View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1299_2D_high_5 (Length: 1117)

Name: NF1299_2D_high_5
Description: NF1299_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1299_2D_high_5
NF1299_2D_high_5
[»] chr8 (22 HSPs)
chr8 (17-475)||(3682805-3683258)
chr8 (867-1102)||(3682216-3682446)
chr8 (867-1099)||(36827342-36827574)
chr8 (867-1102)||(30392377-30392612)
chr8 (867-1099)||(14549529-14549756)
chr8 (871-1055)||(6200490-6200674)
chr8 (869-1015)||(44673109-44673255)
chr8 (871-1102)||(18169586-18169811)
chr8 (871-1102)||(18633152-18633377)
chr8 (889-1102)||(10661446-10661658)
chr8 (867-1079)||(33068913-33069120)
chr8 (17-195)||(3661277-3661455)
chr8 (708-799)||(3682514-3682605)
chr8 (867-1102)||(36909898-36910117)
chr8 (81-227)||(3666146-3666291)
chr8 (541-612)||(3682701-3682772)
chr8 (73-197)||(3675641-3675765)
chr8 (867-963)||(5802506-5802602)
chr8 (867-968)||(3006187-3006283)
chr8 (878-987)||(42496461-42496565)
chr8 (905-968)||(12659819-12659882)
chr8 (910-968)||(11219436-11219494)
[»] chr3 (23 HSPs)
chr3 (868-1102)||(6003944-6004178)
chr3 (867-1102)||(21586402-21586631)
chr3 (867-1102)||(35531712-35531942)
chr3 (888-1102)||(32880604-32880813)
chr3 (867-1012)||(48032691-48032836)
chr3 (959-1099)||(50562223-50562363)
chr3 (948-1099)||(33002818-33002969)
chr3 (867-977)||(10369610-10369720)
chr3 (960-1102)||(39098236-39098378)
chr3 (917-1105)||(43030721-43030895)
chr3 (867-977)||(35401784-35401894)
chr3 (867-977)||(51149282-51149392)
chr3 (867-977)||(4669207-4669317)
chr3 (888-977)||(34794923-34795012)
chr3 (867-977)||(33361312-33361422)
chr3 (867-979)||(27641772-27641879)
chr3 (1020-1102)||(27641871-27641953)
chr3 (905-972)||(42362768-42362835)
chr3 (871-972)||(8355795-8355896)
chr3 (905-972)||(38651589-38651656)
chr3 (905-972)||(46252994-46253061)
chr3 (911-972)||(2565856-2565917)
chr3 (871-968)||(10481129-10481226)
[»] chr7 (28 HSPs)
chr7 (867-1102)||(43429466-43429701)
chr7 (867-1102)||(42910231-42910461)
chr7 (867-1102)||(24360845-24361078)
chr7 (867-1102)||(32823894-32824119)
chr7 (867-1102)||(13852606-13852839)
chr7 (867-1102)||(36921106-36921338)
chr7 (867-1069)||(27054277-27054480)
chr7 (868-1102)||(31876197-31876426)
chr7 (867-1102)||(10069861-10070086)
chr7 (867-1102)||(22366748-22366973)
chr7 (879-1063)||(18672782-18672966)
chr7 (867-1102)||(47903532-47903752)
chr7 (867-977)||(3211756-3211866)
chr7 (867-1079)||(5932945-5933151)
chr7 (867-977)||(47070027-47070137)
chr7 (867-1079)||(31982221-31982423)
chr7 (867-977)||(10672178-10672288)
chr7 (889-977)||(47204093-47204181)
chr7 (868-977)||(12117959-12118068)
chr7 (867-963)||(8768280-8768376)
chr7 (867-958)||(11205992-11206083)
chr7 (941-1102)||(48675410-48675571)
chr7 (871-972)||(524383-524484)
chr7 (875-972)||(40849325-40849422)
chr7 (871-972)||(29628680-29628781)
chr7 (905-972)||(31287326-31287393)
chr7 (960-1015)||(36509031-36509086)
chr7 (918-972)||(30079153-30079207)
[»] chr5 (32 HSPs)
chr5 (867-1102)||(12680625-12680860)
chr5 (867-1102)||(2226433-2226668)
chr5 (867-1079)||(12165493-12165705)
chr5 (867-1079)||(38434006-38434218)
chr5 (867-1102)||(32520775-32521005)
chr5 (868-1102)||(36103162-36103396)
chr5 (869-1102)||(9161280-9161511)
chr5 (867-1044)||(36176439-36176616)
chr5 (867-1079)||(10174383-10174587)
chr5 (892-1102)||(332856-333068)
chr5 (867-1015)||(36176670-36176818)
chr5 (867-1102)||(30265348-30265577)
chr5 (867-977)||(701566-701676)
chr5 (867-977)||(666882-666992)
chr5 (867-977)||(11917804-11917914)
chr5 (867-977)||(27885697-27885807)
chr5 (867-977)||(8409335-8409445)
chr5 (867-977)||(38334365-38334475)
chr5 (867-977)||(15068825-15068935)
chr5 (867-977)||(30002347-30002457)
chr5 (955-1069)||(17084513-17084627)
chr5 (981-1102)||(35893283-35893405)
chr5 (867-959)||(42545822-42545914)
chr5 (917-1102)||(23781026-23781192)
chr5 (917-1102)||(23867979-23868145)
chr5 (969-1062)||(42544993-42545086)
chr5 (874-972)||(23623469-23623567)
chr5 (905-972)||(691159-691226)
chr5 (1020-1102)||(9988592-9988674)
chr5 (867-979)||(35893442-35893547)
chr5 (874-963)||(2423279-2423368)
chr5 (1057-1102)||(36176840-36176885)
[»] chr1 (22 HSPs)
chr1 (867-1102)||(33910326-33910561)
chr1 (869-1102)||(39256187-39256420)
chr1 (867-1102)||(45692094-45692324)
chr1 (867-1102)||(24910603-24910838)
chr1 (867-1102)||(16529041-16529276)
chr1 (888-1102)||(33474739-33474953)
chr1 (888-1102)||(32954377-32954586)
chr1 (871-1102)||(51251984-51252205)
chr1 (925-1069)||(11899370-11899514)
chr1 (867-1102)||(1160583-1160802)
chr1 (867-1102)||(44918839-44919059)
chr1 (888-977)||(5154968-5155057)
chr1 (888-977)||(8211639-8211728)
chr1 (879-1030)||(6722384-6722529)
chr1 (867-977)||(29707696-29707801)
chr1 (888-977)||(20494094-20494183)
chr1 (1007-1102)||(29389330-29389425)
chr1 (888-958)||(29390121-29390191)
chr1 (871-972)||(27507027-27507128)
chr1 (871-972)||(36202963-36203064)
chr1 (905-963)||(6248544-6248602)
chr1 (910-972)||(12974036-12974098)
[»] chr2 (16 HSPs)
chr2 (867-1099)||(25297806-25298038)
chr2 (867-1102)||(44979325-44979560)
chr2 (888-1102)||(44035607-44035821)
chr2 (867-1102)||(11376184-11376414)
chr2 (867-1083)||(18360117-18360333)
chr2 (867-1102)||(19936675-19936905)
chr2 (913-1102)||(17916454-17916645)
chr2 (868-1079)||(34910630-34910841)
chr2 (867-977)||(9811739-9811849)
chr2 (867-977)||(20420777-20420887)
chr2 (867-977)||(36412911-36413021)
chr2 (867-964)||(16579002-16579099)
chr2 (888-978)||(42785101-42785191)
chr2 (895-972)||(44085956-44086033)
chr2 (871-968)||(41166625-41166722)
chr2 (1027-1102)||(20420497-20420572)
[»] chr4 (33 HSPs)
chr4 (867-1099)||(48996380-48996612)
chr4 (867-1102)||(40899634-40899869)
chr4 (889-1102)||(32136990-32137203)
chr4 (878-1102)||(30193541-30193765)
chr4 (867-1102)||(8176162-8176387)
chr4 (891-1102)||(52345006-52345216)
chr4 (888-1102)||(40806396-40806602)
chr4 (889-1102)||(6333614-6333832)
chr4 (867-1102)||(10218981-10219206)
chr4 (925-1102)||(23937130-23937307)
chr4 (867-1102)||(31301697-31301922)
chr4 (867-993)||(26477743-26477869)
chr4 (867-977)||(29639994-29640104)
chr4 (867-977)||(50570572-50570682)
chr4 (867-977)||(42558082-42558192)
chr4 (888-1037)||(52345214-52345353)
chr4 (867-977)||(36078683-36078793)
chr4 (867-979)||(5261405-5261517)
chr4 (871-977)||(29643325-29643431)
chr4 (926-1015)||(43630918-43631007)
chr4 (905-972)||(45983798-45983865)
chr4 (874-972)||(48338805-48338903)
chr4 (1027-1102)||(29639753-29639828)
chr4 (871-974)||(48292945-48293048)
chr4 (900-977)||(51395253-51395330)
chr4 (874-970)||(21069527-21069622)
chr4 (1042-1102)||(43630849-43630909)
chr4 (905-968)||(1564606-1564669)
chr4 (905-972)||(3999221-3999288)
chr4 (905-972)||(8485145-8485212)
chr4 (905-972)||(41260576-41260643)
chr4 (909-972)||(41325862-41325925)
chr4 (875-972)||(36105989-36106086)
[»] chr6 (12 HSPs)
chr6 (867-1102)||(35039488-35039723)
chr6 (893-1102)||(33550621-33550830)
chr6 (867-1102)||(13801532-13801762)
chr6 (868-1102)||(25137442-25137675)
chr6 (888-1096)||(10591142-10591350)
chr6 (888-1102)||(15860026-15860239)
chr6 (867-984)||(10390590-10390707)
chr6 (867-977)||(12270905-12271015)
chr6 (867-977)||(5866632-5866742)
chr6 (867-1005)||(10493941-10494079)
chr6 (1020-1102)||(10390729-10390811)
chr6 (871-934)||(4577586-4577649)
[»] scaffold0059 (2 HSPs)
scaffold0059 (871-1102)||(69089-69320)
scaffold0059 (871-1064)||(77195-77388)
[»] scaffold0029 (2 HSPs)
scaffold0029 (867-1102)||(47320-47555)
scaffold0029 (867-1102)||(40124-40359)
[»] scaffold0013 (2 HSPs)
scaffold0013 (871-1102)||(106333-106564)
scaffold0013 (953-1102)||(128940-129089)
[»] scaffold0308 (1 HSPs)
scaffold0308 (871-977)||(5471-5577)
[»] scaffold0204 (1 HSPs)
scaffold0204 (874-972)||(26327-26425)
[»] scaffold0688 (1 HSPs)
scaffold0688 (910-968)||(1649-1707)


Alignment Details
Target: chr8 (Bit Score: 412; Significance: 0; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 17 - 475
Target Start/End: Complemental strand, 3683258 - 3682805
Alignment:
Q  17 ataatatggattgatccagaggctatgtagaaaaaatgagggtctgtgatagtatgctttagaatcaccacagcacaaaaagcaagcaatattcccaaca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3683258 ataatatggattgatccagaggctatgtagaaaaaatgagggtctgtgatagtatgctttagaatcaccacagcacaaaaagcaagcaatattcccaaca 3683159  T
Q  117 agatcttcactttcattgacctcttactcaaccatccaatcaaaacattcactgcaaaatccctctttgatcccattttgttgacaaaaaactaaaattc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3683158 agatcttcactttcattgacctcttactcaaccatccaatcaaaacattcactgcaaaatccctctttgatcccattttgttgacaaaaaactaaaattc 3683059  T
Q  217 agcaaccaaaatagggaggggnnnnnnnnncttctcaagaatttgtatttgtgctcacacaatattttggagtggtgtagttcgattgagtaattgtagt 316  Q
    ||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3683058 agcaaccaaaataggg-----gttttttttcttctcaagaatttgtatttgtgctcacacaatattttggagtggtgtagttcgattgagtaattgtagt 3682964  T
Q  317 gattggagaatgatgtattgatatggcgtggcacgaaaattattttattttttgagaccacattaactatgaaaccgtttcaaaaaagtccaaaatgcaa 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3682963 gattggagaatgatgtattgatatggcgtggcacgaaaattattttattttttgagaccacattaactatgaaaccgtttcaaaaaagtccaaaatgcaa 3682864  T
Q  417 atagggacattcttgatgtgggaaatgttttggcagaaaaataatataatttctttcga 475  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3682863 atagggacattcttgatgtgggaaatgttttggcagaaaaataatataatttctttcga 3682805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 3682446 - 3682216
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||||||   ||||| | |||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||||||     ||||||||||    
T  3682446 gcacttggttcaaatgaaatcggatgacttttccactgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaa-----ccaaaccaaa 3682352  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  3682351 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcaatttttccatttttccaccatcagg 3682252  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||||||||||||||||||||||||||||    
T  3682251 ttcaattctaatttcttaccatctatttcaattcat 3682216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 1e-75
Query Start/End: Original strand, 867 - 1099
Target Start/End: Original strand, 36827342 - 36827574
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| || |||||| | ||||||||| ||||||||| || |||| |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  36827342 gcacttggttcggctgaattcgaatgacttttgcactgaaccacacggtttggttcggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaaa 36827441  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| |||||||||| ||||| |||||| ||||||| ||||||||||    
T  36827442 ccgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagattaatctctttcgattcaatttttccattgttgcaccatcagg 36827541  T
Q  1067 ttcaattctaatttcttaccatctatttcaatt 1099  Q
    ||| ||||||||||||| |||||| ||||||||    
T  36827542 ttcgattctaatttctttccatctctttcaatt 36827574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 30392612 - 30392377
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||||||||||||| |||||||||||  ||||||||||  |||| ||||| |||||||||||| |||||| |||||||| ||||||||||||||    
T  30392612 gcacttggtttggatgaattcggatgacttttttactgaaccgcgcggtttggttcagtttgcggtttgtatctcaacaaccgaaccaaaccaaaccaaa 30392513  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||||| | ||| || |||    
T  30392512 ccgcaagaataatgaatattacttaaacatgtactagcccaattacatagcccaacaataatctcttttgattcgatttttccattgctgcactatgagg 30392413  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||  ||||||||| ||| |||||| ||| |||||||    
T  30392412 tttgattctaattcctttccatctcttttaattcat 30392377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 867 - 1099
Target Start/End: Complemental strand, 14549756 - 14549529
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||| |||||     ||||||||||    
T  14549756 gcacttggttcggatgaattcggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcatccgaa-----ccaaaccaaa 14549662  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||| |||||||  |||||||||    
T  14549661 ccgtaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcttttgattcgaattttccattgttgtaccatcagg 14549562  T
Q  1067 ttcaattctaatttcttaccatctatttcaatt 1099  Q
    ||| |||||| || ||| |||||| ||||||||    
T  14549561 ttcgattctatttcctttccatctctttcaatt 14549529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 871 - 1055
Target Start/End: Original strand, 6200490 - 6200674
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||| ||||||||| ||||||||||| ||||||| ||   ||||  |||||||||  ||||||||||| ||||||| || ||||||||||||||||||    
T  6200490 ttggttcggatgaattcggatgacttttgcactgaatcgtgcggtttcgttcggtttttggtttgcatcttagcaaccaaaccaaaccaaaccaaaccgc 6200589  T
Q  971 aagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgtt 1055  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  6200590 aagaataatgaatattactgaaacatgtactagcccaattacataacccaagaataatctcttttgattcgatttttccattgtt 6200674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 869 - 1015
Target Start/End: Complemental strand, 44673255 - 44673109
Alignment:
Q  869 acttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    |||||||| ||||||||| ||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||     
T  44673255 acttggttcggatgaattcggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaact 44673156  T
Q  969 gcaagaataatgaatattacctaaacatgtactagcccaattacata 1015  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  44673155 gcaagaataatgaatattacttaaacatgtactagcccaattacata 44673109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 871 - 1102
Target Start/End: Original strand, 18169586 - 18169811
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||| |||||| || |||| |||||| ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||     ||||| ||||| ||    
T  18169586 ttggttcggatga-ttcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaa-----ccaaatcaaactgc 18169679  T
Q  971 aagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttca 1070  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||| | |||||||||||| |||| || ||||||||||||      
T  18169680 aagaataatgaatattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttg 18169779  T
Q  1071 attctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||| ||| |||||| |||||||||||    
T  18169780 attctaattcctttccatctctttcaattcat 18169811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 871 - 1102
Target Start/End: Original strand, 18633152 - 18633377
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||| |||||| || |||| |||||| ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||     ||||| ||||| ||    
T  18633152 ttggttcggatga-ttcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaa-----ccaaatcaaactgc 18633245  T
Q  971 aagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttca 1070  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||| | |||||||||||| |||| || ||||||||||||      
T  18633246 aagaataatgaatattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttg 18633345  T
Q  1071 attctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||| ||| |||||| |||||||||||    
T  18633346 attctaattcctttccatctctttcaattcat 18633377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 889 - 1102
Target Start/End: Complemental strand, 10661658 - 10661446
Alignment:
Q  889 gatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattac 988  Q
    |||||||||| ||||||||| |  |||| |||| |||||||| ||||||||||||||||| ||  |||||||||||||||||||| |||||||||||  |    
T  10661658 gatgacttttgcactgaaccacgcggtttggtttggtttgcg-tttgcatctcagcaaccaaactaaaccaaaccaaaccgcaaggataatgaatatatc 10661560  T
Q  989 ctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccat 1088  Q
     ||||||||||||||||| |||||||| |  |||||| |||| ||||||||||||||||||||||||  ||||||| |||| |||||||||  || |||     
T  10661559 ttaaacatgtactagcccgattacatagctcaagaattatcttttttgattcgattttttcattgttgtaccatcatgttcgattctaattcatttccaa 10661460  T
Q  1089 ctatttcaattcat 1102  Q
    || |||||||||||    
T  10661459 ctctttcaattcat 10661446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 867 - 1079
Target Start/End: Complemental strand, 33069120 - 33068913
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||||||||||||| || ||||||||||| ||||||||| |      ||||| | |||||||||||||||| |||||||||| ||||| ||||||||    
T  33069120 gcacttggtttggatgatttcggatgacttttgcactgaaccacg-----cggtttgatttgcggtttgcatcttagcaaccgaaccaaacgaaaccaaa 33069026  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    || ||| |||||| |||||||| ||||  ||||| ||||||||||||||||  |||||||||||||||||||| ||||||| ||||||| ||||||||      
T  33069025 ccacaaaaataatcaatattacttaaatttgtaccagcccaattacataactcaagaataatctcttttgatttgatttttccattgttgcaccatcaaa 33068926  T
Q  1067 ttcaattctaatt 1079  Q
    ||| |||||||||    
T  33068925 ttcgattctaatt 33068913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 3661455 - 3661277
Alignment:
Q  17 ataatatggattgatccagaggctatgtagaaaaaatgagggtctgtgatagtatgctttagaatcaccacagcacaaaaagcaagcaatattcccaaca 116  Q
    |||||||||| || | |||||||| || |||||||||  || ||| |||||||||||||||||| ||| | ||||||||||||||||||||||||||| |    
T  3661455 ataatatggactgtttcagaggctttgaagaaaaaatttggctctctgatagtatgctttagaaccacaatagcacaaaaagcaagcaatattcccaaaa 3661356  T
Q  117 agatcttcactttcattgacctcttactcaaccatccaatcaaaacattcactgcaaaatccctctttgatcccatttt 195  Q
    ||||||||||||||||||| || || |||| |||||||| || ||||||||| |   ||||||||||||||||||||||    
T  3661355 agatcttcactttcattgatcttttcctcagccatccaaacataacattcaccggtgaatccctctttgatcccatttt 3661277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 708 - 799
Target Start/End: Complemental strand, 3682605 - 3682514
Alignment:
Q  708 cttatcgtgaaaatcacacactagagacagaagtgatagatactatgggtttgaatatagtatagggtttcacatatcaaattaggggtgtt 799  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  3682605 cttatcgtgaaattcacacactagagacagaagtgatagatactatgggtttgaatatagtataggatttcacacatcaaattaagggtgtt 3682514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 36909898 - 36910117
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||| ||| |||||||||| || ||||||| || ||||| ||  ||||||||||||||||||||||||||||||| |||||     ||||| ||||||    
T  36909898 gcacttagttcggatgaatttagacgacttttgcattgaactgcgcggttcggttcggtttgcggtttgcatctcaggaaccg-----aaccataccaaa 36909992  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||         ||||||||||||||||||||  |  ||||||||||| ||||||||| |||||| ||||||| ||||||||||    
T  36909993 ccgcaagaataatgaatat---------atgtactagcccaattacat-gctcaagaataatct-ttttgattccatttttccattgttgcaccatcagg 36910081  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||  |||||||||  || |||||| |||||||||||    
T  36910082 tttgattctaattcatttccatctctttcaattcat 36910117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 81 - 227
Target Start/End: Complemental strand, 3666291 - 3666146
Alignment:
Q  81 tcaccacagcacaaaaagcaagcaatattcccaacaagatcttcactttcattgacctcttactcaaccatccaatcaaaacattcactgcaaaatccct 180  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||| | |  ||| |||||||| | | ||||| |    
T  3666291 tcaccacagcacaaaaagcaagcaatattcccaaaaagatcttcactttcattgacctattcctcaaccagctagacaatacattcacgggagaatcctt 3666192  T
Q  181 ctttgatcccattttgttgacaaaaaactaaaattcagcaaccaaaa 227  Q
    |||||||||||||||| |||| |||||  |||||  |||||||||||    
T  3666191 ctttgatcccattttg-tgaccaaaaataaaaatctagcaaccaaaa 3666146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 541 - 612
Target Start/End: Complemental strand, 3682772 - 3682701
Alignment:
Q  541 tgaattacttcctttattaattcttttagtatattatatcaaatttttatttaatgatagttcccatgtctc 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  3682772 tgaattacttcctttattaattcttttagtatattatatcaaattttttgttaatgatggttcccatgtctc 3682701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 3675765 - 3675641
Alignment:
Q  73 ctttagaatcaccacagcacaaaaagcaagcaatattcccaacaagatcttcactttcattgacctcttactcaaccatccaatcaaaacattcactgca 172  Q
    |||||||  ||||| |||| |||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||  |  |||||||||||| |      
T  3675765 ctttagagccaccaaagcagaaaatgcaagcaatattcccaaaaagattttcactttcattgatctcttcctcaaccatatagacaaaacattcacaggg 3675666  T
Q  173 aaatccctctttgatcccattttgt 197  Q
     ||||||||||||||||||||||||    
T  3675665 gaatccctctttgatcccattttgt 3675641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 867 - 963
Target Start/End: Original strand, 5802506 - 5802602
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaacc 963  Q
    |||||||||| |||||| ||  ||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  5802506 gcacttggttcggatgagttcagatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccaaaccaaaccaaacc 5802602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 867 - 968
Target Start/End: Original strand, 3006187 - 3006283
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||| ||||||  ||||||||||      ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3006187 gcacttggttcggatgagttcggattacttttagactgaaccgcg-----cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 3006281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 878 - 987
Target Start/End: Original strand, 42496461 - 42496565
Alignment:
Q  878 ggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaata 977  Q
    ||||||||||| |||| |||| |||||||||||| ||||||||||| |||| | |||  |||| | |     |||| ||||||| |||||||||||||||    
T  42496461 ggatgaatttgaatgatttttgcactgaaccgcacggttcggttcgatttgtgatttatatcttaac-----aatcgaaccaaatcaaaccgcaagaata 42496555  T
Q  978 atgaatatta 987  Q
    ||||||||||    
T  42496556 atgaatatta 42496565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 968
Target Start/End: Original strand, 12659819 - 12659882
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    |||||||||||| ||||| |||||||||||  || | | |||||||| ||||||||||||||||    
T  12659819 aaccgcatggtttggttcagtttgcggtttctattttaccaaccgaaccaaaccaaaccaaacc 12659882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 910 - 968
Target Start/End: Complemental strand, 11219494 - 11219436
Alignment:
Q  910 catggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    ||||||| |||||||||||||||||  || | | |||||||| ||||||||||||||||    
T  11219494 catggtttggttcggtttgcggttttgattttaccaaccgaaccaaaccaaaccaaacc 11219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 2e-86; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 868 - 1102
Target Start/End: Original strand, 6003944 - 6004178
Alignment:
Q  868 cacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaac 967  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  6003944 cacttggttcggatgaattcggatgacttttgcactgaaccgcgaggtttggttcggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaac 6004043  T
Q  968 cgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggt 1067  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  6004044 cgcaagaataatgaatgttacttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggt 6004143  T
Q  1068 tcaattctaatttcttaccatctatttcaattcat 1102  Q
    |||||||||||| ||| |||||| ||| |||||||    
T  6004144 tcaattctaattcctttccatctcttttaattcat 6004178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 21586402 - 21586631
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||      ||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  21586402 gcacttggttcggatgaatttggatgacttttgcactaaaccgc-----gcggttcggtttgcagtttgcatctcagcaaccgaaccaaacc-aaccaaa 21586495  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
     ||||||||||||||||||||| |||||||||||||||| |||||||||    ||||||||| ||||| |||||||||||| ||||||| |||||| |||    
T  21586496 tcgcaagaataatgaatattacttaaacatgtactagccaaattacatagttcaagaataatatctttcgattcgatttttccattgttgcaccatgagg 21586595  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  21586596 ttcgattctaattcctttccatctctttcaattcat 21586631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 35531712 - 35531942
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||||||  | |||||||| |||||||||||| ||||| ||||| ||||| |||||||||||||||||||||     ||||||||||    
T  35531712 gcacttggttcggatgaattcaggtgacttttgcactgaaccgcacggttcagttcgatttgcagtttgcatctcagcaaccgaa-----ccaaaccaaa 35531806  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| |  ||||||||||  |||| ||||||||||| ||||||| |||||||| |    
T  35531807 ccgcaagaataatgaatattacttaaacatgtactagcccaattgcatagctcaagaataatcgttttttattcgatttttccattgttgcaccatcatg 35531906  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  35531907 ttcgattctaattcctttccatctctttcaattcat 35531942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 888 - 1102
Target Start/End: Complemental strand, 32880813 - 32880604
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatatta 987  Q
    ||||||||||| |||||||||||   |||||||| ||||| |||||||||||||||||||||||     ||||||||||||||||||| |||||||||||    
T  32880813 ggatgacttttgcactgaaccgcgcagttcggtttggtttacggtttgcatctcagcaaccgaa-----ccaaaccaaaccgcaagaaaaatgaatatta 32880719  T
Q  988 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttacca 1087  Q
    | |||||||||||||| ||||||||||| |  |||  |||||||||| |||| ||||||| ||||||| ||||||||||||  ||||||||| ||| |||    
T  32880718 cttaaacatgtactagtccaattacatagctcaagtttaatctctttcgatttgatttttccattgttgcaccatcaggtttgattctaattcctttcca 32880619  T
Q  1088 tctatttcaattcat 1102  Q
    ||| |||||||||||    
T  32880618 tctctttcaattcat 32880604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 867 - 1012
Target Start/End: Original strand, 48032691 - 48032836
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||||||  |||||||| ||||||||||| || ||||||||  ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  48032691 gcacttggttcagatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaaa 48032790  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattac 1012  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  48032791 ccgcaagaatcatgaatattacttaaacatgtactagcccaattac 48032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 959 - 1099
Target Start/End: Original strand, 50562223 - 50562363
Alignment:
Q  959 aaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttcca 1058  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||| |||||||||||| ||||||| ||    
T  50562223 aaaccaaaccccaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttccattgttgca 50562322  T
Q  1059 ccatcaggttcaattctaatttcttaccatctatttcaatt 1099  Q
    ||||||||||| ||||||||| ||| |||||| ||||||||    
T  50562323 ccatcaggttcgattctaattcctttccatctctttcaatt 50562363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 948 - 1099
Target Start/End: Complemental strand, 33002969 - 33002818
Alignment:
Q  948 cgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttt 1047  Q
    |||| ||||| |||||||||||||||||||||||||||| | |||| |||||| || ||||||||||| |  || |||||||||||||||||||||||||    
T  33002969 cgaaccaaactaaaccaaaccgcaagaataatgaatatttcttaaatatgtaccagtccaattacatagctcaataataatctcttttgattcgattttt 33002870  T
Q  1048 tcattgttccaccatcaggttcaattctaatttcttaccatctatttcaatt 1099  Q
     ||||||| ||||||||||||| ||||||| | ||| |||||| ||||||||    
T  33002869 ccattgttgcaccatcaggttcgattctaactcctttccatctctttcaatt 33002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 10369720 - 10369610
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10369720 gcacttggttcggatgaattcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 10369621  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  10369620 ccgcaaaaata 10369610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 960 - 1102
Target Start/End: Complemental strand, 39098378 - 39098236
Alignment:
Q  960 aaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccac 1059  Q
    |||| |||||||||||||||||||||||| ||||||||||||| | |||||| ||| |  ||||||||||| |||||| ||||||||||||||||| |||    
T  39098378 aaccgaaccgcaagaataatgaatattacttaaacatgtactaacacaattaaatagctcaagaataatcttttttgaatcgattttttcattgttgcac 39098279  T
Q  1060 catcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||| |  ||||||||||||| |||||| |||||||||||    
T  39098278 catcaggattgattctaatttctttccatctctttcaattcat 39098236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 917 - 1105
Target Start/End: Complemental strand, 43030895 - 43030721
Alignment:
Q  917 cggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaacc-aaaccgcaagaataatgaatattacctaaacatgtactagcccaattacata 1015  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||               |||||||| |||||||||    
T  43030895 cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaaccgcaagaataatgaa---------------tactagccaaattacata 43030811  T
Q  1016 acctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcatctc 1105  Q
     |  ||||||||||| ||| |||||||||||| ||||||| |||||||| |||| ||||||||| ||| |||||| ||||||||||||||    
T  43030810 gctcaagaataatctttttcgattcgatttttccattgttgcaccatcaagttcgattctaattcctttccatctctttcaattcatctc 43030721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 35401784 - 35401894
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  35401784 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaa 35401883  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  35401884 ccgcaaaaata 35401894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 51149282 - 51149392
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  51149282 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttacggtttgcatctcagcaacctaaccaaaccaaaccaaa 51149381  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  51149382 ccgcaaaaata 51149392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 4669207 - 4669317
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  |||||||||||||||||| ||||||||||||||||| || |||||||||| |||    
T  4669207 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaaccaaactaaa 4669306  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  4669307 ccgcaaaaata 4669317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 34795012 - 34794923
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaata 977  Q
    |||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  34795012 ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 34794923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 33361422 - 33361312
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||  |||| |||||||||||||||||||||||||||| | ||||||||||||    
T  33361422 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggtttagttcagtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaa 33361323  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  33361322 ccgcaaaaata 33361312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 867 - 979
Target Start/End: Original strand, 27641772 - 27641879
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||||||  |||||||||| ||||||||||| ||||| | || |||||||||||||||||||||| ||      |||||||||||||    
T  27641772 gcacttggttcggatgaattcagatgacttttgcactgaaccgcgtggtttgatttggtttgcggtttgcatctcagccac-----taaaccaaaccaaa 27641866  T
Q  967 ccgcaagaataat 979  Q
    |||||||||||||    
T  27641867 ccgcaagaataat 27641879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1020 - 1102
Target Start/End: Original strand, 27641871 - 27641953
Alignment:
Q  1020 aagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||| | ||||||| ||  |||||| |||||||||||    
T  27641871 aagaataatctcttttgattcgatttttccattgtagcaccatcaggttcgaatctaattcctctccatctctttcaattcat 27641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 42362768 - 42362835
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||||||||| |||| |||||||||||| ||| | | |||| ||||||||||||||||||||||||    
T  42362768 aaccgcatggtttggtttggtttgcggttttcattttaccaactgaatcaaaccaaaccaaaccgcaa 42362835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 871 - 972
Target Start/End: Complemental strand, 8355896 - 8355795
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||||| ||| |||| ||| | ||||  ||| |||| |||||||  ||||||||||| ||||  || | | |||||||||||||||||||||||||||    
T  8355896 ttggtttgaatgtatttagattatttttttactcaaccacatggtttagttcggtttgcagttttgattttatcaaccgaatcaaaccaaaccaaaccgc 8355797  T
Q  971 aa 972  Q
    ||    
T  8355796 aa 8355795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 38651589 - 38651656
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||||||||| | || |||||||||||| ||| | | |||| ||| ||||||||||||||||||||    
T  38651589 aaccgcatggtttgatttggtttgcggttttcattttaccaactgaaccaaaccaaaccaaaccgcaa 38651656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 46252994 - 46253061
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    ||||| |||||| |||||||||||||||||  || | |  ||||||| ||||||||||||||||||||    
T  46252994 aaccgtatggtttggttcggtttgcggttttaattttactaaccgaagcaaaccaaaccaaaccgcaa 46253061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 911 - 972
Target Start/End: Original strand, 2565856 - 2565917
Alignment:
Q  911 atggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||| |||||||||||||||||  || | | ||||| || ||||||||||||||||||||    
T  2565856 atggtttggttcggtttgcggttttgattttaccaaccaaaacaaaccaaaccaaaccgcaa 2565917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 871 - 968
Target Start/End: Original strand, 10481129 - 10481226
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    |||||||||||| |||||||| |||||   ||| ||||| |||||| | || | ||||||||||  || | | |||||||| ||||||||||||||||    
T  10481129 ttggtttggatgtatttggatcactttattactcaaccgtatggtttgatttgatttgcggtttttattttatcaaccgaaccaaaccaaaccaaacc 10481226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 3e-82; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 43429701 - 43429466
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43429701 gcacttggttcggatgaattcggatgacttttgcactaaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 43429602  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||||| |||||| ||||| |||||| | ||||||||||| |  ||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  43429601 ccgcaagaataatgactattacttaaacgtgtactcgtccaattacatagctcaagaaaaatctcttttgattcgatttttccattgttgcaccatcagg 43429502  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||||| ||| |||||| |||| ||||||    
T  43429501 ttcaattctaattcctttccatctctttcgattcat 43429466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 42910231 - 42910461
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||     ||||||||||    
T  42910231 gcacttggttcggatgaattcggatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaa-----ccaaaccaaa 42910325  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  42910326 ccgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcttttgatttgatttttccattgttgcaccatcagg 42910425  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    | | ||||||||| ||| |||||| |||||||||||    
T  42910426 tccgattctaattcctttccatctctttcaattcat 42910461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 24360845 - 24361078
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||||||||||||| ||||||||||| ||| ||||| ||  |||||||||||||  |||||||| |||||||||||||| ||||||||||||||    
T  24360845 gcacttggtttggatgaattcggatgacttttgcacagaaccacacagttcggttcggtt--cggtttgcgtctcagcaaccgaaccaaaccaaaccaaa 24360942  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||| |||||||| |    
T  24360943 ccgcaagaataatgactattacttaaatatgtactagcccaattacatagctcaagaataatcccttttgattcgattttttcattgttgcaccatcaag 24361042  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||||| ||| |||| | |||||||||||    
T  24361043 ttcaattctaattcctttccatttctttcaattcat 24361078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 32824119 - 32823894
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||          ||||||||    
T  32824119 gcacttggtttggatgaattcggatggcttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaacc----------aaaccaaa 32824030  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  32824029 ccgcatgaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcctttgattcgatttttccattgttgcaccatcagg 32823930  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| ||||||||||||||||||    
T  32823929 ttcgattctaattcctttccatctatttcaattcat 32823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 6e-71
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 13852839 - 13852606
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  13852839 gcacttggttcggatgaattcggatgacttttgcactgaaccgagtggttcggttctgtttgcggtttgcatctcagcaactgaaccaaaccaaaccaaa 13852740  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    | |||||||||||||||||||  |||| |||||||| | |||||||||| |  ||||||||||||||||||||||||||||||||||||  |||||||||    
T  13852739 ctgcaagaataatgaatattatttaaatatgtactaactcaattacatagctcaagaataatctcttttgattcgattttttcattgtt--accatcagg 13852642  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||| ||||| ||| |||||| |||||||||||    
T  13852641 ttcgattataattcctttccatctctttcaattcat 13852606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 36921106 - 36921338
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| |||| |||||| || |||||| |  ||||||||| ||||||| |||||||||||||||||||||     ||||||||||    
T  36921106 gcacttggttcggatgaattcggattacttttgcattgaaccacgcggttcggtttggtttgcagtttgcatctcagcaaccgaa-----ccaaaccaaa 36921200  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagccc--aattacataacctaagaataatctcttttgattcgattttttcattgttccaccatca 1064  Q
    |||||||||||||||||||||| ||||||||||||| |||  ||||||||| |  |||||||||| ||||||||||||||||||||||||| ||||||||    
T  36921201 ccgcaagaataatgaatattacttaaacatgtactaacccccaattacatagctcaagaataatcgcttttgattcgattttttcattgttgcaccatca 36921300  T
Q  1065 ggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||| |||||||||  || |||||| |||||||||||    
T  36921301 ggttcgattctaattcttttccatctctttcaattcat 36921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 867 - 1069
Target Start/End: Original strand, 27054277 - 27054480
Alignment:
Q  867 gcacttggttt-ggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaa 965  Q
    ||||||||||| |||||||||  |||||||||| |||| |||||   | || |||| |||||||||||||||| ||||||| |||| |||||||||||||    
T  27054277 gcacttggtttcggatgaattcagatgacttttgcactaaaccgtgcgatttggtttggtttgcggtttgcatatcagcaatcgaaccaaaccaaaccaa 27054376  T
Q  966 accgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcag 1065  Q
    ||| ||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||     
T  27054377 accacaagaataatgaatattacttaaatatgtactagcccaattacataactcaagaataatctcttttgattcgattttttcattgttgcaccatcat 27054476  T
Q  1066 gttc 1069  Q
    ||||    
T  27054477 gttc 27054480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 868 - 1102
Target Start/End: Original strand, 31876197 - 31876426
Alignment:
Q  868 cacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaac 967  Q
    |||||| || ||||||||| ||||||||||| || |||||||   |||||| || ||||||||||||||||||||||||||     ||||||||||||||    
T  31876197 cacttgattcggatgaattcggatgacttttgcaatgaaccgtgcggttcgatttggtttgcggtttgcatctcagcaacc-----aaaccaaaccaaac 31876291  T
Q  968 cgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggt 1067  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||| |  |||||||||||||||| ||||||||||| ||||||| ||||||||| |    
T  31876292 cgcaaaaataatgaatattacttaaacatgtactagcccagttacatagctcaagaataatctcttttaattcgatttttccattgttgcaccatcagat 31876391  T
Q  1068 tcaattctaatttcttaccatctatttcaattcat 1102  Q
    || |||||||||  || |||||| ||| |||||||    
T  31876392 tcgattctaattcttttccatctcttttaattcat 31876426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 10070086 - 10069861
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||  |||| |||||||||||| |||||||||||||||||          ||||||||    
T  10070086 gcacttggttcggatgaattcggatgacttttgcactgaaccgcacagttcagttcggtttgcgatttgcatctcagcaacc----------aaaccaaa 10069997  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||| |||||||| ||||| |||||  ||||||||||||| || ||||||||||| |||||||| ||||||| ||||||| ||||||||||    
T  10069996 ccgcaagaataatcaatattacttaaacttgtaccggcccaattacatagcccaagaataatcttttttgatttgatttttccattgttgcaccatcagg 10069897  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||  ||||||||| ||| ||||||  ||||||||||    
T  10069896 tttgattctaattcctttccatctccttcaattcat 10069861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 22366973 - 22366748
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||||||  |||||||| ||||||||||| |||| |||||   | || ||||||||||||||||||||||| |||||||          ||||||||    
T  22366973 gcacttggttcagatgaattcggatgacttttgcactaaaccgtgcgatttggttcggtttgcggtttgcatcttagcaacc----------aaaccaaa 22366884  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| |  |||||||||||||||  ||||| ||||| ||||||| ||||||||||    
T  22366883 ccgcaagaataatgaatattactcaaacatgtactagcccaattacatagctcaagaataatctctttcaattcggtttttccattgttgcaccatcagg 22366784  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  22366783 ttcgattctaattcctttccatctctttcaattcat 22366748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 879 - 1063
Target Start/End: Original strand, 18672782 - 18672966
Alignment:
Q  879 gatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataa 978  Q
    |||||||| |||||| |||| || || |||||   ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  18672782 gatgaattcggatgatttttgcattggaccgcgcagttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaataataa 18672881  T
Q  979 tgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatc 1063  Q
    | |||||||| ||||| |||||||||||||||||||| |  | |||||||||||||||||| |||||||  |||||| |||||||    
T  18672882 tcaatattacttaaacttgtactagcccaattacatagcacaggaataatctcttttgattagatttttctattgttgcaccatc 18672966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 47903752 - 47903532
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||   ||||| |||||||||||||||||||||||||||||||| |||| ||| |||||    
T  47903752 gcacttggttcggatgaattcggatgacttttgcactgaaccgcgcagttcgtttcggtttgcggtttgcatctcagcaaccgaaccaaaacaacccaaa 47903653  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    || |||||||||||||               |||||||| ||||||||| |  ||||||| | | ||| |||||||||||||||||||| ||||||||||    
T  47903652 ccacaagaataatgaa---------------tactagccaaattacatagctcaagaatactatttttcgattcgattttttcattgttgcaccatcagg 47903568  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||| |||||  || |||| | |||||||||||    
T  47903567 ttcgattataattcatttccatatctttcaattcat 47903532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 3211756 - 3211866
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3211756 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 3211855  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  3211856 ccgcaaaaata 3211866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 1079
Target Start/End: Complemental strand, 5933151 - 5932945
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttc-----ggtttgcggtttgcatctcagcaaccgaatcaaaccaaa 961  Q
    |||||||||| |||| ||||  |||||||||| |||||||||||  ||||||||||     ||||||||||||| ||||||||||||||| |||||||||    
T  5933151 gcacttggttcggataaattcagatgacttttgcactgaaccgcgcggttcggttcggttcggtttgcggtttgtatctcagcaaccgaaccaaaccaaa 5933052  T
Q  962 ccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccacca 1061  Q
    ||||| || ||||||||||      || |||||||||||||||||||||||||| |  |||||||||||||     |||||||||| ||||||| |||||    
T  5933051 ccaaatcgtaagaataatg------acttaaacatgtactagcccaattacatagctcaagaataatctct-----ttcgatttttccattgttgcacca 5932963  T
Q  1062 tcaggttcaattctaatt 1079  Q
    |||| ||  |||||||||    
T  5932962 tcagatttgattctaatt 5932945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 47070137 - 47070027
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47070137 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 47070038  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  47070037 ccgcaaaaata 47070027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 867 - 1079
Target Start/End: Original strand, 31982221 - 31982423
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||| || |||||||||  |||||||||| |||||||| ||  |||| |||| | |||||||||||||||| |||||||          ||||||||    
T  31982221 gcacttgattcggatgaattcagatgacttttgcactgaactgcgcggtttggtttgatttgcggtttgcatcttagcaacc----------aaaccaaa 31982310  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||| |||||| |||||||| ||||  ||||| |||||||||||||| || |||||||||||||||||||| ||||||| ||||||| ||||||||      
T  31982311 ccgcaaaaataatcaatattacttaaatttgtaccagcccaattacatagcccaagaataatctcttttgatttgatttttccattgttgcaccatcaaa 31982410  T
Q  1067 ttcaattctaatt 1079  Q
    ||| |||||||||    
T  31982411 ttcgattctaatt 31982423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 10672288 - 10672178
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10672288 gcacttggttcggatgagttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 10672189  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  10672188 ccgcaaaaata 10672178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 889 - 977
Target Start/End: Original strand, 47204093 - 47204181
Alignment:
Q  889 gatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaata 977  Q
    ||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  47204093 gatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 47204181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 868 - 977
Target Start/End: Complemental strand, 12118068 - 12117959
Alignment:
Q  868 cacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaac 967  Q
    ||||||||| |||||| || |||||||||||  ||||||||||  |||||||||||||||||| ||||||||||||||||| || |||||||||| ||||    
T  12118068 cacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaaccaaactaaac 12117969  T
Q  968 cgcaagaata 977  Q
    ||||| ||||    
T  12117968 cgcaaaaata 12117959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 867 - 963
Target Start/End: Original strand, 8768280 - 8768376
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaacc 963  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  8768280 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaaacc 8768376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 867 - 958
Target Start/End: Original strand, 11205992 - 11206083
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaacc 958  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11205992 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaacc 11206083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 941 - 1102
Target Start/End: Complemental strand, 48675571 - 48675410
Alignment:
Q  941 cagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattc 1040  Q
    ||||||| ||| ||||| ||| ||||||| ||||||||| |||||||| |||||||||| ||||| ||||||||| |  || ||||| |||||||| ||     
T  48675571 cagcaactgaaccaaacaaaatcaaaccgtaagaataataaatattacttaaacatgtattagcctaattacatagctaaaaaataacctcttttggttt 48675472  T
Q  1041 gattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    |||| || ||||||| ||||||||||||  |||||||||  || |||||| ||| |||||||    
T  48675471 gattattccattgttgcaccatcaggtttgattctaattcatttccatctctttgaattcat 48675410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 871 - 972
Target Start/End: Original strand, 524383 - 524484
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||||||||| ||| |||| ||||||   || |||||||||||| |||| |||||||||||| ||| | | |||||||| ||||||||||||||||||    
T  524383 ttggtttggatgtattcggatcacttttttgctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgc 524482  T
Q  971 aa 972  Q
    ||    
T  524483 aa 524484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 875 - 972
Target Start/End: Complemental strand, 40849422 - 40849325
Alignment:
Q  875 tttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||||| ||| |||| ||||||  ||| |||||||||||| |||| |||||||||||| ||| | | |||||||| ||||||||||||||||||||    
T  40849422 tttggatgtattcggatcacttttttactcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaa 40849325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 871 - 972
Target Start/End: Complemental strand, 29628781 - 29628680
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||||||||| ||| |||| ||||||   || |||||||||||| |||| |||||||| ||| ||| | | |||||||| ||||||||||||||||||    
T  29628781 ttggtttggatgtattcggatcacttttttccttaaccgcatggtttggtttggtttgcgattttcattttaccaaccgaaccaaaccaaaccaaaccgc 29628682  T
Q  971 aa 972  Q
    ||    
T  29628681 aa 29628680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 31287326 - 31287393
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||||||||| |||||||||||||||||  || | | |||||||| ||||||||| ||||||||||    
T  31287326 aaccgcatggtttggttcggtttgcggttttaattttaccaaccgaaccaaaccaaatcaaaccgcaa 31287393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 960 - 1015
Target Start/End: Complemental strand, 36509086 - 36509031
Alignment:
Q  960 aaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacata 1015  Q
    |||||||||||||||||||| |||||||| ||||  ||||| ||||||||||||||    
T  36509086 aaccaaaccgcaagaataatcaatattacttaaatttgtacgagcccaattacata 36509031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 918 - 972
Target Start/End: Original strand, 30079153 - 30079207
Alignment:
Q  918 ggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||| |||||||||||| ||  | |||||||||| ||||||||||||||||||||    
T  30079153 ggtttggtttgcggttttcagtttagcaaccgaaccaaaccaaaccaaaccgcaa 30079207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 3e-82; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 12680625 - 12680860
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||||||  |||||||| ||||||||||| || ||||||||  |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  12680625 gcacttggttcagatgaattcggatgacttttgcaatgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 12680724  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  12680725 ccgcaagaatgatgaatattacttaaacatgtactagcccaattacataacttaaaaataatctcttttgattcgatttttccattgttgcaccatcagg 12680824  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  12680825 ttcgattctaattcctttccatctctttcaattcat 12680860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 2226433 - 2226668
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| |||| ||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2226433 gcacttggttcggatgaattcggatgacttttgcacttaaccgcgcggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 2226532  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||| |  | |||||||||||||||||||||||||| ||||||| ||||||||||    
T  2226533 ccgccagaataatgaatattacttaaacatgtattagcccaattacatagctcatgaataatctcttttgattcgatttttccattgttgcaccatcagg 2226632  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  2226633 ttcgattctaattcctttccatctctttcaattcat 2226668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 867 - 1079
Target Start/End: Original strand, 12165493 - 12165705
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||    
T  12165493 gcacttggttcggatgaattcggatgacttttgcactgaaccgcatggttcggttcggtttgcagtttgcatctcagcaactgaaccaaacgaaaccaaa 12165592  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||| |||||||| ||| ||||||| ||||||||||    
T  12165593 ccgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatctttccattgttgcaccatcagg 12165692  T
Q  1067 ttcaattctaatt 1079  Q
    ||||||| |||||    
T  12165693 ttcaattttaatt 12165705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 6e-71
Query Start/End: Original strand, 867 - 1079
Target Start/End: Complemental strand, 38434218 - 38434006
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||||||| |||||||||||||||||||| ||||||||||   ||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||    
T  38434218 gcacttggtttagatgaatttggatgacttttgcactgaaccgtgaggttcggtttgatttgcggtttgtatctcagcaaccgaaccaaaccaaaccaaa 38434119  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| |||||||| |    
T  38434118 ccgcaagaataagaaatattacttaaacttgtactagcccaattacatagcctaagaataatctcttttaattcgatttttccattgttgcaccatcacg 38434019  T
Q  1067 ttcaattctaatt 1079  Q
    ||| |||||||||    
T  38434018 ttcgattctaatt 38434006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 32520775 - 32521005
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||  ||||||||| |||||||| | ||||||||||||||||||     ||||||||||    
T  32520775 gcacttggttcggatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcgatctgcatctcagcaaccgaa-----ccaaaccaaa 32520869  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32520870 ccgcaagaatgatgaatattacttaaagatgtactagcccaattacataatttaagaataatctcttttgattcgattttttcattgttgcaccatcagg 32520969  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| |||||| ||  || |||||| |||||||||||    
T  32520970 ttcgattctagttcatttccatctctttcaattcat 32521005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 868 - 1102
Target Start/End: Original strand, 36103162 - 36103396
Alignment:
Q  868 cacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaac 967  Q
    ||||||||| |||||||||  |||||||||| |||||||||||  |||||| || ||||||  ||||||||||||||||||||| |||||||||||||||    
T  36103162 cacttggttcggatgaattcagatgacttttgcactgaaccgcgcggttcgttttggtttgtagtttgcatctcagcaaccgaaccaaaccaaaccaaac 36103261  T
Q  968 cgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggt 1067  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||| |  ||||||||||  |||||||||||||||| ||||||| |||||||| ||    
T  36103262 cgcaagaataatgaatattacttgaacatgtactagcccaactacatagctcaagaataatcgtttttgattcgatttttccattgttgcaccatcaagt 36103361  T
Q  1068 tcaattctaatttcttaccatctatttcaattcat 1102  Q
    || ||||||||| ||| |||||| |||||||||||    
T  36103362 tcgattctaattcctttccatctctttcaattcat 36103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 869 - 1102
Target Start/End: Complemental strand, 9161511 - 9161280
Alignment:
Q  869 acttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    |||||||| |||||||||  |||||||||| ||||||||||   ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  9161511 acttggttcggatgaattcagatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgaatctcagcaaccgaaccaaaccaaacccaacc 9161412  T
Q  969 gcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggtt 1068  Q
    |||||||||||||||||||| |||| ||| ||||||||||  ||||| |  |  ||||||||||||||||||||||||| ||||||| |||||||| |||    
T  9161411 gcaagaataatgaatattacttaaatatgcactagcccaa--acatagctcagaaataatctcttttgattcgatttttccattgttgcaccatcaagtt 9161314  T
Q  1069 caattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||| ||| |||||| ||| |||||||    
T  9161313 caattctaattcctttccatctctttgaattcat 9161280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 867 - 1044
Target Start/End: Original strand, 36176439 - 36176616
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| | ||||||| ||||||||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||||    
T  36176439 gcacttggttcgaatgaattcggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaa 36176538  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgatt 1044  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||| |  ||||| |||||||||||||||||||    
T  36176539 ccgcaagaataatgactattacttaaacgtgtactagcccaattacatagctcaagaaaaatctcttttgattcgatt 36176616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 867 - 1079
Target Start/End: Complemental strand, 10174587 - 10174383
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||| || ||||||||| ||||||||||| |||||||||||  |||| | |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  10174587 gcacttgattcggatgaattcggatgacttttgcactgaaccgcgcggtttg-ttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 10174489  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||    |||||||||||| ||||||||||||| ||||||||||||||  |||   |||||||||||||||||||||||||||||| ||||||||||    
T  10174488 ccgcaa----aatgaatattacttaaacatgtactatcccaattacataactcaag---aatctcttttgattcgattttttcattgttgcaccatcagg 10174396  T
Q  1067 ttcaattctaatt 1079  Q
    ||| ||| |||||    
T  10174395 ttcgattataatt 10174383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 892 - 1102
Target Start/End: Original strand, 332856 - 333068
Alignment:
Q  892 gacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattaccta 991  Q
    ||||||| |||||||||||   |||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||    
T  332856 gacttttgcactgaaccgcgcagttcggtttggtttgcggtttgcatctcagcatccgaaccaaaccaaactaaaccgcaagaataatgaatattactta 332955  T
Q  992 aacatgtactagcccaattacata-acct-aagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatc 1089  Q
    |||||||||| ||||||||||||| | || ||||||||||| |||||||||||||||| |||  || |||||||| |||| ||||||||| ||| | |||    
T  332956 aacatgtactggcccaattacatatagctcaagaataatctattttgattcgatttttccataattgcaccatcaagttcgattctaattcctttctatc 333055  T
Q  1090 tatttcaattcat 1102  Q
    | |||||||||||    
T  333056 tctttcaattcat 333068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 867 - 1015
Target Start/End: Original strand, 36176670 - 36176818
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| | ||||||| ||||||||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||||    
T  36176670 gcacttggttcgaatgaattcggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaa 36176769  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacata 1015  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  36176770 ccgcaagaataatgactattacttaaacgtgtactagcccaattacata 36176818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 30265348 - 30265577
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||| || |||||||||  |||||||||| |||| ||||| |     ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  30265348 gcacttgattcggatgaattcagatgacttttgcactaaaccgta-----cggttcggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaa 30265442  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
     ||||||||||||||||||||| ||| ||||| |||||||||||||||| |  || ||||| | ||||  ||||||||||| ||||||| |||||||| |    
T  30265443 tcgcaagaataatgaatattacttaatcatgtgctagcccaattacatagctcaaaaataa-cgctttcaattcgatttttccattgttgcaccatcaag 30265541  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| |||||||||  || |||||| |||||||||||    
T  30265542 ttcgattctaattattttccatctctttcaattcat 30265577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 701676 - 701566
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| ||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  701676 gcacttggttcggatgagtttggatgacttttagactaaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 701577  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  701576 ccgcaaaaata 701566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 666882 - 666992
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  666882 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 666981  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  666982 ccgcaaaaata 666992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 11917914 - 11917804
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||||||||||||| || |||||||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11917914 gcacttggtttggatgagttcggatgacttttagactaaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 11917815  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  11917814 ccgcaaaaata 11917804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 27885697 - 27885807
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27885697 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 27885796  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  27885797 ccgcaaaaata 27885807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 8409445 - 8409335
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  |||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8409445 gcacttggttcggatgagttcggatgacttttagactgaatcgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 8409346  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  8409345 ccgcaaaaata 8409335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 38334365 - 38334475
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  38334365 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaactaaaccaaa 38334464  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  38334465 ccgcaaaaata 38334475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 15068935 - 15068825
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  |||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  15068935 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaaa 15068836  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  15068835 ccgcaaaaata 15068825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 30002457 - 30002347
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||| ||||  ||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  30002457 gcacttggttcggatgagttcggatgatttttagactgaaccgcgcggttcggttcggtttgcggtttacatctcagcaaccgaaccaaaccaaaccaaa 30002358  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  30002357 ccgcaaaaata 30002347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 955 - 1069
Target Start/End: Original strand, 17084513 - 17084627
Alignment:
Q  955 aaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgt 1054  Q
    |||| |||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||| | || |||||||| |||||||||||||||| |||| |    
T  17084513 aaccgaaccaaaccgcaagaataatcaatattacttaaacttgtactaacccaattacataatccaaaaataatctattttgattcgatttttccattat 17084612  T
Q  1055 tccaccatcaggttc 1069  Q
    | |||||||| ||||    
T  17084613 tgcaccatcaagttc 17084627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 981 - 1102
Target Start/End: Complemental strand, 35893405 - 35893283
Alignment:
Q  981 aatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaattt 1080  Q
    |||||||| |||||||||||||||||||||||||| |  ||||||||||||||| |||| ||||||||||||||| |||||||| | || |||||||||     
T  35893405 aatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgatttgattttttcattgttgcaccatcacgctcgattctaattc 35893306  T
Q  1081 c-ttaccatctatttcaattcat 1102  Q
    | || |||||| |||||||||||    
T  35893305 cttttccatctttttcaattcat 35893283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 867 - 959
Target Start/End: Complemental strand, 42545914 - 42545822
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaacca 959  Q
    |||||||||| |||||||||  |||||||||| |||| ||||||  |||||||||||||||||||||||||||||| |||||||| |||||||    
T  42545914 gcacttggttcggatgaattcagatgacttttgcactaaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccgaaccaaacca 42545822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 917 - 1102
Target Start/End: Complemental strand, 23781192 - 23781026
Alignment:
Q  917 cggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataa 1016  Q
    ||||||||||  ||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||                 ||||||||| ||     
T  23781192 cggttcggtt--cggtttgcatctcagcaactgaaccaagccaaaccaaaccgcaaaaataatgaatatt-----------------cccaattacttag 23781112  T
Q  1017 cctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    |  |||||||||||||||||||| ||||||| |||||||  |||||| ||||| ||||||||| ||| |||||| |||||||||||    
T  23781111 ctcaagaataatctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcat 23781026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 917 - 1102
Target Start/End: Complemental strand, 23868145 - 23867979
Alignment:
Q  917 cggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataa 1016  Q
    ||||||||||  ||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||                 ||||||||| ||     
T  23868145 cggttcggtt--cggtttgcatctcagcaactgaaccaagccaaaccaaaccgcaaaaataatgaatatt-----------------cccaattacttag 23868065  T
Q  1017 cctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    |  |||||||||||||||||||| ||||||| |||||||  |||||| ||||| ||||||||| ||| |||||| |||||||||||    
T  23868064 ctcaagaataatctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcat 23867979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 969 - 1062
Target Start/End: Complemental strand, 42545086 - 42544993
Alignment:
Q  969 gcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccat 1062  Q
    |||||||||||||||||||| |||| ||||| ||||||||| ||||| |  |||||||||||  |||||||| | || ||||||||| ||||||    
T  42545086 gcaagaataatgaatattacttaaatatgtaatagcccaataacatagctcaagaataatctaatttgattcaacttgttcattgttgcaccat 42544993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 874 - 972
Target Start/End: Complemental strand, 23623567 - 23623469
Alignment:
Q  874 gtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    ||||||| | ||| |||| ||||||  ||| |||||||||||| |||| |||||||||||| ||| | |  ||||||| ||||||||||||||||||||    
T  23623567 gtttggaagtattcggatcacttttttactcaaccgcatggtttggtttggtttgcggttttcatttgacaaaccgaaccaaaccaaaccaaaccgcaa 23623469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 691159 - 691226
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||||||||| |||| | |||||||||| ||| | | |||||||| ||||||||||||||||||||    
T  691159 aaccgcatggtttggtttgatttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaa 691226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1020 - 1102
Target Start/End: Original strand, 9988592 - 9988674
Alignment:
Q  1020 aagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||||| ||| ||| ||||| |||  |||||  ||||||||||    
T  9988592 aagaacaatctcttttgattcaattttttcattcttgcaccatcagattcgattttaattccttttcatctccttcaattcat 9988674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 867 - 979
Target Start/End: Complemental strand, 35893547 - 35893442
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| |||||||||||  |||||| |||  ||| ||||||| |||||       |||||| ||| | | |||||||||||||||    
T  35893547 gcacttggttcggatgaattcggatgacttttgtactgaatcgcgcggtccggttcgatttgc-------atctcaacaatcaagtcaaaccaaaccaaa 35893455  T
Q  967 ccgcaagaataat 979  Q
    |||||||||||||    
T  35893454 ccgcaagaataat 35893442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 874 - 963
Target Start/End: Complemental strand, 2423368 - 2423279
Alignment:
Q  874 gtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaacc 963  Q
    ||||||||| |||| ||| |||||| | || |||| ||||||| |||| | |||||||||| ||| | | |||||||| |||||||||||    
T  2423368 gtttggatgtattttgatcactttttccctcaaccacatggtttggtttgatttgcggttttcattttaccaaccgaaccaaaccaaacc 2423279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1057 - 1102
Target Start/End: Original strand, 36176840 - 36176885
Alignment:
Q  1057 caccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||||||||||||||| ||| |||||| |||| ||||||    
T  36176840 caccatcaggttcaattctaattcctttccatctctttcgattcat 36176885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 3e-82; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 33910326 - 33910561
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| || | || ||||||||||||||    
T  33910326 gcacttggttcggatgaatttggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagtaatcaaaccaaaccaaaccaaa 33910425  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||||||||||    
T  33910426 ccgcaagaataatgaatattacttaaatatgtactagcccaattacataacttaagaataatctcttttgattcgatttttccaatgttgcaccatcagg 33910525  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| |||||||||  || |||||| |||||||||||    
T  33910526 ttcgattctaattcttttccatctctttcaattcat 33910561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 869 - 1102
Target Start/End: Original strand, 39256187 - 39256420
Alignment:
Q  869 acttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    |||||||| ||||||||||||||||||||| |||||||| ||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39256187 acttggttcggatgaatttggatgacttttgcactgaactgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaacc 39256286  T
Q  969 gcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggtt 1068  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| |  | ||||||||| ||| |||||||||||| ||||||| ||||||||||||    
T  39256287 gcaagaataatgaatattacttaaacatgtactagccaaattacatagctcacgaataatctttttcgattcgatttttccattgttgcaccatcaggtt 39256386  T
Q  1069 caattctaatttcttaccatctatttcaattcat 1102  Q
    | ||||||||| ||| |||||| |||||||||||    
T  39256387 cgattctaattcctttccatctctttcaattcat 39256420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 45692324 - 45692094
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||     ||||| ||||    
T  45692324 gcacttggttcggatgaatttggatgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaa-----ccaaaacaaa 45692230  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||| |||||||| |||| ||||||||| |||||||||||||  ||||||||||||||||||||| |||||||||||||| |||||| |||    
T  45692229 ccgcaagaataataaatattacttaaatatgtactagtccaattacataactcaagaataatctcttttgattcaattttttcattgttgcaccattagg 45692130  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  45692129 ttcgattctaattcctttccatctctttcaattcat 45692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 24910603 - 24910838
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| || |||||||    ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||    
T  24910603 gcacttggttcggatgaattcggatgacttttgcattgaaccgtgcagttcggttcagtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaa 24910702  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||  |||||| ||||||||||    
T  24910703 ccggaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttcaattgttgcaccatcagg 24910802  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||||||| |||||| | |||||||||    
T  24910803 ttcgattctaatttctttccatctctctcaattcat 24910838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 16529041 - 16529276
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| | ||||||| ||||| ||||| |||||||| ||   ||||||||  || |||||||||||||||||||||| || ||||||||||||||    
T  16529041 gcacttggttcgtatgaattcggatggcttttgcactgaacagcgcagttcggtttagtatgcggtttgcatctcagcaaccaaaccaaaccaaaccaaa 16529140  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  16529141 ccgcaagaatagtgaatattacttaaacatgtaatagcccaattacatagcccaagaataatctcttttgattcgaatttttcattgttgcaccatcagg 16529240  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  16529241 ttcgattctaattcctttccatctctttcaattcat 16529276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 888 - 1102
Target Start/End: Complemental strand, 33474953 - 33474739
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatatta 987  Q
    ||||||||||| |||||||||||  |||||||||||||||| | ||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||    
T  33474953 ggatgacttttgcactgaaccgcgcggttcggttcggtttgtgatttgcatctcatcaaccgaaccaaaccaaaccaaactgcaagaataacgaatatta 33474854  T
Q  988 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttacca 1087  Q
    | |||| ||||||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||| |  |||||||||| ||||||||| ||| |||    
T  33474853 cttaaatatgtactagcccaattacatagctcaagaataatctcttttgatttgattttttcattgttgcgtcatcaggttcgattctaattcctttcca 33474754  T
Q  1088 tctatttcaattcat 1102  Q
    ||| |||||||||||    
T  33474753 tctctttcaattcat 33474739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 888 - 1102
Target Start/End: Complemental strand, 32954586 - 32954377
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatatta 987  Q
    ||||||||||| |||| ||||||| ||||| |||||||| |||||||||||||||||||||||| |||||||||||| |     ||||||||||||||||    
T  32954586 ggatgacttttgcactaaaccgcacggttccgttcggttcgcggtttgcatctcagcaaccgaaccaaaccaaaccata-----agaataatgaatatta 32954492  T
Q  988 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttacca 1087  Q
    | ||||||||||| |||||||||||||| |  ||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||| |||    
T  32954491 cttaaacatgtacaagcccaattacatagctcaagaataatttctttcgattcgatttttccattgttgcaccatcaggttcaattctaattactttcca 32954392  T
Q  1088 tctatttcaattcat 1102  Q
     || |||||||||||    
T  32954391 actctttcaattcat 32954377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 871 - 1102
Target Start/End: Original strand, 51251984 - 51252205
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||| ||||||||| ||||||||||| || ||||||||   |||||||| ||||||||||||||||||||||||||          ||||||| ||||    
T  51251984 ttggttcggatgaattcggatgacttttgcaatgaaccgcgcagttcggtttggtttgcggtttgcatctcagcaacc----------aaaccaacccgc 51252073  T
Q  971 aagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttca 1070  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| || || ||||||||||||||||||||||||| ||||||| ||||||||  |||     
T  51252074 aagaataatgaatattacttaaacatgtactagcctaattacatagccaaataataatctcttttgattcgatttttccattgttgcaccatcaaattcg 51252173  T
Q  1071 attctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||| ||| |||||| |||||||||||    
T  51252174 attctaattcctttccatctctttcaattcat 51252205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 925 - 1069
Target Start/End: Complemental strand, 11899514 - 11899370
Alignment:
Q  925 tttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaa 1024  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||| |  |||||    
T  11899514 tttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaa 11899415  T
Q  1025 taatctcttttgattcgattttttcattgttccaccatcaggttc 1069  Q
    |||||| |||||||| ||||||| ||||||| |||||||| ||||    
T  11899414 taatcttttttgatttgatttttccattgttgcaccatcatgttc 11899370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 1160583 - 1160802
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||||||  ||||||||  |||||||||| |||||||||||| | ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||    
T  1160583 gcacttggttcagatgaattcagatgacttttgcactgaaccgcacgattcggttcgatttgcggtt-gcatctcagcaaccgaaccaaaccaaaccaaa 1160681  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||||||               |||||||| ||||||||| |  ||||||||||| ||| ||||| |||||| ||||||| || |||||||    
T  1160682 ccgcaagaataatgaa---------------tactagccaaattacatagctcaagaataatctttttcgattcaatttttccattgttgcaacatcagg 1160766  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    | | ||||||||| ||| |||||| |||||||||||    
T  1160767 tacgattctaattcctttccatctctttcaattcat 1160802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 44919059 - 44918839
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||| |||||||||||| |||| |||||| |||||||| ||  |||| |||| ||||||||||||||||||| ||||||               | |    
T  44919059 gcacttgatttggatgaattcggataacttttgcactgaactgcgcggtttggtttggtttgcggtttgcatctctgcaacc---------------aga 44918975  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||| |||||||| ||||||| ||||||| | |||||| |    
T  44918974 ccgcaagaataatgaatattacttaaacatgtactagtccaattacatagctcaagaataatcttttttgatttgatttttccattgttgctccatcaag 44918875  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| |||||||||  || |||||| |||| ||||||    
T  44918874 ttcgattctaattcttttccatctctttcgattcat 44918839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 5154968 - 5155057
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaata 977  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  5154968 ggatgacttttagactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 5155057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 8211728 - 8211639
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaata 977  Q
    |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  8211728 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 8211639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 879 - 1030
Target Start/End: Original strand, 6722384 - 6722529
Alignment:
Q  879 gatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataa 978  Q
    |||||||||||||||||||| || |||||     |||||| |||| |||||||||||||||||||||||||     ||||||||||||||||||| ||||    
T  6722384 gatgaatttggatgacttttgcattgaactttgcggttcgattcgatttgcggtttgcatctcagcaaccg-----aaccaaaccaaaccgcaag-ataa 6722477  T
Q  979 tgaatattacctaaacatgtactagcccaattacataacctaagaataatct 1030  Q
    |||||||||| ||||||||||||  |||||||||||| |  |||||||||||    
T  6722478 tgaatattacttaaacatgtactgacccaattacatagctcaagaataatct 6722529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 29707696 - 29707801
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  |||||||||||     ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29707696 gcacttggttcggatgagttcggatgacttttagactgaaccgca-----cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 29707790  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  29707791 ccgcaaaaata 29707801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 20494183 - 20494094
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaata 977  Q
    |||||||||||  ||||||||||  ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  20494183 ggatgacttttagactgaaccgcgcggttcggttcgatttgctgtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 20494094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 1007 - 1102
Target Start/End: Complemental strand, 29389425 - 29389330
Alignment:
Q  1007 aattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||| |||  |||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||| ||  |||||| |||||| ||||    
T  29389425 aattacacaactcaagaataatctcttttaattcgatttttccattgttgcaccatcaggttcgattctaattcctctccatctctttcaactcat 29389330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 888 - 958
Target Start/End: Complemental strand, 29390191 - 29390121
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaacc 958  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||| ||| | |||||||||    
T  29390191 ggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcaacaatcaaatcaaacc 29390121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 871 - 972
Target Start/End: Original strand, 27507027 - 27507128
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||| ||||| ||| |||| | ||||  ||| ||||||||| || |||||||||||||||||  || | | |||| ||| ||||||||||||||||||    
T  27507027 ttggttcggatgtattcggatcatttttttactcaaccgcatgctttggttcggtttgcggttttgattttaccaactgaaccaaaccaaaccaaaccgc 27507126  T
Q  971 aa 972  Q
    ||    
T  27507127 aa 27507128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 871 - 972
Target Start/End: Original strand, 36202963 - 36203064
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||||||||| ||| || | || |||  ||| |||||||||||| |||| ||||||||| || ||| | | |||||||| || |||||||||||||||    
T  36202963 ttggtttggatgtattcggttcacatttttactcaaccgcatggtttggtttggtttgcggctttcattttaccaaccgaaccataccaaaccaaaccgc 36203062  T
Q  971 aa 972  Q
    ||    
T  36203063 aa 36203064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 905 - 963
Target Start/End: Complemental strand, 6248602 - 6248544
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaacc 963  Q
    |||||||||||| |||||||||||||||||  || | | |||||||| |||||||||||    
T  6248602 aaccgcatggtttggttcggtttgcggttttgattttaccaaccgaaccaaaccaaacc 6248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 910 - 972
Target Start/End: Complemental strand, 12974098 - 12974036
Alignment:
Q  910 catggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    ||||||| |||||||||||| ||||  || | | |||||||| ||||||||||||||||||||    
T  12974098 catggtttggttcggtttgctgttttgattttaccaaccgaaccaaaccaaaccaaaccgcaa 12974036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 2e-80; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 867 - 1099
Target Start/End: Original strand, 25297806 - 25298038
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||| || ||||||||| ||||||||||| |  ||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  25297806 gcacttgattcggatgaattcggatgacttttgctttgaaccgcacggttcggtttggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaa 25297905  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  25297906 ccgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatcgcttttgattcgatttttccattgttgcaccatcagg 25298005  T
Q  1067 ttcaattctaatttcttaccatctatttcaatt 1099  Q
    ||| ||||||||||||| |||||| ||||||||    
T  25298006 ttcgattctaatttctttccatctctttcaatt 25298038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 44979325 - 44979560
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| |||||| |||| |||||||||||  |||| | || |||||||||||||||||||||| |||||| ||||||||||||||    
T  44979325 gcacttggttcggatgaattcggatgaattttgcactgaaccgcgcggtttgatttggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaa 44979424  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||| |||||| |||    
T  44979425 ccgcaagaataatgaatgttacttaaacatgtactagcccaattacatagcccaggaataatctcttttgattcgatttttccattgttgcaccatgagg 44979524  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||||| ||| |||||| ||| |||||||    
T  44979525 ttcaattctaattcctttccatctcttttaattcat 44979560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 888 - 1102
Target Start/End: Complemental strand, 44035821 - 44035607
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatatta 987  Q
    ||||||||||| |||||||||||  ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  44035821 ggatgacttttgcactgaaccgcgcggttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaataatgaatatta 44035722  T
Q  988 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttacca 1087  Q
    | ||||||||||||||| || |||||||||  |||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||| ||| |||    
T  44035721 cttaaacatgtactagctcagttacataactcaagaataatctcttttgattcgattttttcattgttgcacgatcaagttcgattctaattcctttcca 44035622  T
Q  1088 tctatttcaattcat 1102  Q
    ||| |||||||||||    
T  44035621 tctctttcaattcat 44035607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 11376414 - 11376184
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||||||  |||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||| ||| |||||||     ||    
T  11376414 gcacttggttcggatgaattcagatgacttttgcactgaaccgcgcggttcggttcggtttgcagtttgcatctcagcaactgaaccaaacca-----aa 11376320  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||| |||| || |||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  11376319 ccgcaagaatactgaatattacttaaacatgtactagctcaattgcatagcccaagaataatcgcttttgattcgatttttccattgttgcaccatcagg 11376220  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  11376219 ttcgattctaattcctttccatctctttcaattcat 11376184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 867 - 1083
Target Start/End: Complemental strand, 18360333 - 18360117
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||| |||| | ||||||||| || |||||| |  ||||||||| ||||| | ||||||||||||||||||||| ||||||||||||||    
T  18360333 gcacttggttcggataaattcgaatgacttttgcattgaaccacgcggttcggtttggtttacagtttgcatctcagcaaccgaaccaaaccaaaccaaa 18360234  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||||||| ||  | ||||||||||||||||||||||||| ||||||| |||||||| |    
T  18360233 ccgcaagaataatcaatattacttaaacttgtactagcccaattacatagcccgaaaataatctcttttgattcgatttttccattgttgcaccatcatg 18360134  T
Q  1067 ttcaattctaatttctt 1083  Q
    ||| |||||||||||||    
T  18360133 ttcgattctaatttctt 18360117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 19936675 - 19936905
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||||||  |||| ||||| |||||||| ||  ||||||||||||||||| ||||| ||||||||||||     |||||||||||||    
T  19936675 gcacttggttcggatgaattcagatgtctttttcactgaactgcgcggttcggttcggtttgcagtttgtatctcagcaacc-----aaaccaaaccaaa 19936769  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| || |||||||||||| ||| |||||| |  ||||||||| | |||||||||||||||||||||||| |||||||| |    
T  19936770 ccgcaagaataatgaatattacttatacatgtactagctcaaatacatagctcaagaataatatattttgattcgattttttcattgttgcaccatcatg 19936869  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||||||| ||||||  ||||||||||    
T  19936870 ttcgattctaatttctttccatctcattcaattcat 19936905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 913 - 1102
Target Start/End: Original strand, 17916454 - 17916645
Alignment:
Q  913 ggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattac 1012  Q
    ||||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17916454 ggttcggtttggtttgtggtttgcatctcagcaaccgagccaaaccaaaccaaaccgcaagaataatgaatattacttaaacatgtactagcccaattac 17916553  T
Q  1013 ataacctaagaataatctcttttgattcgattttttcattgttccaccatc--aggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| |  |||||||||||||||||||||  ||||| |||| || |||||||  |||||| ||| ||||| ||| |||||| |||||||||||    
T  17916554 atagctcaagaataatctcttttgattcattttttccattattgcaccatcagaggttcgattataattcctttccatctctttcaattcat 17916645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 868 - 1079
Target Start/End: Complemental strand, 34910841 - 34910630
Alignment:
Q  868 cacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttg-----cggtttgcatctcagcaaccgaatcaaaccaaac 962  Q
    ||||||||| |||||||||  |||||||||| || | ||||||  | ||||||||||||||     ||||||| |||| ||||||||     || |||||    
T  34910841 cacttggttcggatgaattcagatgacttttgcaataaaccgcgcgtttcggttcggtttggtttacggtttgaatctgagcaaccg-----aaacaaac 34910747  T
Q  963 caaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccat 1062  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||| || ||||||||| |||||||||||||||||| ||||||| ||||||    
T  34910746 caaaccgcaagaataatgaatattacttaaacatgtactaacccaattacatagcccaagaataatatcttttgattcgatttttccattgttgcaccat 34910647  T
Q  1063 caggttcaattctaatt 1079  Q
    || |||| |||||||||    
T  34910646 caagttcgattctaatt 34910630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 9811849 - 9811739
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9811849 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 9811750  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  9811749 ccgcaaaaata 9811739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 20420887 - 20420777
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  20420887 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaa 20420788  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  20420787 ccgcaaaaata 20420777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 36412911 - 36413021
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  |||||||||   |||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  36412911 gcacttggttcggatgagttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaa 36413010  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  36413011 ccgcaaaaata 36413021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 867 - 964
Target Start/End: Complemental strand, 16579099 - 16579002
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaacca 964  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  16579099 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaactgaaccaaaccaaacca 16579002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 888 - 978
Target Start/End: Original strand, 42785101 - 42785191
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataa 978  Q
    ||||||||||| || |||||| |  ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  42785101 ggatgacttttgcattgaaccacgcggttcggtttggtttgcggtttgcatctcagaaaccgaaccaaaccaaaccaaaccgtaagaataa 42785191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 895 - 972
Target Start/End: Complemental strand, 44086033 - 44085956
Alignment:
Q  895 ttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||| ||||||||||||||| |||| |||||| ||||| ||| ||| |||||||| ||||||||||||||||||||    
T  44086033 ttttcctctgaaccgcatggtttggtttggtttgtggttttcatttcaccaaccgaaccaaaccaaaccaaaccgcaa 44085956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 871 - 968
Target Start/End: Complemental strand, 41166722 - 41166625
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    |||||||||||| |||  ||| |||||| |||| |||||||||||| | || |||||||||||| ||| | | |||||||| ||||||||||||||||    
T  41166722 ttggtttggatgcattcagatcactttttcactcaaccgcatggtttgatttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaacc 41166625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1027 - 1102
Target Start/End: Complemental strand, 20420572 - 20420497
Alignment:
Q  1027 atctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||| ||| ||||||||||| ||||||| || |||||||||  ||||||||| ||| ||||||  ||||||||||    
T  20420572 atctcctttaattcgatttttccattgttgcatcatcaggtttgattctaattcctttccatctccttcaattcat 20420497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 4e-78; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 867 - 1099
Target Start/End: Complemental strand, 48996612 - 48996380
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||| |||| ||||||||||| || ||||||||  ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||    
T  48996612 gcacttggttcggatcaattcggatgacttttgcaatgaaccgcgcggttcggtttgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 48996513  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||      
T  48996512 ccgcaagaataatgaatattacttaaacatgtactagcctaattacatagcctaagaataatctcttttgattcgattttttcattgttgcaccatcaaa 48996413  T
Q  1067 ttcaattctaatttcttaccatctatttcaatt 1099  Q
    ||| ||||||||| ||| ||| || ||||||||    
T  48996412 ttcgattctaattcctttccacctctttcaatt 48996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 40899634 - 40899869
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| | |||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40899634 gcacttggttcggatgaattcggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 40899733  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||| || ||| |||||||||||||||||||||||| ||||||| ||||||||      
T  40899734 ccgcaagaataatgaatgttacttaaacatgtaatagcccaattacatagcccaaggataatctcttttgattcgatttttccattgttgcaccatcaaa 40899833  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||||| ||| |||||| ||| |||||||    
T  40899834 ttcaattctaattcctttccatctctttaaattcat 40899869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 889 - 1102
Target Start/End: Complemental strand, 32137203 - 32136990
Alignment:
Q  889 gatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattac 988  Q
    |||||||||| || |||||||   ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||||    
T  32137203 gatgacttttgcaatgaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccacaagaatgatgaatattac 32137104  T
Q  989 ctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccat 1088  Q
     |||||||||||||||||||||||||| | |||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||| ||||| ||| ||||    
T  32137103 ttaaacatgtactagcccaattacatagcttaagaataatttctttttattcgattttttcattgttgcaccatcaggttcgattttaattcctttccat 32137004  T
Q  1089 ctatttcaattcat 1102  Q
    || |||||||||||    
T  32137003 ctctttcaattcat 32136990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 878 - 1102
Target Start/End: Original strand, 30193541 - 30193765
Alignment:
Q  878 ggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaata 977  Q
    ||||||||| | ||||||||| || |||||||   |||||||||| |||||| ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  30193541 ggatgaattcgtatgacttttgcaatgaaccgtgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccataccgcaagaata 30193640  T
Q  978 atgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaa 1077  Q
    ||||||||||| |||| ||||| || |||||||||||| |  ||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||| |||    
T  30193641 atgaatattacttaaatatgtattatcccaattacatagctcaagaataatttcttttgattcgatttttccattgttgcaccatcaggttcgattttaa 30193740  T
Q  1078 tttcttaccatctatttcaattcat 1102  Q
    || ||| |||||| |||||||||||    
T  30193741 ttcctttccatctctttcaattcat 30193765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 8176162 - 8176387
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||| | | ||||||||| ||||||||||| | |||||||||| ||||||||||||||||||||||||          ||||||||    
T  8176162 gcacttggttcggatgaactcgaatgacttttgcactgaaccgcgtcgttcggttcgatttgcggtttgcatctcagcaacc----------aaaccaaa 8176251  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||||||| ||||||||||    
T  8176252 ccgcaagaataatgaagattacttaaacatgtactagcccaattacatagcccaaaaataatctcttttgattcgatttttccattgttgcaccatcagg 8176351  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| || |||||| ||| |||||| ||| |||||||    
T  8176352 ttcgatcctaattcctttccatctcttttaattcat 8176387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 891 - 1102
Target Start/End: Complemental strand, 52345216 - 52345006
Alignment:
Q  891 tgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacct 990  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  52345216 tgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattactt 52345117  T
Q  991 aaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatct 1090  Q
    ||||||||||||| || ||| |||| |  ||||||| || ||||||||| ||||||| |||| || || |||||||||| ||||||| || || ||| ||    
T  52345116 aaacatgtactagtccgattgcatagctcaagaatagtcgcttttgatttgatttttccattattgca-catcaggttcgattctaacttatttccaact 52345018  T
Q  1091 atttcaattcat 1102  Q
     |||||||||||    
T  52345017 ctttcaattcat 52345006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 888 - 1102
Target Start/End: Original strand, 40806396 - 40806602
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatatta 987  Q
    ||||||||||| ||||||||||||     ||||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  40806396 ggatgacttttacactgaaccgca-----cggtttgatttgcggtttgcatctcagcaactgaaccaaaccaaaccaaaccgcaagaataatgaatatta 40806490  T
Q  988 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttacca 1087  Q
    | |||| |||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||    || ||||||| ||||||||| ||| |||    
T  40806491 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcgattttttcattgtt---gcaacaggttcgattctaattcctttcca 40806587  T
Q  1088 tctatttcaattcat 1102  Q
    ||| |||||||||||    
T  40806588 tctctttcaattcat 40806602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 889 - 1102
Target Start/End: Complemental strand, 6333832 - 6333614
Alignment:
Q  889 gatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaac-----cgcaagaataatgaat 983  Q
    |||||||||| |||||||||||  | ||||||||| ||||||| |||||||| |||||||||| |||||||||||||||     ||||||||||||||||    
T  6333832 gatgacttttacactgaaccgcgcgattcggttcgatttgcggcttgcatcttagcaaccgaaccaaaccaaaccaaactaaaccgcaagaataatgaat 6333733  T
Q  984 attacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttctt 1083  Q
    ||||| |||| ||||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||| ||| ||||||||||||| |||||||||  ||    
T  6333732 attacttaaatatgtactagcccaattacatagctcaagaataatctcttttgattcaatttttccatcgttgcaccatcaggttcgattctaattcatt 6333633  T
Q  1084 accatctatttcaattcat 1102  Q
     |||||| |||||||||||    
T  6333632 tccatctctttcaattcat 6333614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 10219206 - 10218981
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| | ||||| | ||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||       | |   |||||||||||    
T  10219206 gcacttggttcgaatgaactcggatgacttttacactgaaccgcgcggttcggtttggtttgcggtttgcatctca-------agt---accaaaccaaa 10219117  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||| ||||||| ||||||| ||||||| ||||||| ||    
T  10219116 ccgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcatttgattagatttttccattgttgcaccatctgg 10219017  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| ||| |||||| |||||||||||    
T  10219016 ttcgattctaattcctttccatctctttcaattcat 10218981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 925 - 1102
Target Start/End: Original strand, 23937130 - 23937307
Alignment:
Q  925 tttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaa 1024  Q
    |||| ||||||||||||| |||| ||| |||||||||| |||||||||||||||| |||||||| ||||||| |||||| |||||||||||||  |||||    
T  23937130 tttgtggtttgcatctcaacaactgaaccaaaccaaactaaaccgcaagaataataaatattacttaaacatatactagtccaattacataactcaagaa 23937229  T
Q  1025 taatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    |||||||||| |||| ||||||| ||||||| |||||||| |||| ||||||||| ||| |||||| |||||||||||    
T  23937230 taatctctttagatttgatttttccattgttgcaccatcatgttctattctaattcctttccatctctttcaattcat 23937307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 867 - 1102
Target Start/End: Complemental strand, 31301922 - 31301697
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||||||  ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||          |||||    
T  31301922 gcacttggttcggatgaattcagatgacttttc-actgaaccacatggttcagttcggtttgcggtttgcatctcagcaaccgaa----------ccaaa 31301834  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataa-tctcttttgattcgattttttcattgttccaccatcag 1065  Q
    ||||||||||||| |||||||| ||||| |||| |||||||||||||||||  |||||||| | | |||| |||||| |||||||||||| |||||||||    
T  31301833 ccgcaagaataatcaatattacttaaacttgtattagcccaattacataactcaagaataattttttttttattcgactttttcattgttgcaccatcag 31301734  T
Q  1066 gttcaattctaatttcttaccatctatttcaattcat 1102  Q
     ||| |||||||||  || ||||||  ||||||||||    
T  31301733 tttcgattctaattcatttccatctccttcaattcat 31301697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 993
Target Start/End: Original strand, 26477743 - 26477869
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| |||||||||||  ||| |||||   ||||||||| ||||||||||||||||||||||||||||| |||||||||||||     
T  26477743 gcacttggttcggatgaattcggatgacttttgtactaaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaat 26477842  T
Q  967 ccgcaagaataatgaatattacctaaa 993  Q
    || ||||||||||||||||||| ||||    
T  26477843 ccacaagaataatgaatattacttaaa 26477869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 29640104 - 29639994
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29640104 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 29640005  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  29640004 ccgcaaaaata 29639994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 50570572 - 50570682
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50570572 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 50570671  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  50570672 ccgcaaaaata 50570682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 42558192 - 42558082
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42558192 gcacttggttcggatgagttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 42558093  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  42558092 ccgcaaaaata 42558082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 888 - 1037
Target Start/End: Complemental strand, 52345353 - 52345214
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatatta 987  Q
    |||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||||||||||    
T  52345353 ggatgacttttgtactgaatcgcatggttcggttcggtttgtggtttgcatctcagcaaccgaa----------ccaaaccgcaagaataatgaatatta 52345264  T
Q  988 cctaaacatgtactagcccaattacataacctaagaataatctcttttga 1037  Q
    | ||||||||||||||||||||| |||| |  ||||||| || |||||||    
T  52345263 cttaaacatgtactagcccaattgcatagctcaagaatagtcgcttttga 52345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 36078793 - 36078683
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  36078793 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccaaa 36078694  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  36078693 ccgcaaaaata 36078683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 867 - 979
Target Start/End: Original strand, 5261405 - 5261517
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    ||||||| || |||||||||  |||||||||| |||||||||||  ||||||||||||||||||||||||||||||| || |||| |||| |||||||||    
T  5261405 gcacttgattcggatgaattcagatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagaaatcgaaccaaatcaaaccaaa 5261504  T
Q  967 ccgcaagaataat 979  Q
    | |||||||||||    
T  5261505 ctgcaagaataat 5261517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 871 - 977
Target Start/End: Original strand, 29643325 - 29643431
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||| |||||| || |||||||||||  ||||||||||  |||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  29643325 ttggttcggatgagttcggatgacttttaaactgaaccgcgcggttcggttcggtttgtggcttgcatctcagcaaccgaaccaaaccaaaccaaaccgc 29643424  T
Q  971 aagaata 977  Q
    || ||||    
T  29643425 aaaaata 29643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 926 - 1015
Target Start/End: Complemental strand, 43631007 - 43630918
Alignment:
Q  926 ttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacata 1015  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||    
T  43631007 ttgcggttgacatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattacttaaaaatgtaatagcccaactacata 43630918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 45983865 - 45983798
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||| ||||||| |||| |||||||||||| ||| | | |||||||||||||||||||||||||||||    
T  45983865 aaccacatggtttggtttggtttgcggttttcattttaccaaccgaatcaaaccaaaccaaaccgcaa 45983798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 874 - 972
Target Start/End: Complemental strand, 48338903 - 48338805
Alignment:
Q  874 gtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    ||||||||| ||| |||| ||||||   || |||||||||||| |||| |||||||||||| ||| | | |||||||| |||||||||| |||||||||    
T  48338903 gtttggatgtattcggatcacttttttgctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaacaaaaccgcaa 48338805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1027 - 1102
Target Start/End: Complemental strand, 29639828 - 29639753
Alignment:
Q  1027 atctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||| ||| ||||||||||| ||||||| || |||||||||| ||||||||| ||| ||||||  ||||||||||    
T  29639828 atctcctttaattcgatttttccattgttgcatcatcaggttcgattctaattcctttccatctccttcaattcat 29639753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 871 - 974
Target Start/End: Original strand, 48292945 - 48293048
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||||||||| ||| |||| ||||||   || |||| ||||||| |||| |||||||||||| ||| | | | ||| || ||||||||||||||||||    
T  48292945 ttggtttggatgtattcggatcacttttttcctcaaccacatggtttggtttggtttgcggttttcattttacctacccaaacaaaccaaaccaaaccgc 48293044  T
Q  971 aaga 974  Q
    ||||    
T  48293045 aaga 48293048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 900 - 977
Target Start/End: Complemental strand, 51395330 - 51395253
Alignment:
Q  900 cactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaata 977  Q
    |||||||||||   ||||||||| |||| |||||| ||||| || |  |||| |||||||||||||||||||||||||    
T  51395330 cactgaaccgcgcagttcggttcagtttacggtttacatctgagaagtcgaaccaaaccaaaccaaaccgcaagaata 51395253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 874 - 970
Target Start/End: Complemental strand, 21069622 - 21069527
Alignment:
Q  874 gtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    ||||||||| ||| |||| | ||||  ||| ||||||||||||  |||||||||||| |||| || | | |||||||| ||||||||||||||||||    
T  21069622 gtttggatgtattcggatcaattttttactcaaccgcatggttttgttcggtttgcgttttg-attttaccaaccgaaccaaaccaaaccaaaccgc 21069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1042 - 1102
Target Start/End: Complemental strand, 43630909 - 43630849
Alignment:
Q  1042 attttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    |||||||||||||| |||||| | |||| ||||||||| ||| |||||| |||||||||||    
T  43630909 attttttcattgttgcaccattaagttcgattctaattcctttccatctctttcaattcat 43630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 968
Target Start/End: Original strand, 1564606 - 1564669
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    |||||||||||| |||||||||||||||||  || | | |||| ||| ||||||||||||||||    
T  1564606 aaccgcatggtttggttcggtttgcggttttgattttaccaactgaaccaaaccaaaccaaacc 1564669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 3999288 - 3999221
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||| ||||||| |||||||||||||||||  || | | |||| |||| |||||||||||||||||||    
T  3999288 aaccacatggtttggttcggtttgcggtttttattttaccaactgaattaaaccaaaccaaaccgcaa 3999221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 8485212 - 8485145
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||||||||| ||| |||||||||||||  || | | ||||||||  |||||||||||||||||||    
T  8485212 aaccgcatggtttggtccggtttgcggttttgattttaccaaccgaactaaaccaaaccaaaccgcaa 8485145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 41260643 - 41260576
Alignment:
Q  905 aaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    ||||||||||||||||||  |||| |||||  || | | |||||||||||||||||||||||| ||||    
T  41260643 aaccgcatggttcggttcaatttgtggtttttattttaccaaccgaatcaaaccaaaccaaactgcaa 41260576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 909 - 972
Target Start/End: Complemental strand, 41325925 - 41325862
Alignment:
Q  909 gcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||||| |||||||||||| ||||  || | | |||||||| ||||||||||||||||||||    
T  41325925 gcatggtttggttcggtttgcagttttgattttaccaaccgaaccaaaccaaaccaaaccgcaa 41325862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 875 - 972
Target Start/End: Original strand, 36105989 - 36106086
Alignment:
Q  875 tttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    |||||||| |||  ||| ||||||  ||| |||||||||||| | || | |||||||||| ||| | | |||||||| || |||||||||||||||||    
T  36105989 tttggatgtattcagatcacttttttactcaaccgcatggtttgctttgctttgcggtttccattttaccaaccgaaccagaccaaaccaaaccgcaa 36106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 2e-77; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 35039488 - 35039723
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| | |||||||||  |||| ||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  35039488 gcacttggttcggatgaattcggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaaa 35039587  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||||||||      
T  35039588 ccgcaagaataatgaatgttacttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaaa 35039687  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||||| ||| |||||| ||| |||||||    
T  35039688 ttcaattctaattcctttccatctcttttaattcat 35039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 893 - 1102
Target Start/End: Complemental strand, 33550830 - 33550621
Alignment:
Q  893 acttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacctaa 992  Q
    |||||| |||||||||||  |||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  33550830 acttttgcactgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaaccgcaagaataatgaatattacttaa 33550731  T
Q  993 acatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctat 1092  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||| | |||| |    
T  33550730 acatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcgatctct 33550631  T
Q  1093 ttcaattcat 1102  Q
    || |||||||    
T  33550630 tttaattcat 33550621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 13801532 - 13801762
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| |||||||||||  | ||||||||||||||     ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  13801532 gcacttggttcggatgaattcggatgacttttgtattgaaccgcatggtt-----cggtttgcggtttgcatctcatcaactgaaccaaaccaaaccaaa 13801626  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  13801627 ccgcaagaataatgaatattacttaaatatgtactagcccaattacatagctcaagaataatctcttttgattcaatttttccattgttgcaccatcagg 13801726  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||| |||  ||||| |||||||||||    
T  13801727 ttcgattctaattccttttcatctctttcaattcat 13801762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 868 - 1102
Target Start/End: Complemental strand, 25137675 - 25137442
Alignment:
Q  868 cacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaac 967  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||  |||| |||| |||| ||||| ||||||||| |||||||| |||||  ||||||||    
T  25137675 cacttggttcggatgaattcggatgacttttgcactgaaccgcgcggtttggtttggtt-gcggtatgcatctcatcaaccgaaccaaactgaaccaaac 25137577  T
Q  968 cgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggt 1067  Q
    | ||| ||||||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||| | || |||||||||||    
T  25137576 cacaataataatgaatattacttaaacatgtactatcccaattacatagcccaagaataatctcttttgattcgattttttcaatattgcaccatcaggt 25137477  T
Q  1068 tcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||||  || || ||| |||||||||||    
T  25137476 tcaattctaattcatttccttctctttcaattcat 25137442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 888 - 1096
Target Start/End: Complemental strand, 10591350 - 10591142
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatatta 987  Q
    ||||||||||| |||||||||||  |||||| ||||||||||||||||| ||||| |||| ||| ||||||||||  |||||||||||||||||||||||    
T  10591350 ggatgacttttgcactgaaccgcgcggttcgattcggtttgcggtttgcgtctcaacaacagaaccaaaccaaactgaaccgcaagaataatgaatatta 10591251  T
Q  988 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttacca 1087  Q
    | |||||||||| ||||||||||||||| |  ||||||||| ||||| ||||||||||||||||||||  |||||||||||| |||||||||  || |||    
T  10591250 cttaaacatgtaatagcccaattacatagctcaagaataatgtctttcgattcgattttttcattgttgtaccatcaggttcgattctaattcatttcca 10591151  T
Q  1088 tctatttca 1096  Q
    ||| |||||    
T  10591150 tctctttca 10591142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 888 - 1102
Target Start/End: Complemental strand, 15860239 - 15860026
Alignment:
Q  888 ggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatatta 987  Q
    ||||||||||| ||||||||||   |||||| || ||||||| ||||||| |||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  15860239 ggatgacttttacactgaaccgtgcggttcgatttggtttgcagtttgcacctcaccaaccgaaccaaaccaaaccaaactgcaagaataatgaatatta 15860140  T
Q  988 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttacca 1087  Q
      |||||||||||||||||||||||||| |  |||||||||||||||||||| || |||| ||||||| ||||||||| | | |||||||||  || | |    
T  15860139 attaaacatgtactagcccaattacatagctcaagaataatctcttttgattaga-ttttccattgttgcaccatcagttccgattctaattcttttcta 15860041  T
Q  1088 tctatttcaattcat 1102  Q
    ||| |||||||||||    
T  15860040 tctctttcaattcat 15860026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 867 - 984
Target Start/End: Original strand, 10390590 - 10390707
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||||||   ||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  10390590 gcacttggttcggatgaattcaaatgacttttgcactgaaccgcgcggttcggttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 10390689  T
Q  967 ccgcaagaataatgaata 984  Q
    ||||||||||||||||||    
T  10390690 ccgcaagaataatgaata 10390707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 867 - 977
Target Start/End: Complemental strand, 12271015 - 12270905
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12271015 gcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 12270916  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  12270915 ccgcaaaaata 12270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 867 - 977
Target Start/End: Original strand, 5866632 - 5866742
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||||| || ||||| |||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5866632 gcacttggttcggatgagttcggatgtcttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaa 5866731  T
Q  967 ccgcaagaata 977  Q
    |||||| ||||    
T  5866732 ccgcaaaaata 5866742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 867 - 1005
Target Start/End: Original strand, 10493941 - 10494079
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| |||| |||||| ||||||||| ||||||||||  | ||||| |||||||||| |||||||||||||||||  || ||||||||||||||    
T  10493941 gcacttggttcggataaatttgaatgacttttgcactgaaccgtgtagttcgattcggtttgcagtttgcatctcagcaactaaaccaaaccaaaccaaa 10494040  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcc 1005  Q
    | |||||||||||   | |||| ||||| ||||||||||    
T  10494041 ctgcaagaataatcgttgttacttaaacttgtactagcc 10494079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1020 - 1102
Target Start/End: Original strand, 10390729 - 10390811
Alignment:
Q  1020 aagaataatctcttttgattcgattttttcattgttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||||| ||| ||||| |||||| ||||||| ||||||||| ||| ||| ||||| ||| |||||| |||||||||||    
T  10390729 aagaataatctttttcgattcaatttttccattgttgcaccatcagattcgattttaattcctttccatctctttcaattcat 10390811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 871 - 934
Target Start/End: Complemental strand, 4577649 - 4577586
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggttt 934  Q
    |||||||||||||||| |||| ||||||  ||| ||||||| |||| |||||||||||| ||||    
T  4577649 ttggtttggatgaattcggatcacttttttacttaaccgcaaggtttggttcggtttgcagttt 4577586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 144; Significance: 4e-75; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 871 - 1102
Target Start/End: Original strand, 69089 - 69320
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||||||||||||| ||||||||||| || ||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  69089 ttggtttggatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgc 69188  T
Q  971 aagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttca 1070  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| || || ||||||||||||||||||||||||| ||||||| ||||||||  |||     
T  69189 aagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatctcttttgattcgatttttccattgttgcaccatcaaattcg 69288  T
Q  1071 attctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||| ||| |||||| |||||||||||    
T  69289 attctaattcctttccatctctttcaattcat 69320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 871 - 1064
Target Start/End: Original strand, 77195 - 77388
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||||||||||||| ||||||||||| || ||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  77195 ttggtttggatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgc 77294  T
Q  971 aagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatca 1064  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| || || ||||||| ||||||||||||||||| ||||||| ||||||||    
T  77295 aagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatcacttttgattcgatttttccattgttgcaccatca 77388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 140; Significance: 9e-73; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 47320 - 47555
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||| |||||| ||||| ||||||| |||||||| ||||||||||||||    
T  47320 gcacttggttcggatgaattcggatgacttttgcactgaaccgcatggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaaa 47419  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    || ||||||||||||||||||| ||||||| |||||||||||||||||| |  ||||||||| |||||||||||||||| | ||||||| || |||||||    
T  47420 ccacaagaataatgaatattacttaaacatctactagcccaattacatagctcaagaataatttcttttgattcgatttgtccattgttgcaacatcagg 47519  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| |||||||||| || |||||| |||||||||||    
T  47520 ttccattctaatttatttccatctctttcaattcat 47555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 867 - 1102
Target Start/End: Original strand, 40124 - 40359
Alignment:
Q  867 gcacttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaa 966  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||| ||| |||||| |||||| ||||| ||||||| |||||||| ||||||||||||||    
T  40124 gcacttggttcggatgaattcggatgacttttgcactgaaccgcgtggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaaa 40223  T
Q  967 ccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcagg 1066  Q
    || ||||||||||||||||||| ||||||| |||||||||||||||||| |  ||||||||| ||||||||||| |||| | ||||||| || |||||||    
T  40224 ccacaagaataatgaatattacttaaacatctactagcccaattacatagctcaagaataatttcttttgattcaatttgtccattgttgcaacatcagg 40323  T
Q  1067 ttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| |||||||||| || |||||| |||||||||||    
T  40324 ttccattctaatttatttccatctctttcaattcat 40359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 132; Significance: 5e-68; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 871 - 1102
Target Start/End: Complemental strand, 106564 - 106333
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||| ||||||||| ||||||||||| || ||||||||  ||||||||| |||||||||||||||||||| |||||||| |||||| |||||| ||||    
T  106564 ttggttcggatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcaacaaccgaaccaaacccaaccaacccgc 106465  T
Q  971 aagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcattgttccaccatcaggttca 1070  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||| |||||| |||||| ||||||||||| ||||||| ||||||||  |||     
T  106464 aagaataatgaatattacttaaacatgtactagcctaattacatagcctaataataatttctttttattcgatttttccattgttgcaccatcaaattcg 106365  T
Q  1071 attctaatttcttaccatctatttcaattcat 1102  Q
    ||||||||| ||| |||||| |||||||||||    
T  106364 attctaattcctttccatctctttcaattcat 106333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 953 - 1102
Target Start/End: Complemental strand, 129089 - 128940
Alignment:
Q  953 caaaccaaaccaaaccgcaagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcgattttttcatt 1052  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| || || ||||||||||||  ||||||||||| ||||    
T  129089 caaaccaaaccaacccgcaagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatctctttatattcgatttttccatt 128990  T
Q  1053 gttccaccatcaggttcaattctaatttcttaccatctatttcaattcat 1102  Q
    ||| ||||||||  ||| ||||||||| ||| |||||| |||||||||||    
T  128989 gttgcaccatcaaattcgattctaattcctttccatctctttcaattcat 128940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 871 - 977
Target Start/End: Original strand, 5471 - 5577
Alignment:
Q  871 ttggtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgc 970  Q
    |||||| |||||| || | |||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5471 ttggttcggatgagttcgaatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgc 5570  T
Q  971 aagaata 977  Q
    || ||||    
T  5571 aaaaata 5577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 874 - 972
Target Start/End: Complemental strand, 26425 - 26327
Alignment:
Q  874 gtttggatgaatttggatgacttttccactgaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaa 972  Q
    ||||||||| ||| |||| ||||||   || |||||||||||| |||| |||||||||||| ||| | | |||||||| |||||||||| |||||||||    
T  26425 gtttggatgtattcggatcacttttttgctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaacaaaaccgcaa 26327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 910 - 968
Target Start/End: Complemental strand, 1707 - 1649
Alignment:
Q  910 catggttcggttcggtttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaacc 968  Q
    ||||||| |||| ||||||||||||  || | | |||||||||||||||||||||||||    
T  1707 catggtttggtttggtttgcggtttttattttaccaaccgaatcaaaccaaaccaaacc 1649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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