View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12994_low_9 (Length: 379)

Name: NF12994_low_9
Description: NF12994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12994_low_9
NF12994_low_9
[»] chr1 (55 HSPs)
chr1 (1-146)||(50183067-50183205)
chr1 (317-371)||(17518599-17518653)
chr1 (315-371)||(13589656-13589712)
chr1 (315-371)||(47955306-47955363)
chr1 (315-368)||(6002237-6002291)
chr1 (315-368)||(8108993-8109047)
chr1 (315-369)||(20371352-20371406)
chr1 (315-368)||(48190771-48190825)
chr1 (315-368)||(49284409-49284463)
chr1 (315-368)||(27172116-27172169)
chr1 (315-367)||(20480613-20480665)
chr1 (315-371)||(41083208-41083264)
chr1 (315-368)||(48191355-48191409)
chr1 (233-300)||(50183293-50183360)
chr1 (315-368)||(20480168-20480221)
chr1 (315-371)||(41082909-41082966)
chr1 (315-368)||(50615621-50615674)
chr1 (315-368)||(50623449-50623502)
chr1 (315-371)||(17518303-17518359)
chr1 (315-371)||(22149403-22149458)
chr1 (318-371)||(1176839-1176893)
chr1 (315-368)||(9347126-9347180)
chr1 (315-368)||(32163043-32163097)
chr1 (315-368)||(39692000-39692054)
chr1 (315-368)||(44911025-44911079)
chr1 (315-368)||(48105116-48105170)
chr1 (315-364)||(999529-999578)
chr1 (315-364)||(1176717-1176766)
chr1 (318-370)||(8108724-8108777)
chr1 (315-368)||(9347551-9347604)
chr1 (318-366)||(22149701-22149750)
chr1 (315-371)||(31848189-31848246)
chr1 (315-371)||(47955605-47955662)
chr1 (315-364)||(49317752-49317801)
chr1 (315-364)||(49318170-49318219)
chr1 (315-363)||(19007735-19007783)
chr1 (316-368)||(47498495-47498547)
chr1 (317-368)||(50526472-50526524)
chr1 (316-366)||(13918869-13918920)
chr1 (315-362)||(21687473-21687520)
chr1 (318-368)||(50430081-50430132)
chr1 (318-364)||(999115-999161)
chr1 (315-368)||(4692433-4692487)
chr1 (315-368)||(6703894-6703948)
chr1 (315-368)||(13918446-13918500)
chr1 (315-368)||(21687025-21687079)
chr1 (315-368)||(26814694-26814748)
chr1 (315-368)||(28633720-28633774)
chr1 (315-368)||(33085671-33085725)
chr1 (316-366)||(46056904-46056953)
chr1 (318-370)||(1177016-1177069)
chr1 (315-367)||(39690794-39690847)
chr1 (318-366)||(42611188-42611237)
chr1 (317-368)||(6002894-6002946)
chr1 (318-365)||(46823846-46823894)
[»] scaffold0110 (2 HSPs)
scaffold0110 (315-371)||(45804-45860)
scaffold0110 (315-371)||(45537-45593)
[»] scaffold0319 (2 HSPs)
scaffold0319 (315-371)||(6694-6750)
scaffold0319 (315-371)||(6394-6451)
[»] chr5 (42 HSPs)
chr5 (315-370)||(25115757-25115813)
chr5 (315-370)||(25174849-25174905)
chr5 (315-368)||(34577164-34577217)
chr5 (315-368)||(37610202-37610255)
chr5 (315-368)||(37780320-37780373)
chr5 (315-368)||(18817611-18817665)
chr5 (315-368)||(22428934-22428987)
chr5 (315-368)||(22429196-22429249)
chr5 (315-371)||(33324835-33324892)
chr5 (316-368)||(22729440-22729492)
chr5 (318-366)||(31569910-31569958)
chr5 (315-368)||(18433015-18433069)
chr5 (315-368)||(18816952-18817006)
chr5 (315-368)||(26020450-26020504)
chr5 (315-371)||(18433313-18433370)
chr5 (315-371)||(25175148-25175205)
chr5 (315-368)||(41383167-41383220)
chr5 (315-367)||(23011079-23011131)
chr5 (318-368)||(11351427-11351478)
chr5 (321-371)||(16726084-16726135)
chr5 (315-369)||(25116060-25116115)
chr5 (315-366)||(43464194-43464245)
chr5 (315-368)||(12498567-12498621)
chr5 (315-368)||(12498928-12498982)
chr5 (315-368)||(26571164-26571218)
chr5 (318-368)||(34576870-34576920)
chr5 (318-368)||(43463759-43463809)
chr5 (315-367)||(9665828-9665879)
chr5 (318-368)||(21207229-21207280)
chr5 (318-368)||(9665560-9665609)
chr5 (318-368)||(10098941-10098991)
chr5 (315-368)||(11350808-11350861)
chr5 (315-364)||(16466746-16466796)
chr5 (315-368)||(19514963-19515017)
chr5 (315-365)||(22729008-22729058)
chr5 (315-360)||(12441320-12441364)
chr5 (318-367)||(23011383-23011432)
chr5 (318-367)||(41382896-41382945)
chr5 (317-361)||(2817582-2817626)
chr5 (315-370)||(5187828-5187884)
chr5 (315-368)||(19514525-19514580)
chr5 (315-366)||(34147512-34147564)
[»] chr4 (55 HSPs)
chr4 (315-371)||(3930477-3930533)
chr4 (315-368)||(11241661-11241714)
chr4 (316-371)||(22681576-22681631)
chr4 (315-368)||(43051252-43051306)
chr4 (315-368)||(50678779-50678833)
chr4 (315-368)||(56505693-56505747)
chr4 (316-368)||(11529169-11529222)
chr4 (319-371)||(49178813-49178866)
chr4 (315-371)||(35393773-35393829)
chr4 (318-368)||(36096475-36096526)
chr4 (315-368)||(16555817-16555871)
chr4 (315-368)||(24775783-24775837)
chr4 (315-368)||(36095817-36095871)
chr4 (315-368)||(50679424-50679478)
chr4 (316-371)||(8181992-8182049)
chr4 (315-371)||(13198903-13198960)
chr4 (315-371)||(16555515-16555572)
chr4 (315-371)||(18077199-18077256)
chr4 (315-368)||(26207361-26207414)
chr4 (315-367)||(54508815-54508868)
chr4 (316-371)||(8488479-8488534)
chr4 (315-368)||(4239366-4239420)
chr4 (315-365)||(7603422-7603472)
chr4 (315-368)||(9023244-9023298)
chr4 (318-371)||(13198606-13198660)
chr4 (315-368)||(28196346-28196400)
chr4 (315-368)||(28196773-28196827)
chr4 (315-368)||(32703650-32703704)
chr4 (315-368)||(23539841-23539893)
chr4 (316-368)||(25161879-25161932)
chr4 (315-368)||(48405962-48406015)
chr4 (315-368)||(169013-169068)
chr4 (315-371)||(3930179-3930235)
chr4 (315-371)||(27304718-27304773)
chr4 (315-365)||(9380744-9380795)
chr4 (318-368)||(43050610-43050661)
chr4 (315-368)||(293217-293271)
chr4 (315-368)||(9023680-9023734)
chr4 (315-368)||(9380307-9380361)
chr4 (315-368)||(26207746-26207800)
chr4 (315-368)||(32703225-32703279)
chr4 (315-368)||(39744465-39744519)
chr4 (315-368)||(45830196-45830250)
chr4 (320-368)||(49178644-49178694)
chr4 (315-371)||(11241389-11241446)
chr4 (315-367)||(23540253-23540306)
chr4 (315-367)||(25225399-25225452)
chr4 (320-371)||(27304890-27304943)
chr4 (318-367)||(48406386-48406435)
chr4 (315-369)||(8182171-8182227)
chr4 (315-366)||(22681881-22681933)
chr4 (329-365)||(25162316-25162352)
chr4 (324-364)||(35393489-35393529)
chr4 (315-366)||(39086625-39086677)
chr4 (315-354)||(56506588-56506628)
[»] chr3 (43 HSPs)
chr3 (315-369)||(47871121-47871175)
chr3 (315-368)||(20969019-20969073)
chr3 (315-364)||(42627550-42627599)
chr3 (315-368)||(42672978-42673031)
chr3 (315-368)||(3353128-3353181)
chr3 (315-371)||(10293906-10293963)
chr3 (315-371)||(18875188-18875245)
chr3 (315-368)||(24485460-24485513)
chr3 (315-368)||(40848521-40848574)
chr3 (315-368)||(42673296-42673349)
chr3 (315-367)||(8315083-8315135)
chr3 (315-370)||(17372298-17372354)
chr3 (315-368)||(21895657-21895712)
chr3 (318-371)||(1101087-1101141)
chr3 (318-368)||(1928434-1928484)
chr3 (318-368)||(14015964-14016014)
chr3 (315-368)||(40848961-40849015)
chr3 (315-368)||(48159897-48159951)
chr3 (315-367)||(1927772-1927825)
chr3 (315-367)||(8314013-8314066)
chr3 (315-368)||(9027033-9027086)
chr3 (315-371)||(10293608-10293665)
chr3 (315-367)||(18874882-18874935)
chr3 (315-371)||(20968718-20968775)
chr3 (315-368)||(21896511-21896564)
chr3 (318-371)||(26540694-26540747)
chr3 (315-367)||(45060872-45060925)
chr3 (322-366)||(3353553-3353597)
chr3 (316-367)||(22429159-22429211)
chr3 (315-369)||(13657445-13657500)
chr3 (318-368)||(27238900-27238951)
chr3 (315-368)||(47666335-47666389)
chr3 (315-368)||(47870823-47870877)
chr3 (315-368)||(48160333-48160387)
chr3 (315-368)||(53687888-53687942)
chr3 (315-365)||(53688306-53688356)
chr3 (318-371)||(14015867-14015923)
chr3 (315-368)||(26007182-26007235)
chr3 (315-367)||(27238465-27238518)
chr3 (318-368)||(13657621-13657673)
chr3 (316-368)||(17372594-17372645)
chr3 (315-362)||(45060596-45060644)
chr3 (320-371)||(45060769-45060821)
[»] scaffold1221 (2 HSPs)
scaffold1221 (315-368)||(1511-1564)
scaffold1221 (318-371)||(1781-1834)
[»] scaffold0802 (2 HSPs)
scaffold0802 (315-371)||(1417-1474)
scaffold0802 (315-371)||(1118-1175)
[»] chr8 (50 HSPs)
chr8 (315-368)||(13936723-13936776)
chr8 (315-371)||(41662400-41662457)
chr8 (315-371)||(43246173-43246230)
chr8 (317-371)||(765736-765791)
chr8 (315-368)||(9823361-9823415)
chr8 (315-368)||(39724048-39724102)
chr8 (315-371)||(12281124-12281181)
chr8 (315-371)||(15156182-15156239)
chr8 (315-371)||(16929239-16929296)
chr8 (315-366)||(13026635-13026687)
chr8 (319-371)||(43162536-43162588)
chr8 (318-368)||(13027281-13027332)
chr8 (318-367)||(15042148-15042198)
chr8 (315-368)||(22851390-22851444)
chr8 (315-368)||(24473343-24473397)
chr8 (315-371)||(12281423-12281480)
chr8 (315-371)||(15155883-15155940)
chr8 (315-371)||(16928942-16928999)
chr8 (315-371)||(37752413-37752470)
chr8 (315-371)||(43245871-43245928)
chr8 (322-370)||(7127660-7127708)
chr8 (315-371)||(34313765-34313820)
chr8 (315-371)||(43162234-43162290)
chr8 (317-368)||(74688-74739)
chr8 (315-368)||(9822748-9822802)
chr8 (315-368)||(23123338-23123392)
chr8 (317-371)||(23123514-23123567)
chr8 (315-368)||(37752084-37752138)
chr8 (315-364)||(6092777-6092825)
chr8 (315-368)||(9623882-9623935)
chr8 (318-366)||(22786843-22786892)
chr8 (315-364)||(33747984-33748033)
chr8 (315-371)||(41662107-41662164)
chr8 (317-368)||(15442765-15442817)
chr8 (315-371)||(18020085-18020140)
chr8 (317-368)||(25438794-25438846)
chr8 (315-366)||(41662521-41662573)
chr8 (315-354)||(767720-767759)
chr8 (315-354)||(9465607-9465646)
chr8 (315-364)||(3307338-3307388)
chr8 (318-371)||(3463817-3463871)
chr8 (315-368)||(13937389-13937443)
chr8 (315-368)||(24473768-24473822)
chr8 (318-368)||(25439126-25439176)
chr8 (315-368)||(34498555-34498609)
chr8 (315-368)||(37396708-37396762)
chr8 (315-368)||(37397145-37397199)
chr8 (315-367)||(3463946-3463999)
chr8 (320-371)||(18019915-18019968)
chr8 (334-366)||(22851958-22851990)
[»] chr7 (50 HSPs)
chr7 (315-371)||(3687653-3687710)
chr7 (315-371)||(9412322-9412379)
chr7 (318-371)||(27096339-27096392)
chr7 (318-371)||(27181911-27181964)
chr7 (315-368)||(13772641-13772695)
chr7 (315-368)||(44599489-44599543)
chr7 (315-368)||(44600135-44600189)
chr7 (315-367)||(35079960-35080012)
chr7 (316-371)||(8953886-8953941)
chr7 (315-368)||(13863313-13863367)
chr7 (315-371)||(9412023-9412080)
chr7 (315-368)||(13744233-13744286)
chr7 (315-371)||(13772898-13772955)
chr7 (315-368)||(48359320-48359373)
chr7 (315-367)||(6908213-6908265)
chr7 (315-367)||(23686421-23686473)
chr7 (315-371)||(3687353-3687411)
chr7 (315-366)||(18864404-18864455)
chr7 (318-369)||(42419028-42419079)
chr7 (315-368)||(8643766-8643820)
chr7 (315-368)||(9035293-9035347)
chr7 (315-368)||(10533034-10533088)
chr7 (315-360)||(13863964-13864010)
chr7 (318-368)||(22740591-22740641)
chr7 (315-368)||(37888833-37888887)
chr7 (315-368)||(37889259-37889313)
chr7 (315-368)||(37972396-37972450)
chr7 (315-368)||(3204669-3204721)
chr7 (318-367)||(6908485-6908534)
chr7 (319-371)||(38191387-38191440)
chr7 (315-362)||(23686723-23686771)
chr7 (315-369)||(9034867-9034922)
chr7 (318-368)||(20418891-20418942)
chr7 (315-362)||(27096047-27096094)
chr7 (315-362)||(27182209-27182256)
chr7 (315-368)||(3205093-3205147)
chr7 (315-368)||(5349733-5349784)
chr7 (316-365)||(5735253-5735303)
chr7 (315-368)||(17156967-17157021)
chr7 (315-368)||(20419324-20419378)
chr7 (315-368)||(22740156-22740210)
chr7 (315-364)||(29292922-29292972)
chr7 (317-371)||(33628397-33628451)
chr7 (318-368)||(36527387-36527437)
chr7 (315-368)||(37971960-37972014)
chr7 (315-368)||(46816311-46816365)
chr7 (315-355)||(34235738-34235779)
chr7 (315-366)||(18925062-18925114)
chr7 (316-368)||(18925322-18925373)
chr7 (318-366)||(40017447-40017495)
[»] chr6 (31 HSPs)
chr6 (315-368)||(10039676-10039729)
chr6 (315-371)||(21031979-21032035)
chr6 (315-368)||(33828990-33829044)
chr6 (315-368)||(33829636-33829690)
chr6 (315-371)||(3403986-3404043)
chr6 (318-371)||(3825530-3825583)
chr6 (315-368)||(22684358-22684411)
chr6 (315-368)||(22754657-22754710)
chr6 (315-371)||(13579648-13579704)
chr6 (315-371)||(23250592-23250648)
chr6 (315-368)||(3403717-3403771)
chr6 (315-371)||(11656779-11656836)
chr6 (315-371)||(18241854-18241911)
chr6 (315-364)||(30388062-30388111)
chr6 (328-370)||(30388360-30388402)
chr6 (318-364)||(31598732-31598778)
chr6 (315-369)||(33655114-33655168)
chr6 (334-371)||(18242153-18242190)
chr6 (315-368)||(29074372-29074425)
chr6 (315-368)||(29079136-29079189)
chr6 (315-368)||(29106945-29106998)
chr6 (315-367)||(31598274-31598326)
chr6 (315-371)||(33971994-33972050)
chr6 (315-368)||(7654548-7654602)
chr6 (315-368)||(10087858-10087912)
chr6 (315-368)||(33974299-33974353)
chr6 (320-371)||(2762611-2762664)
chr6 (320-371)||(10039840-10039893)
chr6 (315-363)||(21032285-21032334)
chr6 (320-371)||(12714436-12714488)
chr6 (315-371)||(23250889-23250945)
[»] chr2 (48 HSPs)
chr2 (315-371)||(20347461-20347518)
chr2 (315-371)||(30190923-30190980)
chr2 (318-370)||(32673141-32673193)
chr2 (315-368)||(2639482-2639536)
chr2 (315-368)||(6171456-6171510)
chr2 (315-368)||(18296693-18296747)
chr2 (315-368)||(26841587-26841641)
chr2 (315-371)||(11883623-11883680)
chr2 (315-371)||(11883923-11883980)
chr2 (315-366)||(6171156-6171207)
chr2 (315-368)||(2638820-2638874)
chr2 (317-371)||(18055050-18055103)
chr2 (315-368)||(24832331-24832385)
chr2 (315-368)||(26842238-26842292)
chr2 (318-371)||(40469726-40469780)
chr2 (318-371)||(43495481-43495535)
chr2 (316-368)||(18296077-18296130)
chr2 (315-371)||(26737482-26737537)
chr2 (315-366)||(29230282-29230334)
chr2 (318-368)||(7591204-7591255)
chr2 (315-366)||(40221313-40221364)
chr2 (315-368)||(5378661-5378715)
chr2 (315-368)||(17850978-17851032)
chr2 (315-368)||(26737781-26737835)
chr2 (315-368)||(37720204-37720258)
chr2 (315-368)||(41790912-41790966)
chr2 (318-366)||(29343584-29343633)
chr2 (315-371)||(30191222-30191279)
chr2 (315-371)||(40469427-40469484)
chr2 (315-366)||(6495723-6495775)
chr2 (316-368)||(16911269-16911321)
chr2 (315-371)||(17346032-17346088)
chr2 (316-368)||(18750126-18750178)
chr2 (315-371)||(43495602-43495658)
chr2 (318-368)||(8851151-8851202)
chr2 (318-368)||(26692820-26692871)
chr2 (315-368)||(5379959-5380013)
chr2 (317-366)||(6325349-6325399)
chr2 (315-368)||(7664673-7664727)
chr2 (315-368)||(8851582-8851636)
chr2 (318-371)||(15920781-15920835)
chr2 (315-368)||(16910827-16910881)
chr2 (315-368)||(20347163-20347217)
chr2 (318-368)||(41790494-41790544)
chr2 (315-368)||(7980003-7980056)
chr2 (318-367)||(15921032-15921081)
chr2 (318-371)||(17345736-17345788)
chr2 (315-371)||(43495309-43495366)
[»] scaffold0002 (1 HSPs)
scaffold0002 (315-371)||(411923-411979)
[»] scaffold0069 (1 HSPs)
scaffold0069 (315-369)||(50506-50560)
[»] scaffold0192 (1 HSPs)
scaffold0192 (315-371)||(25366-25423)
[»] scaffold0001 (4 HSPs)
scaffold0001 (315-371)||(438930-438987)
scaffold0001 (318-367)||(183367-183416)
scaffold0001 (315-371)||(439196-439253)
scaffold0001 (315-371)||(183660-183716)
[»] scaffold0376 (2 HSPs)
scaffold0376 (315-371)||(7597-7653)
scaffold0376 (315-368)||(7455-7508)
[»] scaffold0015 (2 HSPs)
scaffold0015 (315-371)||(17153-17209)
scaffold0015 (315-371)||(16853-16908)
[»] scaffold0009 (1 HSPs)
scaffold0009 (315-371)||(205687-205743)
[»] scaffold0328 (2 HSPs)
scaffold0328 (315-368)||(6795-6849)
scaffold0328 (315-368)||(6152-6206)
[»] scaffold0460 (1 HSPs)
scaffold0460 (315-368)||(763-816)
[»] scaffold0598 (2 HSPs)
scaffold0598 (316-367)||(6877-6927)
scaffold0598 (317-366)||(6609-6659)
[»] scaffold0535 (1 HSPs)
scaffold0535 (315-364)||(10012-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (315-368)||(38695-38749)
[»] scaffold0017 (1 HSPs)
scaffold0017 (315-368)||(185274-185328)
[»] scaffold0176 (1 HSPs)
scaffold0176 (315-368)||(19621-19674)
[»] scaffold0029 (1 HSPs)
scaffold0029 (315-369)||(9905-9960)


Alignment Details
Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 50183067 - 50183205
Alignment:
Q  1 tgcttaaacctttgtgcacttcatgtcataattgacgcacaagcctaactataggagtttgaagttaaacaaattagaacaccaagttactcagtgtcaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||    
T  50183067 tgcttaaacttttgtgcacttcatgtcataattgacgcacaagcctaactataggagtttgaagttaaacaaattagaacaccaa-------agtgtcaa 50183159  T
Q  101 tttcatgtggttatgaaccaattaaccattgtaaccattcatctat 146  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  50183160 tttcatgtggttatgaaccaatttaccattgtaaccattcatctat 50183205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 17518653 - 17518599
Alignment:
Q  317 cttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17518653 cttaattgcacttttccccctatcttttgccaattgtgcgattttgcaccccctc 17518599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 13589712 - 13589656
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  13589712 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccccctc 13589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 47955306 - 47955363
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  47955306 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 47955363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 6002237 - 6002291
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcacccc 6002291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 8109047 - 8108993
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  8109047 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 20371406 - 20371352
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccc 369  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  20371406 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccc 20371352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 48190771 - 48190825
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 48190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 49284409 - 49284463
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  49284409 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 49284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 27172116 - 27172169
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  27172116 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 20480665 - 20480613
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  20480665 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 41083264 - 41083208
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||||||  | ||||| ||||||||||||||||    
T  41083264 ggcttaattgcacttttccccctatcttttgttagttgtgcgattttgcaccccctc 41083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 48191409 - 48191355
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  48191409 ggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacccc 48191355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 50183293 - 50183360
Alignment:
Q  233 atcaatcaataaacccatgcatcaccannnnnnnactaaaaataaacaatattcatttgttcatacat 300  Q
    ||||||||||||||||||||||||| |       ||||||||||||||||||||||| ||||||||||    
T  50183293 atcaatcaataaacccatgcatcacgattttttgactaaaaataaacaatattcattcgttcatacat 50183360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 20480168 - 20480221
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  20480168 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 41082909 - 41082966
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctc 41082966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 50615674 - 50615621
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  50615674 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 50623502 - 50623449
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  50623502 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 17518303 - 17518359
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||| ||||||| |||||||||  ||||||| ||||||||||||||||    
T  17518303 ggcttaattgcacctttccccttatcttttgttaattgtgcgattttgcaccccctc 17518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 22149403 - 22149458
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||    
T  22149403 ggcttaattgcacttttccccctatc-tttggtaattgtgcgattttgcaccccctc 22149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 1176839 - 1176893
Alignment:
Q  318 ttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||| |||||||||||||| ||||||||  |||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctc 1176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 9347126 - 9347180
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 32163097 - 32163043
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  32163097 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 39692054 - 39692000
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||    
T  39692054 ggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 44911025 - 44911079
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||    
T  44911025 ggcttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 48105170 - 48105116
Alignment:
Q  315 ggcttaattgcacttttccccct-atcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacccc 48105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 999578 - 999529
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||||||||||||||||   |||||||||||| |||||||||    
T  999578 ggcttaattgcacttttccccctatagattgccaattgtgcgattttgca 999529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 1176717 - 1176766
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||||||| |||||||| |||||| ||||||| |||||||||    
T  1176717 ggcttaattgcactttcccccctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 8108724 - 8108777
Alignment:
Q  318 ttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcaccccct 370  Q
    |||||||||||||||| ||||||||||||  ||||||| |||||||||||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccct 8108777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 9347604 - 9347551
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| ||||||||  |||||||||||||  ||||||||||||    
T  9347604 ggcttaattgcactttcccccctatagtttgccaattgtgcaattttgcacccc 9347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 22149750 - 22149701
Alignment:
Q  318 ttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 31848246 - 31848189
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| |||||||||||||  ||||||  ||||||||||||||||    
T  31848246 ggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctc 31848189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 47955662 - 47955605
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| ||||||||   ||||||| ||||||||||||||||    
T  47955662 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 47955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 49317752 - 49317801
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||||||||||||||||  |||||||||||||  ||||||||    
T  49317752 ggcttaattgcacttttccccctatagtttgccaattgtgcaattttgca 49317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 49318219 - 49318170
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||||||||    
T  49318219 ggcttaattgcactttcccccctatagtttgccaattgtgcgattttgca 49318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 19007735 - 19007783
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgc 363  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  19007735 ggcttaattgcactttcccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 47498547 - 47498495
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||||||  |||| |||||||| | |||||||||||    
T  47498547 gcttaattgcacttttccccctatagtttgtcaattgtgcggttttgcacccc 47498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 50526524 - 50526472
Alignment:
Q  317 cttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 50526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 13918920 - 13918869
Alignment:
Q  316 gcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||| ||||||  ||||||||||||| |||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacc 13918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 21687520 - 21687473
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttg 362  Q
    |||||||| ||||||||||||||||  ||||||||||||| |||||||    
T  21687520 ggcttaatagcacttttccccctataatttgccaattgtgcgattttg 21687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 50430132 - 50430081
Alignment:
Q  318 ttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 999115 - 999161
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    ||||||||||||||||||||||  |||| |||||||| |||||||||    
T  999115 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgca 999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 4692487 - 4692433
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  |||||||||||||  ||||||||||||    
T  4692487 ggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcacccc 4692433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 6703948 - 6703894
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||||||||||||  ||||||||||||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcacccc 6703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 13918446 - 13918500
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| || |||||  ||||||||||||| |||||||||||||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcacccc 13918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 21687025 - 21687079
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  |||| ||||||||| ||||||||||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcacccc 21687079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 26814694 - 26814748
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| ||||||  |||| |||||||| |||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 26814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 28633720 - 28633774
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||  |||||||||||||    
T  28633720 ggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcacccc 28633774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 33085671 - 33085725
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||||    
T  33085671 ggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccc 33085725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||||| ||||||||||||||| |||| || |||||||||||    
T  46056904 gcttaattgcacttt-ccccctatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 1177069 - 1177016
Alignment:
Q  318 ttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcaccccct 370  Q
    |||||||||||||||| |||||||||| || |||||||  ||||||||||||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcaccccct 1177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 39690794 - 39690847
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||| |||||||||| |||||||| ||| |||||||||| ||||||||||||    
T  39690794 ggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 42611188 - 42611237
Alignment:
Q  318 ttaattgcacttttccccct-atcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||||| ||  ||||||||||||| |||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacc 42611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 6002946 - 6002894
Alignment:
Q  317 cttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||  |||||||||||  |||||||| |||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcacccc 6002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 46823846 - 46823894
Alignment:
Q  318 ttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcac 365  Q
    ||||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 45860 - 45804
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45860 ggcttaattgcacttttccccctatcttttgccaattgtgcgattttgcaccccctc 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 45537 - 45593
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  45537 ggcttaattgcacttttccccctatcttttgttaattgtgcgattttgcactccctc 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 6750 - 6694
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  6750 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccccctc 6694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 6394 - 6451
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  6394 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 25115757 - 25115813
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccct 370  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25115757 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccct 25115813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 25174849 - 25174905
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccct 370  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25174849 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccct 25174905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 34577217 - 34577164
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  34577217 ggcttaattgcactttttcccctatcttttgctaattgtgtgattttgcacccc 34577164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 37610202 - 37610255
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37610202 ggcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 37780320 - 37780373
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37780320 ggcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 18817665 - 18817611
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18817611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 22428934 - 22428987
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  22428934 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 22428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 22429249 - 22429196
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  22429249 ggcttaattgcatttttccccctatcttttgctaattgtgcgattttgcacccc 22429196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 33324892 - 33324835
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  33324892 ggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcaccccctc 33324835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 22729492 - 22729440
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  22729492 gcttaattgcacttttccccctataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 31569910 - 31569958
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  31569910 ttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 18433015 - 18433069
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 18433069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 18816952 - 18817006
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  18816952 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 18817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 26020450 - 26020504
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  26020450 ggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcacccc 26020504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 18433370 - 18433313
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||    
T  18433370 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18433313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 25175205 - 25175148
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||    
T  25175205 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 25175148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 41383220 - 41383167
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  41383220 ggcttaattgaacttttccccctattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 23011079 - 23011131
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||| |||||||| |||||||||| ||||||| ||||||||||||    
T  23011079 ggcttaattgcatttttccccttatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 11351478 - 11351427
Alignment:
Q  318 ttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcacccc 11351427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 16726084 - 16726135
Alignment:
Q  321 attgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacctcctc 16726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 25116115 - 25116060
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccc 369  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||    
T  25116115 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 25116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 43464245 - 43464194
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||||    
T  43464245 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacc 43464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 12498567 - 12498621
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  12498567 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 12498982 - 12498928
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  12498982 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 26571218 - 26571164
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  26571218 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 34576870 - 34576920
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||| ||||||    
T  34576870 ttaattgcactttcccccctatcttttgctaattgtgcgattttacacccc 34576920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 43463759 - 43463809
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcacccc 43463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 9665879 - 9665828
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||| |||||||||||||||||||||| |||||||  |||||||||||    
T  9665879 ggcttaattccacttttccccctatcttttgctaattgtg-cattttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 21207229 - 21207280
Alignment:
Q  318 ttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 9665560 - 9665609
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||| |||||||  ||||||||||||    
T  9665560 ttaattgcacttttcccc-tatcttttgctaattgtgcaattttgcacccc 9665609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 10098991 - 10098941
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| |||||  |||| |||||||| |||||||||||||    
T  10098991 ttaattgcacttttcctcctatagtttgtcaattgtgcgattttgcacccc 10098941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 11350808 - 11350861
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  11350808 ggcttaattgcatttttcacccctatcttttgccaattgtg-cattttgcacccc 11350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 16466796 - 16466746
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||||||||| ||||||| |||||| ||||||| |||||||||    
T  16466796 ggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 19515017 - 19514963
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  19515017 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 19514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 365
Target Start/End: Original strand, 22729008 - 22729058
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcac 365  Q
    |||||||||||||||||||||||||  ||||  ||||||| ||||||||||    
T  22729008 ggcttaattgcacttttccccctatagtttgtaaattgtgcgattttgcac 22729058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 12441364 - 12441320
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattt 360  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||    
T  12441364 ggcttaattgcactttt-cccctatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 23011432 - 23011383
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||| ||| |||||||||  ||||||| ||||||||||||    
T  23011432 ttaattgcactttttcccttatcttttgttaattgtgcgattttgcaccc 23011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 41382896 - 41382945
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||| ||| ||||||||||||||  ||||||| ||||||||||||    
T  41382896 ttaattgcattttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 2817626 - 2817582
Alignment:
Q  317 cttaattgcacttttccccctatcttttgccaattgtgtgatttt 361  Q
    |||||||||||||||||||||||  ||||| ||||||| ||||||    
T  2817626 cttaattgcacttttccccctatagtttgcgaattgtgcgatttt 2817582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 370
Target Start/End: Complemental strand, 5187884 - 5187828
Alignment:
Q  315 ggcttaattgcacttttccccct-atcttttgccaattgtgtgattttgcaccccct 370  Q
    ||||||||||||||||| ||||| ||||||||  |||||||  ||||||||||||||    
T  5187884 ggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccct 5187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 19514525 - 19514580
Alignment:
Q  315 ggcttaattgcacttttccccc--tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| |||||  |||  ||||||||||||| |||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcacccc 19514580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 34147564 - 34147512
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||||||| ||||||||  |||| |||||||| |||||||||||    
T  34147564 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacc 34147512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 3930533 - 3930477
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  3930533 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccccctc 3930477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 11241714 - 11241661
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  11241714 ggcttaattgtacttttccccctatcttttgccaattgtgggattttgcacccc 11241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 22681576 - 22681631
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  22681576 gcttaattgcactttcccccctatcttttgtcaattgtgcgattttgcaccccctc 22681631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 43051306 - 43051252
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  43051306 ggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcacccc 43051252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 50678779 - 50678833
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  50678779 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 50678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 56505693 - 56505747
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  56505693 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 11529169 - 11529222
Alignment:
Q  316 gcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcacccc 11529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 319 - 371
Target Start/End: Complemental strand, 49178866 - 49178813
Alignment:
Q  319 taattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctc 49178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 35393829 - 35393773
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| ||||||||||||| ||||||| || |||||||||||||    
T  35393829 ggcttaattgcacttttcaccctatcttttgctaattgtgcgaatttgcaccccctc 35393773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 36096526 - 36096475
Alignment:
Q  318 ttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 36096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 16555871 - 16555817
Alignment:
Q  315 ggcttaattgcacttttccccct-atcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcacccc 16555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 24775837 - 24775783
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  24775837 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacccc 24775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 36095817 - 36095871
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  36095817 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 36095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 50679478 - 50679424
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcacccc 50679424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 8181992 - 8182049
Alignment:
Q  316 gcttaattgcactttt-ccccctatc-ttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccctc 8182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 13198960 - 13198903
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||    
T  13198960 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 13198903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 16555515 - 16555572
Alignment:
Q  315 ggcttaattgcacttttccccct-atcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||||| ||||||||  ||||||| ||||||||||||||||    
T  16555515 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 16555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 18077256 - 18077199
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||    
T  18077256 ggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctc 18077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 26207361 - 26207414
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  26207361 ggcttaattgcactttcccccctatagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 54508815 - 54508868
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||||    
T  54508815 ggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 371
Target Start/End: Complemental strand, 8488534 - 8488479
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| || |||||||| | ||||||| ||||||||||||||||    
T  8488534 gcttaattgcacttttcgccttatctttttctaattgtgcgattttgcaccccctc 8488479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 4239420 - 4239366
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 4239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 7603472 - 7603422
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcac 365  Q
    ||||||||||||||||| ||||||||||||  |||||||| ||||||||||    
T  7603472 ggcttaattgcactttttcccctatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 9023244 - 9023298
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  ||||||||||||| |||||||||||||    
T  9023244 ggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcacccc 9023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 13198606 - 13198660
Alignment:
Q  318 ttaattgcacttttccccct-atcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||| || | ||||||||||||||||| ||||||||||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctc 13198660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 28196346 - 28196400
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  28196346 ggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 28196827 - 28196773
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  28196827 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 32703704 - 32703650
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 23539841 - 23539893
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  23539841 ggcttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcacccc 23539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 25161879 - 25161932
Alignment:
Q  316 gcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 48405962 - 48406015
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||||||||| ||  ||||||||||||    
T  48405962 ggcttaattgcacttttccccctatagtttgccaattatgcaattttgcacccc 48406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 169013 - 169068
Alignment:
Q  315 ggcttaattgcacttttc--cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||  |||||||  ||||||||||||| |||||||||||||    
T  169013 ggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcacccc 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 3930179 - 3930235
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| ||||||||||||   |||| || ||||||||||||||||    
T  3930179 ggcttaattgcactttttcccctatcttttattaattatgcgattttgcaccccctc 3930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 27304718 - 27304773
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||| ||||||||| |||||| ||| ||||||| ||||||||||||||||    
T  27304718 ggcttaattgcccttttcccc-tatcttctgctaattgtgcgattttgcaccccctc 27304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 9380795 - 9380744
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcac 365  Q
    |||||||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  9380795 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 43050610 - 43050661
Alignment:
Q  318 ttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||  ||||||||||| ||||||||| |||||||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 43050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 293271 - 293217
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  |||| |||||||| |||||||||||||    
T  293271 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 9023734 - 9023680
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  9023734 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 9023680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 9380307 - 9380361
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 26207800 - 26207746
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||||||| |||  ||||||||||||| |||||||||||||    
T  26207800 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 32703225 - 32703279
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||| ||||||||    
T  32703225 ggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 39744519 - 39744465
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  39744519 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 39744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 45830250 - 45830196
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||| ||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  45830250 ggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacacccc 45830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 49178644 - 49178694
Alignment:
Q  320 aattgcactttt-ccccctatctttt-gccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 11241389 - 11241446
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||| || |||||||||  ||||||| ||||||||| ||||||    
T  11241389 ggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctc 11241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 23540306 - 23540253
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||||| |||||||  |||| |||||||| ||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccc 23540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 25225452 - 25225399
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||||||||| |  | |||||||||||||||||||| ||||||||||||    
T  25225452 ggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 27304943 - 27304890
Alignment:
Q  320 aattgcactttt-ccccctatctttt-gccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||| ||||||||||||| || ||||||| ||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcaccccctc 27304890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 48406435 - 48406386
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||| ||||| ||||||||  ||||||||||||| ||||||||||||    
T  48406435 ttaattgtactttcccccctataatttgccaattgtgcgattttgcaccc 48406386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 8182227 - 8182171
Alignment:
Q  315 ggcttaattgcacttttc-cccctatctttt-gccaattgtgtgattttgcaccccc 369  Q
    |||||||||||||||||| ||||||| |||| || ||||||| ||||||||||||||    
T  8182227 ggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcaccccc 8182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 22681933 - 22681881
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||||| |||||||||||  |||||||  ||||||||||    
T  22681933 ggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 25162352 - 25162316
Alignment:
Q  329 tttccccctatcttttgccaattgtgtgattttgcac 365  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  25162352 tttccccctatattttgtcaattgtgtgattttgcac 25162316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 35393489 - 35393529
Alignment:
Q  324 gcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    ||||||||||||| || |||||| |||||||||||||||||    
T  35393489 gcacttttcccccgattttttgctaattgtgtgattttgca 35393529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 39086677 - 39086625
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||| ||| |||  ||||||||||||| |||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacc 39086625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 56506628 - 56506588
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtg 354  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  56506628 ggcttaattgcacttttcacccttatcttttgccaattgtg 56506588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 47871175 - 47871121
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccc 369  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  47871175 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 20969073 - 20969019
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 42627599 - 42627550
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  42627599 ggcttaattgcacttttccctctatcttttgctaattgtgtgattttgca 42627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 42672978 - 42673031
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  42672978 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 3353128 - 3353181
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  3353128 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 10293963 - 10293906
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 10293906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 18875245 - 18875188
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctc 18875188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 24485513 - 24485460
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||||  ||||||||||||| |||||||||||||    
T  24485513 ggcttaattgcacttttctccctatagtttgccaattgtgcgattttgcacccc 24485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 40848521 - 40848574
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  40848521 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 42673349 - 42673296
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  42673349 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 8315135 - 8315083
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||| |||||||| ||||| |||||||| ||||||||||||    
T  8315135 ggcttaattgcactttcccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 17372298 - 17372354
Alignment:
Q  315 ggcttaattgcac-ttttccccctatcttttgccaattgtgtgattttgcaccccct 370  Q
    ||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||    
T  17372298 ggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccct 17372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 21895657 - 21895712
Alignment:
Q  315 ggcttaattgcacttttccccc--tatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||    
T  21895657 ggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcacccc 21895712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 1101141 - 1101087
Alignment:
Q  318 ttaattgcacttttccccctatctttt-gccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||| |||||||||||| | |||||||| ||||||||||||||||    
T  1101141 ttaattgcacttttgcccctatctttttgtcaattgtgcgattttgcaccccctc 1101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 1928484 - 1928434
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||| ||| | ||||||||||||||||||||| |||||||||||||    
T  1928484 ttaattgcattttcctccctatcttttgccaattgtgcgattttgcacccc 1928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 14016014 - 14015964
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||||||    
T  14016014 ttaattgcacttttcatcctatcttttgctaattgtgcgattttgcacccc 14015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 40849015 - 40848961
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  40849015 ggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 40848961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 48159897 - 48159951
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  48159897 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 1927772 - 1927825
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||||||| ||||||| |||||||||||||||| || ||||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 8314013 - 8314066
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 9027086 - 9027033
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||| |||||||||||||||||||||| |||||||  ||||| ||||||    
T  9027086 ggcttaatttcacttttccccctatcttttgctaattgtgcaattttacacccc 9027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 10293608 - 10293665
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||| ||||  ||||||||||||| |||||||| ||||||||||||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctc 10293665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 18874882 - 18874935
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||| |||||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  18874882 ggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 20968718 - 20968775
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||| ||||||| ||||||||||  ||||||| ||||||||||||||||    
T  20968718 ggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctc 20968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 21896564 - 21896511
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| |||| ||||||| ||||| |||||||| |||||||||||||    
T  21896564 ggcttaattgcattttttcccctatattttgtcaattgtgcgattttgcacccc 21896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 26540694 - 26540747
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||| ||||||| ||||| ||||||||  |||||||||||||||    
T  26540694 ttaattgcacttttgcccctattttttgtcaattgtgcaattttgcaccccctc 26540747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 45060925 - 45060872
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||| |||||    
T  45060925 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 366
Target Start/End: Complemental strand, 3353597 - 3353553
Alignment:
Q  322 ttgcacttttccccctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||    
T  3353597 ttgcacttttccccctatagtttgccaattgtgcgattttgcacc 3353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 22429159 - 22429211
Alignment:
Q  316 gcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||||||||||| ||||||| |||||||||||||| || |||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 13657445 - 13657500
Alignment:
Q  315 ggcttaattgcacttttccccctatctttt-gccaattgtgtgattttgcaccccc 369  Q
    ||||||||| |||||||| |||||| |||| |||||||||| ||||||||||||||    
T  13657445 ggcttaattacacttttctccctatttttttgccaattgtgcgattttgcaccccc 13657500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 27238951 - 27238900
Alignment:
Q  318 ttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 27238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 47666389 - 47666335
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||||||||||||  ||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 47870823 - 47870877
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtg-attttgcacccc 368  Q
    ||||||||||||||||| |||||||||||||| |||| || | ||||||||||||    
T  47870823 ggcttaattgcactttttcccctatcttttgctaattatgcgaattttgcacccc 47870877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 48160387 - 48160333
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| ||||| |||  ||||||||||||| |||||||||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 53687888 - 53687942
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  |||| |||||||| |||||||||||||    
T  53687888 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 53687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 53688356 - 53688306
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcac 365  Q
    ||||||||||||||||  |||||||  ||||||||||||| ||||||||||    
T  53688356 ggcttaattgcactttctcccctatagtttgccaattgtgcgattttgcac 53688306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 14015923 - 14015867
Alignment:
Q  318 ttaattgcactttt--ccccctatctttt-gccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||  ||||||||||||| |||||||||| |||||||||| |||||    
T  14015923 ttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcactccctc 14015867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 26007182 - 26007235
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||| ||||||||  |||| |||||||| |||||||||||||    
T  26007182 ggcttaattgcattttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 27238465 - 27238518
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||| ||||||||| |||||  ||||||||||||| ||||||||||||    
T  27238465 ggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccc 27238518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 13657673 - 13657621
Alignment:
Q  318 ttaattgcacttttc-cccctatctttt-gccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||  |||||||||||| |||||||||| |||||||||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 17372645 - 17372594
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||| ||| |||| | ||||||| |||||||||||||    
T  17372645 gcttaattgcacttttcccc-tatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 45060596 - 45060644
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttg 362  Q
    ||||||||||||||||||||| ||||||||||| |||| || |||||||    
T  45060596 ggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 45060821 - 45060769
Alignment:
Q  320 aattgcacttttccccctatc-ttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||| |||||||| |||||||||||||  ||||||||||| ||||    
T  45060821 aattgcacttttgcccctatctttttgccaattgttcgattttgcacctcctc 45060769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 1511 - 1564
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  1511 ggcttaattgcactttttcctctatcttttgccaattgtgtgattttgcacccc 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 1834 - 1781
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||||||||||   |||||| ||||||||||| ||||    
T  1834 ttaattgcacttttccccctatcttttgtttattgtgcgattttgcacctcctc 1781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 1474 - 1417
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctc 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 1118 - 1175
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||    
T  1118 ggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctc 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 13936723 - 13936776
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  13936723 ggcttaattgcacttttccccctatcttttaccaattgtgcgattttgcacccc 13936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 41662457 - 41662400
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 41662400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 43246230 - 43246173
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  43246230 ggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctc 43246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 765736 - 765791
Alignment:
Q  317 cttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 9823415 - 9823361
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  9823415 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 9823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 39724102 - 39724048
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 39724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 12281124 - 12281181
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  12281124 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctc 12281181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 15156239 - 15156182
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctc 15156182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 16929296 - 16929239
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctc 16929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 13026635 - 13026687
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  13026635 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 371
Target Start/End: Complemental strand, 43162588 - 43162536
Alignment:
Q  319 taattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  43162588 taattgcacttttccccctatcttttgtcaatcgtgcgattttgcaccccctc 43162536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 13027332 - 13027281
Alignment:
Q  318 ttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 13027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 15042148 - 15042198
Alignment:
Q  318 ttaattgcacttttccccct-atcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccc 15042198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 22851390 - 22851444
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 22851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 24473343 - 24473397
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcacccc 24473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 12281480 - 12281423
Alignment:
Q  315 ggcttaattgcacttttccccct-atcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||||| ||||||||  ||||||| ||||||||||||||||    
T  12281480 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 12281423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 15155883 - 15155940
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  15155883 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 15155940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 16928942 - 16928999
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||    
T  16928942 ggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctc 16928999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 37752470 - 37752413
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 37752413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 43245871 - 43245928
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||    
T  43245871 ggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctc 43245928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 7127660 - 7127708
Alignment:
Q  322 ttgcacttttccccctatcttttgccaattgtgtgattttgcaccccct 370  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  7127660 ttgcacttttccccctatcttttgctaattgtgcgattttgcatcccct 7127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 34313765 - 34313820
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||    
T  34313765 ggcttaattgcacttttcccc-tatcttttgttaattgtgcgattttgcaccccctc 34313820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 43162234 - 43162290
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||||||| |||||  ||||||| ||||||||||| ||||    
T  43162234 ggcttaattgcacttttccccctatattttgttaattgtgcgattttgcacctcctc 43162290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 74688 - 74739
Alignment:
Q  317 cttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| | ||||||||| ||||||| |||||||||||||    
T  74688 cttaattgcacttttccctccatcttttgctaattgtgcgattttgcacccc 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 9822748 - 9822802
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||||||||||  |||||||| |||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcacccc 9822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 23123338 - 23123392
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||| ||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacacccc 23123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 23123567 - 23123514
Alignment:
Q  317 cttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||| |||| |||||||||| ||||||| ||||||||||||||||    
T  23123567 cttaattgcacttt-ccccttatcttttgctaattgtgcgattttgcaccccctc 23123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 37752084 - 37752138
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 6092777 - 6092825
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  6092777 ggcttaattgca-ttttccccctatcttttgtcaattgtgcgattttgca 6092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 9623935 - 9623882
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||  |||||  ||||||||| |||||||||||||||||    
T  9623935 ggcttaattgcacttttcatcctatagtttgccaatcgtgtgattttgcacccc 9623882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 22786843 - 22786892
Alignment:
Q  318 ttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 33747984 - 33748033
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||||||||  || |||||||||| |||||||||||||||||    
T  33747984 ggcttaattgcacttttttccatatcttttgctaattgtgtgattttgca 33748033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 41662107 - 41662164
Alignment:
Q  315 ggcttaattgcac-ttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||| |||||||| |||||||||  ||||||| ||||||||||||||||    
T  41662107 ggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctc 41662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 15442765 - 15442817
Alignment:
Q  317 cttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcacccc 15442817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 18020140 - 18020085
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| ||| |||||||||  ||||||| ||||||||||||||||    
T  18020140 ggcttaattgcacttttaccc-tatcttttgttaattgtgcgattttgcaccccctc 18020085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 25438794 - 25438846
Alignment:
Q  317 cttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 41662521 - 41662573
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||    
T  41662521 ggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 767759 - 767720
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtg 354  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  767759 ggcttaattgcacttttccccctatcttttgttaattgtg 767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 354
Target Start/End: Original strand, 9465607 - 9465646
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtg 354  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  9465607 ggcttaattgcacttttcctcctatcttttgtcaattgtg 9465646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 3307338 - 3307388
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||| ||||| ||||||||||||| |||||||| |||||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgca 3307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 3463871 - 3463817
Alignment:
Q  318 ttaattgcacttttccccctatctttt-gccaattgtgtgattttgcaccccctc 371  Q
    |||||||||| ||| |||||||||||| |||||||||| ||||||| ||||||||    
T  3463871 ttaattgcacatttacccctatctttttgccaattgtgcgattttgtaccccctc 3463817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 13937443 - 13937389
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||||| ||||| |||||||| || ||||||||||    
T  13937443 ggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcacccc 13937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 24473822 - 24473768
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||  ||||||  ||||||||||||| |||||||||||||    
T  24473822 ggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcacccc 24473768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 25439176 - 25439126
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  25439176 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcacccc 25439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 34498609 - 34498555
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  ||||| ||||||| |||||||||||||    
T  34498609 ggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcacccc 34498555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 37396708 - 37396762
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  |||||| |||||| |||||||||||||    
T  37396708 ggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcacccc 37396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 37397199 - 37397145
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  ||||||||||||| |||||||| ||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 37397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 3463999 - 3463946
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||||| ||||||| |||||| ||||||| ||| ||||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 371
Target Start/End: Original strand, 18019915 - 18019968
Alignment:
Q  320 aattgcactttt-ccccctatcttttgcc-aattgtgtgattttgcaccccctc 371  Q
    |||||||||||| ||||||||||||| || ||||||| ||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctc 18019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 366
Target Start/End: Complemental strand, 22851990 - 22851958
Alignment:
Q  334 ccctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||||||||||| |||||||||||    
T  22851990 ccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 3687710 - 3687653
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 3687653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 9412379 - 9412322
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  9412379 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 9412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 27096392 - 27096339
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  27096392 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgcatcccctc 27096339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 27181911 - 27181964
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  27181911 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgcatcccctc 27181964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 13772641 - 13772695
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  13772641 ggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacccc 13772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 44599489 - 44599543
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 44600189 - 44600135
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  44600189 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 35079960 - 35080012
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||||||||||    
T  35079960 ggcttaattgcacttttccccctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 371
Target Start/End: Complemental strand, 8953941 - 8953886
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||||||||||||  |||||||  |||||||||||||||    
T  8953941 gcttaattgcacttttccccctatcttttgttaattgtgcaattttgcaccccctc 8953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 13863313 - 13863367
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  13863313 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 13863367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 9412023 - 9412080
Alignment:
Q  315 ggcttaattgcacttttccccct-atcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||||| ||||||||  ||||||| ||||||||||||||||    
T  9412023 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 9412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 13744286 - 13744233
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  13744286 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 13772955 - 13772898
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccctc 13772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 48359320 - 48359373
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  48359320 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 6908213 - 6908265
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||    
T  6908213 ggcttaattgcacttttccccctatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 23686421 - 23686473
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||||||||||||||||||| ||||||   |||||||||||    
T  23686421 ggcttaattgcacttttccccctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 3687353 - 3687411
Alignment:
Q  315 ggcttaattgcacttttcccc--ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||  ||||||||||  ||||||| ||||||||||||||||    
T  3687353 ggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctc 3687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 18864455 - 18864404
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||| ||||||||||||||  ||||||||||||| |||||||||||    
T  18864455 ggcttaattgtacttttccccctatagtttgccaattgtgcgattttgcacc 18864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 369
Target Start/End: Complemental strand, 42419079 - 42419028
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccc 369  Q
    ||||||||||||||||||||||  ||||||||||||| | ||||||||||||    
T  42419079 ttaattgcacttttccccctatagtttgccaattgtgcgtttttgcaccccc 42419028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 8643820 - 8643766
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||    
T  8643820 ggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 8643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 9035347 - 9035293
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 10533034 - 10533088
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  10533034 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 13864010 - 13863964
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattt 360  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||    
T  13864010 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 37888833 - 37888887
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 37889313 - 37889259
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37889313 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 37972450 - 37972396
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37972450 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 3204669 - 3204721
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  3204669 ggcttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcacccc 3204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||||||| |||||||| |||||| ||||||| ||||||||||||    
T  6908534 ttaattgcactttcccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 371
Target Start/End: Original strand, 38191387 - 38191440
Alignment:
Q  319 taattgcacttttccccctatctttt-gccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||    
T  38191387 taattgcactttttcccctatctttttgccaattgtgcgattttgcacctcctc 38191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 23686771 - 23686723
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttg 362  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  23686771 ggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 9034867 - 9034922
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccc 369  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||| |||||||||    
T  9034867 ggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcaccccc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 20418891 - 20418942
Alignment:
Q  318 ttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 27096047 - 27096094
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttg 362  Q
    |||||||||||||||| |||||||| |||||| ||||||| |||||||    
T  27096047 ggcttaattgcactttcccccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 27182256 - 27182209
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttg 362  Q
    |||||||||||||||| |||||||| |||||| ||||||| |||||||    
T  27182256 ggcttaattgcactttcccccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 3205147 - 3205093
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  3205147 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 5349784 - 5349733
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||  |||||||||||||  ||||||| |||||||||||||    
T  5349784 ggcttaattgcacttt--cccctatcttttgttaattgtgcgattttgcacccc 5349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 5735253 - 5735303
Alignment:
Q  316 gcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcac 365  Q
    ||||||||||||||||| ||||||||||| || ||||||| ||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 17156967 - 17157021
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  |||| |||||||| |||||||||||||    
T  17156967 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 17157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 20419378 - 20419324
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  20419378 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 20419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 22740156 - 22740210
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  |||| |||||||| |||||||||||||    
T  22740156 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 22740210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 29292922 - 29292972
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgca 364  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||||||||    
T  29292922 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 29292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 33628397 - 33628451
Alignment:
Q  317 cttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||| || |||||||||| |||||||  |||||||| ||||||    
T  33628397 cttaattgcacttttctccttatcttttgctaattgtgcaattttgcatcccctc 33628451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 36527387 - 36527437
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  36527387 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcacccc 36527437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 37971960 - 37972014
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||| |  ||||||||||||| |||||||||||||    
T  37971960 ggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcacccc 37972014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 46816365 - 46816311
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||| ||||||||| |||||| || |||||||||||||    
T  46816365 ggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcacccc 46816311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 34235738 - 34235779
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgt 355  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  34235738 ggcttaattgcacttttccctcccatcttttgccaattgtgt 34235779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 18925062 - 18925114
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||||||||  ||||||||||||| |||||||  ||||||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 18925373 - 18925322
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| | ||| |||||| ||||||| |||||||||||||    
T  18925373 gcttaattgcacttttcctc-tatattttgctaattgtgcgattttgcacccc 18925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 40017495 - 40017447
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||| |||||||||||||||||||   |||||||||||||| ||||    
T  40017495 ttaattgtacttttccccctatcttttattaattgtgtgattttacacc 40017447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 10039676 - 10039729
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  10039676 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 21031979 - 21032035
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  21031979 ggcttaattgcacttttccccctaacttttgctaattgtgcgattttgcaccccctc 21032035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 33828990 - 33829044
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 33829690 - 33829636
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  33829690 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 3404043 - 3403986
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  3404043 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 3403986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 3825530 - 3825583
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  3825530 ttaattgcacttttccccctatattttgctaattgtgcgattttgcaccccctc 3825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 22684411 - 22684358
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  22684411 ggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcacccc 22684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 22754657 - 22754710
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  22754657 ggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcacccc 22754710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 13579704 - 13579648
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||    
T  13579704 ggcttaattgcacttttctccctatcgtttgctaattgtgcgattttgcaccccctc 13579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 23250592 - 23250648
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||||    
T  23250592 ggcttaattgcactttttcccctatcttttgtcaattgtgagatcttgcaccccctc 23250648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 3403717 - 3403771
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 11656836 - 11656779
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctc 11656779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 18241854 - 18241911
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  18241854 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 30388062 - 30388111
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    |||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  30388062 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 30388402 - 30388360
Alignment:
Q  328 ttttccccctatcttttgccaattgtgtgattttgcaccccct 370  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  30388402 ttttccccctatcttttgctaattgtgcgattttgcaccccct 30388360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 31598778 - 31598732
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgca 364  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||    
T  31598778 ttaattgcacttttccccctatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 33655168 - 33655114
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccc 369  Q
    ||||||||||||||| ||||| |||||||||| |||||||  |||||||||||||    
T  33655168 ggcttaattgcacttgtccccttatcttttgctaattgtgcaattttgcaccccc 33655114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 371
Target Start/End: Complemental strand, 18242190 - 18242153
Alignment:
Q  334 ccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  18242190 ccctatcttttgccaattgtgcgattttgcaccccctc 18242153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 29074425 - 29074372
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||| |||| ||||||||  ||||||||||||| |||||||||||||    
T  29074425 ggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 29079189 - 29079136
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||| |||| ||||||||  ||||||||||||| |||||||||||||    
T  29079189 ggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 29106998 - 29106945
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||| |||| ||||||||  ||||||||||||| |||||||||||||    
T  29106998 ggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 31598326 - 31598274
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||| | ||||||| ||||||||||| ||||||| ||||||||||||    
T  31598326 ggcttaattgtatttttccctctatcttttgctaattgtgcgattttgcaccc 31598274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 33971994 - 33972050
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||| |||| |||||||||||||  ||||||  ||||||||||||||||    
T  33971994 ggcttaattgcagtttttcccctatcttttgttaattgtacgattttgcaccccctc 33972050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 7654602 - 7654548
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  7654602 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 7654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 10087912 - 10087858
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| | |  ||||||||||||| |||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcacccc 10087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 33974353 - 33974299
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||||||| |||  ||||||||||||| |||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 371
Target Start/End: Original strand, 2762611 - 2762664
Alignment:
Q  320 aattgcactttt-ccccctatctttt-gccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||| ||||||||||||| || ||||||| ||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 2762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 10039893 - 10039840
Alignment:
Q  320 aattgcactttt-ccccctatctttt-gccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||| ||||||||||||| || ||||||| ||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 10039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 21032334 - 21032285
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgc 363  Q
    |||||||||||||||||| |||||||||||||  ||||||| ||||||||    
T  21032334 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 371
Target Start/End: Original strand, 12714436 - 12714488
Alignment:
Q  320 aattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||| ||||||||||||||  ||||||| ||||||||| ||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgcagcccctc 12714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 23250945 - 23250889
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||| |||||||||||  ||||||||||||| ||||||| || |||| ||||||||    
T  23250945 ggcttgattgcactttttgccctatcttttgctaattgtgcgaatttgtaccccctc 23250889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 20347518 - 20347461
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  20347518 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 20347461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 30190923 - 30190980
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  30190923 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 30190980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 32673193 - 32673141
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccct 370  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgcaccccct 32673141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 2639536 - 2639482
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  2639536 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 2639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 6171510 - 6171456
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  6171510 ggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 18296747 - 18296693
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  18296747 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 26841587 - 26841641
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  26841587 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 11883623 - 11883680
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  11883623 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 11883980 - 11883923
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 6171156 - 6171207
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  6171156 ggcttaattgcacttttccccctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 2638820 - 2638874
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  2638820 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 2638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 18055050 - 18055103
Alignment:
Q  317 cttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  18055050 cttaattgcacttttcccccta-cttttgctaattgtgcgattttgcaccccctc 18055103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 24832331 - 24832385
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  24832331 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 24832385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 26842292 - 26842238
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 40469780 - 40469726
Alignment:
Q  318 ttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctc 40469726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 43495535 - 43495481
Alignment:
Q  318 ttaattgcacttttccccctatc-ttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  43495535 ttaattgcacttttccccctatctttttgtcaattgtgcgattttgcaccccctc 43495481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 18296077 - 18296130
Alignment:
Q  316 gcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 26737482 - 26737537
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| || |||||||||| ||||||| ||||||||||||||||    
T  26737482 ggcttaattgcacttttctcc-tatcttttgctaattgtgcgattttgcaccccctc 26737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 29230282 - 29230334
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  29230282 ggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 7591204 - 7591255
Alignment:
Q  318 ttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 7591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 40221313 - 40221364
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||| |||||||||||||||||| ||||||  |||||||||||    
T  40221313 ggcttaattgcacctttccccctatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 5378661 - 5378715
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  5378661 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 17850978 - 17851032
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 26737835 - 26737781
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||||||||| || |||| |||||||||||||    
T  26737835 ggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 37720204 - 37720258
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37720204 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 41790966 - 41790912
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||    
T  41790966 ggcttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 29343584 - 29343633
Alignment:
Q  318 ttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  29343584 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 30191279 - 30191222
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| ||||||||   ||||||| ||||||||||||||||    
T  30191279 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 30191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 40469427 - 40469484
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||| | ||||||| |||||||||||| ||||||| ||||||||||||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctc 40469484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 6495775 - 6495723
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacc 366  Q
    ||||||||||||||||||| ||||||||||||  ||||||| |||||||||||    
T  6495775 ggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 16911321 - 16911269
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||  |||||||  ||||||||||||| |||||||||||||    
T  16911321 gcttaattgcactttcgcccctatagtttgccaattgtgcgattttgcacccc 16911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 17346088 - 17346032
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| ||  |||||||||| ||||||| ||||||||||| ||||    
T  17346088 ggcttaattgcactttttcctttatcttttgctaattgtgcgattttgcacctcctc 17346032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 18750178 - 18750126
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||| |||||||||  |||| |||||||| |||||||||||||    
T  18750178 gcttaattgcacttctccccctatagtttgtcaattgtgcgattttgcacccc 18750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 43495658 - 43495602
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||| || ||||| |||||| ||||||| ||||||||| ||||||    
T  43495658 ggcttaattgcactttcccacctatattttgctaattgtgcgattttgcatcccctc 43495602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 8851151 - 8851202
Alignment:
Q  318 ttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 26692871 - 26692820
Alignment:
Q  318 ttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 26692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 5380013 - 5379959
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  ||| ||||||||| |||||||||||||    
T  5380013 ggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 6325399 - 6325349
Alignment:
Q  317 cttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||||||||||| |||  ||||||||||||| |||||||||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 6325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 7664727 - 7664673
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| ||||||  |||| |||||||| |||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 7664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 8851636 - 8851582
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  8851636 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 8851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 15920781 - 15920835
Alignment:
Q  318 ttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||| |||||||||| |||||||||||  ||||||| ||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctc 15920835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 16910827 - 16910881
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||||||| | |  ||||||||||||| |||||||||||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcacccc 16910881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 20347163 - 20347217
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||| ||||||||||| ||||||||||  ||||||| |||||||||||||    
T  20347163 ggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc 20347217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 41790494 - 41790544
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||| ||||||||||||  |||| |||||||| |||||||||||||    
T  41790494 ttaattgcatttttccccctatagtttgtcaattgtgcgattttgcacccc 41790544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 7980056 - 7980003
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| || ||||  ||||| ||||||| |||||||||||||    
T  7980056 ggcttaattgcactttttcctctatagtttgctaattgtgcgattttgcacccc 7980003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 15921081 - 15921032
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||| ||||||| |||||||||||||||||  ||||||| ||||    
T  15921081 ttaattgcacctttccccgtatcttttgccaattgtacgattttgaaccc 15921032  T

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Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 17345736 - 17345788
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| |||||||||| |||| ||  |||||||||||||||    
T  17345736 ttaattgcacttttcccc-tatcttttgctaattatgcaattttgcaccccctc 17345788  T

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Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 43495309 - 43495366
Alignment:
Q  315 ggcttaattgcacttttccc-cctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||| ||||| |||||| ||||||| |||||| || ||||||    
T  43495309 ggcttaattgcacttttcccacctatattttgctaattgtgcgatttttcatcccctc 43495366  T

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Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 411923 - 411979
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  411923 ggcttaattgcactttaccccctatcttttgtcaattgtgcgattttgcaccccctc 411979  T

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Target: scaffold0069 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 50560 - 50506
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccc 369  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  50560 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccc 50506  T

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Target: scaffold0192 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 25423 - 25366
Alignment:
Q  315 ggcttaattgcacttttccccc-tatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  25423 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 25366  T

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Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 438930 - 438987
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 438987  T

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Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  318 ttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  183367 ttaattgcacttttccccctatcttttgtcaattgtacgattttgcaccc 183416  T

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Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 439253 - 439196
Alignment:
Q  315 ggcttaattgcac-ttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||| |||||||| |||||||||| ||||||| ||||||||| ||||||    
T  439253 ggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctc 439196  T

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Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 183716 - 183660
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||| ||||||| |||||| ||||||| || |||||||||||||    
T  183716 ggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctc 183660  T

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Target: scaffold0376 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 7653 - 7597
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||    
T  7653 ggcttaattgcactttttcccctatcttttgctaattgtgcgattttgtaccccctc 7597  T

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Target: scaffold0376; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 7455 - 7508
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| |||||||||||||| |||| || |||||||||||||    
T  7455 ggcttaattgcactttttcccctatcttttgctaattatgcgattttgcacccc 7508  T

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Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 17209 - 17153
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||    
T  17209 ggcttaattgcacttttccccctatcttttgctaattgtgcaattttgcaccgcctc 17153  T

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Target: scaffold0015; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 16853 - 16908
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    ||||||||||| ||||| |||||||||||||| ||||||| |||| |||||||||||    
T  16853 ggcttaattgc-ctttttcccctatcttttgctaattgtgcgattatgcaccccctc 16908  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 205687 - 205743
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccccctc 371  Q
    |||||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  205687 ggcttaattgcatttttctccctatcttttgctaattgtgcgattttgcaccccctc 205743  T

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Target: scaffold0328 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 6849 - 6795
Alignment:
Q  315 ggcttaattgcacttttc-cccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 6795  T

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Target: scaffold0328; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 6152 - 6206
Alignment:
Q  315 ggcttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||||||||| || ||||||||||| ||||||| |||||| ||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacacccc 6206  T

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Target: scaffold0460 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 816 - 763
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||    
T  816 ggcttaattgcactttttcccctatagtttgccaattgtgcgattttgcacccc 763  T

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Target: scaffold0598 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  316 gcttaattgcacttttccccctatcttttgccaattgtgtgattttgcaccc 367  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  6927 gcttaattgcactttcccccctatcttttgccaattgtg-cattttgcaccc 6877  T

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Target: scaffold0598; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 6609 - 6659
Alignment:
Q  317 cttaattgcacttttcccc-ctatcttttgccaattgtgtgattttgcacc 366  Q
    |||||||||||| |||||| ||||||||||  |||||||||||||||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

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Target: scaffold0535 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 10012 - 10062
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgca 364  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  10012 ggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 38749 - 38695
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  38749 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 38695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 185328 - 185274
Alignment:
Q  315 ggcttaattgcacttttcc-ccctatcttttgccaattgtgtgattttgcacccc 368  Q
    ||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacccc 185274  T

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Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 19621 - 19674
Alignment:
Q  315 ggcttaattgcacttttccccctatcttttgccaattgtgtgattttgcacccc 368  Q
    |||||||||||| |||||||| |||  ||||||||||||| |||||||||||||    
T  19621 ggcttaattgcaattttccccatatagtttgccaattgtgcgattttgcacccc 19674  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 9905 - 9960
Alignment:
Q  315 ggcttaattgcactttt-ccccctatcttttgccaattgtgtgattttgcaccccc 369  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||||| |||||||    
T  9905 ggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcaccccc 9960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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