagccactag 8265381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 10736914 - 10736831
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  10736914 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 10736831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 16449204 - 16449238
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  16449204 ctccacaatttaattgtgtgagctctagccactag 16449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 23178931 - 23178848
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||||||    
T  23178931 ttgcatattatatgcaggggccggggttcgaaccccggacactccacttcttcacaatttaattgtgtgagctctagccactag 23178848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 37717393 - 37717476
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  37717393 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 37717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 39169564 - 39169598
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  39169564 ctccacaatttaattgtgtgagctctagccactag 39169598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 42880978 - 42881024
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||    
T  42880978 ttgcatattatatgtaggagccggggttcgaaccccggacactccac 42881024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 5332995 - 5333032
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  5332995 ctccacaattaaattgtgtgagctctagccactagact 5333032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 8827888 - 8827851
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||| |||||||||    
T  8827888 ctccacaatttaattgtgtgagctctagtcactagact 8827851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 9407469 - 9407502
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||||||||||||||||||||||||||||||    
T  9407469 ctccacaatttaattgtgtgagctctagccacta 9407502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 11491876 - 11491913
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11491876 ctccacaattaaattgtgtgagctctagccactagact 11491913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 13406630 - 13406712
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| ||||||||||||| |||||| | |||        |||||||||| |||||||||||||||||||||||    
T  13406630 ttgcatattatatgcaggagccggagttcgaaccctggacactccacttctccacaattaaattgtgtgagctctagccacta 13406712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 26022326 - 26022363
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  26022326 ctccacaatttaattgtgtgacctctagccactagact 26022363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 38344128 - 38344165
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  38344128 ctccacaattaaattgtgtgagctctagccactagact 38344165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 40298771 - 40298808
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  40298771 ctccacaatttaattgtgtgaactctagccactagact 40298808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 3227313 - 3227349
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagac 338  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3227313 ctccacaattaaattgtgtgagctctagccactagac 3227349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 4654100 - 4654068
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||||||||||||||||||||||||||    
T  4654100 ctccacaatttaattgtgtgagctctagccact 4654068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 44673638 - 44673602
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||| |||||||||||||||||||||||||||    
T  44673638 tccacaattaaattgtgtgagctctagccactagact 44673602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 333
Target Start/End: Original strand, 7388534 - 7388565
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccac 333  Q
    ||||||||||||||||||||||||||||||||    
T  7388534 ctccacaatttaattgtgtgagctctagccac 7388565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 257618 - 257652
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  257618 ctccacaattaaattgtgtgagctctagccactag 257652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 658302 - 658268
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  658302 ctccacaattaaattgtgtgagctctagccactag 658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 844038 - 844004
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  844038 ctccacaattaaattgtgtgagctctagccactag 844004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 6659319 - 6659365
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  6659319 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 6659365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 6739721 - 6739767
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  6739721 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 6739767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 7194292 - 7194338
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  7194292 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 7194338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 7813542 - 7813508
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||| ||||    
T  7813542 cacaatttaattgtgtgagctctagccactggact 7813508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7816482 - 7816516
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  7816482 ctccacaattaaattgtgtgagctctagccactag 7816516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 9187214 - 9187180
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  9187214 ctccacaattaaattgtgtgagctctagccactag 9187180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 10200721 - 10200675
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  10200721 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 10200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 10568164 - 10568198
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10568164 ctccacaattaaattgtgtgagctctagccactag 10568198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 10594256 - 10594210
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||| ||||||| ||||||||| ||| ||||||||||||||||||    
T  10594256 ttgcattttatatgcaggagccggggttcgaaccccgtacactccac 10594210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 10761898 - 10761932
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10761898 ctccacaattaaattgtgtgagctctagccactag 10761932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 13773432 - 13773390
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacact 303  Q
    |||||||||||||||||||||||| ||| |||||||| |||||    
T  13773432 ttgcatattatatgtaggagccggggttcgaaccccggacact 13773390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 16432119 - 16432085
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||| |||||||||||||||||||||||||||||    
T  16432119 ctccataatttaattgtgtgagctctagccactag 16432085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 17027872 - 17027838
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  17027872 ctccacaattaaattgtgtgagctctagccactag 17027838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 17072554 - 17072520
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  17072554 ctccacaattaaattgtgtgagctctagccactag 17072520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 17558308 - 17558274
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  17558308 ctccacaattaaattgtgtgagctctagccactag 17558274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 17575717 - 17575751
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  17575717 ctccacaattaaattgtgtgagctctagccactag 17575751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 17698601 - 17698635
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  17698601 ctccacaattaaattgtgtgagctctagccactag 17698635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 21133086 - 21133120
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  21133086 ctccacaattaaattgtgtgagctctagccactag 21133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 23858276 - 23858310
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  23858276 ctccacaatttaattgtgtgagttctagccactag 23858310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Original strand, 24458402 - 24458432
Alignment:
Q  309 atttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||||    
T  24458402 atttaattgtgtgagctctagccactagact 24458432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 28909544 - 28909578
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  28909544 ctccacaattaaattgtgtgagctctagccactag 28909578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 29514705 - 29514739
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  29514705 ctccacaattaaattgtgtgagctctagccactag 29514739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 29716890 - 29716936
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  29716890 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 29716936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 29729198 - 29729232
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||| ||||||    
T  29729198 ctccacaatttaattgtgtgagctctagtcactag 29729232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 31450948 - 31450914
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  31450948 ctccacaattaaattgtgtgagctctagccactag 31450914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 33838403 - 33838437
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  33838403 ctccacaattaaattgtgtgagctctagccactag 33838437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 34266091 - 34266125
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  34266091 ctccacaattaaattgtgtgagctctagccactag 34266125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 34413092 - 34413138
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  34413092 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 34413138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 37291001 - 37291035
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  37291001 ctccacaattaaattgtgtgagctctagccactag 37291035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 38219559 - 38219525
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  38219559 ctccacaattaaattgtgtgagctctagccactag 38219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 39587626 - 39587660
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  39587626 ctccacaattaaattgtgtgagctctagccactag 39587660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 43186932 - 43186966
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  43186932 ctccacaattaaattgtgtgagctctagccactag 43186966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 2626056 - 2626023
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  2626056 ctccacaattaaattgtgtgagctctagccacta 2626023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 2792858 - 2792895
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  2792858 ctccacaatttaattgtgtgagctccaaccactagact 2792895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 5570973 - 5571010
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  5570973 ctccacaattaaattatgtgagctctagccactagact 5571010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 7763930 - 7763897
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  7763930 ctccacaattaaattgtgtgagctctagccacta 7763897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 10573180 - 10573217
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  10573180 ctccacaatttaattgtgcgagctctagccaccagact 10573217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 11127982 - 11128015
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||| ||||||||||||||||||||||||    
T  11127982 tccacaattaaattgtgtgagctctagccactag 11128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 18926126 - 18926089
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  18926126 ctccacaattaaattgtgtgagctctagccattagact 18926089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 24480812 - 24480775
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  24480812 ctccacaattaaattatgtgagctctagccactagact 24480775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 24571891 - 24571854
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  24571891 ctccacaatttaattatgtgagctctagccattagact 24571854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 29170844 - 29170881
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  29170844 ctccacaattaaattgtgtgagttctagccactagact 29170881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 331
Target Start/End: Original strand, 42035415 - 42035444
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagcc 331  Q
    ||||||||||||||||||||||||||||||    
T  42035415 ctccacaatttaattgtgtgagctctagcc 42035444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 43403371 - 43403408
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  43403371 ctccacaattaaattgtgtgagctctagctactagact 43403408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 43980304 - 43980271
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||||||||||||| |||||||||    
T  43980304 ctccacaatttaattgtgtgagctttagccacta 43980271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 33604169 - 33604133
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagac 338  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  33604169 ctccacaattaaattgtgtgagttctagccactagac 33604133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 34472377 - 34472413
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  34472377 tccacaattaaattgtgtgagctctaaccactagact 34472413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 39919133 - 39919058
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  39919133 ttgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtgtgagctctagccactag 39919058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 1729512 - 1729586
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||||||| || |  |||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  1729512 ttgcatattatatgtaggggctgaggtttgaaccccggacactctacaatttaattgtgtgagctctagtcacta 1729586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 39886252 - 39886166
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||| || ||| |||||||| |||||||||        |||| |||||||||||||||||||||||||||    
T  39886252 ttgcatattatatgtaggagctggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagact 39886166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 42525430 - 42525516
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| |||||||||||||||||||||||||||    
T  42525430 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagact 42525516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 2363052 - 2363086
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||||||||    
T  2363052 cacaatttaattgtgtgagctctagccactagact 2363086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 4745916 - 4745833
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  4745916 ttgcatattatatgaaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 4745833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 8478881 - 8478847
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||||||||    
T  8478881 cacaatttaattgtgtgagctctagccactagact 8478847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 8968779 - 8968862
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  8968779 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 8968862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 9835063 - 9835146
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  9835063 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 9835146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 11188673 - 11188639
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  11188673 ctccacaatttaattgtgtgagctctagccactag 11188639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 12463786 - 12463869
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  12463786 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 12463869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 17545212 - 17545129
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||||||    
T  17545212 ttgcatattatatgcaggggccggggttcgaaccccggacactccacttctccataatttaattgtgtgagctctagccactag 17545129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 17967649 - 17967575
Alignment:
Q  262 tgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||| |  || ||| | |||||| || |||||||||| |||||||||||||||| |||||||    
T  17967649 tgcatattatatgtaggggtaggggttcgtaccccggacgctccacaattaaattgtgtgagctctaaccactag 17967575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 22569236 - 22569202
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  22569236 ctccacaatttaattgtgtgagctctagccactag 22569202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 25400407 - 25400324
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  25400407 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 25400324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 35515542 - 35515625
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacact--------ccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||        |||||||| ||||||||||||||||||||||||    
T  35515542 ttgcatattatatgcaggagccggggttcgaaccccggacacttcacttctccacaattaaattgtgtgagctctagccactag 35515625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 39165047 - 39165121
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| |||||| || ||| |||||||  |||||| |||||| ||||||||||||| ||| |||||    
T  39165047 ttgcatattatatgcaggagctggggttcgaaccccagacactctacaattaaattgtgtgagctttagtcacta 39165121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 42320347 - 42320430
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||| ||||||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  42320347 ttgcatattatatgcaggagtcggagttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccactag 42320430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 4153626 - 4153663
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4153626 ctccacaattaaattgtgtgagctctagccactagact 4153663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 10241375 - 10241412
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  10241375 ctccataatttaattgtgtgagctctagccactagact 10241412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 11786051 - 11786014
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11786051 ctccacaattaaattgtgtgagctctagccactagact 11786014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 11897327 - 11897364
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11897327 ctccacaattaaattgtgtgagctctagccactagact 11897364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 13958461 - 13958498
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  13958461 ctccataatttaattgtgtgagctctagccactagact 13958498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 15241475 - 15241512
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  15241475 ctccacaattaaattgtgtgagctctagccactagact 15241512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 16386732 - 16386695
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16386732 ctccacaattaaattgtgtgagctctagccactagact 16386695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 16789149 - 16789186
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16789149 ctccacaattaaattgtgtgagctctagccactagact 16789186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 16891425 - 16891462
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16891425 ctccacaattaaattgtgtgagctctagccactagact 16891462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 27498644 - 27498689
Alignment:
Q  290 gaaccccgtacactccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  27498644 gaaccccggacaatccacaattaaattgtgtgagctctagccacta 27498689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 32423644 - 32423681
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||| |||||||||||||||    
T  32423644 ctccacaatttaattgtgtgagttctagccactagact 32423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 41319442 - 41319405
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  41319442 ctccacaattaaattgtgtgagctctagccactagact 41319405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 43580957 - 43580994
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  43580957 ctccacaattaaattgtgtgagctctagccactagact 43580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 6526129 - 6526165
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagac 338  Q
    |||||||||| ||||||||||||||||||||||||||    
T  6526129 ctccacaattaaattgtgtgagctctagccactagac 6526165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 4417725 - 4417645
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccac 333  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||    
T  4417725 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccac 4417645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 18050258 - 18050293
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactaga 337  Q
    ||||||||||||||||||||||||||||| ||||||    
T  18050258 ctccacaatttaattgtgtgagctctagcaactaga 18050293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 18638677 - 18638712
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactaga 337  Q
    |||||||||| |||||||||||||||||||||||||    
T  18638677 ctccacaattaaattgtgtgagctctagccactaga 18638712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 2301562 - 2301528
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  2301562 ctccacaattaaattgtgtgagctctagccactag 2301528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 2848292 - 2848326
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  2848292 ctccacaattaaattgtgtgagctctagccactag 2848326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 5966859 - 5966905
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  5966859 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 5966905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 6414146 - 6414180
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  6414146 ctccacaattaaattgtgtgagctctagccactag 6414180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 6518767 - 6518733
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  6518767 ctccacaattaaattgtgtgagctctagccactag 6518733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Complemental strand, 8149027 - 8148997
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagcca 332  Q
    |||||||||||||||||||||||||||||||    
T  8149027 ctccacaatttaattgtgtgagctctagcca 8148997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 10404206 - 10404240
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10404206 ctccacaattaaattgtgtgagctctagccactag 10404240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 10905127 - 10905093
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||| ||||||||||||||||    
T  10905127 ctccacaatttaattgtgcgagctctagccactag 10905093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 11774499 - 11774453
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  11774499 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 11774453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 11795572 - 11795606
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  11795572 ctccacaattaaattgtgtgagctctagccactag 11795606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 14641149 - 14641103
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  14641149 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 14641103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 21749369 - 21749335
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  21749369 ctccacaattaaattgtgtgagctctagccactag 21749335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 25648075 - 25648041
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  25648075 ctccacaattaaattgtgtgagctctagccactag 25648041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 27765336 - 27765370
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  27765336 ctccacaattaaattgtgtgagctctagccactag 27765370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 27798700 - 27798734
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  27798700 ctccacaattaaattgtgtgagctctagccactag 27798734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 29045948 - 29045982
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||||||||| |||||||    
T  29045948 ctccacaatttaattgtgtgagctctaaccactag 29045982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 29691436 - 29691470
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  29691436 ctccacaattaaattgtgtgagctctagccactag 29691470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 32505718 - 32505764
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  32505718 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 32505764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 40081957 - 40081991
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  40081957 ctccacaattaaattgtgtgagctctagccactag 40081991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 338
Target Start/End: Original strand, 8571878 - 8571907
Alignment:
Q  309 atttaattgtgtgagctctagccactagac 338  Q
    ||||||||||||||||||||||||||||||    
T  8571878 atttaattgtgtgagctctagccactagac 8571907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 18026819 - 18026786
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  18026819 ctccacaattaaattgtgtgagctctagccacta 18026786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 21962095 - 21962062
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||| ||||||||||||||||||||||||    
T  21962095 tccacaattaaattgtgtgagctctagccactag 21962062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 22732357 - 22732320
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  22732357 ctccataatttaattgtgtgagctccagccactagact 22732320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 29154874 - 29154918
Alignment:
Q  262 tgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||    
T  29154874 tgcatattatatgtaggagccgg-gttcgaaccccggacactccac 29154918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 34389604 - 34389567
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  34389604 ctccacaattaaattgtgtgagctcaagccactagact 34389567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 35241474 - 35241511
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||| | |||||||||||||    
T  35241474 ctccacaatttaattgtgtgagttttagccactagact 35241511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 36124478 - 36124515
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  36124478 ctccacaatttaactgtgtgagctctaaccactagact 36124515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 36888386 - 36888353
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  36888386 ctccacaattaaattgtgtgagctctagccacta 36888353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 25729431 - 25729399
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||| ||||||||||||||||||||||    
T  25729431 ctccacaattaaattgtgtgagctctagccact 25729399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 336
Target Start/End: Original strand, 28308319 - 28308347
Alignment:
Q  308 aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||    
T  28308319 aatttaattgtgtgagctctagccactag 28308347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 293
Target Start/End: Complemental strand, 31700424 - 31700392
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaac 293  Q
    ||||||||||||||||||||| |||||||||||    
T  31700424 ttgcatattatatgtaggagctggagtttgaac 31700392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 336
Target Start/End: Original strand, 36735957 - 36735985
Alignment:
Q  308 aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||    
T  36735957 aatttaattgtgtgagctctagccactag 36735985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 37034838 - 37034882
Alignment:
Q  263 gcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||| ||||||| ||||||||||||| |||||||| |||||||||    
T  37034838 gcattttatatgcaggagccggagttcgaaccccggacactccac 37034882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 21388553 - 21388627
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  21388553 ttgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtgtgagctctagccacta 21388627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 48288441 - 48288363
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||  ||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||    
T  48288441 ttgcatattatatgcaggagccgaggttcgaatcccggacactccacaattaaattgtgtgagctctagccactagact 48288363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 47255122 - 47255047
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||| || ||||||||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  47255122 ttgcatattatctgcaggagccggggttcgaaccccggacacttcacaattaaattgtgtgagctctagccactag 47255047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 10244929 - 10244846
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacac--------tccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||| ||| |||||||| ||||        ||||||||| ||||||||||||||||||||||||    
T  10244929 ttgcatattatatgtaggagccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactag 10244846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 32619380 - 32619463
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  32619380 ttgcatattatatgtaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 32619463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 24061369 - 24061283
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| |||||||||||||||||||||||||||    
T  24061369 ttgcatattatatgcaggagccggggttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccactagact 24061283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 36174420 - 36174506
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| |||||||||||||||||||||||||||    
T  36174420 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttttccacaattaaattgtgtgagctctagccactagact 36174506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 13720800 - 13720883
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||||||    
T  13720800 ttgcatattatatgcaggggccggggttcgaaccccgaacactccacttctccaaaatttaattgtgtgagctctagccactag 13720883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 15238919 - 15239002
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||||||    
T  15238919 ttgcatattatatgcaggggccggggttcgaaccccggacactccacttctccataatttaattgtgtgagctctagccactag 15239002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 19331491 - 19331457
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  19331491 ctccacaatttaattgtgtgagctctagccactag 19331457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 26801769 - 26801686
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactc--------cacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||        ||||||| ||||||||||||||||||||||||    
T  26801769 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttcttcacaattaaattgtgtgagctctagccactag 26801686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 27510297 - 27510214
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca--------caatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| || ||||||||||||||        ||||| ||||||||||||||||||||||||    
T  27510297 ttgcatattatatgcaggagccggggttcgatccccgtacactccatttctccacaattaaattgtgtgagctctagccactag 27510214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 29617435 - 29617518
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  29617435 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 29617518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 31026249 - 31026332
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  31026249 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 31026332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 48119549 - 48119583
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  48119549 ctccacaatttaattgtgtgagctctagccactag 48119583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 48719878 - 48719912
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  48719878 ctccacaatttaattgtgtgagctctagccactag 48719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 3529859 - 3529896
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3529859 ctccacaattaaattgtgtgagctctagccactagact 3529896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 5804934 - 5804967
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||||||||||||||||||||||||||||||    
T  5804934 ctccacaatttaattgtgtgagctctagccacta 5804967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 7401378 - 7401341
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7401378 ctccacaattaaattgtgtgagctctagccactagact 7401341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 29281333 - 29281296
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  29281333 ctccacaattaaattgtgtgagctctagccactagact 29281296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 31077894 - 31077857
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  31077894 ctccacaattaaattgtgtgagctctagccactagact 31077857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 32676982 - 32676900
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  32676982 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 32676900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 46534788 - 46534702
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||| ||||| |||||||| |||        |||||||||| |||||||||||||||||||| ||||||    
T  46534788 ttgcatattatatgcaggagcctgagttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccattagact 46534702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 336
Target Start/End: Complemental strand, 9697879 - 9697848
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||||||||||||||    
T  9697879 cacaatttaattgtgtgagctctagccactag 9697848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 13730137 - 13730055
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca------ca-atttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||      || ||||||||||||||||||||| ||||||    
T  13730137 ttgcatattatatgcaggggccggggtttgaaccccggacactccatttctccatatttaattgtgtgagctctagtcactag 13730055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 334
Target Start/End: Original strand, 36622253 - 36622284
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccact 334  Q
    ||||||||||||||||||||||||||||||||    
T  36622253 tccacaatttaattgtgtgagctctagccact 36622284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 48269377 - 48269342
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactaga 337  Q
    |||||||||| |||||||||||||||||||||||||    
T  48269377 ctccacaattaaattgtgtgagctctagccactaga 48269342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 3062853 - 3062887
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  3062853 ctccacaattaaattgtgtgagctctagccactag 3062887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 3766841 - 3766887
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  3766841 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 3766887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 4960863 - 4960897
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  4960863 ctccacaattaaattgtgtgagctctagccactag 4960897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7525523 - 7525557
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  7525523 ctccacaattaaattgtgtgagctctagccactag 7525557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7691950 - 7691984
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||| ||||||    
T  7691950 ctccacaatttaattgtgtgagctctagtcactag 7691984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 8174195 - 8174229
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  8174195 ctccacaattaaattgtgtgagctctagccactag 8174229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 11453673 - 11453639
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  11453673 ctccacaattaaattgtgtgagctctagccactag 11453639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 12640580 - 12640546
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  12640580 ctccacaattaaattgtgtgagctctagccactag 12640546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 19752959 - 19752925
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  19752959 ctccacaatttaattgtgtgagttctagccactag 19752925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 21762883 - 21762849
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  21762883 ctccacaattaaattgtgtgagctctagccactag 21762849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 24508905 - 24508939
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  24508905 ctccacaattaaattgtgtgagctctagccactag 24508939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 24692505 - 24692551
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    ||||||||| |||| ||||| |||||||||||||||| |||||||||    
T  24692505 ttgcatattctatgcaggagtcggagtttgaaccccggacactccac 24692551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 24781109 - 24781143
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  24781109 ctccacaattaaattgtgtgagctctagccactag 24781143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 25318576 - 25318530
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||| ||||||||||||||||| ||| |||||||| |||||||||    
T  25318576 ttgcattttatatgtaggagccggggttcgaaccccgaacactccac 25318530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 25833634 - 25833668
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||| |||||||||||||||    
T  25833634 ctccacaatttaattgtgtaagctctagccactag 25833668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 28547772 - 28547738
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  28547772 ctccacaattaaattgtgtgagctctagccactag 28547738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 30388498 - 30388464
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  30388498 ctccacaattaaattgtgtgagctctagccactag 30388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 32047168 - 32047202
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  32047168 ctccacaattaaattgtgtgagctctagccactag 32047202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 32856908 - 32856874
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||| |||||||||||||||||||    
T  32856908 ctccacaatttaattatgtgagctctagccactag 32856874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 35645678 - 35645712
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  35645678 ctccacaattaaattgtgtgagctctagccactag 35645712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 35950207 - 35950241
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  35950207 ctccacaattaaattgtgtgagctctagccactag 35950241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 37300139 - 37300105
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccc 295  Q
    |||||||||||||||||| ||||||||||||||||    
T  37300139 ttgcatattatatgtaggggccggagtttgaaccc 37300105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Original strand, 38151429 - 38151459
Alignment:
Q  309 atttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||||    
T  38151429 atttaattgtgtgagctctagccactagact 38151459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 38889484 - 38889450
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||||||||| |||||||    
T  38889484 ctccacaatttaattgtgtgagctctatccactag 38889450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 43119423 - 43119389
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  43119423 ctccacaattaaattgtgtgagctctagccactag 43119389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 43633081 - 43633047
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  43633081 ctccacaattaaattgtgtgagctctagccactag 43633047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 2229054 - 2229091
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  2229054 ctccacaattaaattgtgtgagctctagccattagact 2229091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 3532661 - 3532694
Alignment:
Q  306 acaatttaattgtgtgagctctagccactagact 339  Q
    |||||| |||||||||||||||||||||||||||    
T  3532661 acaattaaattgtgtgagctctagccactagact 3532694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 5990137 - 5990104
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||||||||||||| |||||||||    
T  5990137 ctccacaatttaattgtgtgagctttagccacta 5990104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 12615830 - 12615867
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  12615830 ctccacaattaaattgtgtgagctctaaccactagact 12615867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 15074894 - 15074857
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  15074894 ctccacaattaaattatgtgagctctagccactagact 15074857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 24732542 - 24732505
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  24732542 ctccacaattaaattgtgtgagctctagccattagact 24732505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 30940850 - 30940887
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  30940850 ctccacaatttaattgtttgaactctagccactagact 30940887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 42182189 - 42182152
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  42182189 ctccacaatttaattgtatgagctctagtcactagact 42182152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 44616681 - 44616718
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  44616681 ctccacaattaaattgtgtgagctctaaccactagact 44616718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 36391895 - 36391863
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||| ||||||||||||||||||||||    
T  36391895 ctccacaattaaattgtgtgagctctagccact 36391863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 9661580 - 9661655
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||    
T  9661580 ttgcatattatatgtaagagtcggagttcgaaccccggacactccacaattaaattgtatgagctctagccactag 9661655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 14944493 - 14944569
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactaga 337  Q
    |||||||||||||  |||||  |  |||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  14944493 ttgcatattatatacaggagttgaggtttgaaccctggacactccacaatttaattgtgtgagttctagccactaga 14944569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 44602515 - 44602590
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||| ||||||| ||| ||||| ||| |||||||   ||||||||||||||||||||||||||||| |||||||    
T  44602515 ttgcattttatatgcaggggccggggttcgaaccccagccactccacaatttaattgtgtgagctctacccactag 44602590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 47934063 - 47934026
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47934063 ctccacaatttaattgtgtgagctctagccactagact 47934026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 4700929 - 4700895
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  4700929 ctccacaatttaattgtgtgagctctagccactag 4700895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 6371144 - 6371227
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactc--------cacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||        ||||||| ||||||||||||||||||||||||    
T  6371144 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttcttcacaattaaattgtgtgagctctagccactag 6371227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 12582068 - 12581985
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  12582068 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 12581985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 31852604 - 31852570
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  31852604 ctccacaatttaattgtgtgagctctagccactag 31852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 37935940 - 37935974
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  37935940 ctccacaatttaattgtgtgagctctagccactag 37935974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 43147424 - 43147341
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  43147424 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 43147341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 43596925 - 43597008
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  43596925 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 43597008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 46775070 - 46774987
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  46775070 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 46774987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 48569167 - 48569133
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  48569167 ctccacaatttaattgtgtgagctctagccactag 48569133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 49447151 - 49447234
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||| ||| |||||| | |||        |||||||||||||||||||| ||||||||||||||    
T  49447151 ttgcatattatatgtaggagccggggttcgaaccctggacactccacttctccacaatttaattgtgtgggctctagccactag 49447234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 52731479 - 52731396
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacact--------ccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||        |||||||| ||||||||||||||||||||||||    
T  52731479 ttgcatattatatgcaggagccggggttcgaaccccggacacttcacttctccacaattaaattgtgtgagctctagccactag 52731396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 3763999 - 3763966
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||||||||||||||||||||||||||||||    
T  3763999 ctccacaatttaattgtgtgagctctagccacta 3763966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 10417212 - 10417175
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  10417212 ctccacaattaaattgtgtgagctctagccactagact 10417175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 16342026 - 16342063
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  16342026 ctccacaatttaattgtgtgagctctaaccactagact 16342063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 22788665 - 22788628
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22788665 ctccacaatttaattgtgtgagcactagccactagact 22788628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 39696329 - 39696292
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  39696329 ctccacaattaaattgtgtgagctctagccactagact 39696292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 55021633 - 55021670
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  55021633 ctccacaattaaattgtgtgagctctagccactagact 55021670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 336
Target Start/End: Complemental strand, 13564256 - 13564225
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||||||||||||||    
T  13564256 cacaatttaattgtgtgagctctagccactag 13564225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 55251391 - 55251311
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccac 333  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||    
T  55251391 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccac 55251311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 637129 - 637175
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  637129 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 637175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 1458058 - 1458012
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  1458058 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 1458012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 2222618 - 2222652
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  2222618 ctccacaattaaattgtgtgagctctagccactag 2222652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 3036046 - 3036012
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  3036046 ctccacaattaaattgtgtgagctctagccactag 3036012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 4590325 - 4590359
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  4590325 ctccacaatttaattgtgtgagctttagccactag 4590359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 5179922 - 5179876
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  5179922 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 5179876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 5305001 - 5304967
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  5305001 ctccacaattaaattgtgtgagctctagccactag 5304967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 10141062 - 10141096
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10141062 ctccacaattaaattgtgtgagctctagccactag 10141096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 10402520 - 10402554
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10402520 ctccacaattaaattgtgtgagctctagccactag 10402554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 10407020 - 10406986
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10407020 ctccacaattaaattgtgtgagctctagccactag 10406986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 13264262 - 13264228
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||| |||||||||||||||||||||||||||    
T  13264262 cacaattaaattgtgtgagctctagccactagact 13264228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 22230474 - 22230428
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  22230474 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 22230428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 35948174 - 35948140
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  35948174 ctccacaattaaattgtgtgagctctagccactag 35948140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 40051701 - 40051735
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  40051701 ctccacaattaaattgtgtgagctctagccactag 40051735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 40994094 - 40994060
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  40994094 ctccacaattaaattgtgtgagctctagccactag 40994060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 42218829 - 42218863
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  42218829 ctccacaatttaattgtgtgagctttagccactag 42218863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 42231542 - 42231588
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  42231542 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 42231588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Original strand, 42664066 - 42664096
Alignment:
Q  309 atttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||||    
T  42664066 atttaattgtgtgagctctagccactagact 42664096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 45112151 - 45112105
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  45112151 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 45112105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 45126211 - 45126245
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  45126211 ctccacaatttaattgtgtgagctttagccactag 45126245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 45849126 - 45849160
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  45849126 ctccacaatttaattgtgtgagttctagccactag 45849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 46105565 - 46105611
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  46105565 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 46105611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 48744286 - 48744320
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  48744286 ctccacaatttaattgtgtgagttctagccactag 48744320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Original strand, 48949708 - 48949738
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagcca 332  Q
    |||||||||||||||||||||||||||||||    
T  48949708 ctccacaatttaattgtgtgagctctagcca 48949738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 48950863 - 48950897
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  48950863 ctccacaattaaattgtgtgagctctagccactag 48950897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 49056805 - 49056851
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||||||| |||||||| |||| ||||    
T  49056805 ttgcatattatatgcaggagccggagttcgaaccccggacaccccac 49056851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 49757275 - 49757241
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  49757275 ctccacaattaaattgtgtgagctctagccactag 49757241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 49901561 - 49901595
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  49901561 ctccacaattaaattgtgtgagctctagccactag 49901595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Complemental strand, 51759644 - 51759614
Alignment:
Q  309 atttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||||    
T  51759644 atttaattgtgtgagctctagccactagact 51759614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 53634242 - 53634208
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  53634242 ctccacaattaaattgtgtgagctctagccactag 53634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 55536458 - 55536492
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  55536458 ctccacaattaaattgtgtgagctctagccactag 55536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 4234325 - 4234239
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| ||| ||||| || |||||||||        |||| |||||||||||||||||||| ||||||    
T  4234325 ttgcatattatatgcaggagccggggttcgaacctcggacactccacttttccacaattaaattgtgtgagctctagccattagact 4234239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 8433614 - 8433581
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  8433614 ctccacaattaaattgtgtgagctctagccacta 8433581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 8564250 - 8564287
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  8564250 ctccacattttaattgtgtgagctctagccactggact 8564287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 9761194 - 9761231
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  9761194 ctccacaattaaattgtgtgagctctaaccactagact 9761231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 12267597 - 12267634
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  12267597 ctccacaatataattgtgtgagctctaaccactagact 12267634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 12504634 - 12504597
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  12504634 ctccacaattaaattgtgtgagctctagccattagact 12504597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 15208601 - 15208638
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  15208601 ctccacaattaaattgtgtgagctctagccaatagact 15208638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 21935556 - 21935593
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  21935556 ctccacaattaaattgtgtgagctttagccactagact 21935593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 29771290 - 29771257
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||||||||||||| ||||||||||||||||    
T  29771290 ctccacaatttaattgtttgagctctagccacta 29771257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 31016414 - 31016447
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  31016414 ctccacaattgaattgtgtgagctctagccacta 31016447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 33325508 - 33325541
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  33325508 ctccacaattaaattgtgtgagctctagccacta 33325541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 37251192 - 37251229
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  37251192 ctccacaattaaattgtgtgaactctagccactagact 37251229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 41854212 - 41854249
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  41854212 ctccacaattaaattgtgtgagctccagccactagact 41854249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 42395306 - 42395343
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  42395306 ctccacaattaaattgtgtgagctttagccactagact 42395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 46582713 - 46582750
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  46582713 ctccacaatttaattgtgtgagttctggccactagact 46582750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 46998359 - 46998322
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  46998359 ctccacaattaaattgtgtgagctctagccattagact 46998322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 48825810 - 48825773
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  48825810 ctccacaattaaattgtgtgagctctaaccactagact 48825773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 52798356 - 52798393
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||| || ||||||    
T  52798356 ctccacaatttaattgtgtgagctctagtcattagact 52798393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 56087945 - 56087908
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  56087945 ctccacaattaaattgtgtgagttctagccactagact 56087908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 194667 - 194635
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||||||||||||||||| |||||||||||    
T  194667 tccacaatttaattgtgtgagttctagccacta 194635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 17709494 - 17709454
Alignment:
Q  267 attatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||| ||||||||| |||||||| |||||||||    
T  17709494 attatatgtaggggccggagttcgaaccccggacactccac 17709454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 330
Target Start/End: Complemental strand, 27434141 - 27434113
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagc 330  Q
    |||||||||||||||||||||||||||||    
T  27434141 ctccacaatttaattgtgtgagctctagc 27434113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 42916822 - 42916790
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    ||||||| |||||||||||||||||||||||||    
T  42916822 ctccacagtttaattgtgtgagctctagccact 42916790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 19612745 - 19612816
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagcca 332  Q
    ||||||||||||||||||||| || ||| |||||||  ||||||||||||||||||||||||||||||||||    
T  19612745 ttgcatattatatgtaggagctggggttcgaaccccagacactccacaatttaattgtgtgagctctagcca 19612816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 37063550 - 37063628
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||| ||| | ||| |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  37063550 ttgcatattatatgcaggggccagggttcgaactccggacactccacaatttaattgtgtgagctctagccactagact 37063628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 38387693 - 38387768
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||| || || ||| |||||||  ||||||||||||||||||||||||||||||||||||||    
T  38387693 ttgcatattatatgcaggggctggggttcgaaccccagacactccacaatttaattgtgtgagctctagccactag 38387768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 40931166 - 40931241
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca-ctccacaatttaattgtgtgagctctagccactaga 337  Q
    ||||||||||||||||||  ||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||    
T  40931166 ttgcatattatatgtagggaccggagtttgaacccc--acttctccacaatttaattgtgtgagctctagccactaga 40931241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 41187338 - 41187375
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41187338 ctccacaatttaattgtgtgagctctagccactagact 41187375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 9937530 - 9937486
Alignment:
Q  291 aaccccgtacactccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  9937530 aaccccgaacactccacaatttaattgtgtgagctctaaccacta 9937486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 4562792 - 4562709
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  4562792 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 4562709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 20296448 - 20296531
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  20296448 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 20296531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 29772269 - 29772235
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  29772269 ctccacaatttaattgtgtgagctctagccactag 29772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 30390409 - 30390326
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacac--------tccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||        |||||||||||||||||||||||||| |||||||    
T  30390409 ttgcatattatatgcaggagccggggttcgaaccccggacaccctacttctccacaatttaattgtgtgagctctaaccactag 30390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 41509546 - 41509629
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  41509546 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 41509629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 41566841 - 41566875
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  41566841 ctccacaatttaattgtgtgagctctagccactag 41566875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 2643727 - 2643809
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  2643727 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 2643809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 3439027 - 3439064
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3439027 ctccacaattaaattgtgtgagctctagccactagact 3439064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 16754762 - 16754799
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||| |||||||||||||||||||    
T  16754762 ctccacaatttaattgtgagagctctagccactagact 16754799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 28153133 - 28153096
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  28153133 ctccacaattaaattgtgtgagctctagccactagact 28153096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 37486924 - 37486887
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  37486924 ctccacaattaaattgtgtgagctctagccactagact 37486887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 38179285 - 38179217
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctag 329  Q
    |||||| ||||||| ||| || || ||| ||||| || ||||||||||||| |||||||||||||||||    
T  38179285 ttgcattttatatgcaggggctggggttcgaacctcggacactccacaattaaattgtgtgagctctag 38179217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 3287096 - 3287011
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccaca-------atttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||| ||||| ||| |||||||| | |||||||        |||||||||||||||||||||||||||||||    
T  3287096 ttgcatattatatgcaggggccggggttcgaaccccggatactccacttctccacatttaattgtgtgagctctagccactagact 3287011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 1260263 - 1260297
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  1260263 ctccacaattaaattgtgtgagctctagccactag 1260297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 1309117 - 1309083
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  1309117 ctccacaattaaattgtgtgagctctagccactag 1309083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 1844896 - 1844930
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  1844896 ctccacaattaaattgtgtgagctctagccactag 1844930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 5613033 - 5613067
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||||||||| |||||||    
T  5613033 ctccacaatttaattgtgtgagctctaaccactag 5613067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 6331640 - 6331674
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  6331640 ctccacaattaaattgtgtgagctctagccactag 6331674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 8742812 - 8742778
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||| ||||||||||||||||    
T  8742812 cacaatttaattgtgtgaactctagccactagact 8742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 16385033 - 16384999
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  16385033 ctccacaattaaattgtgtgagctctagccactag 16384999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 17499028 - 17499062
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  17499028 ctccacaattaaattgtgtgagctctagccactag 17499062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 18278408 - 18278374
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  18278408 ctccacaattaaattgtgtgagctctagccactag 18278374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 18694864 - 18694898
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  18694864 ctccacaattaaattgtgtgagctctagccactag 18694898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 28194711 - 28194745
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  28194711 ctccacaattaaattgtgtgagctctagccactag 28194745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Complemental strand, 28692476 - 28692446
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagcca 332  Q
    |||||||||||||||||||||||||||||||    
T  28692476 ctccacaatttaattgtgtgagctctagcca 28692446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 30849808 - 30849766
Alignment:
Q  265 atattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| |||||||||||||||||  |||||||||    
T  30849808 atattatatgtaggggccggagtttgaaccccaaacactccac 30849766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 33228924 - 33228890
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  33228924 ctccacaattaaattgtgtgagctctagccactag 33228890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 34614058 - 34614092
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  34614058 ctccacaattaaattgtgtgagctctagccactag 34614092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 38400393 - 38400427
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  38400393 ctccacaattaaattgtgtgagctctagccactag 38400427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 40473541 - 40473507
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  40473541 ctccacaattaaattgtgtgagctctagccactag 40473507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 40535440 - 40535406
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  40535440 ctccacaattaaattgtgtgagctctagccactag 40535406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 5474986 - 5475019
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  5474986 ctccacaattcaattgtgtgagctctagccacta 5475019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 5521210 - 5521177
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||| ||||||||||||    
T  5521210 tccacaatttaattgtgtgagttctagccactag 5521177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 20972884 - 20972843
Alignment:
Q  266 tattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    ||||||||| ||||||||||||| |||||||| |||||||||    
T  20972884 tattatatgcaggagccggagttcgaaccccgaacactccac 20972843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 22653635 - 22653598
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  22653635 ctccacaattaaattgtatgagctctagccactagact 22653598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 29449527 - 29449564
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  29449527 ctccacaattaaattgtgtgagctctagccattagact 29449564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 30932437 - 30932400
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30932437 ctccacaattaaattgtatgagctctagccactagact 30932400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 39408681 - 39408648
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  39408681 ctccacaattaaattgtgtgagctctagccacta 39408648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 43895996 - 43896029
Alignment:
Q  306 acaatttaattgtgtgagctctagccactagact 339  Q
    |||||| |||||||||||||||||||||||||||    
T  43895996 acaattaaattgtgtgagctctagccactagact 43896029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 44186522 - 44186559
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  44186522 ctccacaattaaattgtgtgagctctagccaccagact 44186559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 44948679 - 44948712
Alignment:
Q  306 acaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||| |||||||||||||||    
T  44948679 acaatttaattgtgtgagttctagccactagact 44948712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 13975208 - 13975240
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactaga 337  Q
    ||||||| |||||||||||||||||||||||||    
T  13975208 cacaattaaattgtgtgagctctagccactaga 13975240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 330
Target Start/End: Original strand, 14215961 - 14215989
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagc 330  Q
    |||||||||||||||||||||||||||||    
T  14215961 ctccacaatttaattgtgtgagctctagc 14215989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 293
Target Start/End: Complemental strand, 36072634 - 36072606
Alignment:
Q  265 atattatatgtaggagccggagtttgaac 293  Q
    |||||||||||||||||||||||||||||    
T  36072634 atattatatgtaggagccggagtttgaac 36072606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 46021919 - 46021844
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||||||| |||||| |||||||||||||||||    
T  46021919 ttgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtatgagctctagccactag 46021844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 3269649 - 3269724
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||| || || ||| |||||| | ||| ||||||||||||||||||||| ||||||||||||    
T  3269649 ttgcatattatatgcaggggctggggttcgaaccctggacagtccacaatttaattgtgtgagttctagccactag 3269724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 3560372 - 3560335
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3560372 ctccacaatttaattgtgtgagctctagccactagact 3560335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 1570232 - 1570149
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  1570232 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 1570149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 4482638 - 4482555
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||||||| |||||||| | |||||||        |||| ||||||||||||||||||||||||    
T  4482638 ttgcatattatatgcaggagccggagttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccactag 4482555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 6438104 - 6438021
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  6438104 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 6438021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 7166218 - 7166184
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  7166218 ctccacaatttaattgtgtgagctctagccactag 7166184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 11215080 - 11215114
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  11215080 ctccacaatttaattgtgtgagctctagccactag 11215114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 15819641 - 15819558
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  15819641 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 15819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 18467189 - 18467155
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  18467189 ctccacaatttaattgtgtgagctctagccactag 18467155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 18534031 - 18534114
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||| ||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  18534031 ttgcatattatatgtaggagtcggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 18534114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 19011434 - 19011468
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  19011434 ctccacaatttaattgtgtgagctctagccactag 19011468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 22563465 - 22563499
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  22563465 ctccacaatttaattgtgtgagctctagccactag 22563499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 45333703 - 45333669
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  45333703 ctccacaatttaattgtgtgagctctagccactag 45333669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 45517259 - 45517225
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  45517259 ctccacaatttaattgtgtgagctctagccactag 45517225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 46965770 - 46965853
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  46965770 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccataattaaattgtgtgagctctagccactag 46965853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 51050269 - 51050303
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  51050269 ctccacaatttaattgtgtgagctctagccactag 51050303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 16343058 - 16343140
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  16343058 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 16343140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 27642718 - 27642681
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  27642718 ctccacaattaaattgtgtgagctctagccactagact 27642681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 29188715 - 29188752
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  29188715 ctccacaattaaattgtgtgagctctagccactagact 29188752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 1836571 - 1836611
Alignment:
Q  299 acactccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  1836571 acactccacaatttaattgtgtgagttttagccactagact 1836611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 9866174 - 9866138
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||| |||||||||||||||||||||||||||    
T  9866174 tccacaattaaattgtgtgagctctagccactagact 9866138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 51942373 - 51942405
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||||||||||||||||||||||||||    
T  51942373 ctccacaatttaattgtgtgagctctagccact 51942405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 25999929 - 25999964
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactaga 337  Q
    |||||||||| |||||||||||||||||||||||||    
T  25999929 ctccacaattaaattgtgtgagctctagccactaga 25999964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 2277833 - 2277867
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  2277833 ctccacaattaaattgtgtgagctctagccactag 2277867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7191111 - 7191145
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  7191111 ctccacaattaaattgtgtgagctctagccactag 7191145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 8984497 - 8984463
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  8984497 ctccacaattaaattgtgtgagctctagccactag 8984463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 12048115 - 12048081
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  12048115 ctccacaattaaattgtgtgagctctagccactag 12048081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 12502245 - 12502211
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  12502245 ctccacaattaaattgtgtgagctctagccactag 12502211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 12650375 - 12650341
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  12650375 ctccacaattaaattgtgtgagctctagccactag 12650341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 13773247 - 13773281
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  13773247 ctccacaattaaattgtgtgagctctagccactag 13773281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 15390299 - 15390333
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  15390299 ctccacaatttaattgtgtgagttctagccactag 15390333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 16526217 - 16526171
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||| | ||| ||||||||||||||||||    
T  16526217 ttgcatattatatgcaggagcctgtgttcgaaccccgtacactccac 16526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 18551673 - 18551627
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||| ||||| |||||||||||| |||||||||    
T  18551673 ttgcatattatatgcaggggccggggtttgaaccccgaacactccac 18551627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 21265735 - 21265769
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  21265735 ctccacaattaaattgtgtgagctctagccactag 21265769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 27818647 - 27818681
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  27818647 ctccacaattaaattgtgtgagctctagccactag 27818681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 28564336 - 28564302
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  28564336 ctccacaattaaattgtgtgagctctagccactag 28564302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 32594330 - 32594364
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  32594330 ctccacaattaaattgtgtgagctctagccactag 32594364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 32970792 - 32970758
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  32970792 ctccacaattaaattgtgtgagctctagccactag 32970758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Original strand, 33736853 - 33736883
Alignment:
Q  309 atttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||||    
T  33736853 atttaattgtgtgagctctagccactagact 33736883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 40519534 - 40519500
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  40519534 ctccacaattaaattgtgtgagctctagccactag 40519500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 42458194 - 42458160
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||| |||||||||||||    
T  42458194 ctccacaatttaattgtgtgaactctagccactag 42458160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 50899550 - 50899504
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  50899550 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 50899504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 2754439 - 2754472
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  2754439 ctccacaattaaattgtgtgagctctagccacta 2754472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 3694907 - 3694870
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  3694907 ctccacaatttaattgtgcgagctctagccaccagact 3694870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 13538437 - 13538404
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||||||||||| |||||||||||    
T  13538437 ctccacaatttaattgtgtgagttctagccacta 13538404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 16313697 - 16313660
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  16313697 ctccacaattaaattgtgggagctctagccactagact 16313660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 33218880 - 33218843
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  33218880 ctccacaatttaattgtgtaagctctagtcactagact 33218843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 35283580 - 35283613
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||||||||||||||||||||||| ||||||    
T  35283580 ctccacaatttaattgtgtgagctctaaccacta 35283613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 36726640 - 36726677
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  36726640 ctccacaattaaattgtgtgagctctaaccactagact 36726677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 43884873 - 43884910
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  43884873 ctccacaattaaattgtgtgagttctagccactagact 43884910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 44732712 - 44732749
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  44732712 ctccacaattaaattgtgtgaactctagccactagact 44732749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 46225457 - 46225494
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  46225457 ctccacaattaaattgtgtgagctctagccattagact 46225494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 47642973 - 47642940
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  47642973 ctccacaattaaattgtgtgagctctagccacta 47642940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 52369676 - 52369713
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  52369676 ctccataattaaattgtgtgagctctagccactagact 52369713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 21401424 - 21401388
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagac 338  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  21401424 ctccacaattaaattgtgtgagctttagccactagac 21401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 34656386 - 34656354
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||| ||||||||||||||||||||||    
T  34656386 ctccacaattaaattgtgtgagctctagccact 34656354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 336
Target Start/End: Original strand, 48643704 - 48643736
Alignment:
Q  304 ccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||| ||||||||||||||||||||||||    
T  48643704 ccacaattaaattgtgtgagctctagccactag 48643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 336
Target Start/End: Complemental strand, 50899488 - 50899460
Alignment:
Q  308 aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||    
T  50899488 aatttaattgtgtgagctctagccactag 50899460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 266737 - 266662
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| ||| |||  ||||||||||||| ||||||||||||||||||||||||    
T  266737 ttgcatattatatgcaggagccggggttcgaaacccagacactccacaattaaattgtgtgagctctagccactag 266662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 9e-18; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 894672 - 894594
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||| | ||  ||| |||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  894672 ttgcatattatatgcaggggtcgaggttcgaaccccggacactccacaatttaattgtgtgagctctagccactggact 894594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 4408388 - 4408463
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||| || || ||| ||||| |  ||||||||||||||||||||||||||||| ||||||||    
T  4408388 ttgcatattatatgcaggggctggggttcgaaccacagacactccacaatttaattgtgtgagctctggccactag 4408463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 3640593 - 3640630
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3640593 ctccacaatttaattgtgtgagctctagccactagact 3640630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 26347483 - 26347520
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26347483 ctccacaatttaattgtgtgagctctagccactagact 26347520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 31802083 - 31802169
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| |||||||||||||||||||||||||||    
T  31802083 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagact 31802169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 3795765 - 3795731
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  3795765 ctccacaatttaattgtgtgagctctagccactag 3795731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 7207874 - 7207957
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca--------caatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||        ||||| ||||||||||||||||||||||||    
T  7207874 ttgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagctctagccactag 7207957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7425445 - 7425479
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  7425445 ctccacaatttaattgtgtgagctctagccactag 7425479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 17441879 - 17441796
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  17441879 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 17441796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 19953868 - 19953785
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  19953868 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 19953785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 27218914 - 27218997
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||||||  || |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  27218914 ttgcatattatatgtaggagccgggattcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 27218997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 32166448 - 32166482
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  32166448 ctccacaatttaattgtgtgagctctagccactag 32166482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 32611594 - 32611511
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  32611594 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 32611511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 2426143 - 2426180
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  2426143 ctccacaatttaattgtgtgagctctagccaatagact 2426180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 3012714 - 3012677
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  3012714 ctccacaatttaattgtgtgagctctagccattagact 3012677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 7545408 - 7545445
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7545408 ctccacaattaaattgtgtgagctctagccactagact 7545445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 8857123 - 8857196
Alignment:
Q  264 catattatatgtaggagccggagtttgaaccccgtaca-ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||| ||| ||||| ||| |||||||  ||  |||||||||| ||||||||||||||||||||||||    
T  8857123 catattatatgcaggggccggggttcgaaccccccacttctccacaattaaattgtgtgagctctagccactag 8857196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 12284200 - 12284237
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  12284200 ctccacaattaaattgtgtgagctctagccactagact 12284237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 22997415 - 22997452
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  22997415 ctccacaattaaattgtgtgagctctagccactagact 22997452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 23790986 - 23790949
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  23790986 ctccacaattaaattgtgtgagctctagccactagact 23790949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 31803586 - 31803549
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  31803586 ctccacaattaaattgtgtgagctctagccactagact 31803549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 336
Target Start/End: Original strand, 20729033 - 20729064
Alignment:
Q  305 cacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||||||||||||||    
T  20729033 cacaatttaattgtgtgagctctagccactag 20729064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 2816969 - 2817003
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  2816969 ctccacaattaaattgtgtgagctctagccactag 2817003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 3794164 - 3794130
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  3794164 ctccacaattaaattgtgtgagctctagccactag 3794130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 5052065 - 5052031
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  5052065 ctccacaattaaattgtgtgagctctagccactag 5052031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 7328638 - 7328604
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  7328638 ctccacaattaaattgtgtgagctctagccactag 7328604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7414403 - 7414437
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  7414403 ctccacaatttaattgtgtgagctatagccactag 7414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7581123 - 7581157
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  7581123 ctccacaattaaattgtgtgagctctagccactag 7581157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Original strand, 9435705 - 9435735
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagcca 332  Q
    |||||||||||||||||||||||||||||||    
T  9435705 ctccacaatttaattgtgtgagctctagcca 9435735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 9704495 - 9704529
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  9704495 ctccacaattaaattgtgtgagctctagccactag 9704529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 10517278 - 10517312
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10517278 ctccacaattaaattgtgtgagctctagccactag 10517312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 10934629 - 10934675
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  10934629 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 10934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 13116615 - 13116581
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  13116615 ctccacaattaaattgtgtgagctctagccactag 13116581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 15963934 - 15963900
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  15963934 ctccacaatttaattgtgtgagttctagccactag 15963900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 19892267 - 19892233
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||| ||||||||||||||||    
T  19892267 ctccacaatttaattgtgagagctctagccactag 19892233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 28148724 - 28148690
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  28148724 ctccacaattaaattgtgtgagctctagccactag 28148690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 30885561 - 30885527
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||| |||||||||||||    
T  30885561 ctccacaatttaattgtgtgaactctagccactag 30885527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 33573896 - 33573930
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  33573896 ctccacaattaaattgtgtgagctctagccactag 33573930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 33646914 - 33646948
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  33646914 ctccacaattaaattgtgtgagctctagccactag 33646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 743642 - 743679
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  743642 ctccacaattaaattgtgcgagctctagccactagact 743679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 7865346 - 7865313
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||||||||||| |||||||||||    
T  7865346 ctccacaatttaattgtgtgagttctagccacta 7865313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 10913070 - 10913037
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    ||||| ||||||||||||||||||||||||||||    
T  10913070 ctccataatttaattgtgtgagctctagccacta 10913037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 13158700 - 13158667
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  13158700 ctccacaattaaattgtgtgagctctagccacta 13158667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 13163556 - 13163523
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  13163556 ctccacaattaaattgtgtgagctctagccacta 13163523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 20584152 - 20584189
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  20584152 ctccacaattaaattgtgtgagctctagccattagact 20584189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 22574949 - 22574986
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  22574949 ctccacaattaaattgtgtgagctctaaccactagact 22574986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 28842734 - 28842767
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||| ||||||||||||||||||||||||    
T  28842734 tccacaattaaattgtgtgagctctagccactag 28842767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 30916400 - 30916437
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  30916400 ctccacaattaaattgtgtgagctctagccattagact 30916437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 7418357 - 7418389
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    ||||| |||||||||||||||||||||||||||    
T  7418357 ctccataatttaattgtgtgagctctagccact 7418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 24618489 - 24618453
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  24618489 tccacaattaaattgtgtgagttctagccactagact 24618453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 39169799 - 39169865
Alignment:
Q  269 tatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccacta 335  Q
    |||||| ||| ||||| ||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  39169799 tatatgcaggggccggggttcgaaccccgaacactccacaatttaattgtgtgagctctaaccacta 39169865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 6447089 - 6447135
Alignment:
Q  290 gaaccccgtacactccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  6447089 gaaccccggacactccacaatttaattgtgtgaggtctagccactag 6447135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 45871051 - 45871121
Alignment:
Q  265 atattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| ||| | ||| ||| |||||||| |||||| |||||||||||||||||| |||||||||||    
T  45871051 atattatatgcaggggtcggggttcgaaccccggacactctacaatttaattgtgtgagttctagccacta 45871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 38819315 - 38819278
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38819315 ctccacaatttaattgtgtgagctctagccactagact 38819278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 3748593 - 3748559
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  3748593 ctccacaatttaattgtgtgagctctagccactag 3748559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 4139030 - 4139113
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  4139030 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 4139113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 6488203 - 6488237
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  6488203 ctccacaatttaattgtgtgagctctagccactag 6488237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 6920003 - 6919920
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  6920003 ttgcatattatatgcaggagccggggttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccactag 6919920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 17218567 - 17218601
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  17218567 ctccacaatttaattgtgtgagctctagccactag 17218601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 18194368 - 18194451
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  18194368 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 18194451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 19591619 - 19591573
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||    
T  19591619 ttgcatattatatgtaggagccggggttcgaaccccggacactccac 19591573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 21405193 - 21405270
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||| | |||||||||||| || ||| ||| |||| ||||||||||||| |||| ||||||||||| ||||||||||    
T  21405193 ttgcatttaatatgtaggagctggggttcgaatcccg-acactccacaattaaattatgtgagctctaaccactagact 21405270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 22501922 - 22501888
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  22501922 ctccacaatttaattgtgtgagctctagccactag 22501888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 32144614 - 32144697
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacac--------tccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||        ||||||||| ||||||||||||||||||||||||    
T  32144614 ttgcatattatatgcaggagccggggttcgaaccccggacaccccatttctccacaattaaattgtgtgagctctagccactag 32144697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 33606931 - 33606897
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  33606931 ctccacaatttaattgtgtgagctctagccactag 33606897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 34757595 - 34757629
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  34757595 ctccacaatttaattgtgtgagctctagccactag 34757629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 37800651 - 37800568
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  37800651 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 37800568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 40548333 - 40548416
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactcca--------caatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| ||||||||        ||||| ||||||||||||||||||||||||    
T  40548333 ttgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagctctagccactag 40548416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 40933871 - 40933788
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  40933871 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 40933788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 50234154 - 50234237
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||||    
T  50234154 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 50234237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 50496854 - 50496771
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| ||||||||||||||||||||||||    
T  50496854 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 50496771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 3894623 - 3894660
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3894623 ctccacaattaaattgtgtgagctctagccactagact 3894660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 10176943 - 10176861
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  10176943 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 10176861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 11820083 - 11820120
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11820083 ctccacaattaaattgtgtgagctctagccactagact 11820120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 17729070 - 17729107
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  17729070 ctccacaattaaattgtgtgagctctagccactagact 17729107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 19030299 - 19030336
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19030299 ctccacaattaaattgtgtgagctctagccactagact 19030336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 24430228 - 24430265
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24430228 ctccacaattaaattgtgtgagctctagccactagact 24430265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 31327758 - 31327676
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| |||||||||||||||||||||||    
T  31327758 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 31327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 40963702 - 40963665
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40963702 ctccacaatttaattgtgtgagctctagcctctagact 40963665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 49194683 - 49194650
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||||||||||||||||||||||||||||||    
T  49194683 ctccacaatttaattgtgtgagctctagccacta 49194650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 52410232 - 52410195
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  52410232 ctccacaattaaattgtgtgagctctagccactagact 52410195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 54626421 - 54626458
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||||||||||    
T  54626421 ctccacaattaaattgtgtgagctctagccactagact 54626458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 49728728 - 49728796
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctag 329  Q
    |||||| ||||||| | ||||| | ||| ||| |||| ||||||||||||| |||||||||||||||||    
T  49728728 ttgcattttatatgcaagagccagggttcgaatcccggacactccacaattaaattgtgtgagctctag 49728796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 52974093 - 52974012
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||||||| ||||||||| ||| |||||||| |||        |||||||||| ||||||||||||||||||||||    
T  52974093 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccact 52974012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 34898758 - 34898723
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactaga 337  Q
    |||||||||| |||||||||||||||||||||||||    
T  34898758 ctccacaattaaattgtgtgagctctagccactaga 34898723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 2007123 - 2007077
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||| ||| |||||||||||| |||||||||    
T  2007123 ttgcatattatatgcaggagtcggggtttgaaccccggacactccac 2007077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 2523005 - 2523039
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  2523005 ctccacaattaaattgtgtgagctctagccactag 2523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 4541976 - 4542010
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||||| |||||||||||||    
T  4541976 ctccacaatttaattgtgtgaactctagccactag 4542010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7270034 - 7270068
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  7270034 ctccacaattaaattgtgtgagctctagccactag 7270068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 7920399 - 7920433
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  7920399 ctccacaattaaattgtgtgagctctagccactag 7920433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 8964767 - 8964733
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  8964767 ctccacaattaaattgtgtgagctctagccactag 8964733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 10482844 - 10482810
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10482844 ctccacaattaaattgtgtgagctctagccactag 10482810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 13638236 - 13638202
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  13638236 ctccacaatttaattgtgtgagctatagccactag 13638202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 14887309 - 14887343
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||| |||||||||||||||||    
T  14887309 ctccacaatttaattgtatgagctctagccactag 14887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 336
Target Start/End: Original strand, 15299155 - 15299185
Alignment:
Q  306 acaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||    
T  15299155 acaatttaattgtgtgagctctagccactag 15299185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 17608310 - 17608276
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  17608310 ctccacaatttaattgtgtgagttctagccactag 17608276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 20489845 - 20489919
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||| ||| ||||||||| |||||||| |||| | || | |  |||||||||| |||||||||||    
T  20489845 ttgcatattatatgcaggggccggagttcgaaccccggacacccaactactccattgtgtgagttctagccacta 20489919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 27669000 - 27669034
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  27669000 ctccacaattaaattgtgtgagctctagccactag 27669034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 28550304 - 28550270
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  28550304 ctccacaattaaattgtgtgagctctagccactag 28550270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 28689663 - 28689629
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||| ||||||||    
T  28689663 ctccacaatttaattgtgtgagctctggccactag 28689629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 30555218 - 30555184
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  30555218 ctccacaattaaattgtgtgagctctagccactag 30555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 30779558 - 30779524
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  30779558 ctccacaatttaattgtgtgagttctagccactag 30779524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 31327492 - 31327458
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  31327492 ctccacaattaaattgtgtgagctctagccactag 31327458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 33706718 - 33706684
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  33706718 ctccacaattaaattgtgtgagctctagccactag 33706684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 37488451 - 37488417
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  37488451 ctccacaattaaattgtgtgagctctagccactag 37488417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 39720014 - 39720048
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  39720014 ctccacaattaaattgtgtgagctctagccactag 39720048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Complemental strand, 39966065 - 39966035
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagcca 332  Q
    |||||||||||||||||||||||||||||||    
T  39966065 ctccacaatttaattgtgtgagctctagcca 39966035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 41936398 - 41936364
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  41936398 ctccacaattaaattgtgtgagctctagccactag 41936364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 44764561 - 44764527
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||| |||||||||||||||||||||||||||||    
T  44764561 ctccataatttaattgtgtgagctctagccactag 44764527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 45198802 - 45198836
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  45198802 ctccacaattaaattgtgtgagctctagccactag 45198836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 45551800 - 45551766
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  45551800 ctccacaattaaattgtgtgagctctagccactag 45551766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 45701423 - 45701457
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  45701423 ctccacaattaaattgtgtgagctctagccactag 45701457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 48251651 - 48251685
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  48251651 ctccacaattaaattgtgtgagctctagccactag 48251685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 49447168 - 49447214
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  49447168 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 49447214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 50675733 - 50675699
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  50675733 ctccacaattaaattgtgtgagctctagccactag 50675699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 51467266 - 51467300
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  51467266 ctccacaattaaattgtgtgagctctagccactag 51467300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 53432728 - 53432694
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  53432728 ctccacaattaaattgtgtgagctctagccactag 53432694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 53578034 - 53578068
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  53578034 ctccacaattaaattgtgtgagctctagccactag 53578068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 53752691 - 53752657
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||| ||||||||||||    
T  53752691 ctccacaatttaattgtgtgagttctagccactag 53752657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 55008014 - 55007980
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  55008014 ctccacaattaaattgtgtgagctctagccactag 55007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 4860240 - 4860277
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  4860240 ctccacaattaaattgtgtgagctctaaccactagact 4860277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 4880248 - 4880285
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  4880248 ctccacaattaaattgtgtgagctctaaccactagact 4880285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 9220244 - 9220211
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  9220244 ctccacaattaaattgtgtgagctctagccacta 9220211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 15492171 - 15492204
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||| ||||||||||||||||||||||||    
T  15492171 tccacaattaaattgtgtgagctctagccactag 15492204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 16906810 - 16906777
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  16906810 ctccacaattaaattgtgtgagctctagccacta 16906777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 23164144 - 23164111
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  23164144 ctccacaattaaattgtgtgagctctagccacta 23164111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 31316713 - 31316750
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  31316713 ctccacaattaaattgggtgagctctagccactagact 31316750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 32256545 - 32256512
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  32256545 ctccacaattaaattgtgtgagctctagccacta 32256512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 33225339 - 33225306
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  33225339 ctccacaattaaattgtgtgagctctagccacta 33225306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 34579449 - 34579412
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  34579449 ctccacaattaaattgtgtgaactctagccactagact 34579412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 45512986 - 45512949
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  45512986 ctccacaattaaattgtgtgagctctaaccactagact 45512949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 47098811 - 47098844
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  47098811 ctccacaattaaattgtgtgagctctagccacta 47098844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 48739735 - 48739698
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| || ||||||||||||||||||||||||    
T  48739735 ctccacaattaaactgtgtgagctctagccactagact 48739698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 53347281 - 53347248
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||||||||||||||| |||||||    
T  53347281 ctccacaatttaattgtgtgagctctggccacta 53347248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 53906459 - 53906492
Alignment:
Q  303 tccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||| ||||||||||||||||||||||||    
T  53906459 tccacaattaaattgtgtgagctctagccactag 53906492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 17472321 - 17472289
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||| ||||||||||||||||||||||    
T  17472321 ctccacaattaaattgtgtgagctctagccact 17472289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 19866550 - 19866582
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||| ||||||||||||||||||||||    
T  19866550 ctccacaattaaattgtgtgagctctagccact 19866582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 25279050 - 25279018
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccact 334  Q
    |||||||||| ||||||||||||||||||||||    
T  25279050 ctccacaattaaattgtgtgagctctagccact 25279018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 27739805 - 27739841
Alignment:
Q  266 tattatatgtaggagccggagtttgaaccccgtacac 302  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  27739805 tattatatgtaggggccggagtttgaaccccggacac 27739841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 12024 - 12110
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| |||||||||||| |||        |||||||||| |||||||||| ||||||||||||||||    
T  12024 ttgcatattatatgcaggagccggggtttgaaccccggacactccacttctccacaattaaattgtgtgaactctagccactagact 12110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 59813 - 59899
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac--------aatttaattgtgtgagctctagccactagact 339  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||        |||| |||||||||||||||||||||||||||    
T  59813 ttgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagact 59899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 8996 - 9079
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtaca--------ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||| ||||||||||||| |||||||| | |        |||||||||| ||||||||||||||||||||||||    
T  8996 ttgcatattatatgcaggagccggagttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccactag 9079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 4005 - 3971
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||||||||||||||||||||||||||||    
T  4005 ctccacaatttaattgtgtgagctctagccactag 3971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 50835 - 50798
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  50835 ctccacaatttaattgtgtgagctctaaccactagact 50798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1185 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 2384 - 2350
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  2384 ctccacaattaaattgtgtgagctctagccactag 2350  T

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Target: scaffold0690 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 3745 - 3779
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  3745 ctccacaattaaattgtgtgagctctagccactag 3779  T

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Target: scaffold0460 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 12538 - 12572
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  12538 ctccacaattaaattgtgtgagctctagccactag 12572  T

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Target: scaffold0366 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 900 - 854
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  900 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 854  T

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Target: scaffold0276 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 1339 - 1373
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||| |||||||||||||||||||    
T  1339 ctccacaatttaattatgtgagctctagccactag 1373  T

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Target: scaffold0187 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 11160 - 11114
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  11160 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 11114  T

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Target: scaffold0187; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 21488 - 21442
Alignment:
Q  261 ttgcatattatatgtaggagccggagtttgaaccccgtacactccac 307  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  21488 ttgcatattatatgcaggagccggggttcgaaccccggacactccac 21442  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 17699 - 17733
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  17699 ctccacaattaaattgtgtgagctctagccactag 17733  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 10817 - 10783
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  10817 ctccacaattaaattgtgtgagctctagccactag 10783  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 112187 - 112221
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  112187 ctccacaattaaattgtgtgagctctagccactag 112221  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 12252 - 12218
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  12252 ctccacaattaaattgtgtgagctctagccactag 12218  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 8816 - 8782
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactag 336  Q
    ||||||||||||||||||| |||||||||||||||    
T  8816 ctccacaatttaattgtgtcagctctagccactag 8782  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 1341 - 1374
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  1341 ctccacaattaaattgtgtgagctctagccacta 1374  T

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Target: scaffold0330 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 6847 - 6880
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    ||||||||||||| ||||||||||||||||||||    
T  6847 ctccacaatttaactgtgtgagctctagccacta 6880  T

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Target: scaffold0254 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 1396 - 1429
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||| |||||||||||||||||||||||    
T  1396 ctccacaattaaattgtgtgagctctagccacta 1429  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 15843 - 15880
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  15843 ctccacaattaaattgtgtgagctctagccattagact 15880  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 45989 - 46022
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccacta 335  Q
    |||||||||||||||||||||| |||||||||||    
T  45989 ctccacaatttaattgtgtgagttctagccacta 46022  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 49992 - 49955
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  49992 ctccacaatttaattgtgtgagctctaactactagact 49955  T

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Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 93973 - 93936
Alignment:
Q  302 ctccacaatttaattgtgtgagctctagccactagact 339  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  93973 ctccacaattaaattgtatgagctctagccactagact 93936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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