View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12993_low_13 (Length: 369)

Name: NF12993_low_13
Description: NF12993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12993_low_13
NF12993_low_13
[»] chr2 (37 HSPs)
chr2 (225-338)||(45528878-45528991)
chr2 (225-356)||(30211861-30211992)
chr2 (225-337)||(45676812-45676924)
chr2 (225-351)||(24674857-24674983)
chr2 (225-338)||(23138405-23138518)
chr2 (232-338)||(11358836-11358942)
chr2 (232-338)||(1063123-1063229)
chr2 (232-338)||(20832357-20832463)
chr2 (232-338)||(31830030-31830136)
chr2 (225-338)||(23550195-23550308)
chr2 (236-338)||(23086829-23086931)
chr2 (225-338)||(9609504-9609617)
chr2 (225-338)||(16924628-16924741)
chr2 (225-338)||(16981520-16981633)
chr2 (225-338)||(16998368-16998481)
chr2 (225-338)||(17063085-17063198)
chr2 (225-338)||(24709401-24709514)
chr2 (225-338)||(24833535-24833648)
chr2 (225-338)||(27370637-27370750)
chr2 (232-338)||(27217391-27217497)
chr2 (225-338)||(10868218-10868331)
chr2 (225-338)||(24261738-24261851)
chr2 (225-338)||(41609306-41609419)
chr2 (258-338)||(22757425-22757505)
chr2 (225-338)||(21326228-21326341)
chr2 (225-338)||(23061667-23061780)
chr2 (232-337)||(23265590-23265695)
chr2 (225-310)||(27385700-27385785)
chr2 (246-338)||(44379861-44379953)
chr2 (246-338)||(44386531-44386623)
chr2 (232-338)||(27366041-27366147)
chr2 (241-338)||(23188392-23188489)
chr2 (241-338)||(23599655-23599752)
chr2 (232-301)||(24653720-24653789)
chr2 (241-302)||(22325840-22325901)
chr2 (232-301)||(23293333-23293402)
chr2 (241-338)||(21145993-21146090)
[»] chr5 (43 HSPs)
chr5 (224-338)||(21404504-21404618)
chr5 (225-351)||(26739296-26739422)
chr5 (225-338)||(20468698-20468811)
chr5 (226-337)||(23470899-23471010)
chr5 (232-338)||(21564556-21564662)
chr5 (225-338)||(21343962-21344075)
chr5 (232-338)||(14887598-14887704)
chr5 (246-338)||(22502351-22502443)
chr5 (246-338)||(24736215-24736307)
chr5 (246-338)||(24737389-24737481)
chr5 (246-338)||(24750158-24750250)
chr5 (246-337)||(37546105-37546196)
chr5 (232-338)||(20341937-20342043)
chr5 (232-338)||(21662643-21662749)
chr5 (232-338)||(23080693-23080799)
chr5 (225-338)||(16356171-16356284)
chr5 (225-338)||(22134337-22134450)
chr5 (225-338)||(22333491-22333604)
chr5 (225-338)||(27518076-27518189)
chr5 (225-338)||(34566163-34566276)
chr5 (225-338)||(40708449-40708562)
chr5 (225-337)||(20573190-20573302)
chr5 (232-334)||(24799008-24799110)
chr5 (252-338)||(25847750-25847836)
chr5 (232-338)||(27686004-27686110)
chr5 (225-338)||(15000343-15000456)
chr5 (232-337)||(21625194-21625299)
chr5 (225-338)||(21984909-21985022)
chr5 (225-338)||(22344775-22344888)
chr5 (225-338)||(27669094-27669207)
chr5 (225-338)||(29476677-29476790)
chr5 (225-338)||(37292100-37292213)
chr5 (225-338)||(41770511-41770624)
chr5 (246-338)||(27610044-27610136)
chr5 (232-338)||(22380857-22380963)
chr5 (225-321)||(18775446-18775542)
chr5 (241-337)||(26681925-26682021)
chr5 (241-337)||(26953532-26953628)
chr5 (225-338)||(19769629-19769742)
chr5 (267-328)||(17269947-17270008)
chr5 (232-337)||(21496291-21496396)
chr5 (241-301)||(23442934-23442994)
chr5 (232-301)||(6403189-6403258)
[»] scaffold1434 (1 HSPs)
scaffold1434 (225-356)||(846-977)
[»] scaffold0004 (4 HSPs)
scaffold0004 (226-338)||(111790-111902)
scaffold0004 (232-338)||(203893-203999)
scaffold0004 (241-300)||(385603-385662)
scaffold0004 (232-302)||(117345-117415)
[»] scaffold0035 (2 HSPs)
scaffold0035 (225-338)||(38622-38735)
scaffold0035 (229-356)||(43283-43410)
[»] scaffold0125 (1 HSPs)
scaffold0125 (224-356)||(17597-17729)
[»] chr7 (38 HSPs)
chr7 (225-356)||(21661690-21661821)
chr7 (225-338)||(15203605-15203718)
chr7 (225-338)||(12254469-12254582)
chr7 (225-338)||(14347563-14347676)
chr7 (225-338)||(15163852-15163965)
chr7 (232-338)||(8212540-8212646)
chr7 (232-338)||(11306675-11306781)
chr7 (246-338)||(11388836-11388928)
chr7 (232-338)||(26118993-26119099)
chr7 (232-338)||(49152032-49152138)
chr7 (225-338)||(17747-17860)
chr7 (232-337)||(6413245-6413350)
chr7 (225-338)||(8707331-8707444)
chr7 (225-338)||(11237644-11237757)
chr7 (225-338)||(11553533-11553646)
chr7 (225-338)||(14037533-14037646)
chr7 (225-338)||(14332123-14332236)
chr7 (225-338)||(15161488-15161601)
chr7 (225-338)||(18552189-18552302)
chr7 (225-338)||(23517200-23517313)
chr7 (226-338)||(13634152-13634264)
chr7 (232-338)||(12455437-12455543)
chr7 (225-338)||(13685789-13685902)
chr7 (225-338)||(44791782-44791895)
chr7 (246-338)||(10870742-10870834)
chr7 (232-338)||(12207209-12207315)
chr7 (225-338)||(8198354-8198467)
chr7 (232-337)||(15340230-15340335)
chr7 (232-337)||(16950881-16950986)
chr7 (232-328)||(13021090-13021186)
chr7 (232-301)||(13665301-13665370)
chr7 (267-337)||(14286786-14286856)
chr7 (232-337)||(14129607-14129712)
chr7 (232-337)||(14433425-14433530)
chr7 (232-337)||(16072708-16072813)
chr7 (232-337)||(26288446-26288551)
chr7 (246-337)||(1817-1908)
chr7 (225-273)||(15624492-15624540)
[»] scaffold0058 (2 HSPs)
scaffold0058 (235-337)||(59198-59300)
scaffold0058 (232-337)||(18895-19000)
[»] scaffold0877 (1 HSPs)
scaffold0877 (225-338)||(685-798)
[»] scaffold0005 (4 HSPs)
scaffold0005 (225-338)||(165134-165247)
scaffold0005 (225-338)||(308427-308540)
scaffold0005 (232-337)||(260083-260188)
scaffold0005 (267-337)||(279256-279326)
[»] chr4 (37 HSPs)
chr4 (225-338)||(14652045-14652158)
chr4 (225-338)||(14851528-14851641)
chr4 (232-338)||(20890727-20890833)
chr4 (227-338)||(14927421-14927532)
chr4 (232-338)||(3265219-3265325)
chr4 (232-338)||(29453962-29454068)
chr4 (232-338)||(11207656-11207762)
chr4 (232-338)||(15415401-15415507)
chr4 (225-338)||(8386149-8386262)
chr4 (225-338)||(14304139-14304252)
chr4 (225-338)||(14680304-14680417)
chr4 (225-338)||(18296942-18297055)
chr4 (225-338)||(23955484-23955597)
chr4 (225-338)||(29039566-29039679)
chr4 (226-338)||(12476338-12476450)
chr4 (232-338)||(33222662-33222768)
chr4 (232-338)||(44662288-44662394)
chr4 (225-338)||(8053785-8053898)
chr4 (225-338)||(12523413-12523526)
chr4 (225-338)||(14267061-14267174)
chr4 (225-338)||(15364123-15364236)
chr4 (225-338)||(19778955-19779068)
chr4 (225-338)||(27711073-27711186)
chr4 (225-338)||(40472777-40472890)
chr4 (241-337)||(15352049-15352145)
chr4 (225-337)||(16355608-16355720)
chr4 (267-338)||(1649699-1649770)
chr4 (267-338)||(14159271-14159342)
chr4 (225-323)||(18608007-18608105)
chr4 (241-338)||(7090216-7090313)
chr4 (232-301)||(15003823-15003892)
chr4 (225-310)||(18227636-18227721)
chr4 (241-337)||(15319337-15319432)
chr4 (246-301)||(18164594-18164649)
chr4 (232-337)||(15359480-15359585)
chr4 (241-337)||(15070166-15070262)
chr4 (232-300)||(15245668-15245736)
[»] scaffold0730 (1 HSPs)
scaffold0730 (225-338)||(6015-6128)
[»] scaffold0411 (1 HSPs)
scaffold0411 (225-338)||(15504-15617)
[»] scaffold0007 (1 HSPs)
scaffold0007 (253-338)||(86929-87014)
[»] chr3 (49 HSPs)
chr3 (225-338)||(15247203-15247316)
chr3 (225-356)||(15016195-15016326)
chr3 (225-336)||(15208247-15208358)
chr3 (225-338)||(320589-320702)
chr3 (225-337)||(12497604-12497716)
chr3 (232-338)||(31944845-31944951)
chr3 (225-337)||(16370770-16370881)
chr3 (226-337)||(14877161-14877272)
chr3 (232-338)||(31689273-31689379)
chr3 (225-338)||(16635129-16635242)
chr3 (225-338)||(43162453-43162566)
chr3 (225-338)||(48424803-48424916)
chr3 (246-338)||(6600124-6600216)
chr3 (225-337)||(9514100-9514212)
chr3 (225-337)||(9522075-9522187)
chr3 (232-338)||(15227022-15227128)
chr3 (232-338)||(16330309-16330415)
chr3 (225-338)||(10004956-10005069)
chr3 (225-338)||(10905566-10905679)
chr3 (225-338)||(13252046-13252159)
chr3 (225-338)||(14974221-14974334)
chr3 (225-338)||(15403171-15403284)
chr3 (225-338)||(15590053-15590166)
chr3 (225-338)||(17489206-17489319)
chr3 (225-338)||(20062715-20062828)
chr3 (225-338)||(26793060-26793173)
chr3 (246-338)||(16757246-16757338)
chr3 (246-338)||(53385679-53385771)
chr3 (255-338)||(11961684-11961767)
chr3 (272-338)||(10383379-10383445)
chr3 (232-338)||(16338710-16338816)
chr3 (225-323)||(16691516-16691614)
chr3 (225-323)||(16810730-16810828)
chr3 (241-338)||(15348906-15349003)
chr3 (241-338)||(15725594-15725691)
chr3 (226-338)||(16492842-16492954)
chr3 (232-338)||(13972770-13972876)
chr3 (232-338)||(14086046-14086152)
chr3 (225-338)||(11297184-11297297)
chr3 (232-338)||(13323302-13323408)
chr3 (232-337)||(16381578-16381683)
chr3 (249-338)||(16807587-16807676)
chr3 (225-297)||(11852919-11852991)
chr3 (232-300)||(12478398-12478466)
chr3 (241-303)||(12854543-12854604)
chr3 (232-301)||(14571221-14571290)
chr3 (232-337)||(16837155-16837260)
chr3 (225-277)||(6609816-6609868)
chr3 (232-300)||(11304461-11304529)
[»] scaffold0379 (1 HSPs)
scaffold0379 (225-338)||(13402-13515)
[»] chr6 (45 HSPs)
chr6 (225-338)||(19167362-19167475)
chr6 (225-338)||(27332000-27332113)
chr6 (225-338)||(27392740-27392853)
chr6 (232-338)||(24364020-24364126)
chr6 (225-338)||(23078070-23078183)
chr6 (232-338)||(21564699-21564805)
chr6 (241-334)||(25610432-25610525)
chr6 (232-338)||(1640404-1640510)
chr6 (225-338)||(2875370-2875483)
chr6 (225-338)||(16550728-16550841)
chr6 (225-338)||(16627284-16627397)
chr6 (232-337)||(17025873-17025978)
chr6 (225-338)||(24313735-24313848)
chr6 (225-338)||(29592487-29592600)
chr6 (225-337)||(16963935-16964047)
chr6 (232-338)||(18794298-18794404)
chr6 (225-338)||(1543651-1543764)
chr6 (225-338)||(18408510-18408623)
chr6 (225-310)||(19864315-19864400)
chr6 (232-337)||(21471209-21471314)
chr6 (232-337)||(21833549-21833654)
chr6 (225-338)||(22433598-22433711)
chr6 (246-351)||(28292926-28293031)
chr6 (225-337)||(16928208-16928320)
chr6 (246-338)||(28263764-28263856)
chr6 (246-338)||(28342513-28342605)
chr6 (246-337)||(27187058-27187149)
chr6 (246-337)||(27262091-27262182)
chr6 (241-338)||(18198100-18198197)
chr6 (225-338)||(22079225-22079338)
chr6 (225-338)||(25112153-25112266)
chr6 (232-337)||(25765857-25765962)
chr6 (232-301)||(8766752-8766821)
chr6 (225-338)||(17032163-17032276)
chr6 (225-338)||(22763022-22763134)
chr6 (225-337)||(12497627-12497739)
chr6 (225-337)||(12511162-12511274)
chr6 (255-338)||(10469416-10469498)
chr6 (232-303)||(25750417-25750488)
chr6 (261-338)||(5839786-5839863)
chr6 (232-338)||(11288165-11288271)
chr6 (225-287)||(18932413-18932475)
chr6 (232-338)||(19878906-19879012)
chr6 (232-301)||(18787496-18787565)
chr6 (225-338)||(28949192-28949305)
[»] scaffold0359 (1 HSPs)
scaffold0359 (226-338)||(16756-16868)
[»] scaffold0012 (2 HSPs)
scaffold0012 (232-338)||(228818-228924)
scaffold0012 (241-338)||(219842-219939)
[»] scaffold0001 (3 HSPs)
scaffold0001 (225-338)||(447827-447940)
scaffold0001 (225-338)||(161881-161994)
scaffold0001 (232-303)||(91387-91458)
[»] chr8 (47 HSPs)
chr8 (225-338)||(23948692-23948805)
chr8 (225-338)||(20396990-20397103)
chr8 (225-338)||(21250745-21250858)
chr8 (225-338)||(22179423-22179536)
chr8 (232-338)||(22433124-22433230)
chr8 (225-338)||(19900347-19900460)
chr8 (232-338)||(804541-804647)
chr8 (232-338)||(6603465-6603571)
chr8 (232-338)||(6678918-6679024)
chr8 (232-338)||(14564949-14565055)
chr8 (232-338)||(16265483-16265589)
chr8 (232-338)||(20387923-20388029)
chr8 (232-338)||(27347033-27347139)
chr8 (225-338)||(21167402-21167515)
chr8 (241-338)||(21394730-21394827)
chr8 (241-338)||(21789223-21789320)
chr8 (225-338)||(21922600-21922713)
chr8 (232-337)||(28982164-28982269)
chr8 (232-337)||(28987384-28987489)
chr8 (246-338)||(12304582-12304674)
chr8 (246-338)||(12912836-12912928)
chr8 (225-338)||(19485735-19485848)
chr8 (225-338)||(20018615-20018728)
chr8 (225-338)||(22121039-22121152)
chr8 (232-337)||(29304292-29304397)
chr8 (225-337)||(16408911-16409023)
chr8 (225-323)||(22165071-22165169)
chr8 (225-338)||(19112493-19112606)
chr8 (225-338)||(19977770-19977883)
chr8 (267-336)||(22062249-22062318)
chr8 (225-321)||(32599947-32600043)
chr8 (246-337)||(22179008-22179099)
chr8 (225-323)||(15440984-15441082)
chr8 (225-323)||(15533183-15533281)
chr8 (232-338)||(22031842-22031948)
chr8 (225-338)||(17674888-17675001)
chr8 (225-338)||(22046177-22046290)
chr8 (232-303)||(20010800-20010871)
chr8 (232-337)||(19851221-19851326)
chr8 (232-337)||(19857257-19857362)
chr8 (232-301)||(20007660-20007729)
chr8 (294-338)||(22987073-22987117)
chr8 (241-337)||(30314010-30314106)
chr8 (225-331)||(22133913-22134019)
chr8 (232-301)||(21325312-21325381)
chr8 (232-337)||(31417340-31417445)
chr8 (232-295)||(20972718-20972781)
[»] chr1 (25 HSPs)
chr1 (225-338)||(20136530-20136643)
chr1 (246-338)||(19761360-19761452)
chr1 (232-338)||(50612910-50613016)
chr1 (232-338)||(50620738-50620844)
chr1 (232-338)||(20294171-20294277)
chr1 (232-334)||(31550679-31550781)
chr1 (232-338)||(37676835-37676941)
chr1 (225-338)||(16351093-16351206)
chr1 (232-337)||(20243959-20244064)
chr1 (225-338)||(21747287-21747400)
chr1 (225-338)||(21836702-21836815)
chr1 (225-338)||(41354963-41355076)
chr1 (225-338)||(51333987-51334100)
chr1 (233-337)||(20249610-20249714)
chr1 (225-337)||(21163032-21163144)
chr1 (232-351)||(20075543-20075662)
chr1 (225-338)||(19106119-19106232)
chr1 (241-338)||(33391523-33391620)
chr1 (246-338)||(20395490-20395582)
chr1 (225-338)||(21830055-21830168)
chr1 (246-337)||(22433611-22433702)
chr1 (225-338)||(16079127-16079240)
chr1 (240-337)||(19665371-19665468)
chr1 (232-301)||(21736512-21736581)
chr1 (246-337)||(20940558-20940649)
[»] scaffold1832 (1 HSPs)
scaffold1832 (225-338)||(1065-1178)
[»] scaffold0396 (1 HSPs)
scaffold0396 (225-338)||(3800-3913)
[»] scaffold0282 (1 HSPs)
scaffold0282 (225-338)||(16841-16954)
[»] scaffold0234 (1 HSPs)
scaffold0234 (225-338)||(25496-25609)
[»] scaffold0165 (2 HSPs)
scaffold0165 (225-338)||(26346-26459)
scaffold0165 (241-337)||(961-1057)
[»] scaffold0037 (1 HSPs)
scaffold0037 (225-338)||(117330-117443)
[»] scaffold0010 (3 HSPs)
scaffold0010 (225-338)||(1990-2103)
scaffold0010 (232-286)||(42810-42864)
scaffold0010 (232-286)||(47876-47930)
[»] scaffold0138 (1 HSPs)
scaffold0138 (227-338)||(16890-17001)
[»] scaffold0198 (1 HSPs)
scaffold0198 (225-338)||(27735-27848)
[»] scaffold0180 (1 HSPs)
scaffold0180 (225-338)||(33177-33290)
[»] scaffold0106 (1 HSPs)
scaffold0106 (225-338)||(13807-13920)
[»] scaffold0100 (1 HSPs)
scaffold0100 (225-338)||(26144-26257)
[»] scaffold0042 (2 HSPs)
scaffold0042 (225-338)||(40214-40327)
scaffold0042 (225-338)||(65174-65287)
[»] scaffold0040 (1 HSPs)
scaffold0040 (241-338)||(14661-14758)
[»] scaffold0022 (1 HSPs)
scaffold0022 (225-338)||(127624-127737)
[»] scaffold0020 (1 HSPs)
scaffold0020 (225-338)||(179985-180098)
[»] scaffold0089 (1 HSPs)
scaffold0089 (232-338)||(17138-17244)
[»] scaffold0761 (1 HSPs)
scaffold0761 (225-338)||(5034-5147)
[»] scaffold0737 (1 HSPs)
scaffold0737 (225-338)||(407-520)
[»] scaffold0476 (1 HSPs)
scaffold0476 (225-338)||(9111-9224)
[»] scaffold0358 (1 HSPs)
scaffold0358 (225-338)||(6041-6154)
[»] scaffold0333 (1 HSPs)
scaffold0333 (225-338)||(15261-15374)
[»] scaffold0220 (1 HSPs)
scaffold0220 (233-338)||(1247-1352)
[»] scaffold0114 (4 HSPs)
scaffold0114 (225-338)||(32153-32266)
scaffold0114 (246-337)||(35844-35935)
scaffold0114 (246-337)||(19911-20002)
scaffold0114 (246-337)||(43294-43385)
[»] scaffold0060 (1 HSPs)
scaffold0060 (232-337)||(42558-42663)
[»] scaffold0031 (1 HSPs)
scaffold0031 (225-338)||(64456-64569)
[»] scaffold0028 (5 HSPs)
scaffold0028 (225-338)||(2552-2665)
scaffold0028 (225-338)||(42922-43035)
scaffold0028 (225-338)||(62057-62170)
scaffold0028 (225-338)||(8253-8366)
scaffold0028 (232-338)||(50939-51045)
[»] scaffold0069 (1 HSPs)
scaffold0069 (246-338)||(39315-39407)
[»] scaffold0413 (1 HSPs)
scaffold0413 (226-337)||(774-885)
[»] scaffold0962 (1 HSPs)
scaffold0962 (232-338)||(115-221)
[»] scaffold0206 (1 HSPs)
scaffold0206 (232-338)||(30686-30792)
[»] scaffold0113 (2 HSPs)
scaffold0113 (232-338)||(16451-16557)
scaffold0113 (232-286)||(26342-26396)
[»] scaffold0009 (1 HSPs)
scaffold0009 (240-338)||(248396-248494)
[»] scaffold0894 (1 HSPs)
scaffold0894 (225-338)||(907-1020)
[»] scaffold0676 (1 HSPs)
scaffold0676 (225-338)||(5782-5895)
[»] scaffold0507 (1 HSPs)
scaffold0507 (241-338)||(6761-6858)
[»] scaffold0084 (1 HSPs)
scaffold0084 (225-338)||(4989-5102)
[»] scaffold0044 (2 HSPs)
scaffold0044 (225-338)||(14128-14241)
scaffold0044 (225-338)||(388-501)
[»] scaffold0161 (1 HSPs)
scaffold0161 (226-338)||(1118-1230)
[»] scaffold0023 (2 HSPs)
scaffold0023 (226-338)||(37171-37283)
scaffold0023 (232-337)||(19164-19269)
[»] scaffold0320 (1 HSPs)
scaffold0320 (232-338)||(2367-2473)
[»] scaffold0120 (1 HSPs)
scaffold0120 (225-335)||(10699-10809)
[»] scaffold0093 (2 HSPs)
scaffold0093 (232-338)||(26036-26142)
scaffold0093 (232-321)||(36704-36793)
[»] scaffold0074 (1 HSPs)
scaffold0074 (272-338)||(2955-3021)
[»] scaffold1355 (1 HSPs)
scaffold1355 (225-338)||(444-557)
[»] scaffold0431 (1 HSPs)
scaffold0431 (225-338)||(7145-7258)
[»] scaffold0324 (1 HSPs)
scaffold0324 (225-338)||(16725-16838)
[»] scaffold1243 (1 HSPs)
scaffold1243 (276-344)||(262-330)
[»] scaffold0546 (1 HSPs)
scaffold0546 (225-337)||(4831-4943)
[»] scaffold0518 (1 HSPs)
scaffold0518 (267-351)||(10634-10718)
[»] scaffold0109 (2 HSPs)
scaffold0109 (225-337)||(8364-8476)
scaffold0109 (225-338)||(33998-34111)
[»] scaffold0052 (1 HSPs)
scaffold0052 (225-328)||(11685-11788)
[»] scaffold0064 (3 HSPs)
scaffold0064 (252-338)||(29194-29280)
scaffold0064 (252-338)||(41185-41271)
scaffold0064 (225-277)||(63385-63437)
[»] scaffold0454 (1 HSPs)
scaffold0454 (225-338)||(6706-6819)
[»] scaffold0249 (1 HSPs)
scaffold0249 (232-337)||(5428-5533)
[»] scaffold0026 (2 HSPs)
scaffold0026 (232-337)||(36977-37082)
scaffold0026 (298-338)||(26683-26723)
[»] scaffold0459 (1 HSPs)
scaffold0459 (246-338)||(203-295)
[»] scaffold0130 (1 HSPs)
scaffold0130 (232-338)||(11164-11270)
[»] scaffold0104 (1 HSPs)
scaffold0104 (232-338)||(303-409)
[»] scaffold0076 (1 HSPs)
scaffold0076 (232-338)||(34102-34208)
[»] scaffold0924 (1 HSPs)
scaffold0924 (232-301)||(3666-3735)
[»] scaffold0600 (1 HSPs)
scaffold0600 (232-337)||(1184-1289)
[»] scaffold0158 (1 HSPs)
scaffold0158 (246-351)||(15755-15860)
[»] scaffold0126 (1 HSPs)
scaffold0126 (232-301)||(45619-45688)
[»] scaffold0124 (2 HSPs)
scaffold0124 (232-337)||(825-930)
scaffold0124 (232-301)||(10663-10732)
[»] scaffold0034 (2 HSPs)
scaffold0034 (232-301)||(5380-5449)
scaffold0034 (232-337)||(14332-14437)
[»] scaffold0947 (1 HSPs)
scaffold0947 (232-300)||(2894-2962)
[»] scaffold0395 (1 HSPs)
scaffold0395 (241-337)||(6325-6421)
[»] scaffold0323 (1 HSPs)
scaffold0323 (232-300)||(8668-8736)
[»] scaffold0011 (3 HSPs)
scaffold0011 (232-303)||(196144-196215)
scaffold0011 (232-286)||(148370-148424)
scaffold0011 (225-277)||(36831-36883)
[»] scaffold0483 (1 HSPs)
scaffold0483 (232-338)||(10508-10614)
[»] scaffold0403 (1 HSPs)
scaffold0403 (226-300)||(6184-6258)
[»] scaffold0585 (1 HSPs)
scaffold0585 (232-301)||(7498-7567)
[»] scaffold0574 (1 HSPs)
scaffold0574 (232-337)||(4565-4670)
[»] scaffold0298 (1 HSPs)
scaffold0298 (232-301)||(19758-19827)
[»] scaffold0239 (1 HSPs)
scaffold0239 (232-337)||(13207-13312)
[»] scaffold0235 (1 HSPs)
scaffold0235 (232-301)||(22138-22207)
[»] scaffold0156 (1 HSPs)
scaffold0156 (232-301)||(27001-27070)
[»] scaffold0056 (1 HSPs)
scaffold0056 (241-310)||(12764-12833)
[»] scaffold0682 (1 HSPs)
scaffold0682 (267-338)||(1-72)
[»] scaffold0222 (1 HSPs)
scaffold0222 (246-301)||(3730-3785)
[»] scaffold0203 (2 HSPs)
scaffold0203 (246-301)||(14713-14768)
scaffold0203 (246-286)||(9354-9394)
[»] scaffold0177 (1 HSPs)
scaffold0177 (281-336)||(17762-17817)
[»] scaffold0149 (1 HSPs)
scaffold0149 (232-303)||(13649-13720)
[»] scaffold0029 (1 HSPs)
scaffold0029 (255-338)||(112357-112440)
[»] scaffold1550 (1 HSPs)
scaffold1550 (225-303)||(2-80)
[»] scaffold0071 (1 HSPs)
scaffold0071 (267-337)||(49633-49703)
[»] scaffold1032 (1 HSPs)
scaffold1032 (232-301)||(2327-2396)
[»] scaffold0556 (1 HSPs)
scaffold0556 (232-301)||(3689-3758)
[»] scaffold0309 (1 HSPs)
scaffold0309 (232-301)||(9573-9642)
[»] scaffold0301 (1 HSPs)
scaffold0301 (232-301)||(4625-4694)
[»] scaffold0244 (1 HSPs)
scaffold0244 (232-301)||(1198-1267)
[»] scaffold0053 (1 HSPs)
scaffold0053 (232-337)||(49459-49563)
[»] scaffold0049 (1 HSPs)
scaffold0049 (232-301)||(52325-52394)
[»] scaffold0039 (1 HSPs)
scaffold0039 (267-328)||(96177-96238)
[»] scaffold0019 (1 HSPs)
scaffold0019 (232-337)||(135894-135999)
[»] scaffold0217 (1 HSPs)
scaffold0217 (225-257)||(29125-29157)
[»] scaffold0101 (1 HSPs)
scaffold0101 (225-277)||(7689-7741)
[»] scaffold0003 (1 HSPs)
scaffold0003 (232-332)||(194668-194768)


Alignment Details
Target: chr2 (Bit Score: 106; Significance: 6e-53; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 45528878 - 45528991
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45528878 gaaaatgtacctcattcaaataactctggatacgactccagcatcttactctctaactcccacatcaaactttcaccagccgctccttcccaaacgactt 45528977  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  45528978 tcacaagaggtatc 45528991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 356
Target Start/End: Complemental strand, 30211992 - 30211861
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  30211992 gaaaatgtacctcattcaaataactctggatacaactccaacatcttgctctccaactctcacgtcaaactttcaccagccgctcctccccaaacgactt 30211893  T
Q  325 tcacaagaggtatccgctttcccctcagcttc 356  Q
    ||||||||||||||  ||| || |||||||||    
T  30211892 tcacaagaggtatctccttgcctctcagcttc 30211861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 45676924 - 45676812
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||| ||||||||||||||| |||||| ||||||||||||     
T  45676924 gaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaaactttcaccagtcgctccgtcccaaacgactc 45676825  T
Q  325 tcacaagaggtat 337  Q
    ||||||| |||||    
T  45676824 tcacaaggggtat 45676812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 225 - 351
Target Start/End: Original strand, 24674857 - 24674983
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  24674857 gaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactc 24674956  T
Q  325 tcacaagaggtatccgctttcccctca 351  Q
    ||||||| ||||||  ||| |||||||    
T  24674957 tcacaaggggtatctccttgcccctca 24674983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 23138405 - 23138518
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || |||||||||| |||||||||||||||||||     
T  23138405 gaaaatttacctcatgcaaacaactctggatatgattccagcatcttactctctagctcccacgttaagctttcaccagtcgctccttcccaaacgactc 23138504  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  23138505 tcacaagaggtatc 23138518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 11358942 - 11358836
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||||||||||  ||||||||||| |||||||    
T  11358942 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaag 11358843  T
Q  332 aggtatc 338  Q
    |||||||    
T  11358842 aggtatc 11358836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 1063123 - 1063229
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  1063123 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 1063222  T
Q  332 aggtatc 338  Q
    |||||||    
T  1063223 aggtatc 1063229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 20832357 - 20832463
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||| ||||||||| ||||||  ||||||||||||||||||||||  ||||||||||| |||||||    
T  20832357 tacctcaagcaaacaactccggatacgactcccgcatcctactctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaag 20832456  T
Q  332 aggtatc 338  Q
    |||||||    
T  20832457 aggtatc 20832463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 31830030 - 31830136
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  31830030 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 31830129  T
Q  332 aggtatc 338  Q
    |||||||    
T  31830130 aggtatc 31830136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 23550195 - 23550308
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||  ||||||||||| |  |||||| | || |||||||||| |||||||||||||||||||     
T  23550195 gaaaatttacctcatgcaaacaactctggatatgattccatcatcttactctctatttcccacgttaagctttcaccagtcgctccttcccaaacgactc 23550294  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  23550295 tcacaagaggtatc 23550308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 23086829 - 23086931
Alignment:
Q  236 tcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggt 335  Q
    |||| ||||||||||| |||| |||||||  || |||||||||| ||||||  ||||||||||| ||||||||||| ||||||||||||| || ||||||    
T  23086829 tcatgcaaataactcttgataagactccatcattttactctccagctcccatgtcaaactttcatcagccgctcctccccaaacgacttttactagaggt 23086928  T
Q  336 atc 338  Q
    |||    
T  23086929 atc 23086931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 9609504 - 9609617
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  9609504 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 9609603  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  9609604 tcacgagaggtatc 9609617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 16924628 - 16924741
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  16924628 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 16924727  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  16924728 tcacgagaggtatc 16924741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 16981520 - 16981633
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  16981520 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 16981619  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  16981620 tcacgagaggtatc 16981633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 16998368 - 16998481
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  16998368 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 16998467  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  16998468 tcacgagaggtatc 16998481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 17063085 - 17063198
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  17063085 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 17063184  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  17063185 tcacgagaggtatc 17063198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 24709401 - 24709514
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  24709401 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 24709500  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  24709501 tcacgagaggtatc 24709514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 24833648 - 24833535
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||||||| |||| |||| ||||||||||| || ||| | ||||| ||  ||||||||||| | || ||||| |||||| ||||||||||||||||||    
T  24833648 gaaaatgtacgtcatgcaaacaactctggataagaatcctgcatcttgcttcccaactcccacgttaagctttctccagcccctccttcccaaacgactt 24833549  T
Q  325 tcacaagaggtatc 338  Q
    |||||||| |||||    
T  24833548 tcacaagaagtatc 24833535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 27370637 - 27370750
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  27370637 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 27370736  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  27370737 tcacgagaggtatc 27370750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 27217391 - 27217497
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| |||| ||    
T  27217391 tacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgag 27217490  T
Q  332 aggtatc 338  Q
    |||||||    
T  27217491 aggtatc 27217497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 10868218 - 10868331
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||| |     
T  10868218 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgattc 10868317  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  10868318 tcacgagaggtatc 10868331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 24261738 - 24261851
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  | || ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  24261738 gaaaatttacctcaagcgaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 24261837  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  24261838 tcacgagaggtatc 24261851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 41609419 - 41609306
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||||||||  ||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  41609419 gaaaatttacctcaagcaaacaactctggataaaactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 41609320  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  41609319 tcacgagaggtatc 41609306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 22757505 - 22757425
Alignment:
Q  258 gactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||| ||||||||||||| ||||||| |||| |||||||||| |||||| ||||||||||||  |||||||| ||||    
T  22757505 gactccagcatcttactctccagctcccacgtcaagctttcaccagtcgctccatcccaaacgactcgcacaagagatatc 22757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 21326341 - 21326228
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || |||||||||| |||||| ||| ||||||||     
T  21326341 gaaaatttacctcaagcaaacaactctggataagattccagcatcttactctcaagctcccacgttaagctttcaccagtcgctccgtcctaaacgactc 21326242  T
Q  325 tcacaagaggtatc 338  Q
    | ||||| ||||||    
T  21326241 taacaaggggtatc 21326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 23061667 - 23061780
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| || ||||| ||||||||||  | ||||||| | || |||||||||| || ||  ||||||||||||     
T  23061667 gaaaatttacctcaaacaaacaactctggataagattccagcatcttactctgtagctcccacgttaagctttcaccagtcgttctgtcccaaacgactc 23061766  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  23061767 tcacaagaggtatc 23061780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 23265590 - 23265695
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| ||||||||||| |||||| | ||||||||||||| ||||||  |||||||||||||||   ||||  ||||||| || ||||| ||    
T  23265590 tacctcaatcaaacaactctggataagactcccgcatcttactctccagctcccaagtcaaactttcaccagttactccaccccaaacaaccttcactag 23265689  T
Q  332 aggtat 337  Q
    ||||||    
T  23265690 aggtat 23265695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 27385785 - 27385700
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctcc 310  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||    
T  27385785 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcc 27385700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 44379953 - 44379861
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||| |||||||| ||||||||| | | |||| || |||| |||||||||| |||||||  |||||||||| |||| |||||||||    
T  44379953 aactctggataagactccagcatcttactcccaagctcctacgtcaagctttcaccagtcgctcctaaccaaacgactctcacgagaggtatc 44379861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 44386623 - 44386531
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||| |||||||| ||||||||| | | |||| || |||| |||||||||| |||||||  |||||||||| |||| |||||||||    
T  44386623 aactctggataagactccagcatcttactcccaagctcctacgtcaagctttcaccagtcgctcctaaccaaacgactctcacgagaggtatc 44386531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 27366147 - 27366041
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| ||||||||| | |||||||| |||| ||||||  | |||||||| |||| ||||||  ||||||||||| |||||||    
T  27366147 tacctcaaacaaacaactctgggtacgactcccgcatcttactttccagctcccaagttaaactttctccagtcgctccaccccaaacgactctcacaag 27366048  T
Q  332 aggtatc 338  Q
     ||||||    
T  27366047 cggtatc 27366041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 23188392 - 23188489
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| ||||||||||   ||||  ||||||||||| | ||||| ||||||    
T  23188392 caaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagttactccagcccaaacgactctaacaaggggtatc 23188489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 23599655 - 23599752
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| ||||||||||   ||||  ||||||||||| | ||||| ||||||    
T  23599655 caaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagttactccagcccaaacgactctaacaaggggtatc 23599752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 24653720 - 24653789
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||  ||||||| |||||    
T  24653720 tacctcaatcaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaactctcacc 24653789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 302
Target Start/End: Complemental strand, 22325901 - 22325840
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacca 302  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||    
T  22325901 caaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcacca 22325840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 23293333 - 23293402
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    ||||||| ||||| |||| ||||||||||||| | ||||||||||||| ||||||  ||||||| |||||    
T  23293333 tacctcaatcaaacaactttggatacgactcccgcatcttactctccagctcccaagtcaaactctcacc 23293402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 21146090 - 21145993
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||  ||||||||||| | ||||||| || | ||||||| || ||| ||   |||||||||| |||| |||||||||    
T  21146090 caaacaactctggataagactccatcatcttactctcaagctcccacgtctagctttcacgagtcgcccccgtccaaacgactctcacgagaggtatc 21145993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 224 - 338
Target Start/End: Original strand, 21404504 - 21404618
Alignment:
Q  224 tgaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgact 323  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21404504 tgaaaatgtacctctttcaaataactctagatacgactccagcatcttactctccaactcccacgtcaaactttcatcagccgctccttcccaaacgact 21404603  T
Q  324 ttcacaagaggtatc 338  Q
    |||||||||||||||    
T  21404604 ttcacaagaggtatc 21404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 225 - 351
Target Start/End: Complemental strand, 26739422 - 26739296
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| || |||||||| |||||||| ||||||||||||||||||||| | || |||||||||| |||||| |||||||||||||    
T  26739422 gaaaatttacctcatgcaaacaattctggataagactccagcatcttactctccaactcccacgttaagctttcaccagtcgctccgtcccaaacgactt 26739323  T
Q  325 tcacaagaggtatccgctttcccctca 351  Q
    |||||||||||||   |||||||||||    
T  26739322 tcacaagaggtatttcctttcccctca 26739296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 20468811 - 20468698
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||||||||||||  ||| ||||||||| | |||||||| |||||||| |||||||||||| | ||||||||||||| |||||||||||||||||| |    
T  20468811 gaaaatgtacctcatgtaaacaactctggaaaagactccagcatcttactttccaactcccacgttaaactttcaccagtcgctccttcccaaacgacct 20468712  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  20468711 tcacaagaggtatc 20468698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 23470899 - 23471010
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    ||||| |||||| | |||| ||||||||||| || ||||| ||||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||    
T  23470899 aaaatttacctcgtgcaaacaactctggataagattccagcatcttactctccaactcccacgttaagctttcaccagccgctccgtcccaaacgacttt 23470998  T
Q  326 cacaagaggtat 337  Q
    ||||||||||||    
T  23470999 cacaagaggtat 23471010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 21564662 - 21564556
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||| |||| ||||||||||| |||||||| |||||||||||||  |||||  ||||||||||||||||||||||| ||||||||||||| || ||    
T  21564662 tacctcatgcaaacaactctggataagactccagcatcttactctccagttcccatgtcaaactttcaccagccgctcctccccaaacgacttttactag 21564563  T
Q  332 aggtatc 338  Q
    |||||||    
T  21564562 aggtatc 21564556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 21344075 - 21343962
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| |||||||| |||||||||||| | |  |||||||||  |||||| |||||||||||||    
T  21344075 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactttccaactcccacgttaggctttcaccaatcgctccgtcccaaacgactt 21343976  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  21343975 tcacaagaggtatc 21343962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 14887704 - 14887598
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  14887704 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 14887605  T
Q  332 aggtatc 338  Q
    |||||||    
T  14887604 aggtatc 14887598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 22502351 - 22502443
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||||||||||  || |||||||| ||||||||||||||    
T  22502351 aactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagccgctccacccaaaacgactctcacaagaggtatc 22502443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 24736307 - 24736215
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||| ||| ||||||||||||||    
T  24736307 aactctggatacgactcctgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacaactctcacaagaggtatc 24736215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 24737481 - 24737389
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||| ||| ||||||||||||||    
T  24737481 aactctggatacgactcctgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacaactctcacaagaggtatc 24737389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 24750250 - 24750158
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||| ||| ||||||||||||||    
T  24750250 aactctggatacgactcctgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacaactctcacaagaggtatc 24750158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 37546196 - 37546105
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||||||||    
T  37546196 aactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtat 37546105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 20341937 - 20342043
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | |||||||||||||  |||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  20341937 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagttcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 20342036  T
Q  332 aggtatc 338  Q
    |||||||    
T  20342037 aggtatc 20342043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 21662749 - 21662643
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| ||||||||||| |||||||  ||||||||||||||||||||| ||||||| |||||||   ||||| ||||||| |||||||| ||    
T  21662749 tacctcaatcaaacaactctggataagactccaacatcttactctccaactcccacgtcaaactctcaccagtttctcctccccaaacaactttcactag 21662650  T
Q  332 aggtatc 338  Q
    || ||||    
T  21662649 agatatc 21662643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 23080799 - 23080693
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  ||||||||||||||| |||||| |||||||||||| ||| |||    
T  23080799 tacctcaaacaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccatcccaaacgactctcagaag 23080700  T
Q  332 aggtatc 338  Q
    |||||||    
T  23080699 aggtatc 23080693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 16356171 - 16356284
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  16356171 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 16356270  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  16356271 tcacgagaggtatc 16356284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 22134337 - 22134450
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  22134337 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 22134436  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  22134437 tcacgagaggtatc 22134450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 22333604 - 22333491
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  22333604 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 22333505  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  22333504 tcacgagaggtatc 22333491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 27518076 - 27518189
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  27518076 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 27518175  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  27518176 tcacgagaggtatc 27518189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 34566163 - 34566276
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  34566163 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 34566262  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  34566263 tcacgagaggtatc 34566276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 40708449 - 40708562
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  40708449 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 40708548  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  40708549 tcacgagaggtatc 40708562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 20573190 - 20573302
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||| ||||||| | ||||||  | || |||||||||| |||||| ||||| |||||||    
T  20573190 gaaaatttacctcaagcaaacaactctggataagactccagcatcgtactctctagctcccatgttaagctttcaccagtcgctccgtcccagacgactt 20573289  T
Q  325 tcacaagaggtat 337  Q
    |||||||||||||    
T  20573290 tcacaagaggtat 20573302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 334
Target Start/End: Complemental strand, 24799110 - 24799008
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| | |||||    
T  24799110 tacctcaaacaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctaacaag 24799011  T
Q  332 agg 334  Q
    |||    
T  24799010 agg 24799008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 25847750 - 25847836
Alignment:
Q  252 ggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||| | ||||||||||||||    
T  25847750 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgaatctcacaagaggtatc 25847836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 27686110 - 27686004
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| |||| ||    
T  27686110 tacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgag 27686011  T
Q  332 aggtatc 338  Q
    |||||||    
T  27686010 aggtatc 27686004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 15000456 - 15000343
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| || |||   ||||||||||     
T  15000456 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgttcccgtccaaacgactc 15000357  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  15000356 tcacgagaggtatc 15000343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 21625194 - 21625299
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||| | ||||||||||||| ||||||| |||||||||||||||   ||||| ||||||| || ||||| ||    
T  21625194 tacctcaagcaaacaactctggataagactcccgcatcttactctccagctcccacgtcaaactttcaccagttactcctccccaaacaaccttcactag 21625293  T
Q  332 aggtat 337  Q
    ||||||    
T  21625294 aggtat 21625299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 21985022 - 21984909
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||| |||| || ||||| ||||||||||| | ||||||| | || |||||||||| |||||| ||||||||||||     
T  21985022 gaaaatttacctcaagcaaacaactctagataagattccagcatcttactctctagctcccacgttaagctttcaccagtcgctccgtcccaaacgactc 21984923  T
Q  325 tcacaagaggtatc 338  Q
    |||||||| |||||    
T  21984922 tcacaagaagtatc 21984909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 22344775 - 22344888
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| || |||||||| | ||||||| |||| |||||||||||||||||   ||||||||||     
T  22344775 gaaaatttacctcaagcaaacaactctggataagactccagcattttactctcaagctcccacgtcaagctttcaccagccgctcccgtccaaacgactc 22344874  T
Q  325 tcacaagaggtatc 338  Q
    |||  |||||||||    
T  22344875 tcatgagaggtatc 22344888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 27669207 - 27669094
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||   ||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  27669207 gaaaatttacctcaagtaaaaaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 27669108  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  27669107 tcacgagaggtatc 27669094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 29476790 - 29476677
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  29476790 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 29476691  T
Q  325 tcacaagaggtatc 338  Q
    |||| | |||||||    
T  29476690 tcacgataggtatc 29476677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 37292213 - 37292100
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||  |||||||| |||||||| || | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  37292213 gaaaatttacctcaagcaaacaactctggatgagactccagcatcttactttcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 37292114  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  37292113 tcacaagaggtatc 37292100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 41770511 - 41770624
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||   ||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  41770511 gaaaatttacctcaagtaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 41770610  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  41770611 tcacgagaggtatc 41770624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 27610044 - 27610136
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| |||| |||||||||    
T  27610044 aactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatc 27610136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 22380857 - 22380963
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | |||||||| |||| ||||||  |||||||||||| || ||||||  ||||||||||| |||||||    
T  22380857 tacctcaaacaaacaactccgggtacgactcccgcatcttactttccagctcccaagtcaaactttcactagtcgctccaccccaaacgactctcacaag 22380956  T
Q  332 aggtatc 338  Q
    |||||||    
T  22380957 aggtatc 22380963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 18775446 - 18775542
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacga 321  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||| ||| ||||||  |||||||||    
T  18775446 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcatcagtcgctccagcccaaacga 18775542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 26681925 - 26682021
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||   ||||||||||| | ||||| |||||    
T  26681925 caaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctctagcccaaacgactctaacaaggggtat 26682021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 26953532 - 26953628
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||   ||||||||||| | ||||| |||||    
T  26953532 caaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctctagcccaaacgactctaacaaggggtat 26953628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 19769629 - 19769742
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||   ||| ||||||||||| |||||||  ||||||||||  | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  19769629 gaaaatttacctcaagtaaacaactctggataagactccatcatcttactcttaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 19769728  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  19769729 tcacgagaggtatc 19769742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 17270008 - 17269947
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcac 328  Q
    ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| ||||    
T  17270008 atcttactctccagctcccaagtcaaactttcaccagtcgctccgccccaaacgactctcac 17269947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 21496291 - 21496396
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| |||||| | ||||||||||||| ||||||  |||||||||||||||   ||||| ||||||| || || || ||    
T  21496291 tacctcaagcaaacaactccggataagactcccgcatcttactctccagctcccaagtcaaactttcaccagttactcctccccaaacaaccttaactag 21496390  T
Q  332 aggtat 337  Q
    ||||||    
T  21496391 aggtat 21496396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 23442994 - 23442934
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||||||||||| |||||| | ||||||||||||| |||| |  |||||||||||||    
T  23442994 caaataactctggataagactcccgcatcttactctccagctcctaagtcaaactttcacc 23442934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 6403258 - 6403189
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||| |||||    
T  6403258 tacctcaaacaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactctcacc 6403189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 356
Target Start/End: Complemental strand, 977 - 846
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  977 gaaaatgtacctcattcaaataactctggatacaactccagcatctttctctccaactcctacgtcaaactttcaccagccgctcctccccaaacgactt 878  T
Q  325 tcacaagaggtatccgctttcccctcagcttc 356  Q
    ||||||||||||||  ||| || |||||||||    
T  877 tcacaagaggtatctccttgcctctcagcttc 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 226 - 338
Target Start/End: Original strand, 111790 - 111902
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    |||||||||||||| |||| ||||||||||| |||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  111790 aaaatgtacctcatgcaaacaactctggataagactccagcatcttactttccaactcccacgttaaactttcaccagccgctccttcccaaacgacttt 111889  T
Q  326 cacaagaggtatc 338  Q
    |||||||||||||    
T  111890 cacaagaggtatc 111902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 203999 - 203893
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||| |||||||  |||||| ||||||| |||||||| ||    
T  203999 tacctcaatcaaacaactctggataagactccagcatcttactctccaactcccacgtcaaactctcaccagttgctcctccccaaacaactttcactag 203900  T
Q  332 aggtatc 338  Q
    |||||||    
T  203899 aggtatc 203893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 385603 - 385662
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcac 300  Q
    |||| ||||||||||| |||||||| ||||||||||||| ||||||  ||||||||||||    
T  385603 caaacaactctggataagactccagcatcttactctccagctcccatgtcaaactttcac 385662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 117345 - 117415
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacca 302  Q
    ||||||| ||||| ||||||||||| |||||| | ||||||||||||| ||||||  ||||||| ||||||    
T  117345 tacctcaatcaaacaactctggataagactcccgcatcttactctccagctcccaagtcaaactctcacca 117415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 38735 - 38622
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||  ||||||||||||||||||||||||||||||| ||||    
T  38735 gaaaatgtacctcattcaaacaactctggatacgattccagcatcttactttccaattcccatgtcaaactttcaccagccgctccttcccaaacaactt 38636  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  38635 tcacaagaggtatc 38622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 229 - 356
Target Start/End: Complemental strand, 43410 - 43283
Alignment:
Q  229 atgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcac 328  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||| |||||||||||||| ||||| ||||| |||||||||||||    
T  43410 atgtacctcattcaaacaactctggatacgattccagcatcttactttccaattcccacgtcaaactttcaccaaccgcttcttccaaaacgactttcac 43311  T
Q  329 aagaggtatccgctttcccctcagcttc 356  Q
    ||||||||||  ||| ||||||| ||||    
T  43310 aagaggtatctccttgcccctcaacttc 43283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 356
Target Start/End: Complemental strand, 17729 - 17597
Alignment:
Q  224 tgaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgact 323  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||| ||||||||||||||||  ||||| ||||||||| |    
T  17729 tgaaaatgtacctcattcaaataactctgaatacgactccagcatcttgctcttcaactcccacgtcaaactttcaccagcaactcctccccaaacgatt 17630  T
Q  324 ttcacaagaggtatccgctttcccctcagcttc 356  Q
    |||||||||||||||  ||| || |||||||||    
T  17629 ttcacaagaggtatctccttgcctctcagcttc 17597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 356
Target Start/End: Original strand, 21661690 - 21661821
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| || || ||||||| ||||    
T  21661690 gaaaatgtacctcattcaaataactttggatacgactccagcatcttgctctccaactcccacgtcaaactttcaccagccacttctccccaaacaactt 21661789  T
Q  325 tcacaagaggtatccgctttcccctcagcttc 356  Q
    |||||||||| |||  ||| || |||||||||    
T  21661790 tcacaagaggcatctccttgcctctcagcttc 21661821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 15203605 - 15203718
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| ||||| |||||||| || |||||||||||| | || |||||||||||||||||||||||||||| ||    
T  15203605 gaaaatgtacctcatgcaaacaactctggataagactctagtatcttgctttccaactcccacgttaagctttcaccagccgctccttcccaaacgaatt 15203704  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  15203705 tcacaagaggtatc 15203718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 12254582 - 12254469
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || |||||||||| ||||||||||||||||||||    
T  12254582 gaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagctcccacgttaagctttcaccagtcgctccttcccaaacgactt 12254483  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  12254482 tcacaagaggtatc 12254469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 14347563 - 14347676
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||||||||||||  | || |||||| ||| |||||| ||||||| |||||    
T  14347563 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctccaactcccatgttaagctttcatcagtcgctccatcccaaatgactt 14347662  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  14347663 tcacaagaggtatc 14347676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 15163965 - 15163852
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||| ||||| || ||||| ||||||||||| | ||||||| | || |||||||||| |||||||||||||||||||     
T  15163965 gaaaatttacctcatgcaaacaactccggataagattccagcatcttactctctagctcccacgttaagctttcaccagtcgctccttcccaaacgactc 15163866  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  15163865 tcacaagaggtatc 15163852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 8212646 - 8212540
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  8212646 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 8212547  T
Q  332 aggtatc 338  Q
    |||||||    
T  8212546 aggtatc 8212540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 11306781 - 11306675
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  11306781 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 11306682  T
Q  332 aggtatc 338  Q
    |||||||    
T  11306681 aggtatc 11306675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 11388928 - 11388836
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||| |||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| ||||||||||||||    
T  11388928 aactctggataagactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatc 11388836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 26119099 - 26118993
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||| ||| ||||||  ||||||||||| |||||||    
T  26119099 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcatcagtcgctccaccccaaacgactctcacaag 26119000  T
Q  332 aggtatc 338  Q
    |||||||    
T  26118999 aggtatc 26118993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 49152032 - 49152138
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | || |||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  49152032 tacctcaagcaaacaactccggatacgactcccgcattttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 49152131  T
Q  332 aggtatc 338  Q
    |||||||    
T  49152132 aggtatc 49152138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 17860 - 17747
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||  |||||||||||     
T  17860 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccagcccaaacgactc 17761  T
Q  325 tcacaagaggtatc 338  Q
    | ||||| ||||||    
T  17760 taacaaggggtatc 17747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 6413245 - 6413350
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| || ||| | ||||||||||||| ||||||  ||||||||||||||| |||||| |||||||||||| |||||||    
T  6413245 tacctcaaacaaacaactctggataagaatcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacaag 6413344  T
Q  332 aggtat 337  Q
     |||||    
T  6413345 gggtat 6413350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 8707331 - 8707444
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  8707331 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 8707430  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  8707431 tcacgagaggtatc 8707444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 11237757 - 11237644
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  11237757 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 11237658  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  11237657 tcacgagaggtatc 11237644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 11553646 - 11553533
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  11553646 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 11553547  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  11553546 tcacgagaggtatc 11553533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 14037533 - 14037646
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| |||||||| |||||||||||  | |  |||||| ||  |||||||||||||| |||||    
T  14037533 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactttccaactcccatgttatgctttcatcattcgctccttcccaaatgactt 14037632  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  14037633 tcacaagaggtatc 14037646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 14332123 - 14332236
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  14332123 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 14332222  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  14332223 tcacgagaggtatc 14332236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 15161601 - 15161488
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  15161601 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 15161502  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  15161501 tcacgagaggtatc 15161488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 18552302 - 18552189
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  18552302 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 18552203  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  18552202 tcacgagaggtatc 18552189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 23517313 - 23517200
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  23517313 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 23517214  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  23517213 tcacgagaggtatc 23517200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 338
Target Start/End: Complemental strand, 13634264 - 13634152
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    ||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||  ||||||||||| |    
T  13634264 aaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccagcccaaacgactct 13634165  T
Q  326 cacaagaggtatc 338  Q
     ||||| ||||||    
T  13634164 aacaaggggtatc 13634152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 12455437 - 12455543
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | |||||| |||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  12455437 tacctcaagcaaacaactccgggtacgactcccgcatcttattctccatctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 12455536  T
Q  332 aggtatc 338  Q
    |||||||    
T  12455537 aggtatc 12455543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 13685789 - 13685902
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| ||||  ||||||||| ||||||   ||||||||||     
T  13685789 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagttttcaccagtcgctcccgtccaaacgactc 13685888  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  13685889 tcacgagaggtatc 13685902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 44791895 - 44791782
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  44791895 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 44791796  T
Q  325 tcacaagaggtatc 338  Q
    | || |||||||||    
T  44791795 tgacgagaggtatc 44791782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 10870742 - 10870834
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||| ||||||||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| |||| |||||||||    
T  10870742 aactcttgatacgactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatc 10870834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 12207315 - 12207209
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||||  |||||||||| || ||||||  |||||||||||||||  |||||| ||||||| ||||| || ||    
T  12207315 tacctcaagcaaacaactctggataagactccaacatcttactctgcagctcccatgtcaaactttcaccagatgctcctccccaaacaacttttactag 12207216  T
Q  332 aggtatc 338  Q
    |||||||    
T  12207215 aggtatc 12207209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 8198354 - 8198467
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  | || ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  8198354 gaaaatttacctcaagcgaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 8198453  T
Q  325 tcacaagaggtatc 338  Q
    | || |||||||||    
T  8198454 ttacgagaggtatc 8198467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 15340230 - 15340335
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| || ||| | |||||||| |||| ||||||  |||| |||||||||| ||||||||||||||||||| |||||||    
T  15340230 tacctcaaacaaacaactcaggatatgaatcccgcatcttactttccagctcccaagtcaagctttcaccagtcgctccttcccaaacgactctcacaag 15340329  T
Q  332 aggtat 337  Q
     |||||    
T  15340330 gggtat 15340335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 16950986 - 16950881
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| ||||||||| ||||||||||||||| ||||||  | |||||||||||||   ||||  ||||||| |||||||| ||    
T  16950986 tacctcaaacaaacaactctgggtacgactcccgtatcttactctccagctcccaagtgaaactttcaccagttactccaccccaaacaactttcactag 16950887  T
Q  332 aggtat 337  Q
    ||||||    
T  16950886 aggtat 16950881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 328
Target Start/End: Original strand, 13021090 - 13021186
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcac 328  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  |||||||||||| || |||||| |||||||||||| ||||    
T  13021090 tacctcaagcaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaactttcactagtcgctccatcccaaacgactctcac 13021186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 13665301 - 13665370
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||  ||||||| |||||    
T  13665301 tacctcaatcaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaactctcacc 13665370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 337
Target Start/End: Complemental strand, 14286856 - 14286786
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||||||| |||| ||||||  |||| |||||||||| |||||| |||||||||||| ||||||| |||||    
T  14286856 atcttactttccagctcccaagtcaagctttcaccagtcgctccgtcccaaacgactctcacaaggggtat 14286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 14129607 - 14129712
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| || ||| | |||||||| |||| ||||||  ||||||||||||||| ||||||  |||||| |||| |||||||    
T  14129607 tacctcaaacaaacaactcaggatatgaatcccgcatcttactttccagctcccaagtcaaactttcaccagtcgctccaccccaaatgactctcacaag 14129706  T
Q  332 aggtat 337  Q
     |||||    
T  14129707 gggtat 14129712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 14433425 - 14433530
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| || ||| | |||||||| |||| ||||||  ||||||||||||||| ||||||  |||||| |||| |||||||    
T  14433425 tacctcaaacaaacaactcaggatatgaatcccgcatcttactttccagctcccaagtcaaactttcaccagtcgctccaccccaaatgactctcacaag 14433524  T
Q  332 aggtat 337  Q
     |||||    
T  14433525 gggtat 14433530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 16072813 - 16072708
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| || ||| | ||||||||||||| ||||||  |||||||||||||||   ||||  ||||||| || ||||| ||    
T  16072813 tacctcaagcaaacaactctggataagattcccgcatcttactctccagctcccaagtcaaactttcaccagttactccaccccaaacaaccttcactag 16072714  T
Q  332 aggtat 337  Q
    ||||||    
T  16072713 aggtat 16072708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 26288551 - 26288446
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| |||||||||   ||||||||||||| ||||||  ||||||| |||||||   ||||  ||||||| |||||||| ||    
T  26288551 tacctcaaacaaacaactctgggtacgactcccacatcttactctccagctcccaagtcaaactctcaccagttactccaccccaaacaactttcactag 26288452  T
Q  332 aggtat 337  Q
    ||||||    
T  26288451 aggtat 26288446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 1908 - 1817
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||||| | ||||||||| | ||||||||||||| ||||||  ||||||| |||||||   ||||  ||||||| |||||||| ||||||||    
T  1908 aactcttggtacgactcccgcatcttactctccagctcccaagtcaaactctcaccagttactccaccccaaacaactttcactagaggtat 1817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 15624492 - 15624540
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttac 273  Q
    ||||||||||||||| |||| ||||||||||| ||||| || |||||||    
T  15624492 gaaaatgtacctcatgcaaacaactctggataagactctagcatcttac 15624540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 59300 - 59198
Alignment:
Q  235 ctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagagg 334  Q
    |||||||||||||||  |||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  59300 ctcattcaaataactacggatacgactccagcatcttactctccaattcccacttcaaactttcaccagccgctccttcccaaacgattttcacaagagg 59201  T
Q  335 tat 337  Q
    |||    
T  59200 tat 59198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 18895 - 19000
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| || ||| | |||||||| |||| ||||||  | ||||||||||||| |||||| |||||||||||| |||||||    
T  18895 tacctcaaacaaacaactctggataagaatcccgcatcttactatccatctcccaagttaaactttcaccagtcgctccgtcccaaacgactctcacaag 18994  T
Q  332 aggtat 337  Q
     |||||    
T  18995 gggtat 19000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 798 - 685
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||| | |||| ||||||||||| |||||||| |||||||||||||||| |||| | || |||||||||||||||||||||||||||||||    
T  798 gaaaatgtacctcgtgcaaacaactctggataagactccagcatcttactctccaacttccacgttaagctttcaccagccgctccttcccaaacgactt 699  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  698 tcacaagaggtatc 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 78; Significance: 3e-36; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 165247 - 165134
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||||| || |||||||||||||||||||||||||||||||    
T  165247 gaaaatgtacctcatgcaaacaactctggataagactccagcatcttactctctagctcccacattaagctttcaccagccgctccttcccaaacgactt 165148  T
Q  325 tcacaagaggtatc 338  Q
    |||||||| |||||    
T  165147 tcacaagacgtatc 165134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 308427 - 308540
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  308427 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 308526  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  308527 tcacgagaggtatc 308540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 260083 - 260188
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| || ||| | |||||||| |||| ||||||  |||| |||||||||| |||||| |||||||||||| |||||||    
T  260083 tacctcaaacaaacaactcaggatatgaatcccgcatcttactttccagctcccaagtcaagctttcaccagtcgctccgtcccaaacgactctcacaag 260182  T
Q  332 aggtat 337  Q
     |||||    
T  260183 gggtat 260188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 337
Target Start/End: Complemental strand, 279326 - 279256
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    ||||||||||| | ||||||| |||| |||||||||| ||||   |||||||||||||||||||| |||||    
T  279326 atcttactctcaagctcccacgtcaagctttcaccagtcgctttgtcccaaacgactttcacaaggggtat 279256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 14652045 - 14652158
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||||| || |||||||||||||||||||||||||||||||    
T  14652045 gaaaatgtacctcatgcaaacaactctggataagactccagcatcttactctctagctcccacattaagctttcaccagccgctccttcccaaacgactt 14652144  T
Q  325 tcacaagaggtatc 338  Q
    |||||||| |||||    
T  14652145 tcacaagacgtatc 14652158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 14851641 - 14851528
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| |||||||| ||||||||||| || |||||| | |  ||||||||||||||||| |||||||||||||    
T  14851641 gaaaatttacctcatgcaaacaactctggataagactccagcatcttactctctaattcccacgttaggctttcaccagccgctccgtcccaaacgactt 14851542  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  14851541 tcacaagaggtatc 14851528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 20890727 - 20890833
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  20890727 tacctcaatcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 20890826  T
Q  332 aggtatc 338  Q
    |||||||    
T  20890827 aggtatc 20890833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 14927532 - 14927421
Alignment:
Q  227 aaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttc 326  Q
    |||| |||||||| |||| ||||||||||| || || || ||||||||||| | ||||||| | || |||||||||| ||||||||||||||||||| ||    
T  14927532 aaatttacctcatgcaaacaactctggataagattctagcatcttactctctagctcccacgttaagctttcaccagtcgctccttcccaaacgactctc 14927433  T
Q  327 acaagaggtatc 338  Q
    ||||||||||||    
T  14927432 acaagaggtatc 14927421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 3265325 - 3265219
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  3265325 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 3265226  T
Q  332 aggtatc 338  Q
    |||||||    
T  3265225 aggtatc 3265219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 29454068 - 29453962
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||| ||||||||| ||||||  ||||||||||||||||||||||  ||||||||||| |||||||    
T  29454068 tacctcaagcaaacaactccggatacgactcctgcatcctactctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaag 29453969  T
Q  332 aggtatc 338  Q
    |||||||    
T  29453968 aggtatc 29453962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 11207762 - 11207656
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  11207762 tacctcaagcaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 11207663  T
Q  332 aggtatc 338  Q
    |||||||    
T  11207662 aggtatc 11207656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 15415507 - 15415401
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||| |||||| |||||||| ||||||||||||| ||||||  |||||||||||||||  |||||| ||||||| |||||||| ||    
T  15415507 tacctcaagcaaacaactttggataagactccagcatcttactctccagctcccatgtcaaactttcaccagatgctcctccccaaacaactttcactag 15415408  T
Q  332 aggtatc 338  Q
    |||||||    
T  15415407 aggtatc 15415401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 8386149 - 8386262
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  8386149 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 8386248  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  8386249 tcacgagaggtatc 8386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 14304252 - 14304139
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  14304252 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 14304153  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  14304152 tcacgagaggtatc 14304139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 14680304 - 14680417
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| || |||||||| |||||||| ||||||||||| | |||||||||||| |||||||||| ||||||   ||||||||||     
T  14680304 gaaaatttacctcaagcaaacaattctggataagactccagcatcttactctcaagctcccacatcaagctttcaccagtcgctcccgaccaaacgactc 14680403  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  14680404 tcacgagaggtatc 14680417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 18296942 - 18297055
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  18296942 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 18297041  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  18297042 tcacgagaggtatc 18297055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 23955484 - 23955597
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  23955484 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 23955583  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  23955584 tcacgagaggtatc 23955597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 29039679 - 29039566
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  29039679 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 29039580  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  29039579 tcacgagaggtatc 29039566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 338
Target Start/End: Original strand, 12476338 - 12476450
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    ||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| |    
T  12476338 aaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactct 12476437  T
Q  326 cacaagaggtatc 338  Q
    ||| |||||||||    
T  12476438 cacgagaggtatc 12476450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 33222662 - 33222768
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| | |||||    
T  33222662 tacctcaaacaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactcttacaag 33222761  T
Q  332 aggtatc 338  Q
    |||||||    
T  33222762 aggtatc 33222768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 44662394 - 44662288
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||| ||||||||| || |||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  44662394 tacctcaagcaaacaactccggatacgactcccgcatcctactctccagcttccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 44662295  T
Q  332 aggtatc 338  Q
    |||||||    
T  44662294 aggtatc 44662288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 8053898 - 8053785
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| |  |||||| |||| |||||||||| ||||||   ||||||||||     
T  8053898 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagttcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 8053799  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  8053798 tcacgagaggtatc 8053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 12523413 - 12523526
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||| |||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  12523413 gaaaatttacctcaagcaaacaactctagataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 12523512  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  12523513 tcacgagaggtatc 12523526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 14267174 - 14267061
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  14267174 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 14267075  T
Q  325 tcacaagaggtatc 338  Q
    |||| || ||||||    
T  14267074 tcacgaggggtatc 14267061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 15364123 - 15364236
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  15364123 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 15364222  T
Q  325 tcacaagaggtatc 338  Q
    ||||  ||||||||    
T  15364223 tcacgtgaggtatc 15364236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 19779068 - 19778955
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||   ||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  19779068 gaaaatttacctcaagtaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 19778969  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  19778968 tcacgagaggtatc 19778955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 27711073 - 27711186
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||   ||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  27711073 gaaaatttacctcaagtaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 27711172  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  27711173 tcacgagaggtatc 27711186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 40472777 - 40472890
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| || |||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  40472777 gaaaatttacctcaagcaaacaactctggataagactccagcattttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 40472876  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  40472877 tcacgagaggtatc 40472890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 337
Target Start/End: Complemental strand, 15352145 - 15352049
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||| ||||||||||| |||||||  ||||||||||| | ||||||| |||| |||||||||| |||||| |||||||||||| | ||||| |||||    
T  15352145 caaacaactctggataagactccaacatcttactctcaagctcccacgtcaagctttcaccagtcgctccatcccaaacgactctaacaaggggtat 15352049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 16355720 - 16355608
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||||| || | |||| | ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  16355720 gaaaatttacctcaagcaaacaactctgggtaagcctcccgcatcttactctctagctcccacgtcaagctttcaccagtcgctccatcccaaacgactc 16355621  T
Q  325 tcacaagaggtat 337  Q
    ||||||| |||||    
T  16355620 tcacaaggggtat 16355608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 1649770 - 1649699
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| ||||||| ||||||    
T  1649770 atcttactctccagctcccaagtcaaactttcaccagacgctccaccccaaacgactctcacaaggggtatc 1649699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 14159271 - 14159342
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||| | ||||||| |||| |||||||| | |||||| ||||||||||||||||| || ||||||    
T  14159271 atcttactctctagctcccacgtcaagctttcacccgtcgctccgtcccaaacgactttcacgaggggtatc 14159342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 18608105 - 18608007
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgact 323  Q
    |||||| |||||||  |||||||||||||||| || ||||  ||||||||||| | ||||||| | || ||||||||||  |||||  |||||||||||    
T  18608105 gaaaatttacctcaagcaaataactctggataagagtccaacatcttactctcaagctcccacgttaagctttcaccagttgctccagcccaaacgact 18608007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 7090216 - 7090313
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| |||| |||||| || ||||| |||||||| || | || |||| | || |||||||||| |||||| |||||||||||| | ||||||||||||    
T  7090216 caaacaactttggataagattccagcatcttactttctagcttccacgttaagctttcaccagtcgctccgtcccaaacgactcttacaagaggtatc 7090313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 15003892 - 15003823
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||||||||| |||||| | ||||||||||||| ||||||  |||||||||||||    
T  15003892 tacctcaagcaaacaactctggataagactcccgcatcttactctccagctcccaagtcaaactttcacc 15003823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 18227721 - 18227636
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctcc 310  Q
    |||||| |||||||  |||| ||||||||||| |||||||| |||||||| |  | ||||||| |||| |||||||||| ||||||    
T  18227721 gaaaatttacctcaagcaaacaactctggataagactccagcatcttacttttaagctcccacgtcaagctttcaccagtcgctcc 18227636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 15319337 - 15319432
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||| ||||||||||| ||||| || ||||||||||||| |||| |  |||||||||||||||   ||||| ||||||| || ||||| ||||||||    
T  15319337 caaacaactctggataagactc-agcatcttactctccagctcctatgtcaaactttcaccagttactcctccccaaacaaccttcactagaggtat 15319432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 18164649 - 18164594
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||| ||||||||||||| | ||||||||||||| ||||||  |||||||||||||    
T  18164649 aactttggatacgactcccgcatcttactctccagctcccaagtcaaactttcacc 18164594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 15359585 - 15359480
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||||| ||||||| |  |||||||||||| ||||||  ||||| |||||||||   ||||  ||||||| || ||||| ||    
T  15359585 tacctcaaacaaacaactctggattcgactcccgcttcttactctccagctcccaagtcaaaatttcaccagttactccaccccaaacaaccttcactag 15359486  T
Q  332 aggtat 337  Q
    ||||||    
T  15359485 aggtat 15359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 15070166 - 15070262
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    ||||||||||| |||| |||||||  |||||||||||||  |||||  | | |||||||||||   ||||| ||||||| || ||||| ||||||||    
T  15070166 caaataactctagataagactccaacatcttactctccagttcccatgttagactttcaccagttactcctccccaaacaaccttcactagaggtat 15070262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 15245668 - 15245736
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcac 300  Q
    |||||||  |||| ||||| ||||| |||||| | ||||||||||||| ||||||  ||||||||||||    
T  15245668 tacctcaagcaaacaactccggataagactcccgcatcttactctccagctcccaagtcaaactttcac 15245736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 6128 - 6015
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||| ||||| |||| ||| |||||||| ||||||| ||||    
T  6128 gaaaatgtacctcatgcaaacaactctggatatgactccagcatcttactctccaactcccacgtcaaattttcgccaaccgctcctccccaaactactt 6029  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  6028 tcacaagaggtatc 6015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 15617 - 15504
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| |||||||| |||||||| |||||||||||| | |||||||||||||  |||||||||||||||||||    
T  15617 gaaaatgtacctcatgcaaacaactctggataagactccagcatcttactttccaactcccacgttaaactttcaccagttgctccttcccaaacgactt 15518  T
Q  325 tcacaagaggtatc 338  Q
    | ||||||||||||    
T  15517 ttacaagaggtatc 15504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 87014 - 86929
Alignment:
Q  253 gatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  87014 gatacgactccagcatcttactttccaactcccacgtcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 86929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 15247203 - 15247316
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||| | |||| ||||||||||| |||||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  15247203 gaaaatttacctcgtgcaaacaactctggataagactccagcatcttactctccaactcccacattaagctttcaccagccactccttcccaaacgactt 15247302  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||| ||||    
T  15247303 tcacaagagatatc 15247316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 356
Target Start/End: Complemental strand, 15016326 - 15016195
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| |||| |||||| |||||||  | |||||||||||| | |||| |||||||||||||||| |||||| ||||||||||||    
T  15016326 gaaaatgtacctcatgcaaacaactttggatatgactccaacaacttactctccaatttccacgtcaaactttcaccagctgctcctccccaaacgactt 15016227  T
Q  325 tcacaagaggtatccgctttcccctcagcttc 356  Q
    ||||||||||||||  ||| || |||||||||    
T  15016226 tcacaagaggtatctccttgcctctcagcttc 15016195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 336
Target Start/End: Original strand, 15208247 - 15208358
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||| | |||| ||||| ||||| |||||||| ||||||||||||||||||||| | || |||||||||||| ||||||||||||||||||    
T  15208247 gaaaatttacctcttgcaaacaactccggataagactccagcatcttactctccaactcccacgttaagctttcaccagccactccttcccaaacgactt 15208346  T
Q  325 tcacaagaggta 336  Q
    ||||||||||||    
T  15208347 tcacaagaggta 15208358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 320589 - 320702
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||||| || |||||||||| |||||| |||||||||||||    
T  320589 gaaaatttacctcatgcaaacaactctggataagactccagcatcttactctctatctcccacattaagctttcaccagtcgctccgtcccaaacgactt 320688  T
Q  325 tcacaagaggtatc 338  Q
    ||| ||||||||||    
T  320689 tcataagaggtatc 320702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 12497604 - 12497716
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  12497604 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactc 12497703  T
Q  325 tcacaagaggtat 337  Q
    ||||||| |||||    
T  12497704 tcacaaggggtat 12497716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 31944845 - 31944951
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||||||||||||| | ||| ||||||||| ||||||  ||||||||||||||| |||||| |||||||||||| |||||||    
T  31944845 tacctcaaacaaacaactctggatacgactcccgcatcctactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacaag 31944944  T
Q  332 aggtatc 338  Q
     ||||||    
T  31944945 gggtatc 31944951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 16370770 - 16370881
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| ||||| || ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  16370770 gaaaatttacctcatgcaaacaactctggataagactctagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcc-tcccaaacgactc 16370868  T
Q  325 tcacaagaggtat 337  Q
    ||||||| |||||    
T  16370869 tcacaaggggtat 16370881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 14877272 - 14877161
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    ||||| |||||||  |||| |||||| |||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| | |||||||||| |    
T  14877272 aaaatttacctcaagcaaacaactctagataagactccagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgttccaaacgactct 14877173  T
Q  326 cacaagaggtat 337  Q
    ||||||||||||    
T  14877172 cacaagaggtat 14877161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 31689379 - 31689273
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||||||||||||| | ||| ||||||||| ||||||  ||||||||||||||| |||||| |||||||||||| ||||| |    
T  31689379 tacctcaaacaaacaactctggatacgactcccgcatcctactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacagg 31689280  T
Q  332 aggtatc 338  Q
     ||||||    
T  31689279 gggtatc 31689273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 16635129 - 16635242
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  16635129 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 16635228  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  16635229 tcacgagaggtatc 16635242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 43162453 - 43162566
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  43162453 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 43162552  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  43162553 tcacgagaggtatc 43162566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 48424803 - 48424916
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  48424803 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 48424902  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  48424903 tcacgagaggtatc 48424916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 6600124 - 6600216
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||||| ||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||||||| |||||||||    
T  6600124 aactctggatacgattccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactttcacgagaggtatc 6600216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 9514100 - 9514212
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| || ||||  ||||||||||| | ||||||| | || |||||||||| |||||| ||||||||||||     
T  9514100 gaaaatttacctcaagcaaacaactctggataagattccaacatcttactctctagctcccacgttaagctttcaccagtcgctccgtcccaaacgactc 9514199  T
Q  325 tcacaagaggtat 337  Q
    |||||||||||||    
T  9514200 tcacaagaggtat 9514212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 9522075 - 9522187
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| || ||||  ||||||||||| | ||||||| | || |||||||||| |||||| ||||||||||||     
T  9522075 gaaaatttacctcaagcaaacaactctggataagattccaacatcttactctctagctcccacgttaagctttcaccagtcgctccgtcccaaacgactc 9522174  T
Q  325 tcacaagaggtat 337  Q
    |||||||||||||    
T  9522175 tcacaagaggtat 9522187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 15227022 - 15227128
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||||| ||||||||||||| ||||||  |||||||||||||||  |||||| |||| || ||||| || ||    
T  15227022 tacctcaagcaaacaactctggataagactccagaatcttactctccagctcccatgtcaaactttcaccagatgctcctccccacacaacttttactag 15227121  T
Q  332 aggtatc 338  Q
    |||||||    
T  15227122 aggtatc 15227128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 16330415 - 16330309
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  |||||| |||||||| ||||||  ||||||||||| |||||||    
T  16330415 tacctcaaacaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaaccttcaccagtcgctccaccccaaacgactctcacaag 16330316  T
Q  332 aggtatc 338  Q
    |||||||    
T  16330315 aggtatc 16330309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 10004956 - 10005069
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| |  |||||| |||| |||||||||| ||||||   ||||||||||     
T  10004956 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagttcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 10005055  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  10005056 tcacgagaggtatc 10005069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 10905566 - 10905679
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| |  |||||| |||| |||||||||| ||||||   ||||||||||     
T  10905566 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagttcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 10905665  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  10905666 tcacgagaggtatc 10905679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 13252046 - 13252159
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||||| || |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  13252046 gaaaatttacctcaagcaaacaactctgggtaagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 13252145  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  13252146 tcacgagaggtatc 13252159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 14974221 - 14974334
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || ||||||||||  | ||| | ||||||||||     
T  14974221 gaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagctcccacgtgaagctttcaccagtggatccgtaccaaacgactc 14974320  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  14974321 tcacaagaggtatc 14974334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 15403284 - 15403171
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| || |||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  15403284 gaaaatttacctcaagcaaacaactctggataagactccagcattttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 15403185  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  15403184 tcacgagaggtatc 15403171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 15590166 - 15590053
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||| |||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  15590166 gaaaatttacctcaagcaaacaactctagataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 15590067  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  15590066 tcacgagaggtatc 15590053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 17489206 - 17489319
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| || ||||  ||||||||||| | ||||||| | || |||||||||| |||||  ||||||||||||     
T  17489206 gaaaatttacctcaagcaaacaactctggataagattccaacatcttactctctagctcccacgttaagctttcaccagtcgctctgtcccaaacgactc 17489305  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  17489306 tcacaagaggtatc 17489319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 20062828 - 20062715
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||  |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  20062828 gaaaatttacctcaagcaaacaactctggattagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 20062729  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  20062728 tcacgagaggtatc 20062715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 26793173 - 26793060
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||| |||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  26793173 gaaaatttacctcaagcaaacaactatggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 26793074  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  26793073 tcacgagaggtatc 26793060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 16757338 - 16757246
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| |||| |||||||||    
T  16757338 aactatggatacgactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatc 16757246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 53385771 - 53385679
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||||||||||| ||||||||||| | ||||||| |||| ||||| |||| ||||||   |||||||||| |||| |||||||||    
T  53385771 aactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatc 53385679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 11961767 - 11961684
Alignment:
Q  255 tacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||| | ||||||||||||| ||||||  |||||||||||| || ||||||  ||||||||||| ||||||||||||||    
T  11961767 tacgactcccggatcttactctccagctcccaagtcaaactttcactagtcgctccaccccaaacgactctcacaagaggtatc 11961684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 10383379 - 10383445
Alignment:
Q  272 actctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||| ||||||  ||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  10383379 actctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaagaggtatc 10383445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 16338816 - 16338710
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  ||||||||||||||| || |||  |||| |||||| |||||||    
T  16338816 tacctcaaacaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgttccaccccagacgactctcacaag 16338717  T
Q  332 aggtatc 338  Q
    |||||||    
T  16338716 aggtatc 16338710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 16691516 - 16691614
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgact 323  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| | || |||||||||| ||||||  |||||||||||    
T  16691516 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgttaagctttcaccagtcgctccagcccaaacgact 16691614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 16810730 - 16810828
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgact 323  Q
    |||||| |||||||  |||| ||||||||||| ||| | || ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||    
T  16810730 gaaaatttacctcaagcaaacaactctggataagacgctagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccgtcccaaacgact 16810828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 15349003 - 15348906
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| | || |||||||||    
T  15349003 caaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactcttacgagaggtatc 15348906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 15725691 - 15725594
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||    |||||||||| |||| |||||||||    
T  15725691 caaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctctcgtccaaacgactctcacgagaggtatc 15725594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 338
Target Start/End: Complemental strand, 16492954 - 16492842
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    ||||| |||||||  |||| ||||||||||| || ||||| ||||||||||| | ||| ||| |||| |||||||||| |||| | ||||||||| || |    
T  16492954 aaaatttacctcaagcaaacaactctggatatgattccagcatcttactctctagctcgcacgtcaagctttcaccagtcgcttcgtcccaaacgtctct 16492855  T
Q  326 cacaagaggtatc 338  Q
    || ||||||||||    
T  16492854 cataagaggtatc 16492842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 13972876 - 13972770
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| ||||||||| | |||||||| |||| ||||||  | |||||||| |||| ||||||  ||||||||||| |||||||    
T  13972876 tacctcaaacaaacaactctgggtacgactcccgcatcttactttccagctcccaagttaaactttctccagtcgctccaccccaaacgactctcacaag 13972777  T
Q  332 aggtatc 338  Q
     ||||||    
T  13972776 cggtatc 13972770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 14086046 - 14086152
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| ||||||||| | |||||||| |||| ||||||  | |||||||| |||| ||||||  ||||||||||| |||||||    
T  14086046 tacctcaaacaaacaactctgggtacgactcccgcatcttactttccagctcccaagttaaactttctccagtcgctccaccccaaacgactctcacaag 14086145  T
Q  332 aggtatc 338  Q
     ||||||    
T  14086146 cggtatc 14086152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 11297297 - 11297184
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| || ||| |||| |||||||| ||||||||||| | ||||||| |||| |||||| ||| |||||| ||| |||||| |     
T  11297297 gaaaatttacctcaagcaaacaaatctagataagactccagcatcttactctcaagctcccacgtcaagctttcatcagtcgctccgtcctaaacgattc 11297198  T
Q  325 tcacaagaggtatc 338  Q
    ||||||| ||||||    
T  11297197 tcacaaggggtatc 11297184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 13323408 - 13323302
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||| ||  | ||||||||||||| || |||  |||||||||||  || ||||||  ||||||||||| |||||||    
T  13323408 tacctcaaacaaacaactcaggatacgattcttgcatcttactctccagcttccaagtcaaactttcagtagtcgctccaccccaaacgactctcacaag 13323309  T
Q  332 aggtatc 338  Q
    |||||||    
T  13323308 aggtatc 13323302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 16381683 - 16381578
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| || ||| | |||||||| |||| ||||||  |||| |||||||||| ||||||  ||||||||||| |||||||    
T  16381683 tacctcaaacaaacaactcaggatatgaatcccgcatcttactttccagctcccaagtcaagctttcaccagtcgctccgccccaaacgactctcacaag 16381584  T
Q  332 aggtat 337  Q
     |||||    
T  16381583 gggtat 16381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 16807676 - 16807587
Alignment:
Q  249 tctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||| |||||||| ||||||||||| | ||||||  |||| |||||||||| ||||||  ||| ||||||| | ||||| ||||||    
T  16807676 tctggataagactccagcatcttactctcaagctcccatgtcaagctttcaccagtcgctccagccctaacgactctaacaaggggtatc 16807587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 11852919 - 11852991
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaacttt 297  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| ||||    
T  11852919 gaaaatttacctcaagcaaaaaactctggataagactccagcatcttactctctagctcccacgtcaagcttt 11852991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 12478466 - 12478398
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcac 300  Q
    ||||||| ||||| |||||||||||||||||| | || |||||||||| ||||||  ||||||| ||||    
T  12478466 tacctcaatcaaacaactctggatacgactcccgcattttactctccagctcccaagtcaaactctcac 12478398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 12854604 - 12854543
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccag 303  Q
    |||| ||||||||||| |||||||| ||||||||||||| || |||  |||||||||||||||    
T  12854604 caaacaactctggataagactccagcatcttactctccagct-ccatgtcaaactttcaccag 12854543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 14571221 - 14571290
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||||||||| |||||| | ||||||||||| | ||||||  |||||||||||||    
T  14571221 tacctcaaacaaacaactctggataagactcccgcatcttactctctagctcccaagtcaaactttcacc 14571290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 16837260 - 16837155
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| || ||| | |||||||| |||| ||||||  |||| |||||||||  ||||||  ||||||||||| |||||||    
T  16837260 tacctcaaacaaacaactcaggatatgaatcccgcatcttactttccagctcccaagtcaagctttcaccaatcgctccgccccaaacgactctcacaag 16837161  T
Q  332 aggtat 337  Q
     |||||    
T  16837160 gggtat 16837155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 6609816 - 6609868
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctc 277  Q
    |||||| |||||||  |||| ||||||||||| |||||||| |||||||||||    
T  6609816 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctc 6609868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 11304529 - 11304461
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcac 300  Q
    ||||||| ||||| | ||||||||| |||||| | ||||||||||||| ||||||  ||||||| ||||    
T  11304529 tacctcaatcaaacagctctggataagactcccgcatcttactctccagctcccaagtcaaactctcac 11304461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 13515 - 13402
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||||||| || | |||| ||||||||||| |||||||| |||||||| |||||||||||| | || ||||||||||||| |||||||||||||||||    
T  13515 gaaaatgtacttcgtgcaaacaactctggataagactccagcatcttactttccaactcccacgttaagctttcaccagccgatccttcccaaacgactt 13416  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  13415 tcacaagaggtatc 13402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 19167475 - 19167362
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||  ||||||||||| |||||||| |||||||| |||||||||||| | ||||||||||||| ||||||| ||||||||| ||    
T  19167475 gaaaatgtacctcatgcaatcaactctggataagactccagcatcttactttccaactcccacgttaaactttcaccagtcgctcctccccaaacgattt 19167376  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  19167375 tcacaagaggtatc 19167362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 27332113 - 27332000
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || |||||||||| |||||||||||||||||||     
T  27332113 gaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagctcccacgttaagctttcaccagtcgctccttcccaaacgactc 27332014  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  27332013 tcacaagaggtatc 27332000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 27392853 - 27392740
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || |||||||||| |||||||||||||||||||     
T  27392853 gaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagctcccacgttaagctttcaccagtcgctccttcccaaacgactc 27392754  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  27392753 tcacaagaggtatc 27392740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 24364020 - 24364126
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||||||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  24364020 tacctcaagcaaataactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 24364119  T
Q  332 aggtatc 338  Q
    |||||||    
T  24364120 aggtatc 24364126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 23078070 - 23078183
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||| ||||| || ||||| ||||||||||||||||||||| | || |||||||||| |||||| ||  |||||||||    
T  23078070 gaaaatttacctcatgcaaacaactcaggataagattccagcatcttactctccaactcccacgttaagctttcaccagtcgctccgtcttaaacgactt 23078169  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  23078170 tcacaagaggtatc 23078183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 21564805 - 21564699
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||| | |||||||| |||| ||||||  ||||||||||||||| |||||| |||||||||||| |||||||    
T  21564805 tacctcaagcaaacaactctggataagactcccgcatcttactttccagctcccaagtcaaactttcaccagtcgctccatcccaaacgactctcacaag 21564706  T
Q  332 aggtatc 338  Q
    |||||||    
T  21564705 aggtatc 21564699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 25610525 - 25610432
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagagg 334  Q
    |||| ||||||||||| ||||| || ||||||||||| | ||||||| | || |||||||||||||||||||||||||||||| ||||||||||    
T  25610525 caaacaactctggataagactctagcatcttactctctagctcccacgttaagctttcaccagccgctccttcccaaacgactctcacaagagg 25610432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 1640404 - 1640510
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||| || |||| ||||||||||| |||||||| |||||||||||||  |||||  ||||||||||||||| ||||||| ||||||||| ||| || ||    
T  1640404 taccttatgcaaacaactctggataagactccagcatcttactctccagttcccatgtcaaactttcaccagtcgctcctccccaaacgaattttactag 1640503  T
Q  332 aggtatc 338  Q
    |||||||    
T  1640504 aggtatc 1640510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 2875483 - 2875370
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  2875483 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 2875384  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  2875383 tcacgagaggtatc 2875370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 16550841 - 16550728
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  16550841 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 16550742  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  16550741 tcacgagaggtatc 16550728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 16627397 - 16627284
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  16627397 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 16627298  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  16627297 tcacgagaggtatc 16627284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 17025978 - 17025873
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||   ||||| ||||||| || ||||| ||    
T  17025978 tacctcaagcaaacaactctggataagactccagcatcttactctccaactcccaagtcaaactttcaccagttactcctccccaaacaaccttcactag 17025879  T
Q  332 aggtat 337  Q
    ||||||    
T  17025878 aggtat 17025873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 24313848 - 24313735
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  24313848 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 24313749  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  24313748 tcacgagaggtatc 24313735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 29592600 - 29592487
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  29592600 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 29592501  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  29592500 tcacgagaggtatc 29592487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 16964047 - 16963935
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||  |||||||||||     
T  16964047 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccagcccaaacgactc 16963948  T
Q  325 tcacaagaggtat 337  Q
    | ||||| |||||    
T  16963947 taacaaggggtat 16963935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 18794298 - 18794404
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| ||||||| | | |||||||||||||||||| |  | ||||||||||||| ||||||  ||||||||||| |||||||    
T  18794298 tacctcaaacaaacaactctgggtacgactgccgcatcttactctccaactcctaagttaaactttcaccagtcgctccaccccaaacgactctcacaag 18794397  T
Q  332 aggtatc 338  Q
    |||||||    
T  18794398 aggtatc 18794404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 1543764 - 1543651
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| | ||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  1543764 gaaaatttacctcaagcaaacagctctggataggactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 1543665  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  1543664 tcacgagaggtatc 1543651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 18408623 - 18408510
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| || ||||| ||||||| ||| | ||||||| | || |||||||||| | |||| ||||||||||||     
T  18408623 gaaaatttacctcaagcaaacaactctggataagattccagcatcttacactctagctcccacgttaagctttcaccagtcactccgtcccaaacgactc 18408524  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  18408523 tcacaagaggtatc 18408510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 19864315 - 19864400
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctcc 310  Q
    |||||| |||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||    
T  19864315 gaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcc 19864400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 21471209 - 21471314
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||||| ||||||||||||| ||||||  |||||||||||||||   ||||| ||||||| || ||||| ||    
T  21471209 tacctcaagcaaacaactctggataagactccagcatcttactctccagctcccatgtcaaactttcaccagttactcctccccaaacaaccttcactag 21471308  T
Q  332 aggtat 337  Q
    ||||||    
T  21471309 aggtat 21471314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 21833654 - 21833549
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||||| ||||||||||| | || |||| |||| |||||||||| |||||| |||||||||||| | |||||    
T  21833654 tacctcaagcaaacaactctggataagactccagcatcttactctctagcttccacgtcaagctttcaccagtcgctccatcccaaacgactctaacaag 21833555  T
Q  332 aggtat 337  Q
     |||||    
T  21833554 gggtat 21833549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 22433598 - 22433711
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||| |||||| |||||||  ||||||||||| | ||||||| |||| |||||||||| | |||| ||||||||||||     
T  22433598 gaaaatttacctcaagcaaacaactatggataagactccaacatcttactctctagctcccacgtcaagctttcaccagtctctccgtcccaaacgactc 22433697  T
Q  325 tcacaagaggtatc 338  Q
    | ||||||||||||    
T  22433698 ttacaagaggtatc 22433711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 351
Target Start/End: Complemental strand, 28293031 - 28292926
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatccgctttc 345  Q
    |||||||||||||||||||| ||||||||||| | ||||||| |||| ||||| |||| ||||||   |||||||||| |||| |||||||||  ||| |    
T  28293031 aactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatctccttgc 28292932  T
Q  346 ccctca 351  Q
    ||||||    
T  28292931 ccctca 28292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 16928320 - 16928208
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| | ||||  |||||||||||     
T  16928320 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcactccagcccaaacgactc 16928221  T
Q  325 tcacaagaggtat 337  Q
    | ||||| |||||    
T  16928220 taacaaggggtat 16928208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 28263856 - 28263764
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||||||||||| ||||||||||| | ||||||| |||| ||||| |||| ||||||   |||||||||| |||| |||||||||    
T  28263856 aactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatc 28263764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 28342605 - 28342513
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||||||||||| ||||||||||| | ||||||| |||| ||||| |||| ||||||   |||||||||| |||| |||||||||    
T  28342605 aactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatc 28342513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 27187058 - 27187149
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||||||||||||||||||| ||||||||||| | ||||||| |||| ||||| |||| ||||||   |||||||||| |||| ||||||||    
T  27187058 aactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtat 27187149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 27262182 - 27262091
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||||||||||||||||||| ||||||||||| | ||||||| |||| ||||| |||| ||||||   |||||||||| |||| ||||||||    
T  27262182 aactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtat 27262091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 18198197 - 18198100
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| ||| |||| ||||||||||| | |||| |||| || |||||||||| |||||| |||||||| |||||||  |||||||||    
T  18198197 caaacaactctggataagacaccagcatcttactctctagctccaacattaagctttcaccagtcgctccgtcccaaacaactttcattagaggtatc 18198100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 22079338 - 22079225
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| ||||| || |||| |||| |||||| || | || ||||||||| || | ||||||| | || |||||||||| |||||| ||||||||||||     
T  22079338 gaaaatttaccttatgcaaacaactttggataagatttcaatatcttactttctagctcccacgttaagctttcaccagtcgctccgtcccaaacgactc 22079239  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  22079238 tcacaagaggtatc 22079225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 25112153 - 25112266
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| ||| | || ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  25112153 gaaaatttacctcaagcaaacaactctggataagacactagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 25112252  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  25112253 tcacgagaggtatc 25112266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 25765962 - 25765857
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||| |||| |||||||| ||||||||||| | ||||||||| || |||||||||| ||||||  ||||||||||| | |||||    
T  25765962 tacctcaagcaaacaactctagataagactccagcatcttactctcaagctcccacataaagctttcaccagtcgctccagcccaaacgactctaacaag 25765863  T
Q  332 aggtat 337  Q
     |||||    
T  25765862 gggtat 25765857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 8766821 - 8766752
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| |||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||    
T  8766821 tacctcaagcaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaactttcacc 8766752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 17032163 - 17032276
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || ||||||| || ||||||   ||||||||||     
T  17032163 gaaaatttacctcaagcaaacaactctggataagattccagcatcttactctcaagctcccacgttaagctttcacaagtcgctcccgtccaaacgactc 17032262  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  17032263 tcacgagaggtatc 17032276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 22763134 - 22763022
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||| |||||| || || || ||||||||||| | ||||||||| || ||||||| || |||||  ||||||||||||     
T  22763134 gaaaatttacctcaagcaaacaactatggataagattc-agcatcttactctctagctcccacattaagctttcacaagtcgctctgtcccaaacgactc 22763036  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  22763035 tcacaagaggtatc 22763022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 12497627 - 12497739
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||| |||| |||||||| ||||||||||| | ||||||| | || |||||||||  ||||||  |||||||||||     
T  12497627 gaaaatttacctcaagcaaacaactctagataagactccagcatcttactctcaagctcccacgttaagctttcaccaatcgctccagcccaaacgactc 12497726  T
Q  325 tcacaagaggtat 337  Q
    | ||||| |||||    
T  12497727 taacaaggggtat 12497739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 12511274 - 12511162
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||| |||| |||||||| ||||||||||| | ||||||| | || |||||||||  ||||||  |||||||||||     
T  12511274 gaaaatttacctcaagcaaacaactctagataagactccagcatcttactctcaagctcccacgttaagctttcaccaatcgctccagcccaaacgactc 12511175  T
Q  325 tcacaagaggtat 337  Q
    | ||||| |||||    
T  12511174 taacaaggggtat 12511162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 10469498 - 10469416
Alignment:
Q  255 tacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||| | ||||||||||||| ||||||  ||||||||||||||| || |||  |||| |||||| ||||||||||||||    
T  10469498 tacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcg-tccaccccagacgactctcacaagaggtatc 10469416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 25750417 - 25750488
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccag 303  Q
    |||||||  |||| |||||| ||||||||||||| ||||||||| ||| ||||||  |||||||||||||||    
T  25750417 tacctcaagcaaacaactcttgatacgactccagcatcttactccccagctcccaagtcaaactttcaccag 25750488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 5839863 - 5839786
Alignment:
Q  261 tccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| |||| |||||||||    
T  5839863 tccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatc 5839786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 11288271 - 11288165
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||  | ||||||||||||||||||||  | | |||||||||||  |||||  ||||||| ||| | |||||    
T  11288271 tacctcaaacaaacaactcagggtacgactcttgcatcttactctccaactcccaagttagactttcaccagttgctccaccccaaacaactcttacaag 11288172  T
Q  332 aggtatc 338  Q
    |||||||    
T  11288171 aggtatc 11288165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 18932413 - 18932475
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccac 287  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | |||||||    
T  18932413 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccac 18932475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 19878906 - 19879012
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||  | ||||||||||||||||||||  | | |||||||||||  |||||  ||||||| ||| | |||||    
T  19878906 tacctcaaacaaacaactcggggtacgactcttgcatcttactctccaactcccaagttagactttcaccagttgctccaccccaaacaactcttacaag 19879005  T
Q  332 aggtatc 338  Q
    |||||||    
T  19879006 aggtatc 19879012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 18787496 - 18787565
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  ||||||||||||||||||||||| | |||||||| || | ||||||  |||||||| ||||    
T  18787496 tacctcaaacaaataactctggatacgactcccgcatcttactttctagctcccaagtcaaacttgcacc 18787565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 28949192 - 28949305
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||| ||| ||||| || |||||||| ||   ||| ||| | |||||||||||   |||||||  ||||||||| |    
T  28949192 gaaaatatacctcatgcaaacaactctgaataagactctagcatcttactttctcgctctcacgttaaactttcaccgatcgctcctctccaaacgacct 28949291  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||| ||||    
T  28949292 tcacaagagatatc 28949305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 226 - 338
Target Start/End: Original strand, 16756 - 16868
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    |||||||||||||| | || ||||||||||| |||||||  ||||||||||| | ||||||| | || ||||||||||||||||||||||||||||||||    
T  16756 aaaatgtacctcatgcgaacaactctggataagactccaacatcttactctctagctcccacgttaagctttcaccagccgctccttcccaaacgacttt 16855  T
Q  326 cacaagaggtatc 338  Q
    |||||||||||||    
T  16856 cacaagaggtatc 16868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 228818 - 228924
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||   ||||||| | || |||||||||| |||||||||||||||||||||||||||    
T  228818 tacctcatgcaaacaactctggataagactccagtatcttactctctggctcccacgttaagctttcaccagtcgctccttcccaaacgactttcacaag 228917  T
Q  332 aggtatc 338  Q
    |||||||    
T  228918 aggtatc 228924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 219939 - 219842
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| || || || |||| ||||||| | || ||||||||||||||||| ||||| ||||||| |||| ||||||||    
T  219939 caaacaactctggataagactccagcattttgctttccatctcccacgttaagctttcaccagccgctccgtcccatacgacttgcacatgaggtatc 219842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 447827 - 447940
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||| | |||| ||||||||||| |||| ||| ||||||||||| | ||||||||| || |||| ||||||||||||||||||||||||||    
T  447827 gaaaatttacctcgtgcaaacaactctggataagacttcagcatcttactctctagctcccacattaagcttttaccagccgctccttcccaaacgactt 447926  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  447927 tcacaagaggtatc 447940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 161881 - 161994
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||  ||||||||||| || ||||| ||||||| ||| | ||||||| | || | |||||||| |||||||| |||||| |||     
T  161881 gaaaatttacctcaagcaaccaactctggataggattccagcatcttacgctctagctcccacgttaagcgttcaccagtcgctcctttccaaacaactc 161980  T
Q  325 tcacaagaggtatc 338  Q
    ||||||| ||||||    
T  161981 tcacaagtggtatc 161994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 91458 - 91387
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccag 303  Q
    |||||||  |||| ||||| ||||| |||||| | ||||||||||||| ||||||  |||||||||||||||    
T  91458 tacctcaagcaaacaactcaggataagactcctgcatcttactctccagctcccaagtcaaactttcaccag 91387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 23948692 - 23948805
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||   ||| |||| |||||| |||||||  |||||||| ||||||||| || | ||||||||||||||||||||||||||||||||||    
T  23948692 gaaaatgtacctcaagaaaacaactttggataagactccaacatcttactttccaactccgacgttaaactttcaccagccgctccttcccaaacgactt 23948791  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  23948792 tcacaagaggtatc 23948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 20397103 - 20396990
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| |||||||  |||||||| |||||||||||| | || |||||||||| ||||||| || ||||||| |    
T  20397103 gaaaatgtacctcatgcaaaaaactctggataagactccatcatcttactttccaactcccacgttaacctttcaccagtcgctcctccctaaacgacct 20397004  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  20397003 tcacaagaggtatc 20396990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 21250745 - 21250858
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| |||||||| || | ||||||| |||| ||||||||||||||||| ||||||||||||     
T  21250745 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactttctagctcccacgtcaagctttcaccagccgctccgtcccaaacgactc 21250844  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  21250845 tcacaagaggtatc 21250858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 22179536 - 22179423
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||  || ||||| ||||||||||| | ||||||| | || |||||||||| ||||||||||||||||||||    
T  22179536 gaaaatttacctcatgcaaacaactctggattagattccagcatcttactctctagctcccacgttaagctttcaccagtcgctccttcccaaacgactt 22179437  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  22179436 tcacaagaggtatc 22179423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 22433230 - 22433124
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||| |||| ||||||||||| |||||||  ||||||||||||| ||||||  ||||||||||||||| ||||||| ||||| |||||||||| ||    
T  22433230 tacctcatgcaaacaactctggataagactccatcatcttactctccagctcccatgtcaaactttcaccagtcgctcctccccaagcgactttcactag 22433131  T
Q  332 aggtatc 338  Q
    |||||||    
T  22433130 aggtatc 22433124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 19900347 - 19900460
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||  ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  19900347 gaaaatttacctcaagcaagcaactctggataagactccagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactc 19900446  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  19900447 tcacaagaggtatc 19900460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 804647 - 804541
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  804647 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctcccccccaaacgactctcacaag 804548  T
Q  332 aggtatc 338  Q
    |||||||    
T  804547 aggtatc 804541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 6603465 - 6603571
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||| ||||||||| ||||||  ||||||||||||||||||||||  ||||||||||| |||||||    
T  6603465 tacctcaagcaaacaactccggatacgactcccgcatcctactctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaag 6603564  T
Q  332 aggtatc 338  Q
    |||||||    
T  6603565 aggtatc 6603571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 6678918 - 6679024
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  6678918 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 6679017  T
Q  332 aggtatc 338  Q
    |||||||    
T  6679018 aggtatc 6679024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 14564949 - 14565055
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  14564949 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 14565048  T
Q  332 aggtatc 338  Q
    |||||||    
T  14565049 aggtatc 14565055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 16265589 - 16265483
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  16265589 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 16265490  T
Q  332 aggtatc 338  Q
    |||||||    
T  16265489 aggtatc 16265483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 20387923 - 20388029
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||| |||| ||||||||||| |||||||| |||||||||||||  |||||  |||||||||||||| |||||||| ||||||||||||| ||  |    
T  20387923 tacctcatgcaaacaactctggataagactccagcatcttactctccagttcccatgtcaaactttcaccaaccgctcctccccaaacgacttttactgg 20388022  T
Q  332 aggtatc 338  Q
    |||||||    
T  20388023 aggtatc 20388029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 27347033 - 27347139
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  27347033 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 27347132  T
Q  332 aggtatc 338  Q
    |||||||    
T  27347133 aggtatc 27347139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 21167515 - 21167402
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||| |||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  21167515 gaaaatttacctcaagcaaacaactttggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactc 21167416  T
Q  325 tcacaagaggtatc 338  Q
    ||||||| ||||||    
T  21167415 tcacaaggggtatc 21167402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 21394827 - 21394730
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| |||||||||||| ||| ||||||||||    
T  21394827 caaacaactctggataagactccagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactctcagaagaggtatc 21394730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 21789320 - 21789223
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| |||||||||||| ||| ||||||||||    
T  21789320 caaacaactctggataagactccagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactctcagaagaggtatc 21789223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 21922713 - 21922600
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||  | ||||||| | || |||||||||| |||||| ||||||||||||     
T  21922713 gaaaatttacctcatgcaaacaactctggataagattccagcatcttactctttagctcccacgttaagctttcaccagtcgctccgtcccaaacgactc 21922614  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  21922613 tcacaagaggtatc 21922600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 28982164 - 28982269
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  28982164 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 28982263  T
Q  332 aggtat 337  Q
    ||||||    
T  28982264 aggtat 28982269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 28987384 - 28987489
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  28987384 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 28987483  T
Q  332 aggtat 337  Q
    ||||||    
T  28987484 aggtat 28987489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 12304582 - 12304674
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||||||||||  | ||||||||| ||||||||||||||    
T  12304582 aactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagccgctccacctcaaacgactctcacaagaggtatc 12304674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 12912928 - 12912836
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| ||||||||||||||    
T  12912928 aactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatc 12912836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 19485848 - 19485735
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||   ||| |||||||||||||||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  19485848 gaaaatttacctcaagtaaacaactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 19485749  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  19485748 tcacgagaggtatc 19485735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 20018728 - 20018615
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  20018728 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 20018629  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  20018628 tcacgagaggtatc 20018615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 22121152 - 22121039
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  22121152 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 22121053  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  22121052 tcacgagaggtatc 22121039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 29304397 - 29304292
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | |||||||||||||  |||||  ||||||||||||||| |||||| |||||||||||| |||||||    
T  29304397 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagttcccaagtcaaactttcaccagtcgctccatcccaaacgactctcacaag 29304298  T
Q  332 aggtat 337  Q
     |||||    
T  29304297 gggtat 29304292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 16409023 - 16408911
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| ||||| || ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  16409023 gaaaatttacctcaagcaaacaactctggataagactcgagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactc 16408924  T
Q  325 tcacaagaggtat 337  Q
    | ||||| |||||    
T  16408923 taacaaggggtat 16408911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 22165169 - 22165071
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgact 323  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||  |||||||||||    
T  22165169 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccaacccaaacgact 22165071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 19112493 - 19112606
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||| ||||| ||||||   ||||||||||     
T  19112493 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagcttttaccagtcgctcccgaccaaacgactc 19112592  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  19112593 tcacgagaggtatc 19112606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 19977770 - 19977883
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||  ||||||||||| | ||||||| |||| ||||||| || |||||| | |||||||||      
T  19977770 gaaaatttacctcaagcaaacaactctggataagactccaacatcttactctctagctcccacgtcaagctttcactagtcgctccgttccaaacgaccc 19977869  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  19977870 tcacaagaggtatc 19977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 267 - 336
Target Start/End: Complemental strand, 22062318 - 22062249
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggta 336  Q
    ||||||||||||| ||||||  ||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  22062318 atcttactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactttcacaaggggta 22062249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 32599947 - 32600043
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacga 321  Q
    |||||| |||||||  |||||||||||||||| |||||||| ||||||||||| | ||||||| | || |||||||||| ||||||  |||||||||    
T  32599947 gaaaatttacctcaagcaaataactctggataagactccagcatcttactctcaagctcccacgttaagctttcaccagtcgctccagcccaaacga 32600043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 22179008 - 22179099
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    ||||||||||| || ||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| ||||||| |||||    
T  22179008 aactctggataagaatcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccgccccaaacgactctcacaaggggtat 22179099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 15440984 - 15441082
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgact 323  Q
    |||||| |||||||  |||| ||||||||||| |||||||| |||||||| || | ||||||| |||| |||||||||| ||||||  |||||||||||    
T  15440984 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactttcaagctcccacgtcaagctttcaccagtcgctccagcccaaacgact 15441082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 15533183 - 15533281
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgact 323  Q
    |||||| |||||||  |||| ||||||||||| |||||||| |||||||| || | ||||||| |||| |||||||||| ||||||  |||||||||||    
T  15533183 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactttcaagctcccacgtcaagctttcaccagtcgctccagcccaaacgact 15533281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 22031842 - 22031948
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| ||||| || ||||||||||| | ||||||| |||| |||||||||| ||||||  ||||||||||| | |||||    
T  22031842 tacctcaagcaaacaactctggataagactcaagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccagcccaaacgactctaacaag 22031941  T
Q  332 aggtatc 338  Q
     ||||||    
T  22031942 gggtatc 22031948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 17675001 - 17674888
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| || |||||||| |||||||| ||||||||||| | ||||||| |||| ||||||| || ||||||   ||||||||||     
T  17675001 gaaaatttacctcaagcaaacaattctggataagactccagcatcttactctcaagctcccacgtcaagctttcactagtcgctcccgtccaaacgactc 17674902  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  17674901 tcacgagaggtatc 17674888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 22046177 - 22046290
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| || |||||||| ||||| || ||||||||||| | ||||||| |||| |||||||||| ||||||  |||||||||||     
T  22046177 gaaaatttacctcaagcaaacaaatctggataagactcaagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccagcccaaacgactc 22046276  T
Q  325 tcacaagaggtatc 338  Q
    | ||||| ||||||    
T  22046277 taacaaggggtatc 22046290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 20010871 - 20010800
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccag 303  Q
    |||||||  |||| ||||||||||| |||||||| ||||||||||||| ||||||  |||||||||||||||    
T  20010871 tacctcaagcaaacaactctggataagactccagcatcttactctccagctcccaagtcaaactttcaccag 20010800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 19851221 - 19851326
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||| | ||| ||||||||| ||||||  |||||||||||||||   ||||| ||||||| || ||||| ||    
T  19851221 tacctcaagcaaacaactctggataagactcccgcatcgtactctccagctcccaagtcaaactttcaccagttactcctccccaaacaaccttcactag 19851320  T
Q  332 aggtat 337  Q
    ||||||    
T  19851321 aggtat 19851326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 19857257 - 19857362
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||| | ||| ||||||||| ||||||  |||||||||||||||   ||||| ||||||| || ||||| ||    
T  19857257 tacctcaagcaaacaactctggataagactcccgcatcgtactctccagctcccaagtcaaactttcaccagttactcctccccaaacaaccttcactag 19857356  T
Q  332 aggtat 337  Q
    ||||||    
T  19857357 aggtat 19857362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 20007660 - 20007729
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| |||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||    
T  20007660 tacctcaagcaaacaactctggatacgactcctgcatcttactctccagctcccaagtcaaactttcacc 20007729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 22987073 - 22987117
Alignment:
Q  294 ctttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  22987073 ctttcaccagtcgctccgtcccaaacgactttcacaagaggtatc 22987117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 337
Target Start/End: Complemental strand, 30314106 - 30314010
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||| ||||||||||| |||||||  ||||||||||| | ||| ||| |||| |||||||||| ||||||  ||||||||||| | ||||| |||||    
T  30314106 caaacaactctggataagactccaacatcttactctcaagctctcacgtcaagctttcaccagtcgctccagcccaaacgactctaacaaggggtat 30314010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 22134019 - 22133913
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||| ||| |||| ||| ||||||||||| |  |||||| |||| |||||||||| ||||||  || |||||||||    
T  22134019 gaaaatttacctcaagcaaacaactctgtataagactacagcatcttactctcaagttcccacgtcaagctttcaccagtcgctccagcctaaacgactt 22133920  T
Q  325 tcacaag 331  Q
    | |||||    
T  22133919 taacaag 22133913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 21325381 - 21325312
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| |||||||||||||||||| | |||||||||||||  |||||  |||||||||||||    
T  21325381 tacctcaaacaaacaactctggatacgactcccgcatcttactctccagttcccaagtcaaactttcacc 21325312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 31417445 - 31417340
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| ||||||||| | ||||||||||| | ||||||  ||||||| |||||||   ||||  ||||||| |||||||| ||    
T  31417445 tacctcaaacaaacaactctgggtacgactcccgcatcttactctctagctcccaagtcaaactctcaccagttactccaccccaaacaactttcactag 31417346  T
Q  332 aggtat 337  Q
    ||||||    
T  31417345 aggtat 31417340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 20972781 - 20972718
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaact 295  Q
    |||||||  |||| |||||||||||||||||| | ||||||||||||| ||||||  |||||||    
T  20972781 tacctcaaacaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaact 20972718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 20136530 - 20136643
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| ||||||||| | || |||||||||| |||||||||||||||||||     
T  20136530 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctctaactcccacgttaagctttcaccagtcgctccttcccaaacgactc 20136629  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  20136630 tcacaagaggtatc 20136643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 19761452 - 19761360
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||| |||||||| || ||||| || ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||    
T  19761452 aactctggataagactccagcattttactttctaactcccacgttaaactttcaccatccgctccttcccaaacgactttcacaagaggtatc 19761360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 50613016 - 50612910
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||| |||| ||||||||||| || ||||| ||||||||||||||||||||| | || |||||||||| |||||  | ||||||||||||||||||    
T  50613016 tacctcatgcaaacaactctggataagattccagcatcttactctccaactcccacgttaagctttcaccagtcgctctgttccaaacgactttcacaag 50612917  T
Q  332 aggtatc 338  Q
    |||||||    
T  50612916 aggtatc 50612910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 50620844 - 50620738
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||| |||| ||||||||||| || ||||| ||||||||||||||||||||| | || |||||||||| |||||  | ||||||||||||||||||    
T  50620844 tacctcatgcaaacaactctggataagattccagcatcttactctccaactcccacgttaagctttcaccagtcgctctgttccaaacgactttcacaag 50620745  T
Q  332 aggtatc 338  Q
    |||||||    
T  50620744 aggtatc 50620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 20294171 - 20294277
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  20294171 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 20294270  T
Q  332 aggtatc 338  Q
    |||||||    
T  20294271 aggtatc 20294277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 334
Target Start/End: Complemental strand, 31550781 - 31550679
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  31550781 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 31550682  T
Q  332 agg 334  Q
    |||    
T  31550681 agg 31550679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 37676835 - 37676941
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||| ||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  37676835 tacctcaagcaaacaactccggatacgactcccgcatcctactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 37676934  T
Q  332 aggtatc 338  Q
    |||||||    
T  37676935 aggtatc 37676941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 16351206 - 16351093
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||   ||| |||||||||||||||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  16351206 gaaaatttacctcaagtaaacaactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 16351107  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  16351106 tcacgagaggtatc 16351093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 20243959 - 20244064
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| || ||| | ||||||||||||| ||||||  ||||||||||||||| |||||| |||||||||||| |||||||    
T  20243959 tacctcaaacaaacaactctggataagaatcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacaag 20244058  T
Q  332 aggtat 337  Q
     |||||    
T  20244059 gggtat 20244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 21747287 - 21747400
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| |||||| |||| || ||||| |||||||| || | ||||||| | || |||||||||| |||||| ||||||||||||     
T  21747287 gaaaatttacctcatgcaaacaactctagataagattccagcatcttactttctagctcccacgttaagctttcaccagtcgctccgtcccaaacgactc 21747386  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  21747387 tcacaagaggtatc 21747400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 21836702 - 21836815
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  21836702 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 21836801  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  21836802 tcacgagaggtatc 21836815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 41355076 - 41354963
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||   ||| |||||||||||||||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  41355076 gaaaatttacctcaagtaaacaactctggatacgactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 41354977  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  41354976 tcacgagaggtatc 41354963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 51334100 - 51333987
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  51334100 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 51334001  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  51334000 tcacgagaggtatc 51333987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 20249610 - 20249714
Alignment:
Q  233 acctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaaga 332  Q
    |||||| ||||| ||||||||||| || ||||| ||||||||||| | ||||||| | || |||||||||| || ||| |||||||||||| ||||||||    
T  20249610 acctcaatcaaacaactctggataagattccagcatcttactctctagctcccacgttaagctttcaccagtcgttccgtcccaaacgactctcacaaga 20249709  T
Q  333 ggtat 337  Q
    |||||    
T  20249710 ggtat 20249714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 21163032 - 21163144
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||| || ||| ||||||||||| |||||||| ||||||||||| | ||||||| | || |||||||||| |||||| ||| ||||||||     
T  21163032 gaaaatttacctcgtttaaacaactctggataagactccagcatcttactctctagctcccacgttaagctttcaccagtcgctccgtccaaaacgacta 21163131  T
Q  325 tcacaagaggtat 337  Q
    |||| ||||||||    
T  21163132 tcacgagaggtat 21163144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 351
Target Start/End: Complemental strand, 20075662 - 20075543
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||   |||||||||| |||||||    
T  20075662 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccactccaaacgactctcacaag 20075563  T
Q  332 aggtatccgctttcccctca 351  Q
    | |||||  ||| |||||||    
T  20075562 atgtatctccttacccctca 20075543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 19106119 - 19106232
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| | || |||||||||| ||||||   ||||||||||     
T  19106119 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgttaagctttcaccagtcgctcccgtccaaacgactc 19106218  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  19106219 tcacgagaggtatc 19106232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 33391620 - 33391523
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   |||||||||| |||| |||||||||    
T  33391620 caaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatc 33391523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 20395582 - 20395490
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||| |||||| ||||| | ||||||||||||| ||||||  |||||||||||| || ||||||  ||||||||||| ||||||||||||||    
T  20395582 aactccggatacaactcccgcatcttactctccagctcccaagtcaaactttcactagtcgctccaccccaaacgactctcacaagaggtatc 20395490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 21830055 - 21830168
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  | || ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||| |   ||||||||||     
T  21830055 gaaaatttacctcaagcgaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgcttccgtccaaacgactc 21830154  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  21830155 tcacgagaggtatc 21830168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 22433702 - 22433611
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    ||||||||||| || | | | ||||||||||||| ||||||  ||||||| ||||||||||||||  ||||||||||| ||||||| |||||    
T  22433702 aactctggataagaattccgcatcttactctccagctcccaagtcaaactctcaccagccgctccgccccaaacgactctcacaaggggtat 22433611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 16079240 - 16079127
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| | |||||| || | ||||||  |||| |||||||||| ||||||  |||||||||||     
T  16079240 gaaaatttacctcaagcaaacaactctggataagactccagcaacttactttctagctcccatgtcaagctttcaccagtcgctccagcccaaacgactc 16079141  T
Q  325 tcacaagaggtatc 338  Q
    | || |||||||||    
T  16079140 taacgagaggtatc 16079127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 337
Target Start/End: Complemental strand, 19665468 - 19665371
Alignment:
Q  240 tcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    ||||| |||||||||||||||||| | ||||||||||||| ||||||  ||||||| |||||||   ||||  ||||||| || ||||| ||||||||    
T  19665468 tcaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaactctcaccagttactccaccccaaacaaccttcactagaggtat 19665371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 21736512 - 21736581
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| |||||||||||||||||| | ||||||||||||| ||||||  |||||||||||||    
T  21736512 tacctcaaacaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaactttcacc 21736581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 20940649 - 20940558
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||||||||||||||||| | ||||||||||||| ||||||  ||||||| |||| ||   ||||  ||||||| || ||||| ||||||||    
T  20940649 aactctggatacgactcccgcatcttactctccagctcccaagtcaaactctcactagttactccaccccaaacaaccttcactagaggtat 20940558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1832 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1832
Description:

Target: scaffold1832; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 1065 - 1178
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| ||||| || ||| |||| |||| ||||||| | ||||||||||||| ||||||| |||||||||| |    
T  1065 gaaaatgtacctcatgcaaacaactctggataagactctagcatcctactttccagctcccacgttaaactttcaccagtcgctcctccccaaacgacct 1164  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  1165 tcacaagaggtatc 1178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 3800 - 3913
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||| ||||| | ||||||| | || ||||||| ||||||||| | |||||| ||||    
T  3800 gaaaatgtacctcatgcaaacaactctggataagactccagtatctttctctctagctcccacgttaagctttcactagccgctccgtgccaaacaactt 3899  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  3900 tcacaagaggtatc 3913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 16954 - 16841
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||| | ||||||||||||||||| || | ||||||  | || ||||||||||| |||||||||||||||||||    
T  16954 gaaaatttacctcatgcaaacaactctggaaaagactccagtatcttactttctagctcccaagttaagctttcaccagcggctccttcccaaacgactt 16855  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  16854 tcacaagaggtatc 16841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 25609 - 25496
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||| |||||||  |||||| ||||||| ||||    
T  25609 gaaaatatacctcaatcaaacaactctggataagactccagcatcttactctccaactcccacgtcaaactctcaccagttgctcctccccaaacaactt 25510  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||| ||||    
T  25509 tcactagagatatc 25496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 26459 - 26346
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||||| |||| |||||||  ||||||||||||||||||||| |||| |||||||||| ||| || |||||||||||||    
T  26459 gaaaatttacctcaagcaaacaactctagataagactccaacatcttactctccaactcccacgtcaagctttcaccagtcgccccgtcccaaacgactt 26360  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  26359 tcacaagaggtatc 26346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 961 - 1057
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||| ||||| ||||| || ||| | ||||||||||||| ||||||  |||||||||||||||   ||||| ||||||| || || || ||||||||    
T  961 caaacaactcgggataagattcccgcatcttactctccagctcccaagtcaaactttcaccagttactcctccccaaacaacctttactagaggtat 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 117443 - 117330
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| |||||||| |||||||| ||||||||  || | ||||||||||||  ||||||| | ||||||||||    
T  117443 gaaaatgtacctcatgcaaacaactctggataagactccagcatcttactttccaactcttacgttaaactttcaccaatcgctcctcctcaaacgactt 117344  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  117343 tcacaagaggtatc 117330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 1990 - 2103
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||  |||||||||||||  |||||| | || ||||||||||||||||| |||||||||||||    
T  1990 gaaaatttacctcacacaaacaactctggataagactccaacatcttactctccatttcccacgttaagctttcaccagccgctccgtcccaaacgactt 2089  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  2090 tcacaagaggtatc 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 42864 - 42810
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactccca 286  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||    
T  42864 tacctcaatcaaacaactctggatacgactcccgcatcttactctccagctccca 42810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 47930 - 47876
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactccca 286  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||    
T  47930 tacctcaatcaaacaactctggatacgactcccgcatcttactctccagctccca 47876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 17001 - 16890
Alignment:
Q  227 aaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttc 326  Q
    |||| |||||||  |||| ||||||||||| |||||||| ||||||||||||||||||||| | || ||||||| || |||||  |||||||||||||||    
T  17001 aaatttacctcaagcaaacaactctggataagactccagcatcttactctccaactcccacgttaagctttcactagtcgctcagtcccaaacgactttc 16902  T
Q  327 acaagaggtatc 338  Q
    ||||||||||||    
T  16901 acaagaggtatc 16890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 27735 - 27848
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| |||||||  ||||||||||| | ||||||| |||| |||||||||| |||||| |||||||||||      
T  27735 gaaaatttacctcatgcaaacaactctggataagactccaacatcttactctcaagctcccacgtcaagctttcaccagtcgctccgtcccaaacgaccc 27834  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  27835 tcacaagaggtatc 27848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 33290 - 33177
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||| | |||| ||||||||||| || ||||| ||||||||||||||||||||| | || |||||||||| |||||| ||  |||||||||    
T  33290 gaaaatttacctcgtgcaaacaactctggataagattccagcatcttactctccaactcccacgttaagctttcaccagtcgctccgtcttaaacgactt 33191  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  33190 tcacaagaggtatc 33177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 13807 - 13920
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| || |||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  13807 gaaaatttacctcaagcaaacaactctggataagactccagcattttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactc 13906  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  13907 tcacaagaggtatc 13920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 26257 - 26144
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||||||||||| |||| ||||||||||| |||||||  |||||||| |||||||||||  | ||||||||||||| | ||||| |||||| ||| |    
T  26257 gaaaatgtacctcatgcaaacaactctggataagactccaacatcttactttccaactcccatgttaaactttcaccagtccctcctccccaaatgacct 26158  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  26157 tcacaagaggtatc 26144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 40327 - 40214
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  | || ||||||||||| |||||||||||||||||||| | ||||||| |||| ||||||| || |||||| ||||||||||||     
T  40327 gaaaatttacctcaagcgaacaactctggataagactccagtatcttactctctagctcccacgtcaagctttcactagtcgctccatcccaaacgactc 40228  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  40227 tcacaagaggtatc 40214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 65174 - 65287
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||| |||| | |||||||| ||||||||||| | ||||||| |||| ||||| | || ||||||  |||||||||||     
T  65174 gaaaatttacctcaagcaaacaactatggacaagactccagcatcttactctcaagctcccacgtcaagctttctctagtcgctccagcccaaacgactc 65273  T
Q  325 tcacaagaggtatc 338  Q
    | ||||| ||||||    
T  65274 taacaaggggtatc 65287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 14661 - 14758
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | |||||||   ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  14661 caaacaactctggataagactccagcatcttactctctagctcccacgataaactttcaccagtcgctccttcccaaacgaccttcacaagaggtatc 14758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 127737 - 127624
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||| | |||| ||||||||||| || ||||  || |||||||||||||||||| | || |||||||||| |||||| |||||||||||||    
T  127737 gaaaatttacctcttgcaaacaactctggataagattccaacatattactctccaactcccacgttaagctttcaccagtcgctccgtcccaaacgactt 127638  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  127637 tcacaagaggtatc 127624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 179985 - 180098
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| | |||||||||      
T  179985 gaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccgttccaaacgaccc 180084  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  180085 tcacaagaggtatc 180098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 17244 - 17138
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| |||||||    
T  17244 tacctcaagcaaacaactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaag 17145  T
Q  332 aggtatc 338  Q
    |||||||    
T  17144 aggtatc 17138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 5147 - 5034
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  5147 gaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccgctccaaacgactc 5048  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  5047 tcacgagaggtatc 5034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 520 - 407
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  | || ||||||||||| || ||||  ||||||||||| | ||||||| |||| |||||||||| |||||| |||||||||||||    
T  520 gaaaatttacctcaagcgaacaactctggataagattccaacatcttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactt 421  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  420 tcacaagaggtatc 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 9111 - 9224
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| ||||| || |||| ||||||||||| ||| |||| ||||||||||| | ||||||| | || |||||| ||| |||||||||||||||||||     
T  9111 gaaaatttacctaatgcaaacaactctggataagacaccagcatcttactctctagctcccacgttaagctttcatcagtcgctccttcccaaacgactc 9210  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  9211 tcacaagaggtatc 9224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 6041 - 6154
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  | || ||||||||||| |||| ||| ||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||||||     
T  6041 gaaaatttacctcaagcgaacaactctggataagacttcagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactc 6140  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  6141 tcacaagaggtatc 6154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 15261 - 15374
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || ||||| | || ||||||||||||||||||||    
T  15261 gaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagctcccacgttaagctttcgctagtcgctccttcccaaacgactt 15360  T
Q  325 tcacaagaggtatc 338  Q
    ||||| ||||||||    
T  15361 tcacaggaggtatc 15374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 338
Target Start/End: Complemental strand, 1352 - 1247
Alignment:
Q  233 acctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaaga 332  Q
    ||||||| |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||||| | |||||||||| |||||||     
T  1352 acctcatgcaaacaactctggataagactccagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgttccaaacgactctcacaagg 1253  T
Q  333 ggtatc 338  Q
    ||||||    
T  1252 ggtatc 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 54; Significance: 6e-22; HSPs: 4)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 32266 - 32153
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||  ||||||||||| | ||||||| |||| |||| ||||| |||||| ||||||||||||     
T  32266 gaaaatttacctcaagcaaacaactctggataagactccatcatcttactctctagctcccacgtcaagcttttaccagtcgctccgtcccaaacgactc 32167  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  32166 tcacaagaggtatc 32153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 35844 - 35935
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    ||||||||||| || ||| | ||||||||||||| ||||||  ||||||||||||||| |||||| |||||||||||| ||||||| |||||    
T  35844 aactctggataagaatcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtat 35935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 19911 - 20002
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||| |||||| || ||| | ||||||||||||| ||||||  ||||||||||||||| |||||| |||||||||||| ||||||| |||||    
T  19911 aactttggataagaatcccgcatcttactctccagctcccaattcaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtat 20002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 43294 - 43385
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    ||||||||||| || ||  | ||||||||||||| |||| |  ||||||||||||||| || ||| |||||||||||| ||||||| |||||    
T  43294 aactctggataagaatctcgcatcttactctccagctcctaagtcaaactttcaccagtcgttccgtcccaaacgactctcacaaggggtat 43385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 42558 - 42663
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||||||| ||||||  ||||||||||||||| |||||| ||||||||||||  ||||||    
T  42558 tacctcaaacaaacaactccggatacgactcctgcatcttactctccagctcccaagtcaaactttcaccagtcgctccatcccaaacgactcacacaag 42657  T
Q  332 aggtat 337  Q
    ||||||    
T  42658 aggtat 42663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 64569 - 64456
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| |||||||  ||||||||||| | ||||||| |||| |||||||||  |||||  ||||||||||||     
T  64569 gaaaatttacctcatgcaaacaactctggataagactccaccatcttactctcaagctcccacgtcaagctttcaccattcgctctgtcccaaacgactc 64470  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  64469 tcacaagaggtatc 64456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 6e-22; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 2665 - 2552
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    ||||||| ||||||| ||||  |||||||||| ||||| || |||||||| |||| ||||||| | ||||| ||||||| |||||||||| ||||||| |    
T  2665 gaaaatgcacctcatgcaaacgactctggataagactctagcatcttactttccagctcccacgttaaactctcaccagtcgctccttcctaaacgacct 2566  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  2565 tcacaagaggtatc 2552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 42922 - 43035
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| | ||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  42922 gaaaatttacctcaagcaaacagctctggataggactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 43021  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  43022 tcacgagaggtatc 43035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 62057 - 62170
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| | ||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  62057 gaaaatttacctcaagcaaacagctctggataggactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 62156  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  62157 tcacgagaggtatc 62170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 8253 - 8366
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||||||||||||||| ||||| || ||||||||||| | ||||||| |||| || ||||||| || |||   |||||||| |     
T  8253 gaaaatttacctcaagcaaataactctggataagactctagcatcttactctcaagctcccacgtcaagctctcaccagtcgttcccgtccaaacgaatc 8352  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  8353 tcacgagaggtatc 8366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 51045 - 50939
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| ||| ||||| | |||||||| |||| ||||||  | |||||||| | || ||||||  ||||||||||| |||||||    
T  51045 tacctcaaacaaacaactctgggtacaactcccgcatcttactttccagctcccaagttaaactttctctagtcgctccaccccaaacgactctcacaag 50946  T
Q  332 aggtatc 338  Q
     ||||||    
T  50945 tggtatc 50939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 39407 - 39315
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||| |||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||| ||||||||||||||    
T  39407 aactctggataagactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatc 39315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 774 - 885
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    ||||| |||||||| |||| |||| |||||| || || || ||||||||||| | ||||||| |||| ||| |||||| |||||| ||||||||||||||    
T  774 aaaatttacctcatgcaaacaactgtggataagattctagcatcttactctctagctcccacttcaatcttgcaccagtcgctccatcccaaacgacttt 873  T
Q  326 cacaagaggtat 337  Q
    ||||||||||||    
T  874 cacaagaggtat 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 221 - 115
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| ||||||||||| |||||||  ||||||||||||||||||||| ||||||| |||||||   ||||| ||||||| |||||||| ||    
T  221 tacctcaatcaaacaactctggataagactccaacatcttactctccaactcccacgtcaaactctcaccagtttctcctccccaaacaactttcactag 122  T
Q  332 aggtatc 338  Q
    || ||||    
T  121 agatatc 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 30686 - 30792
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||| |||||| ||||||||||| |||||||| ||||||||||| | ||||||| | || |||||||||| |||||| ||| |||||||| |||| ||    
T  30686 tacctcgttcaaacaactctggataagactccagcatcttactctctagctcccacgttaagctttcaccagtcgctccgtccgaaacgactctcacgag 30785  T
Q  332 aggtatc 338  Q
    |||||||    
T  30786 aggtatc 30792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 16451 - 16557
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| |||| ||||||||||||| | ||||||||||||| ||||||  | |||||||| |||| ||||||  ||||||||||| |||||||    
T  16451 tacctcaatcaaacaactttggatacgactcccgcatcttactctccagctcccaagtaaaactttctccagtcgctccaccccaaacgactctcacaag 16550  T
Q  332 aggtatc 338  Q
    |||||||    
T  16551 aggtatc 16557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 26396 - 26342
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactccca 286  Q
    |||||||  |||| |||||||||||||||||| | ||||||||||||| ||||||    
T  26396 tacctcaaacaaacaactctggatacgactcccgcatcttactctccagctccca 26342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 248396 - 248494
Alignment:
Q  240 tcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||| ||||| || ||||||||| | ||||||||||||| ||||||  |||||||||||| || |||||| |||||||||||| ||||||||||||||    
T  248396 tcaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaactttcactagtcgctccatcccaaacgactctcacaagaggtatc 248494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 907 - 1020
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || |||| ||||| |||||| || |||||||||     
T  907 gaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagctcccacgttaagcttttaccagtcgctccgtctcaaacgactc 1006  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  1007 tcacaagaggtatc 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 5782 - 5895
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||| | ||| |||||| |||| |||||||     
T  5782 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagcttttaacagtcgctccgtccccaacgactc 5881  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  5882 tcacaagaggtatc 5895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 6761 - 6858
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||| ||||||||||| |||||||| ||||||||||| | ||| ||| | ||||||||||||||| |||| ||| |||| ||||||||||||||||||    
T  6761 caaacaactctggataagactccagcatcttactctctagctctcacgttaaactttcaccagccactccgtcctaaacaactttcacaagaggtatc 6858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 4989 - 5102
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| | |||||||   || |||||||||| |||||| ||||| ||||||     
T  4989 gaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagctcccacggtaagctttcaccagtcgctccgtcccacacgacta 5088  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  5089 tcacaagaggtatc 5102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 14128 - 14241
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||  |||||||||||     
T  14128 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccagcccaaacgactc 14227  T
Q  325 tcacaagaggtatc 338  Q
    | ||||| ||||||    
T  14228 taacaaggggtatc 14241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 388 - 501
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||| ||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  388 gaaaatttacctcaagcaaacaactctggataagactccagcatcttacgctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 487  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  488 tcacgagaggtatc 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 338
Target Start/End: Complemental strand, 1230 - 1118
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    ||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | || |||  |||| |||||||||| |||||| |||||||||||| |    
T  1230 aaaatttacctcaagcaaacaactctggataagactccagcatcttactctctagcttccatgtcaagctttcaccagtcgctccgtcccaaacgactct 1131  T
Q  326 cacaagaggtatc 338  Q
    ||| |||||||||    
T  1130 caccagaggtatc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 338
Target Start/End: Complemental strand, 37283 - 37171
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgacttt 325  Q
    ||||| |||||||  |||| ||||||||||| |||||||  ||||||||||| | | ||||| |||| ||||||| || |||||| |||||||||||| |    
T  37283 aaaatttacctcaagcaaacaactctggataagactccaacatcttactctcaagcccccacgtcaagctttcactagtcgctccgtcccaaacgactct 37184  T
Q  326 cacaagaggtatc 338  Q
    |||||||||||||    
T  37183 cacaagaggtatc 37171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 19269 - 19164
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| || ||| | ||||||||||||| |||| |  |||||||||||| || |||||| |||||||||||| ||| |||    
T  19269 tacctcaaacaaacaactctggataagaatcccgcatcttactctccagctcctaagtcaaactttcacaagtcgctccgtcccaaacgactctcaaaag 19170  T
Q  332 aggtat 337  Q
     |||||    
T  19169 gggtat 19164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 2367 - 2473
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  ||||| ||||||||| ||||||  ||||||||||| |||||||    
T  2367 tacctcaagcaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaaatttcaccagtcgctccaccccaaacgactctcacaag 2466  T
Q  332 aggtatc 338  Q
    |||||||    
T  2467 aggtatc 2473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 10699 - 10809
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| |||| || ||| || ||||| ||||||||||| | ||||||| | || |||||||||| |||||||||||||||||||     
T  10699 gaaaatttacctcaagcaaacaactttgtataagattccagcatcttactctctagctcccacgttaagctttcaccagtcgctccttcccaaacgactc 10798  T
Q  325 tcacaagaggt 335  Q
    |||||||||||    
T  10799 tcacaagaggt 10809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 26036 - 26142
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||| | |||||||    
T  26036 tacctcaaacaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgaatctcacaag 26135  T
Q  332 aggtatc 338  Q
    |||||||    
T  26136 aggtatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 321
Target Start/End: Original strand, 36704 - 36793
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacga 321  Q
    |||||||  |||| ||||| || ||||||||| | ||||||||||||| ||||||  ||||||||||||||| ||||||  |||||||||    
T  36704 tacctcaaacaaacaactccgggtacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacga 36793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 2955 - 3021
Alignment:
Q  272 actctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||||||||||| | || |||||||||| |||||||||||||| |||||||||||||||||||    
T  2955 actctccaactcccacgttaagctttcaccagtcgctccttcccaaatgactttcacaagaggtatc 3021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 444 - 557
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| | ||||||||| || ||||| ||||||||||| | ||||||| | |  |||||||||| ||||| |||||||||||||     
T  444 gaaaatttacctcaagcaaacatctctggataagattccagcatcttactctctagctcccacgttaggctttcaccagtcgctcattcccaaacgactc 543  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  544 tcacaagaggtatc 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 7145 - 7258
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||| ||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  7145 gaaaatttacctcaagcaaacaactctggataagactccagcatcctactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactc 7244  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  7245 tcacgagaggtatc 7258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 16725 - 16838
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| || ||| | ||||||||||| | ||||||| | || |||||||||  |||||| ||||||||||||     
T  16725 gaaaatttacctcaagcaaacaactctggataagattcctgcatcttactctctagctcccacgttaagctttcaccaatcgctccgtcccaaacgactc 16824  T
Q  325 tcacaagaggtatc 338  Q
    ||||||||||||||    
T  16825 tcacaagaggtatc 16838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 344
Target Start/End: Complemental strand, 330 - 262
Alignment:
Q  276 tccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatccgcttt 344  Q
    |||||||||||| | || |||||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  330 tccaactcccacgttaagctttcaccagtcgctccttcccaaacgactttcacaagatgtatccacttt 262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 4943 - 4831
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||  ||||||| |||     
T  4943 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccagcccaaacaactc 4844  T
Q  325 tcacaagaggtat 337  Q
    | ||||| |||||    
T  4843 taacaaggggtat 4831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 10634 - 10718
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatccgctttcccctca 351  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| ||||||| |||| ||||||| |||||   |||||||||||    
T  10634 atcttactctccaactcccaagtcaaactttcaccagtcgctccgtcccaaaagactctcacaaggggtatttcctttcccctca 10718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 8364 - 8476
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||  ||||||| |||     
T  8364 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccagcccaaacaactc 8463  T
Q  325 tcacaagaggtat 337  Q
    | ||||| |||||    
T  8464 taacaaggggtat 8476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 34111 - 33998
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| | || |||||||||| |||||   |||||||||||     
T  34111 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgttaagctttcaccagtcgctctagcccaaacgacta 34012  T
Q  325 tcacaagaggtatc 338  Q
    | ||||| ||||||    
T  34011 taacaaggggtatc 33998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 328
Target Start/End: Original strand, 11685 - 11788
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| ||||||   ||||||||||     
T  11685 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgaccaaacgactc 11784  T
Q  325 tcac 328  Q
    ||||    
T  11785 tcac 11788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 29280 - 29194
Alignment:
Q  252 ggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||| |||||||| ||||||||||||| ||||||   ||||||||||||||  |||||| ||||||| |||||||| |||||||||    
T  29280 ggataagactccagcatcttactctccagctcccatgccaaactttcaccagttgctcctccccaaacaactttcactagaggtatc 29194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 41271 - 41185
Alignment:
Q  252 ggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||| |||||||| ||||||||||||| ||||||   ||||||||||||||  |||||| ||||||| |||||||| |||||||||    
T  41271 ggataagactccagcatcttactctccagctcccatgccaaactttcaccagttgctcctccccaaacaactttcactagaggtatc 41185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 63437 - 63385
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctc 277  Q
    |||||| |||||||| |||| ||||||||||| |||||||| |||||||||||    
T  63437 gaaaatttacctcatgcaaacaactctggataagactccagcatcttactctc 63385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 6706 - 6819
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactt 324  Q
    |||||| |||||||  | || ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||||| |||| |   ||||||||||     
T  6706 gaaaatttacctcaagcgaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgcttccgtccaaacgactc 6805  T
Q  325 tcacaagaggtatc 338  Q
    |||| |||||||||    
T  6806 tcacgagaggtatc 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 5533 - 5428
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| | |||| | ||||||||||||| ||||||  |||||||||||||||   ||||| ||||||| |||||||| ||    
T  5533 tacctcaagcaaacaactctggatatgtctcccgcatcttactctccagctcccaagtcaaactttcaccagttactcctccccaaacaactttcactag 5434  T
Q  332 aggtat 337  Q
    ||||||    
T  5433 aggtat 5428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 36977 - 37082
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||| | ||||||||||||| ||||||  |||||||||||||||   ||||| ||||||| || ||||| ||    
T  36977 tacctcaagcaaacaactctggataagactcccgcatcttactctccagctcccatgtcaaactttcaccagttactcctccccaaacaaccttcactag 37076  T
Q  332 aggtat 337  Q
    ||||||    
T  37077 aggtat 37082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 26683 - 26723
Alignment:
Q  298 caccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||| |||||| |||||||||||| ||||||||||||||    
T  26683 caccagtcgctccgtcccaaacgactctcacaagaggtatc 26723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 203 - 295
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    ||||||||||| |||||||| ||||||||| | | |||| || |||| |||||||||| |||||||  |||||||||| |||| |||||||||    
T  203 aactctggataagactccagcatcttactcccaagctcctacgtcaagctttcaccagtcgctcctaaccaaacgactctcacgagaggtatc 295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 11270 - 11164
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||||| ||||||||||||| ||||||  |||||| ||||| ||  |||||| ||||||| ||||| || ||    
T  11270 tacctcaagcaaacaactctggataagactccagcatcttactctccagctcccatgtcaaacattcactagatgctcctccccaaacaacttttactag 11171  T
Q  332 aggtatc 338  Q
    || ||||    
T  11170 agatatc 11164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 303 - 409
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||||||||| |||||| | |||||||| |||| ||||||  | |||||||||| || ||||||   |||||||||| |||||||    
T  303 tacctcaagcaaacaactctggataagactcccgcatcttactttccagctcccaagttaaactttcactagtcgctccactccaaacgactctcacaag 402  T
Q  332 aggtatc 338  Q
    |||||||    
T  403 aggtatc 409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 34208 - 34102
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| |||||||| ||||||||| | |||||||| |||| ||||||  | |||||||| |||| ||||||  ||||||||||| |||||||    
T  34208 tacctcaaacaaacaactctgggtacgactcccgcatcttactttccagctcccaagttaaactttctccagtcgctccaccccaaacgactctcacaag 34109  T
Q  332 aggtatc 338  Q
     ||||||    
T  34108 cggtatc 34102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 3666 - 3735
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    ||||||| ||||| ||||||||||| |||||| | ||||||||||||| ||||||  |||||||||||||    
T  3666 tacctcaatcaaacaactctggataagactcctgcatcttactctccagctcccaagtcaaactttcacc 3735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 1184 - 1289
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| |||||| ||||| ||||||||| ||||||  |||||||||||||||   ||||| ||||||| || ||||| ||    
T  1184 tacctcaagcaaacaactccggataagactcccgtatcctactctccagctcccaagtcaaactttcaccagttactcctccccaaacaaccttcactag 1283  T
Q  332 aggtat 337  Q
    ||||||    
T  1284 aggtat 1289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 351
Target Start/End: Original strand, 15755 - 15860
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatccgctttc 345  Q
    ||||||||||| || ||| || |||||||||||| ||||||  |||||||||||| || |||||| |  ||||||||| ||||||| ||||||  ||| |    
T  15755 aactctggataagaatcccgtttcttactctccagctcccaagtcaaactttcactagtcgctccgttgcaaacgactctcacaaggggtatctccttgc 15854  T
Q  346 ccctca 351  Q
    ||||||    
T  15855 ccctca 15860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 45619 - 45688
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||  ||||||| |||||    
T  45619 tacctcaatcaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaactctcacc 45688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 930 - 825
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| ||||||||||| |||||| | ||||||||||||| ||||||  ||||||| |||||||   ||||  ||||||| || ||||| ||    
T  930 tacctcaatcaaacaactctggataagactcccgcatcttactctccagctcccaagtcaaactctcaccagttactccaccccaaacaaccttcactag 831  T
Q  332 aggtat 337  Q
    ||||||    
T  830 aggtat 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 10663 - 10732
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    ||||||| ||||| |||||||||||||||||  | ||||||||||||| ||||||  ||||||| |||||    
T  10663 tacctcaatcaaacaactctggatacgactctcgcatcttactctccagctcccaagtcaaactctcacc 10732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 5449 - 5380
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||  ||||||| |||||    
T  5449 tacctcaatcaaacaactctggatacgactcctgcatcttactctccagctcccaagtcaaactctcacc 5380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 14437 - 14332
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| ||||||||||| || ||| | ||||||||||||| ||||||  ||||||| | |||||   ||||| ||||||| || ||||| ||    
T  14437 tacctcaatcaaacaactctggataagaatcccgcatcttactctccagctcccaagtcaaactctaaccagttactcctccccaaacaaccttcactag 14338  T
Q  332 aggtat 337  Q
    ||||||    
T  14337 aggtat 14332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 2962 - 2894
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcac 300  Q
    |||||||  |||| |||||||||||||||||| | ||||||||||||| ||||||  ||||||||||||    
T  2962 tacctcaaacaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaactttcac 2894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 337
Target Start/End: Complemental strand, 6421 - 6325
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||| ||||||||||| ||||| || ||||||||||||| ||||||  ||||||||||||| |   ||||| ||||||| || ||||| ||||||||    
T  6421 caaacaactctggataagactcaagcatcttactctccagctcccaagtcaaactttcacccgttactcctccccaaacaaccttcactagaggtat 6325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 8668 - 8736
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcac 300  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||  | ||||||||||    
T  8668 tacctcaatcaaacaactctggatacgactcccgcatcttactctccagctcccaagttaaactttcac 8736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 196215 - 196144
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccag 303  Q
    ||||||| ||||| |||||||||||||| ||| | ||||||||||||| ||||||  ||||||| |||||||    
T  196215 tacctcaatcaaacaactctggatacgaatcccgcatcttactctccagctcccaagtcaaactctcaccag 196144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 148370 - 148424
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactccca 286  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||    
T  148370 tacctcaatcaaacaactctggatacgactcccgcatcttactctccagctccca 148424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 36883 - 36831
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctc 277  Q
    |||||| |||||||  |||| ||||||||||| |||||||| |||||||||||    
T  36883 gaaaatttacctcaagcaaacaactctggataagactccagcatcttactctc 36831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 10614 - 10508
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||| ||  | |||||||| |||| ||||||  ||||||||||||||| || |||  ||||||| ||| |||||||    
T  10614 tacctcaaacaaacaactcaggatacgattcttgcatcttactttccagctcccatgtcaaactttcaccagtcgatccaccccaaacaactctcacaag 10515  T
Q  332 aggtatc 338  Q
    |||||||    
T  10514 aggtatc 10508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 6184 - 6258
Alignment:
Q  226 aaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcac 300  Q
    ||||| |||||||  |||| ||||||||||| |||||||| ||||||||||| | ||||||| |||| |||||||    
T  6184 aaaatttacctcaagcaaacaactctggataagactccagcatcttactctctagctcccacgtcaagctttcac 6258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 7567 - 7498
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||||||||| |||||||  ||||||||||||| ||||||  |||||||||||||    
T  7567 tacctcaagcaaacaactctggataagactccaacatcttactctccagctcccatgtcaaactttcacc 7498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 4670 - 4565
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    ||||||| ||||| ||||||||||| || ||| | ||||||||||||| ||||||  ||||||| |||||||   | ||| ||||||| || ||||| ||    
T  4670 tacctcaatcaaacaactctggataagaatcccgcatcttactctccagctcccaagtcaaactctcaccagttacacctccccaaacaaccttcactag 4571  T
Q  332 aggtat 337  Q
    ||||||    
T  4570 aggtat 4565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 19758 - 19827
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    ||||||| ||||| |||||||||||||||||  | ||||||||||||| ||||||  ||||||| |||||    
T  19758 tacctcaatcaaacaactctggatacgactctcgcatcttactctccagctcccaagtcaaactctcacc 19827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 13312 - 13207
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| || ||| | |||||||| |||| ||| ||  |||| |||||||||| |||||| |||||||||||| |||||||    
T  13312 tacctcaaacaaacaactcaggatatgaatcccgcatcttactttccagctcgcaagtcaagctttcaccagtcgctccgtcccaaacgactctcacaag 13213  T
Q  332 aggtat 337  Q
     |||||    
T  13212 gggtat 13207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 22207 - 22138
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||||||||| |||||||||||| | ||||||||||||| ||||||  ||||||| |||||    
T  22207 tacctcaagcaaataactccggatacgactcccgcatcttactctccagctcccaagtcaaactctcacc 22138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 27001 - 27070
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||||||||| |||||| | ||||||||||||| ||||||  |||||||||||||    
T  27001 tacctcaaacaaacaactctggataagactcccgcatcttactctccagctcccaagtcaaactttcacc 27070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 12833 - 12764
Alignment:
Q  241 caaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctcc 310  Q
    |||| ||||||||||| |||||||  ||||||||||| | ||||||| |||| |||||||||| ||||||    
T  12833 caaacaactctggataagactccaacatcttactctctagctcccacgtcaagctttcaccagtcgctcc 12764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 1 - 72
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||| |||| ||||||  ||||||||||||||| ||||||  ||||||| ||| | ||||||||||||    
T  1 atcttactttccagctcccaagtcaaactttcaccagtcgctccaccccaaacaactcttacaagaggtatc 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 3785 - 3730
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||| ||||||||||||| | ||||||||||||| ||||||  |||||||||||||    
T  3785 aactatggatacgactcccgcatcttactctccagctcccaagtcaaactttcacc 3730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 14768 - 14713
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||||||||||||| | ||||||||||||| ||||||  ||||||| |||||    
T  14768 aactctggatacgactcccgcatcttactctccagctcccaagtcaaactctcacc 14713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 9394 - 9354
Alignment:
Q  246 aactctggatacgactccagtatcttactctccaactccca 286  Q
    |||||||||||||||||| | ||||||||||||| ||||||    
T  9394 aactctggatacgactcccgcatcttactctccagctccca 9354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 17817 - 17762
Alignment:
Q  281 ctcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggta 336  Q
    ||||||| |||| |||||||||| |||||| |||||||||||| |||| |||||||    
T  17817 ctcccacgtcaagctttcaccagtcgctccctcccaaacgactctcacgagaggta 17762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 13720 - 13649
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccag 303  Q
    |||||||  |||| ||||||||||| |||||| | ||||||||||||| ||||||  | |||||||||||||    
T  13720 tacctcaagcaaacaactctggataagactcccgcatcttactctccagctcccaagttaaactttcaccag 13649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 112357 - 112440
Alignment:
Q  255 tacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatc 338  Q
    |||||||| || ||||||||||||||||||||  | | |||||||||||  |||||  ||||||| ||| | ||||||||||||    
T  112357 tacgactctagcatcttactctccaactcccaagttagactttcaccagttgctccaccccaaacaactcttacaagaggtatc 112440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1550 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1550
Description:

Target: scaffold1550; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 80 - 2
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccag 303  Q
    |||||| |||||||  |||| ||||||||||| || ||||| ||||||||||| | ||||||| | || ||||||||||    
T  80 gaaaatttacctcaagcaaacaactctggataagattccagcatcttactctctagctcccacgttaagctttcaccag 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 337
Target Start/End: Complemental strand, 49703 - 49633
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaagaggtat 337  Q
    |||||||| |||| ||||||  |||| ||||||| || |||||| |||||||||||| ||||||| |||||    
T  49703 atcttactttccagctcccaagtcaagctttcactagtcgctccgtcccaaacgactctcacaaggggtat 49633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 2396 - 2327
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||| ||||| |||||| | ||||||||||||| ||||||  |||||||||||||    
T  2396 tacctcaagcaaacaactcaggataagactcctgcatcttactctccagctcccaagtcaaactttcacc 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 3758 - 3689
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| |||||||||||||||||| | ||||||||||||| |||| |  ||||||| |||||    
T  3758 tacctcaaacaaacaactctggatacgactcccgcatcttactctccagctcctaagtcaaactctcacc 3689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 9573 - 9642
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||| ||||| |||||| | ||||||||||||| ||||||  |||||||||||||    
T  9573 tacctcaagcaaacaactccggataagactcccgcatcttactctccagctcccaagtcaaactttcacc 9642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 4625 - 4694
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||||||||| |||||  | ||||||||||||| ||||||  |||||||||||||    
T  4625 tacctcaaacaaacaactctggataagactctcgcatcttactctccagctcccaagtcaaactttcacc 4694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 1198 - 1267
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||| ||||| |||||| | ||||||||||||| ||||||  |||||||||||||    
T  1198 tacctcaagcaaacaactccggataagactcccgcatcttactctccagctcccaagtcaaactttcacc 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 49563 - 49459
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| ||||| |||||  | ||||||||||||| ||||||  |||||||||||||||   ||||| ||||||| || ||||| ||    
T  49563 tacctcaagcaaacaactcaggataagactctcgcatcttactctccagctcccaactcaaactttcaccagttactcctccccaaac-accttcactag 49465  T
Q  332 aggtat 337  Q
    ||||||    
T  49464 aggtat 49459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 52394 - 52325
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcacc 301  Q
    |||||||  |||| ||||| ||||| |||||| | ||||||||||||| ||||||  |||||||||||||    
T  52394 tacctcaagcaaacaactcaggataagactcctgcatcttactctccagctcccaagtcaaactttcacc 52325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 96177 - 96238
Alignment:
Q  267 atcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcac 328  Q
    |||||||| |||| ||||||  ||||||||||||||| ||||||  ||||||||||| ||||    
T  96177 atcttactttccagctcccaagtcaaactttcaccagtcgctccgccccaaacgactctcac 96238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 135894 - 135999
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||||| | | ||||| ||||||| ||||||  |||||||||||||||   ||||  ||||||| || ||||| ||    
T  135894 tacctcaagcaaacaactccggatacgactgccgcatcttgctctccagctcccaagtcaaactttcaccagttactccaccccaaacaaccttcactag 135993  T
Q  332 aggtat 337  Q
    ||||||    
T  135994 aggtat 135999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 257
Target Start/End: Original strand, 29125 - 29157
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatac 257  Q
    |||||||||||||||| ||||||||||||||||    
T  29125 gaaaatgtacctcattaaaataactctggatac 29157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 7741 - 7689
Alignment:
Q  225 gaaaatgtacctcattcaaataactctggatacgactccagtatcttactctc 277  Q
    |||||| ||| |||| |||| ||||||||||| |||||||| |||||||||||    
T  7741 gaaaatttacttcatgcaaacaactctggataagactccagcatcttactctc 7689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 194668 - 194768
Alignment:
Q  232 tacctcattcaaataactctggatacgactccagtatcttactctccaactcccacatcaaactttcaccagccgctccttcccaaacgactttcacaag 331  Q
    |||||||  |||| ||||| |||||||| ||  | |||||||| |||| ||||||  ||||||||||||||| ||||||  ||||||| ||| | |||||    
T  194668 tacctcaaacaaacaactcaggatacgattcttgcatcttactttccagctcccaagtcaaactttcaccagtcgctccaccccaaacaactcttacaag 194767  T
Q  332 a 332  Q
    |    
T  194768 a 194768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University