View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12991_low_47 (Length: 202)

Name: NF12991_low_47
Description: NF12991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12991_low_47
NF12991_low_47
[»] chr7 (32 HSPs)
chr7 (1-187)||(40554511-40554697)
chr7 (1-179)||(48744401-48744579)
chr7 (2-180)||(8756151-8756328)
chr7 (1-179)||(8249251-8249428)
chr7 (2-181)||(13898344-13898523)
chr7 (1-98)||(5294591-5294688)
chr7 (1-98)||(5295764-5295861)
chr7 (1-98)||(5296937-5297034)
chr7 (114-183)||(39431183-39431252)
chr7 (114-185)||(4326083-4326154)
chr7 (116-183)||(13864365-13864432)
chr7 (114-180)||(23556331-23556397)
chr7 (113-181)||(14274318-14274386)
chr7 (114-180)||(23557520-23557586)
chr7 (114-183)||(44190212-44190281)
chr7 (114-180)||(16463056-16463121)
chr7 (106-183)||(3288756-3288833)
chr7 (128-183)||(21733855-21733908)
chr7 (128-183)||(21734414-21734467)
chr7 (141-184)||(11311074-11311117)
chr7 (146-184)||(11382867-11382905)
chr7 (146-184)||(11389344-11389382)
chr7 (106-180)||(14188294-14188368)
chr7 (106-180)||(14190892-14190966)
chr7 (146-184)||(16009597-16009635)
chr7 (150-190)||(831624-831664)
chr7 (150-190)||(1196804-1196844)
chr7 (106-190)||(11662083-11662167)
chr7 (144-180)||(13256707-13256743)
chr7 (144-180)||(21230960-21230996)
chr7 (80-135)||(33002105-33002161)
chr7 (150-190)||(34958583-34958623)
[»] chr6 (18 HSPs)
chr6 (1-187)||(18659305-18659491)
chr6 (1-187)||(13750272-13750458)
chr6 (1-180)||(29847280-29847458)
chr6 (1-190)||(29415547-29415736)
chr6 (2-179)||(5109716-5109893)
chr6 (1-181)||(16132424-16132605)
chr6 (3-183)||(24441530-24441710)
chr6 (1-179)||(19443038-19443216)
chr6 (1-102)||(24267714-24267815)
chr6 (114-183)||(611787-611856)
chr6 (119-180)||(1639949-1640010)
chr6 (146-184)||(4477878-4477916)
chr6 (146-184)||(25397194-25397232)
chr6 (146-183)||(23839219-23839256)
chr6 (144-184)||(1368-1408)
chr6 (144-184)||(8327-8367)
chr6 (144-180)||(1254847-1254883)
chr6 (144-184)||(25348506-25348546)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-187)||(7548-7734)
[»] scaffold0962 (1 HSPs)
scaffold0962 (1-180)||(616-795)
[»] chr5 (15 HSPs)
chr5 (1-180)||(21663143-21663322)
chr5 (1-183)||(8952038-8952220)
chr5 (1-190)||(22777060-22777249)
chr5 (1-180)||(22356904-22357083)
chr5 (1-179)||(22470698-22470876)
chr5 (113-181)||(30137973-30138041)
chr5 (106-190)||(10817790-10817874)
chr5 (144-183)||(23111197-23111236)
chr5 (129-180)||(24276499-24276550)
chr5 (129-180)||(24385663-24385714)
chr5 (146-184)||(18407940-18407978)
chr5 (146-184)||(19512407-19512445)
chr5 (146-184)||(28370051-28370089)
chr5 (140-180)||(22438748-22438788)
chr5 (144-180)||(36461059-36461095)
[»] chr3 (21 HSPs)
chr3 (1-185)||(14818953-14819137)
chr3 (1-184)||(3393751-3393934)
chr3 (1-180)||(18366515-18366694)
chr3 (1-180)||(12276667-12276848)
chr3 (1-180)||(52212432-52212611)
chr3 (1-179)||(178482-178661)
chr3 (1-190)||(52337946-52338134)
chr3 (1-176)||(13025575-13025750)
chr3 (1-176)||(13029167-13029342)
chr3 (52-180)||(23392820-23392948)
chr3 (1-98)||(24340029-24340126)
chr3 (90-183)||(43929352-43929446)
chr3 (1-91)||(12159154-12159244)
chr3 (1-91)||(13511936-13512026)
chr3 (116-180)||(6820152-6820216)
chr3 (106-190)||(18893659-18893743)
chr3 (128-183)||(34851296-34851349)
chr3 (146-184)||(9534348-9534386)
chr3 (147-184)||(18929267-18929304)
chr3 (140-181)||(29171852-29171893)
chr3 (140-180)||(17513839-17513879)
[»] chr8 (21 HSPs)
chr8 (1-187)||(32950772-32950958)
chr8 (12-179)||(24979995-24980162)
chr8 (5-136)||(22583703-22583835)
chr8 (38-183)||(17272634-17272779)
chr8 (1-136)||(23889672-23889808)
chr8 (1-98)||(17611384-17611481)
chr8 (90-190)||(22919961-22920062)
chr8 (1-91)||(34302418-34302508)
chr8 (12-91)||(23451353-23451432)
chr8 (1-91)||(24496473-24496563)
chr8 (153-190)||(21931725-21931762)
chr8 (150-190)||(38184686-38184726)
chr8 (144-183)||(23482050-23482089)
chr8 (127-180)||(14056564-14056615)
chr8 (127-180)||(25111980-25112031)
chr8 (144-181)||(43113041-43113078)
chr8 (147-183)||(18614294-18614330)
chr8 (152-180)||(20387508-20387536)
chr8 (144-180)||(22433615-22433651)
chr8 (144-184)||(39364939-39364979)
chr8 (144-180)||(42559455-42559491)
[»] chr2 (16 HSPs)
chr2 (1-179)||(26904273-26904451)
chr2 (1-179)||(21245553-21245731)
chr2 (1-179)||(24273035-24273214)
chr2 (1-179)||(28350028-28350206)
chr2 (114-177)||(31521155-31521218)
chr2 (114-187)||(43707046-43707119)
chr2 (114-166)||(22790275-22790327)
chr2 (106-190)||(21072679-21072763)
chr2 (144-184)||(23265161-23265201)
chr2 (144-184)||(23280229-23280269)
chr2 (106-190)||(41300920-41301004)
chr2 (140-190)||(22703989-22704039)
chr2 (146-183)||(6483738-6483775)
chr2 (146-183)||(6487205-6487242)
chr2 (147-184)||(21908381-21908418)
chr2 (146-183)||(24661598-24661635)
[»] chr1 (14 HSPs)
chr1 (1-179)||(21660242-21660420)
chr1 (1-183)||(52984095-52984277)
chr1 (1-187)||(18824488-18824674)
chr1 (1-179)||(18271193-18271371)
chr1 (1-179)||(18275847-18276025)
chr1 (1-98)||(21473660-21473757)
chr1 (114-183)||(35064523-35064592)
chr1 (114-183)||(20058470-20058539)
chr1 (146-183)||(20805342-20805379)
chr1 (144-183)||(32651591-32651630)
chr1 (146-183)||(20437021-20437058)
chr1 (140-180)||(7791559-7791599)
chr1 (115-179)||(13227876-13227940)
chr1 (144-184)||(18712818-18712858)
[»] scaffold0447 (2 HSPs)
scaffold0447 (1-176)||(7721-7896)
scaffold0447 (1-176)||(12335-12510)
[»] scaffold0383 (1 HSPs)
scaffold0383 (1-176)||(10330-10505)
[»] chr4 (27 HSPs)
chr4 (1-183)||(10705602-10705784)
chr4 (1-183)||(10919372-10919554)
chr4 (1-187)||(14931120-14931306)
chr4 (1-187)||(3338239-3338422)
chr4 (1-179)||(20898752-20898929)
chr4 (1-184)||(6512492-6512676)
chr4 (1-177)||(15991136-15991313)
chr4 (1-98)||(15368399-15368496)
chr4 (1-98)||(16224248-16224345)
chr4 (90-180)||(13043769-13043859)
chr4 (114-187)||(8711517-8711590)
chr4 (1-98)||(15371908-15372005)
chr4 (1-98)||(15374200-15374297)
chr4 (114-175)||(15344922-15344983)
chr4 (114-180)||(15447376-15447442)
chr4 (114-183)||(29856676-29856745)
chr4 (113-180)||(27028730-27028798)
chr4 (140-183)||(13888657-13888700)
chr4 (146-184)||(8834917-8834955)
chr4 (128-190)||(45005943-45006003)
chr4 (153-183)||(15245244-15245274)
chr4 (150-184)||(17143260-17143294)
chr4 (106-183)||(13447507-13447584)
chr4 (144-180)||(15408158-15408194)
chr4 (150-190)||(15747547-15747587)
chr4 (144-180)||(18230755-18230791)
chr4 (144-180)||(56114762-56114798)
[»] scaffold0429 (1 HSPs)
scaffold0429 (3-183)||(1997-2177)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-179)||(52076-52254)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-180)||(25521-25700)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-179)||(60296-60474)
scaffold0004 (114-184)||(204346-204416)
scaffold0004 (144-183)||(116915-116954)
[»] scaffold0107 (2 HSPs)
scaffold0107 (1-190)||(3761-3949)
scaffold0107 (144-180)||(40532-40568)
[»] scaffold0126 (1 HSPs)
scaffold0126 (4-181)||(6920-7097)
[»] scaffold0371 (1 HSPs)
scaffold0371 (12-125)||(3759-3872)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-96)||(3985-4080)
[»] scaffold0023 (1 HSPs)
scaffold0023 (90-180)||(163296-163386)
[»] scaffold2046 (1 HSPs)
scaffold2046 (1-76)||(1058-1133)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-96)||(17336-17431)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-91)||(35633-35723)
[»] scaffold0234 (1 HSPs)
scaffold0234 (114-187)||(25975-26048)
[»] scaffold0377 (1 HSPs)
scaffold0377 (1-91)||(16192-16282)
[»] scaffold0016 (1 HSPs)
scaffold0016 (114-183)||(174104-174173)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-57)||(26002-26058)
[»] scaffold0106 (1 HSPs)
scaffold0106 (114-183)||(21971-22040)
[»] scaffold0175 (1 HSPs)
scaffold0175 (113-179)||(18832-18899)
[»] scaffold0956 (1 HSPs)
scaffold0956 (114-183)||(2091-2160)
[»] scaffold0331 (1 HSPs)
scaffold0331 (130-179)||(4708-4757)
[»] scaffold0490 (1 HSPs)
scaffold0490 (106-190)||(5859-5943)
[»] scaffold0256 (1 HSPs)
scaffold0256 (36-136)||(1890-1991)
[»] scaffold0338 (1 HSPs)
scaffold0338 (121-181)||(229-289)
[»] scaffold0309 (1 HSPs)
scaffold0309 (106-190)||(9115-9199)
[»] scaffold0138 (1 HSPs)
scaffold0138 (146-183)||(12318-12355)
[»] scaffold0031 (2 HSPs)
scaffold0031 (153-190)||(121931-121968)
scaffold0031 (153-190)||(132807-132844)
[»] scaffold0222 (1 HSPs)
scaffold0222 (144-184)||(16839-16879)
[»] scaffold0053 (1 HSPs)
scaffold0053 (147-183)||(79089-79125)
[»] scaffold0020 (1 HSPs)
scaffold0020 (144-184)||(101924-101964)
[»] scaffold0815 (1 HSPs)
scaffold0815 (114-183)||(1440-1507)
[»] scaffold0335 (1 HSPs)
scaffold0335 (153-183)||(2625-2655)
[»] scaffold0180 (1 HSPs)
scaffold0180 (150-184)||(11651-11685)
[»] scaffold0077 (1 HSPs)
scaffold0077 (144-190)||(22095-22141)
[»] scaffold0720 (1 HSPs)
scaffold0720 (106-179)||(442-515)
[»] scaffold0422 (1 HSPs)
scaffold0422 (128-180)||(3962-4012)
[»] scaffold0388 (1 HSPs)
scaffold0388 (144-181)||(15104-15141)
[»] scaffold0298 (1 HSPs)
scaffold0298 (150-183)||(623-656)
[»] scaffold0169 (1 HSPs)
scaffold0169 (153-190)||(7004-7041)
[»] scaffold0123 (1 HSPs)
scaffold0123 (106-183)||(1264-1341)
[»] scaffold0096 (1 HSPs)
scaffold0096 (146-179)||(39508-39541)
[»] scaffold1276 (1 HSPs)
scaffold1276 (144-180)||(1154-1190)
[»] scaffold0599 (1 HSPs)
scaffold0599 (144-180)||(1087-1123)
[»] scaffold0019 (1 HSPs)
scaffold0019 (144-180)||(135492-135528)


Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 40554697 - 40554511
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40554697 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacaattcaattctacattctaaccctaattcccaaat 40554598  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40554597 tcataaacaactacatgttaaatcaatttcagaattttcatacactatgattattgagagttagcctcacccttaccttaattctga 40554511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 48744401 - 48744579
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48744401 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattacctactacttccaacgattcaattctacattctaaccctaattcccaaat 48744500  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48744501 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 48744579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 8756328 - 8756151
Alignment:
Q  2 gattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaatt 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  8756328 gattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaacgctaattccc-aatt 8756230  T
Q  102 cataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  8756229 cataaacaactacatgttaaattaatttcagaatttacatacactatgattattgagagttagcatcgcccttacctta 8756151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 8249428 - 8249251
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  8249428 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttcaacaattcaattctacattctaaccctaattcccaaat 8249329  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8249328 tcat-aacaaccacatgttaaatcaatttcagaattcacatacactatgattattgagagttagcctcacccttacctt 8249251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 13898344 - 13898523
Alignment:
Q  2 gattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaatt 101  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| |    
T  13898344 gattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttcttccaacgattcaattctacatgctaaccctaattctcaaa-t 13898442  T
Q  102 cataaacaa-ctacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaa 181  Q
    ||  ||||| |  ||||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  13898443 caagaacaaccctcatgttaaatgaatttcagaatttacatacactataattattgaaagttagcctcacccttaccttaa 13898523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5294688 - 5294591
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||    
T  5294688 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaa 5294591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5295861 - 5295764
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||    
T  5295861 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaa 5295764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5297034 - 5296937
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||    
T  5297034 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaa 5296937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 39431252 - 39431183
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  39431252 catgttaaatcaatttcagaatttacatacactataattattgaaagttagcctcacccttaccttaatt 39431183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 4326083 - 4326154
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattct 185  Q
    ||||||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  4326083 catgttaaatcaatttcagaatttacatacactataattatcgaaagttagcctcacccttaccttaattct 4326154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 13864432 - 13864365
Alignment:
Q  116 tgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  13864432 tgttaaatcaatttcagaatttacatacactataattattgaaagttagcctcacccttaccttaatt 13864365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 23556331 - 23556397
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  23556331 catgttaaatcaatttcagaatttacatacactataattattgaaagttagcctcacccttacctta 23556397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 14274318 - 14274386
Alignment:
Q  113 acatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaa 181  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14274318 acatgttaaatcaatttcagaatttacatacactataattattgaaagttagtctcacccttaccttaa 14274386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 23557520 - 23557586
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  23557520 catgttaaatcaatttcagaatttaaatacactataattattgaaagttagcctcacccttacctta 23557586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 44190281 - 44190212
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  44190281 catgttaaattaatttcagaatttacatacactataattattgaaagttagcctcaccattaccttaatt 44190212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 16463056 - 16463121
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||| |||| |||||||| ||||||||| |||||||| |||||||| |||||||||||||    
T  16463056 catgttaaatcaatttaagaattta-atacactataattattgaaagttagccgcacccttacctta 16463121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 3288833 - 3288756
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| |||  ||||||||||||||||||||||||    
T  3288833 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcacccttaccttaatt 3288756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 21733908 - 21733855
Alignment:
Q  128 ttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||  ||||||||||||| |||  ||||||||||||||||||||||||    
T  21733908 ttcagaattta--tacactatgattactgaatgttagcctcacccttaccttaatt 21733855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 21734467 - 21734414
Alignment:
Q  128 ttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||  ||||||||||||| |||  ||||||||||||||||||||||||    
T  21734467 ttcagaattta--tacactatgattactgaatgttagcctcacccttaccttaatt 21734414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 11311074 - 11311117
Alignment:
Q  141 tacactatgattattgagagttagcctcacccttaccttaattc 184  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||    
T  11311074 tacactattattattgagagatagtctcacccttaccttaattc 11311117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 11382905 - 11382867
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  11382905 tatgattattgagagatagtctcacccttaccttaattc 11382867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 11389382 - 11389344
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  11389382 tatgattattgagagatagtctcacccttaccttaattc 11389344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 14188368 - 14188294
Alignment:
Q  106 aacaactacatgttaaatccat--ttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||| |||||||||||| |   |||||||||||  ||||||||||||| |||  |||||||||||||||||||||    
T  14188368 aacaacaacatgttaaatcaaaaattcagaattta--tacactatgattactgaatgttagcctcacccttacctta 14188294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 14190966 - 14190892
Alignment:
Q  106 aacaactacatgttaaatccat--ttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||| |||||||||||| |   |||||||||||  ||||||||||||| |||  |||||||||||||||||||||    
T  14190966 aacaacaacatgttaaatcaaaaattcagaattta--tacactatgattactgaatgttagcctcacccttacctta 14190892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 16009597 - 16009635
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  16009597 tatgattattgagagatagtctcacccttaccttaattc 16009635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 831664 - 831624
Alignment:
Q  150 attattgagagttagcctcacccttaccttaattctgatga 190  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  831664 attattgagagttagtctcacccttaccttagttttgatga 831624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 1196844 - 1196804
Alignment:
Q  150 attattgagagttagcctcacccttaccttaattctgatga 190  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  1196844 attattgagagttagtctcacccttaccttagttttgatga 1196804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 11662083 - 11662167
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||| ||||||||||||   | |||||||||||  |||||||| |||| |||  ||||||||||||||||||||| || ||||||    
T  11662083 aacaacaacatgttaaatcacaaattcagaattta--tacactataattactgaatgttagcctcacccttaccttagttttgatga 11662167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 13256707 - 13256743
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  13256707 actataatcattgagagttagcctcacccttacctta 13256743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 21230996 - 21230960
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  21230996 actatgattattgagagatagtctcacccttacctta 21230960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 33002105 - 33002161
Alignment:
Q  80 ttctaaccctaattcccaaattcataaacaactacatgttaaatcc-atttcagaat 135  Q
    |||||||||||||||||||||||  |||| || || |||||||||| ||||||||||    
T  33002105 ttctaaccctaattcccaaattcccaaactacaacctgttaaatccaatttcagaat 33002161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 34958583 - 34958623
Alignment:
Q  150 attattgagagttagcctcacccttaccttaattctgatga 190  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  34958583 attattgagagttagtctcacccttaccttagttttgatga 34958623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 2e-94; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18659305 - 18659491
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18659305 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 18659404  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18659405 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagtctcacccttaccttaattctga 18659491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 13750458 - 13750272
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13750458 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctatattctaaccctaattcccaaat 13750359  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13750358 tcataaacaagtacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcagccttaccttaattctga 13750272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 29847458 - 29847280
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29847458 tgattaatctgcaatctaa-catcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 29847360  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29847359 tcataaacaactacatgttaaatcaatttcagaatttacatgcactatgattattgagagttagcctcacccttacctta 29847280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 29415736 - 29415547
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||| |||| ||||||||| | || |||||||||||||||||||||||||||||||| |    
T  29415736 tgattaatctacaatctaaacatcctttatcatcctaatccatcaaattatctacttctttccacaattcaattctacattctaaccctaattcccaact 29415637  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  29415636 tcataaacaactacatgttaaatcaatttcagagtttacatacactatgattattgagagttagcctcactcttaccttagttttgatga 29415547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 5109893 - 5109716
Alignment:
Q  2 gattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaatt 101  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||| ||| |||| |||| | || ||||||||||||| |||||||||||||||||||||    
T  5109893 gattaatttacaatctaaacatcctttatcaccctaatccatcagtttatctacatctttccacaattcaattctacactctaaccctaattcccaaatt 5109794  T
Q  102 cataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5109793 cataaacaactacatgttaaatcaatttcagattttacatacactatgattattgagagttagcctcacccttacctt 5109716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 16132605 - 16132424
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||| ||||| |||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  16132605 tgatcaatctacaatctaagcatcctttatcaccctaatccatcaggttaccaacttcttccaacgattcaattctacatgctaaccctaattctcaaat 16132506  T
Q  101 tcataaacaactacatgtt-aaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaa 181  Q
     |||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16132505 ccataaacaactacatgttaaaatcaatttcagaatttacatacactaagattattgagagttagcctcacccttaccttaa 16132424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 24441530 - 24441710
Alignment:
Q  3 attaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaattc 102  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||| ||||||||||||||||||||    
T  24441530 attaacctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccacaattcaattctacattttaaccctaattcccaaattc 24441629  T
Q  103 ataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  24441630 ataaacaaccacatgttaaatcaatttcagaattcacaaacactatgattattgagagttagtctcacccttaccttaatt 24441710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 19443216 - 19443038
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||     
T  19443216 tgattaaactacaatctaaacatcctttatcaccctaatccatcagattatctacttcttccaacgattcaattctacatgctaaccctaattcccaaa- 19443118  T
Q  101 tcataaacaa-ctacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||  ||||| |  ||||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  19443117 tcaagaacaaccctcatgttaaatcaatttcagaatttacatacactataattattgaaagttagtctcacccttacctt 19443038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24267714 - 24267815
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||| ||| ||||||||||||||| ||||||||||| ||||||||| | |||||||||||||| |||||||||||| ||||||| ||||||| |||||    
T  24267714 tgattattctacaatctaaacatcctttatcaccctaacccatcagatcatctacttcttccaacaattcaattctacgttctaactctaattctcaaat 24267813  T
Q  101 tc 102  Q
    ||    
T  24267814 tc 24267815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 611787 - 611856
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  611787 catgttaaatcaatttcagaatttacatacactataattattgaaagtttgcctcacccttaccttaatt 611856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 1639949 - 1640010
Alignment:
Q  119 taaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||| || |||||||||| ||| ||||| || ||||||||||||||||||||||||||||    
T  1639949 taaatcaatatcagaatttatataaactataatcattgagagttagcctcacccttacctta 1640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 4477878 - 4477916
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  4477878 tatgattattgagagatagtctcacccttaccttaattc 4477916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 25397194 - 25397232
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    |||||| || |||||||||||||||||||||||||||||    
T  25397194 tatgatcatcgagagttagcctcacccttaccttaattc 25397232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 23839219 - 23839256
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  23839219 tatgattattgagagatagtctcacccttaccttaatt 23839256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 1368 - 1408
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  1368 actataatcattgagagttaacctcacccttaccttaattc 1408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 8327 - 8367
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  8327 actataatcattgagagttaacctcacccttaccttaattc 8367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 1254847 - 1254883
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  1254847 actataatcattgagagttagcctcacccttacctta 1254883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 25348506 - 25348546
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||| ||||||||||| ||| |||||||||||||||||||    
T  25348506 actattattattgagagatagtctcacccttaccttaattc 25348546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 7548 - 7734
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7548 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 7647  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7648 tcataaacaactacatgttaaattaatttcagaatttacatacaatatgattattgagagttagcctcacccttaccttaattctga 7734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 795 - 616
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  795 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattcttcattctaaccctaattcccaaat 696  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  695 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 3e-90; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 21663322 - 21663143
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21663322 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattcttcattctaaccctaattcccaaat 21663223  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21663222 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 21663143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 8952220 - 8952038
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||| ||| ||||||||||||||| |||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8952220 tgattattctacaatctaaacatcctttatcaccctaatccataagatcatctacttcttccaacaattcaattctacattctaaccctaattcccaaat 8952121  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8952120 tcataaacaactacatgttaaatcaatttcagagtttacatacactatgattattgagagttagcctcacccttaccttaatt 8952038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 22777249 - 22777060
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||    
T  22777249 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctatttctttccacaattcaattctacattctaaccctaattcccaaat 22777150  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22777149 tcatgaacaactacatgttaaatcaatttcagagtttacatacactatgattattgagagttagcctcacccttaccttaattcagatga 22777060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 22357083 - 22356904
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||    
T  22357083 tgattaatctacaatctaaacatcctttatctccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaaat 22356984  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22356983 tcataaacaactacatgttaaatcaatttcagagtttacatacactatgattattgagagttagcctcacccttacctta 22356904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 22470698 - 22470876
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  22470698 tgatcaatctacaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacatgctaaccctaattcccaaa- 22470796  T
Q  101 tcataaacaa-ctacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||  ||||| |  ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  22470797 tcaagaacaaccctcatgttaaatcaatttcagaatttacatacactataattattgaaagttagcctcactcttacctt 22470876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 30138041 - 30137973
Alignment:
Q  113 acatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaa 181  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| |||||| || |||||||||||||    
T  30138041 acatgttaaatcaatttcagaatttacatacactataattattgaaagttagtcttacccttaccttaa 30137973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 10817790 - 10817874
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| |||  ||||| ||||||||||||||||||| |||||    
T  10817790 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagtctcacccttaccttaattcagatga 10817874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 23111236 - 23111197
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  23111236 actatgattattgagagatagtctcacccttaccttaatt 23111197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 24276550 - 24276499
Alignment:
Q  129 tcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||| ||| ||||  || ||||||||||||||||||||||||||||    
T  24276550 tcagaatttatataaactagaatcattgagagttagcctcacccttacctta 24276499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 24385663 - 24385714
Alignment:
Q  129 tcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||| ||| ||||  || ||||||||||||||||||||||||||||    
T  24385663 tcagaatttatataaactagaatcattgagagttagcctcacccttacctta 24385714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 18407978 - 18407940
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  18407978 tatgattattgagagatagtctcacccttaccttaattc 18407940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 19512407 - 19512445
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  19512407 tatgattattgagagatagtctcacccttaccttaattc 19512445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 28370089 - 28370051
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  28370089 tatgattattgagagatagtctcacccttaccttaattc 28370051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 22438788 - 22438748
Alignment:
Q  140 atacactatgattattgagagttagcctcacccttacctta 180  Q
    ||||| ||||||||||||||| ||| |||||||||||||||    
T  22438788 atacattatgattattgagagatagtctcacccttacctta 22438748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 36461059 - 36461095
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  36461059 actataatcattgagagttagcctcacccttacctta 36461095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 14818953 - 14819137
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14818953 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaatgattcaattctacattctaaccctaattcccaaat 14819052  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattct 185  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  14819053 tcataaacaactacatgttaaatctatttcagaatttatatacactttgattattgagagttagcctcacccttaccttaattct 14819137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 3393934 - 3393751
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3393934 tgattaatctgcaatctaaacatcctttatcaccctaatccatcaaattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 3393835  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3393834 tcataaataactacatgttaaatcaatttcagaatttacatacactatgattattgggagttagcctcacccttaccttaattc 3393751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 18366694 - 18366515
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  18366694 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaatgattcaattctacattctaaccctaattctcaaat 18366595  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18366594 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 18366515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 12276667 - 12276848
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12276667 tgattaatctgcaatctaaacatcctttatcatcctaatccatcagattacctacttcttctaacgattcaattctacattctaaccctaattcccaaat 12276766  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttac--atacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  12276767 tcataaacaactacatgttaaatcaatttcagaatttacatatacactatgattattgagagttagcatcacccttacctta 12276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 52212611 - 52212432
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  52212611 tgattaatttgaaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacaattcaattctaaattctaaccctaattcctaaat 52212512  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52212511 tcataaacaactatatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 52212432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 178661 - 178482
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  178661 tgattaatctacaatctaagcatcccttatcaccctaatccatcagattacctacttcttccaacgattcaattctacatgctaaccctaattcccaaat 178562  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacac-tatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  178561 tcataaacaactacatgttaaatcaatttcagaatttacatacacttataattattgaaagttagcctcacccttacctt 178482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 52338134 - 52337946
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||||| | || ||||||||||| ||||||||||||||||||||||    
T  52338134 tgattaatctacaatctaaacatcctttataaccctaatccatcagattatctacttctttccacaattcaattctatattctaaccctaattcccaaat 52338035  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52338034 tcat-aacaaccacatgttaaatcaatttcagaattcacatacactatgattattgagagttagcctcacccttaccttaattctgatga 52337946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 13025750 - 13025575
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||     
T  13025750 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttcttccaacgattcaattctacatgctaaccctaattcccaaa- 13025652  T
Q  101 tcataaacaa-ctacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttac 176  Q
    |||  ||||| |  ||||||||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||||||    
T  13025651 tcaagaacaaccctcatgttaaatcaatttcagagtttacgtacactataattattgaaagttagcctcacccttac 13025575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 13029342 - 13029167
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||     
T  13029342 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttcttccaacgattcaattctacatgctaaccctaattcccaaa- 13029244  T
Q  101 tcataaacaa-ctacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttac 176  Q
    |||  ||||| |  ||||||||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||||||    
T  13029243 tcaagaacaaccctcatgttaaatcaatttcagagtttacgtacactataattattgaaagttagcctcacccttac 13029167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 23392948 - 23392820
Alignment:
Q  52 ctacttcttccaacgattcaattctacattctaaccctaattcccaaattcataaacaactacatgttaaatccatttcagaatttacatacactatgat 151  Q
    ||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23392948 ctacttctttccacaattcaattctacattctaaccctaattcccaaattcataaacaactacatgttaaatcaatttcagagtttacatacactatgat 23392849  T
Q  152 tattgagagttagcctcacccttacctta 180  Q
    ||||||||||||| |||||||||||||||    
T  23392848 tattgagagttagtctcacccttacctta 23392820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24340126 - 24340029
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||    
T  24340126 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaa 24340029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 43929352 - 43929446
Alignment:
Q  90 aattcccaaattcataaacaacta-catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||| ||| ||||||||  ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  43929352 aattcccaaaatcaaaaacaactctcatgttaaatcaatttcagaatttacatacactataattattgaaagttagcctcacccttaccttaatt 43929446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12159154 - 12159244
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaa 91  Q
    |||||| ||| ||||||||| ||||| ||||||||||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||    
T  12159154 tgattattctacaatctaaatatcctttatcaccctaatccatcagataatctacttctttccacaatttaattctacattctaaccctaa 12159244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13511936 - 13512026
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaa 91  Q
    |||||| ||| ||||||||||||||| |||||||||||||||| |||| | ||||||||| | || |||||||||||| ||||||||||||    
T  13511936 tgattattctacaatctaaacatcctttatcaccctaatccattagatcatctacttctttccacaattcaattctactttctaaccctaa 13512026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 6820152 - 6820216
Alignment:
Q  116 tgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||| ||| ||||||||||||||||||| |||||||| ||||||  ||||||||||||||    
T  6820152 tgttaaatcaattacagaatttacatacactataattattgaaagttagtatcacccttacctta 6820216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 18893659 - 18893743
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| |||  ||||||||||||||||||||| || ||||||    
T  18893659 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcacccttaccttagttttgatga 18893743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 34851349 - 34851296
Alignment:
Q  128 ttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||  ||||||||||||| |||  ||||||||||||||||||||||||    
T  34851349 ttcagaattta--tacactatgattactgaatgttagcctcacccttaccttaatt 34851296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 9534348 - 9534386
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  9534348 tatgattattgagagatagtctcacccttaccttaattc 9534386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 18929267 - 18929304
Alignment:
Q  147 atgattattgagagttagcctcacccttaccttaattc 184  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  18929267 atgattattgagagatagtctcacccttaccttaattc 18929304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 29171893 - 29171852
Alignment:
Q  140 atacactatgattattgagagttagcctcacccttaccttaa 181  Q
    |||||||||||||| |||| ||||| ||||||||||||||||    
T  29171893 atacactatgattactgagtgttagtctcacccttaccttaa 29171852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 17513839 - 17513879
Alignment:
Q  140 atacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  17513839 atacactatgattactgagtgttagtctcacccttacctta 17513879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 3e-87; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 32950772 - 32950958
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||| ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32950772 tgatcaatctacaatctaaacatcctttatcaccctaatccattagattacctacttcttccaacgattcaattctacatgctaaccctaattcccaaat 32950871  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32950872 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 32950958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 24979995 - 24980162
Alignment:
Q  12 caatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaattcataaacaac 111  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||| |||| | || |||||||||||||||||||||||||||||||||||||||||||||    
T  24979995 caatctaaacatcctttatcaccctaatccatcagtttatctacatctttccacaattcaattctacattctaaccctaattcccaaattcataaacaac 24980094  T
Q  112 tacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24980095 tacatgttaaatcaatttcagagtttacatacactatgattattgagagttagcctcacccttacctt 24980162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 22583835 - 22583703
Alignment:
Q  5 taatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaattcat 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22583835 taatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctaaattctaaccctaattcccaaattcat 22583736  T
Q  105 aaacaactacatgttaaa-tccatttcagaatt 136  Q
    |||||||||||||||||| || |||||||||||    
T  22583735 aaacaactacatgttaaattcaatttcagaatt 22583703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 17272779 - 17272634
Alignment:
Q  38 atccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaattcataaacaactacatgttaaatccatttcagaattt 137  Q
    ||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||     
T  17272779 atccatcagattatctacttctttccacaattcaattctacattctaaccctaattccaaaattcataaacaaccacatgttaaatcaatttcagaattc 17272680  T
Q  138 acatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||    
T  17272679 acatacactatgattattgagatttagcctcacctttaccttaatt 17272634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 23889672 - 23889808
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||    
T  23889672 tgattaatctgcaatctaaacatcctttatcaccctaatccatcatattacctacttctttgaacgattcaattctaaattctaaccctaattccaaaat 23889771  T
Q  101 tcataaacaactacatgttaaa-tccatttcagaatt 136  Q
    |||||||||||||||||||||| || |||||||||||    
T  23889772 tcataaacaactacatgttaaattcaatttcagaatt 23889808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17611481 - 17611384
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||| ||||    
T  17611481 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttctacaattcaattctacattctaaccctaatttccaa 17611384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 22920062 - 22919961
Alignment:
Q  90 aattcccaaattcataaacaact-acatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgat 188  Q
    |||||||||| ||| |||||||  |||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||| |||| || |||    
T  22920062 aattcccaaaatcaaaaacaacccacatgttaaatcaatctcagaatttatatacactatgattattgagagttagcctcacccttactttaaatcagat 22919963  T
Q  189 ga 190  Q
    ||    
T  22919962 ga 22919961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34302418 - 34302508
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaa 91  Q
    |||||| ||| ||||||||||||||| |||||||||||||||| |||| | ||||||||| | || |||||||||||| ||||||||||||    
T  34302418 tgattattctacaatctaaacatcctttatcaccctaatccattagatcatctacttctttccacaattcaattctactttctaaccctaa 34302508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 23451353 - 23451432
Alignment:
Q  12 caatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaa 91  Q
    ||||| |||||| || ||||||||||||||||||||| | ||||||||| | || |||||||||||||||||||||||||    
T  23451353 caatcgaaacattctttatcaccctaatccatcagatcatctacttctttctacaattcaattctacattctaaccctaa 23451432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24496473 - 24496563
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaa 91  Q
    |||||| ||| ||||||||||||||| |||||||||||||||| | || | ||||||||| | || |||||||||||| ||||||||||||    
T  24496473 tgattattctacaatctaaacatcctttatcaccctaatccattaaatcatctacttctttccacaattcaattctactttctaaccctaa 24496563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 21931725 - 21931762
Alignment:
Q  153 attgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||||||||||||||||||||||||||||| |||||    
T  21931725 attgagagttagcctcacccttaccttaattcagatga 21931762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 38184726 - 38184686
Alignment:
Q  150 attattgagagttagcctcacccttaccttaattctgatga 190  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  38184726 attattgagagttagtctcacccttaccttaattcagatga 38184686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 23482089 - 23482050
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  23482089 actatgattattgagagatagtctcacccttaccttaatt 23482050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 14056615 - 14056564
Alignment:
Q  127 tttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||  ||| ||||||||||| ||| |||||||||||||||    
T  14056615 tttcagaatttacatac--tattattattgagagatagtctcacccttacctta 14056564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 25111980 - 25112031
Alignment:
Q  127 tttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||  ||| ||||||||||| ||| |||||||||||||||    
T  25111980 tttcagaatttacatac--tattattattgagagatagtctcacccttacctta 25112031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 43113041 - 43113078
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaa 181  Q
    ||||| || |||||||||||||||||||||||||||||    
T  43113041 actataatcattgagagttagcctcacccttaccttaa 43113078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 18614294 - 18614330
Alignment:
Q  147 atgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  18614294 atgattattgagagatagtctcacccttaccttaatt 18614330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 180
Target Start/End: Original strand, 20387508 - 20387536
Alignment:
Q  152 tattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||||||||||||||    
T  20387508 tattgagagttagcctcacccttacctta 20387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 22433651 - 22433615
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  22433651 actataatcattgagagttagcctcacccttacctta 22433615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 39364939 - 39364979
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||| ||||||||||| ||| |||||||||||||||||||    
T  39364939 actattattattgagagatagtctcacccttaccttaattc 39364979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 42559491 - 42559455
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  42559491 actataatcattgagagttagcctcacccttacctta 42559455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 26904273 - 26904451
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26904273 tgattaatctacaatctaaacaccctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 26904372  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26904373 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcatcacccttacctt 26904451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 21245553 - 21245731
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  21245553 tgatcaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttcttctaacgattcaattctacatgctaaccctaattcccaaat 21245652  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21245653 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 21245731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 24273214 - 24273035
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||| ||||| |||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  24273214 tgatcaatctacaatctaagcatcctttatcaccctaatccatcatattaccaacttcttccaacgattcaattctacatgctaaccctaattctcaaat 24273115  T
Q  101 tcataaacaactacatgtt-aaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  24273114 tcataaacaactacatgttaaaatcaatttcagaattttcatacactaagattattgagagttagcctcacccttacctt 24273035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 28350028 - 28350206
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| || |||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||     
T  28350028 tgattaatctacagtctaaacatcttttatcaccctaatccatcagattatctacttcttccaacgattcaattctacacgctaaccctaattcccaaa- 28350126  T
Q  101 tcataaacaa-ctacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||  ||||| |  ||||||||||| ||||||||||||||||||||||  |||| ||| |||||| ||||||||||||||    
T  28350127 tcaagaacaaccctcatgttaaatcaatttcagaatttacatacactaaaattaatgaaagttagactcacccttacctt 28350206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 31521155 - 31521218
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacc 177  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  31521155 catgttaaatcaatttcagaatttacatacactataattattgaaagttagcctcacccttacc 31521218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 43707119 - 43707046
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||||  |||||||||| ||||||||||    
T  43707119 catgttaaatcaatttcagaatttacatacactataattattgaaagttagtatcacccttacattaattctga 43707046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 22790327 - 22790275
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcc 166  Q
    ||||||||||| |||||||||| ||||||||||||||||||||  ||||||||    
T  22790327 catgttaaatcaatttcagaatctacatacactatgattattggaagttagcc 22790275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 21072763 - 21072679
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| |||  ||||||||||||||||||||| || ||||||    
T  21072763 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcacccttaccttagttttgatga 21072679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 23265161 - 23265201
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  23265161 actatgattattgagagatagtctcacccttaccttaattc 23265201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 23280229 - 23280269
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  23280229 actatgattattgagagatagtctcacccttaccttaattc 23280269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 41301004 - 41300920
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| |||  ||||||||||||||||||||| || ||||||    
T  41301004 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcacccttaccttagttttgatga 41300920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 22703989 - 22704039
Alignment:
Q  140 atacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||||||||||| | |  ||||||||||||||||||||||||| |||||    
T  22703989 atacactatgattactaaatgttagcctcacccttaccttaattcagatga 22704039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 6483738 - 6483775
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  6483738 tatgattattgagagatagtctcacccttaccttaatt 6483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 6487205 - 6487242
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  6487205 tatgattattgagagatagtctcacccttaccttaatt 6487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 21908381 - 21908418
Alignment:
Q  147 atgattattgagagttagcctcacccttaccttaattc 184  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  21908381 atgattattgagagatagtctcacccttaccttaattc 21908418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 24661598 - 24661635
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||| || ||||||||||||||||||||||||||||    
T  24661598 tatgatcatcgagagttagcctcacccttaccttaatt 24661635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 7e-85; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 21660242 - 21660420
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21660242 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacatgctaaccctaattcccaaat 21660341  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21660342 tcataaacaactacatgttaaatcaatttcagaatttacacacactatgattattgagagttagcctcacccttacctt 21660420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 52984095 - 52984277
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    ||||||||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52984095 tgattaatctgaaatctaaacatcctttattgccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 52984194  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  52984195 tcataaacaactacatgttaaatcaatttcagaatttgcatacactatgattattgagagttagcctcaccattaccttaatt 52984277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18824488 - 18824674
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||| ||| ||||||||||||||| |||||| |||||||||||||| | ||||||||| | || ||||||||||||||||||||||||||||||||||    
T  18824488 tgattattctacaatctaaacatcctttatcactctaatccatcagatcatctacttctttccacaattcaattctacattctaaccctaattcccaaat 18824587  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    ||||||||||| |||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18824588 tcataaacaaccacatgttaaatcaattttagagtttacatacactatgattattgagagttagcctcacccttaccttaattctga 18824674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 18271193 - 18271371
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    ||||||||||  |||||||||||| | |||||||||||||||||||||||  |||||||| | || ||||||||||||||||||||||||||||||||||    
T  18271193 tgattaatctataatctaaacatcttttatcaccctaatccatcagattatatacttctttccacaattcaattctacattctaaccctaattcccaaat 18271292  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  18271293 tcataaacaacaacatgttaaatcaatttcagagtttacatacactatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 18275847 - 18276025
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    ||||||||||  |||||||||||| | |||||||||||||||||||||||  |||||||| | || ||||||||||||||||||||||||||||||||||    
T  18275847 tgattaatctataatctaaacatcttttatcaccctaatccatcagattatatacttctttccacaattcaattctacattctaaccctaattcccaaat 18275946  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  18275947 tcataaacaacaacatgttaaatcaatttcagagtttacatacactatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21473660 - 21473757
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| |||| ||||||||| | || ||||||||||||||||||||||||||||||||    
T  21473660 tgattaatctacaatctaaacatcctttatcaccctaatccatcaaattatctacttctttctacaattcaattctacattctaaccctaattcccaa 21473757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 35064523 - 35064592
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  35064523 catgttaaatcaatttcagaatttacatacactataattattgaaagtcagcctcacccttaccttaatt 35064592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 20058470 - 20058539
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||| |||||| ||||||||||||| || | ||||||  ||||||||||||||||||||||||    
T  20058470 catgttaaatcaatttcataatttacatacaccataactattgaaggttagcctcacccttaccttaatt 20058539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 20805342 - 20805379
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||| |||||||||||||||||||||||||||||||    
T  20805342 tatgatcattgagagttagcctcacccttaccttaatt 20805379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 32651591 - 32651630
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  32651591 actatgattattgagagatagtctcacccttaccttaatt 32651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 183
Target Start/End: Complemental strand, 20437058 - 20437021
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  20437058 tatgattattgagagatagtctcacccttaccttaatt 20437021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 7791599 - 7791559
Alignment:
Q  140 atacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  7791599 atacactatgattactgagtgttagtctcacccttacctta 7791559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 13227876 - 13227940
Alignment:
Q  115 atgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||| |  |||||| ||| |||  |||| ||||||||||||||| ||||||||||||||    
T  13227876 atgttaaatcaaaatcagaagttatataatctataattattgagagttagtctcacccttacctt 13227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 18712818 - 18712858
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||||| ||| ||||||| |||||||||||    
T  18712818 actatgattattgagagatagtctcacccataccttaattc 18712858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 156; Significance: 4e-83; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7721 - 7896
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  7721 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattctcatat 7820  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttac 176  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7821 tcataaacaactacatgttaaatcaatttcagaattcacatacactatgattattgagagttagcctcacccttac 7896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 12335 - 12510
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  12335 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattctcatat 12434  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttac 176  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12435 tcataaacaactacatgttaaatcaatttcagaattcacatacactatgattattgagagttagcctcacccttac 12510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10330 - 10505
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  10330 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattctcatat 10429  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttac 176  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10430 tcataaacaactacatgttaaatcaatttcagaattcacatacactatgattattgagagttagcctcacccttac 10505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 10705602 - 10705784
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10705602 tgattaatttacaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctatattctaaccctaattcccaaat 10705701  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  10705702 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagtcttacccttaccttaatt 10705784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 10919372 - 10919554
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10919372 tgattaatttacaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctatattctaaccctaattcccaaat 10919471  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  10919472 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagtcttacccttaccttaatt 10919554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 14931306 - 14931120
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| |||||||||||||||  |||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  14931306 tgattaatctacaatctaaacatccttaatcatcctaatccatcagattacctacttcttcccgcaattcaattctacattctaaccctaattcccaaat 14931207  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14931206 tcataaacaactacatgttaaatcaatttcagagtttacatatactatgattattgagagttagcctcacccttaccttaattctga 14931120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 3338239 - 3338422
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3338239 tgattaatctacaatctaaacatcctttatcaccttaatccatcagattacctatttcttccaacgattcaattctacattctaaccctaattcccaaat 3338338  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    ||||||||||||||||||||| || ||||||||||| | |||   ||||||||||||||||||||||||||||||||||||||||||    
T  3338339 tcataaacaactacatgttaactcaatttcagaattcatata---tatgattattgagagttagcctcacccttaccttaattctga 3338422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 20898929 - 20898752
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||    
T  20898929 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaaat 20898830  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20898829 tcat-aacaaccacatgttaaatcaatttcagaattcacatacactatgattattgagagttagcctcacccttacctt 20898752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 6512492 - 6512676
Alignment:
Q  1 tgattaatctgcaatc-taaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaa 99  Q
    |||||||||| ||||  |||| ||||| ||||| |||||||||||| |||| ||||||||| | || |||||||||||||||||||||||||||||||||    
T  6512492 tgattaatctacaattataaatatcctttatcatcctaatccatcatattatctacttctttccacaattcaattctacattctaaccctaattcccaaa 6512591  T
Q  100 ttcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6512592 ttcataaacaactacatgttaaatcaattgcagagtttacatacactatgactattgagagttagcctcacccttaccttaattc 6512676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 15991136 - 15991313
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||     
T  15991136 tgattaatctacaatctaaacatcatttatcaccctaatccatcagattatctacttcttccaacgattcaattctacatgctaaccctaattcccaaa- 15991234  T
Q  101 tcataaacaa-ctacatgttaaatccatttcagaatttacatacac-tatgattattgagagttagcctcacccttacc 177  Q
    |||  ||||| |  ||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  15991235 tcaagaacaaccctcatgttaaatcaatttcagaatttacatacacttataattattgaaagttagcctcacccttacc 15991313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15368399 - 15368496
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||    
T  15368399 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccactattcaattctacattctaaccctaattcccaa 15368496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16224248 - 16224345
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||    
T  16224248 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaa 16224345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 13043859 - 13043769
Alignment:
Q  90 aattcccaaattcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||| |||  ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  13043859 aattcccaaaatcaagaacaactacatgttaaatcaatttcagagtttacatacactatgattattgagagttagcatcacccttacctta 13043769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 8711517 - 8711590
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8711517 catgttaaatcaatttcagaatttacatacactatgattattgagagttagcttcacccttaccttaattctga 8711590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15371908 - 15372005
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||| ||| ||||||| ||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||    
T  15371908 tgattaatctacaatctaaacaccctttatcaccttaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaa 15372005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15374200 - 15374297
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaa 98  Q
    |||||||||| ||||||||||||||| ||  ||||||||||||||||||| ||||||||| | || ||||||||||||||| ||||||||||||||||    
T  15374200 tgattaatctacaatctaaacatcctttaaaaccctaatccatcagattatctacttctttccacaattcaattctacattttaaccctaattcccaa 15374297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 15344922 - 15344983
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcaccctta 175  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  15344922 catgttaaatcaatttcagaatttacatacactataattattgaaagttagcctcaccctta 15344983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 15447442 - 15447376
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||  ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  15447442 catgttaaataaatttcagaatttacatacactataattattgaaagttagcctcactcttacctta 15447376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 29856676 - 29856745
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||| |||| ||||| |||||||||||| |||||||  |||||||||||||||||||||||||    
T  29856676 catgttaaatcaattttagaatctacatacactataattattggaagttagcctcacccttaccttaatt 29856745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 27028730 - 27028798
Alignment:
Q  113 acatgttaaa-tccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||| || |||| |||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  27028730 acatgttaaactcaattttagaatttacatacactataaatattgaaagttagcctcacccttacctta 27028798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 13888657 - 13888700
Alignment:
Q  140 atacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  13888657 atacattatgatcattgagagttagcctcacccttaccttaatt 13888700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 8834917 - 8834955
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaattc 184  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  8834917 tatgatcattgagagttagcctcacccttaccttaattc 8834955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 45005943 - 45006003
Alignment:
Q  128 ttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||||||||  ||||||||||||| |||  |||||| |||||||||||||||||| |||||    
T  45005943 ttcagaattta--tacactatgattactgaatgttagcatcacccttaccttaattcagatga 45006003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 183
Target Start/End: Original strand, 15245244 - 15245274
Alignment:
Q  153 attgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||||||||||||||||||||    
T  15245244 attgagagttagcctcacccttaccttaatt 15245274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 17143260 - 17143294
Alignment:
Q  150 attattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  17143260 attattgagagttagtctcacccttaccttaattc 17143294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 13447507 - 13447584
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| |||  ||||||||||| ||||||||||||    
T  13447507 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcactcttaccttaatt 13447584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 15408158 - 15408194
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  15408158 actatgattattgagagatagtctcacccttacctta 15408194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 15747587 - 15747547
Alignment:
Q  150 attattgagagttagcctcacccttaccttaattctgatga 190  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  15747587 attattgagagttagtctcacccttaccttagttttgatga 15747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 18230755 - 18230791
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  18230755 actataatcattgagagttagcctcacccttacctta 18230791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 56114798 - 56114762
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  56114798 actataatcattgagagttagcctcacccttacctta 56114762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 2177 - 1997
Alignment:
Q  3 attaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaattc 102  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| |    
T  2177 attaatctgcaatctaaacatccttaatcaccctaatccatcatattacctacttcttcccacaattcaattctacattctaaccctaattcccaaatcc 2078  T
Q  103 ataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2077 ataaacaactacatgttaaatcaatttcagaatttgcatacactatgattattgagagttagcctcacccttaccttaatt 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 143; Significance: 2e-75; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 52076 - 52254
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||    
T  52076 tgatcaatctacaatctaaacatcctttatcaccctaatccatcatattacctatttcttccaacgattcaattctacatgctaaccctaattctcaaat 52175  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52176 tcataaacaactacatgttaaatcaatttcagaatttacatacactatgattattgagagttagcctcactcttacctt 52254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 25700 - 25521
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| |||||||||||||||  |||||| |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||    
T  25700 tgattaatctacaatctaaacatccttaatcaccataatccatcagattacctacttctacccacaattcaattctacattctaaccctaattcccaaat 25601  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25600 tcataaacaactacatgttaaatcaatttccgaattcacatacactatgattattgagagttagcctcacccttacctta 25521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 139; Significance: 6e-73; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 60296 - 60474
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||    
T  60296 tgattaatctacaatctaaacatcttttatcaccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaattcccaaat 60395  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  60396 tcataaacaactacatgttaaatcaatttcagagtttacatacactatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 204416 - 204346
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  204416 catgttaaatcaatttcagaattcacatacactatgattattgggagttagcctcacccttaccttaattc 204346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 116915 - 116954
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  116915 actatgattattgagagatagtctcacccttaccttaatt 116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 138; Significance: 2e-72; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 3761 - 3949
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaat 100  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||| ||||||||| | || ||||||||||| ||||||||||||||||||||||    
T  3761 tgattaatctacaatctaaacatcccttatcaccctaatccatcagattatctacttctttccacaattcaattctatattctaaccctaattcccaaat 3860  T
Q  101 tcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3861 tcat-aacaaccacatgttaaatcaatttcagaattcacatacactatgattattgagagttagcctcacccttaccttaattctgatga 3949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 40568 - 40532
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  40568 actatgattattgagagatagtctcacccttacctta 40532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 4 - 181
Target Start/End: Original strand, 6920 - 7097
Alignment:
Q  4 ttaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaattca 103  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||    
T  6920 ttaatctacaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattctccatgctaaccctaattccgaaa-tca 7018  T
Q  104 taaacaa-ctacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaa 181  Q
      ||||| |  ||||||||||| |||| ||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  7019 agaacaaccctcatgttaaatcaattttagaatttacatacactatatttattgaaagttagcctcacccttaccttaa 7097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 3759 - 3872
Alignment:
Q  12 caatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaattcataaacaac 111  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||    
T  3759 caatctaaacatcctttatcaccctaatccatcagatcatctacttctttctacaattcaattctacattctaaccctaattcccaaattcataaacaac 3858  T
Q  112 tacatgttaaatcc 125  Q
    ||||||||||||||    
T  3859 tacatgttaaatcc 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3985 - 4080
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattccc 96  Q
    |||||||||| ||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3985 tgattaatcttcaatctaaacatcatttatcaccctaatccatcagattacctacatcttccaacgattcaattctacattctaaccctaattccc 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 163296 - 163386
Alignment:
Q  90 aattcccaaattcataaacaactacatgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||| |||  ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  163296 aattcccaaaatcaagaacaactacatgttaaatcaatttcagagtttacatacactatgattattgagagttagcctcacccttacctta 163386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1058 - 1133
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattct 76  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1058 tgattaatctacaatctaaacatcctttatcaccctaatccatcagattacctacttcttccaacgattcaattct 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17431 - 17336
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattccc 96  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| |||| ||||||||| | || ||||||||||||||||||||||||||||||    
T  17431 tgattaatctacaatctaaacatcctttatcaccctaatccatcatattatctacttctttccacaattcaattctacattctaaccctaattccc 17336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35723 - 35633
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaa 91  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| | || |||||||||||||||||||||||||    
T  35723 tgattattctacaatctaaacatcctttatcaccctaatccatcagattatctacttctttccacaattcaattctacattctaaccctaa 35633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 26048 - 25975
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctga 187  Q
    ||||||||||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  26048 catgttaaatcaatttcagaatctacatacactatgattattggaagttagcctcacccttaccttaattctga 25975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 16282 - 16192
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctacttcttccaacgattcaattctacattctaaccctaa 91  Q
    |||||| ||| ||||||||||||| | ||||||||||||||||||||| | ||||||||| | || |||||||||||||||||||||||||    
T  16282 tgattattctacaatctaaacatcatttatcaccctaatccatcagatcatctacttctttccacaattcaattctacattctaaccctaa 16192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 174173 - 174104
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  174173 catgttaaatcaatttcagaatttacatacactataattattgaaagttagcttcacccttaccttaatt 174104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26002 - 26058
Alignment:
Q  1 tgattaatctgcaatctaaacatcctctatcaccctaatccatcagattacctactt 57  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26002 tgattaatctgcaatctaaacatcctttatcaccctaatccatcagattacctactt 26058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 21971 - 22040
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||  |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  21971 catgttaaatcagtttcagaatttagatacactataattattgaaagttagcctcacccttaccttaatt 22040  T

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Target: scaffold0175 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 18832 - 18899
Alignment:
Q  113 acatgttaaa-tccatttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  18832 acatgttaaactcaatttcagaatttacatacactataattattgaaagttagcctcacccttacctt 18899  T

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Target: scaffold0956 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 2160 - 2091
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||| |||||| |||||| ||| ||||| |||||||| |||||| ||||||||||||||||||    
T  2160 catgttaaatcaatttcaaaatttatatagactataattattgaaagttagtctcacccttaccttaatt 2091  T

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Target: scaffold0331 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 4708 - 4757
Alignment:
Q  130 cagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  4708 cagaatttacatacactataattattgaaagttagcctcacccttacctt 4757  T

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Target: scaffold0490 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 5859 - 5943
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||| ||||||||||||   | |||||||||||  |||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  5859 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattattgaatgttagcctcacccttaccttaattcagatga 5943  T

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Target: scaffold0256 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 1991 - 1890
Alignment:
Q  36 taatccatcagattacctacttcttccaacgattcaattctacattctaaccctaattcccaaattcataaacaactacatgttaaa-tccatttcagaa 134  Q
    |||| |||||||||| |||||||||||||| ||  |||  |  | |||||||||||||||||||| | |||||||| |||||||||| || |||||||||    
T  1991 taattcatcagattatctacttcttccaacaatctaatcttcaaatctaaccctaattcccaaatccctaaacaacaacatgttaaattcaatttcagaa 1892  T
Q  135 tt 136  Q
    ||    
T  1891 tt 1890  T

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Target: scaffold0338 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 229 - 289
Alignment:
Q  121 aatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaa 181  Q
    |||| ||||||||||| ||||||| ||| |||||||| |||||| ||||||||||||||||    
T  229 aatcaatttcagaattcacatacagtataattattgaaagttagtctcacccttaccttaa 289  T

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Target: scaffold0309 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 9115 - 9199
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| |||  ||||||||||||||||||||||||| |||||    
T  9115 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcacccttaccttaattcagatga 9199  T

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Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 12318 - 12355
Alignment:
Q  146 tatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||| |||||||||||||||||||||||||||||||    
T  12318 tatgatcattgagagttagcctcacccttaccttaatt 12355  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 121931 - 121968
Alignment:
Q  153 attgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||||||||||||||||||||||||||||| |||||    
T  121931 attgagagttagcctcacccttaccttaattcagatga 121968  T

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Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 132807 - 132844
Alignment:
Q  153 attgagagttagcctcacccttaccttaattctgatga 190  Q
    |||||||||||||||||||||||||||||||| |||||    
T  132807 attgagagttagcctcacccttaccttaattcagatga 132844  T

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Target: scaffold0222 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 16839 - 16879
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  16839 actatgattattgagagatagtctcacccttaccttaattc 16879  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 79125 - 79089
Alignment:
Q  147 atgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||| |||||||||||||||||||||||||||||||    
T  79125 atgatcattgagagttagcctcacccttaccttaatt 79089  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 101964 - 101924
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  101964 actatgattattgagagatagtctcacccttaccttaattc 101924  T

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Target: scaffold0815 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 1440 - 1507
Alignment:
Q  114 catgttaaatccatttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||| | ||||||||| |||  |||| || ||| |||||||||||| ||||||||||||||||||    
T  1440 catgttaaaacaatttcagaaatta--tacattaagatcattgagagttagtctcacccttaccttaatt 1507  T

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Target: scaffold0335 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 183
Target Start/End: Complemental strand, 2655 - 2625
Alignment:
Q  153 attgagagttagcctcacccttaccttaatt 183  Q
    |||||||||||||||||||||||||||||||    
T  2655 attgagagttagcctcacccttaccttaatt 2625  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 11651 - 11685
Alignment:
Q  150 attattgagagttagcctcacccttaccttaattc 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  11651 attattgagagttagtctcacccttaccttaattc 11685  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 22141 - 22095
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaattctgatga 190  Q
    ||||| || ||||||||||||||||| |||||||||||||| |||||    
T  22141 actataatcattgagagttagcctcatccttaccttaattcagatga 22095  T

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Target: scaffold0720 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 515 - 442
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttacctt 179  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| |||  ||||||||||||||||||||    
T  515 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcacccttacctt 442  T

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Target: scaffold0422 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 3962 - 4012
Alignment:
Q  128 ttcagaatttacatacactatgattattgagagttagcctcacccttacctta 180  Q
    |||||||||||  |||||||||||||||||  ||||| |||||||||||||||    
T  3962 ttcagaattta--tacactatgattattgaatgttagtctcacccttacctta 4012  T

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Target: scaffold0388 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 15141 - 15104
Alignment:
Q  144 actatgattattgagagttagcctcacccttaccttaa 181  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  15141 actataattattgagagttagcctcacgcttaccttaa 15104  T

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Target: scaffold0298 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 623 - 656
Alignment:
Q  150 attattgagagttagcctcacccttaccttaatt 183  Q
    ||||||||||||||| ||||||||||||||||||    
T  623 attattgagagttagtctcacccttaccttaatt 656  T

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Target: scaffold0169 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 7004 - 7041
Alignment:
Q  153 attgagagttagcctcacccttaccttaattctgatga 190  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  7004 attgagagttagcctcacccttatcttaattcagatga 7041  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 1341 - 1264
Alignment:
Q  106 aacaactacatgttaaatcc--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttaatt 183  Q
    |||||| ||||||||||||   | |||||||||||  ||||||||||||| | |  ||||||||||||||||||||||||    
T  1341 aacaacaacatgttaaatcataaattcagaattta--tacactatgattactaaatgttagcctcacccttaccttaatt 1264  T

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Target: scaffold0096 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 39541 - 39508
Alignment:
Q  146 tatgattattgagagttagcctcacccttacctt 179  Q
    |||||| |||||||||||||||||||||||||||    
T  39541 tatgatcattgagagttagcctcacccttacctt 39508  T

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Target: scaffold1276 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 1154 - 1190
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  1154 actataatcattgagagttagcctcacccttacctta 1190  T

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Target: scaffold0599 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 1087 - 1123
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||| || ||||||||||||||||||||||||||||    
T  1087 actataatcattgagagttagcctcacccttacctta 1123  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 135492 - 135528
Alignment:
Q  144 actatgattattgagagttagcctcacccttacctta 180  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  135492 actatgattattgagagatagtctcacccttacctta 135528  T

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