View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12995_low_18 (Length: 250)
Name: NF12995_low_18
Description: NF12995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12995_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 10667715 - 10667956
Alignment:
| Q |
1 |
agttccttggaatggaagtctctagatcaaaacaaggtatatttctatctcaaaggaagtatgtgttggatctactaacagaagtgggtctcttagactg |
100 |
Q |
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| T |
10667715 |
agttctttggaattgaagtctctagatcaaaacaaggtatatttctatctcaaaggaagtatgtgttggatctactaacagaagtgggtctcttagactg |
10667814 |
T |
|
| Q |
101 |
taaaccaattgatactccaattgtacaaaagcacaaacttggagtatatgtggaccaagtgccaacgaacaaagagaggtgccaaaggttggtcggtaaa |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
10667815 |
taaaccaattgatactccaattgtacaaaaccacaaacttggagtatatgtggaccaagtgacaacgaacaaagagaggtgccaaaggttggtcggtaaa |
10667914 |
T |
|
| Q |
201 |
cttatatatttatttcatactctgccagacatagcctatgat |
242 |
Q |
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||||||||||||| ||||||||||||| |||||||||||||| |
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| T |
10667915 |
cttatatatttatctcatactctgccaaacatagcctatgat |
10667956 |
T |
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