View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1299_2D_high_64 (Length: 230)
Name: NF1299_2D_high_64
Description: NF1299_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1299_2D_high_64 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 48892230 - 48892046
Alignment:
| Q |
20 |
agacagtgatgggtttggattgttgtttgaggaacagtaccatgcagacttggtcaacaatgatgacattgaatgccaatctggttttcttgagaagatg |
119 |
Q |
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| T |
48892230 |
agacagtgatgggtttggattgttgtttgaggaacagtaccatgcagacttggtcaacaatgatgacattgaatgccaatctggttttcttgagaagatg |
48892131 |
T |
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| Q |
120 |
tatgaagagtacttgcagctattgaagaatgaagaaaatcatgaaaaaatactagattcttttgctcagtccttattagcgtgag |
204 |
Q |
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| T |
48892130 |
tatgaagagtacttgcagctattgaagaatgaagaaaatcatgaaaaaatactagattcttttgctcagtccttattagcgtgag |
48892046 |
T |
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