View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1299_2D_low_8 (Length: 1202)

Name: NF1299_2D_low_8
Description: NF1299_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1299_2D_low_8
NF1299_2D_low_8
[»] chr2 (52 HSPs)
chr2 (511-1080)||(19955361-19955932)
chr2 (328-509)||(5394380-5394560)
chr2 (324-507)||(31579208-31579391)
chr2 (324-507)||(42745095-42745278)
chr2 (323-505)||(18105344-18105525)
chr2 (324-443)||(44732616-44732735)
chr2 (324-496)||(9438126-9438298)
chr2 (324-505)||(17981477-17981657)
chr2 (320-428)||(37568785-37568893)
chr2 (324-457)||(12133259-12133392)
chr2 (327-498)||(993736-993906)
chr2 (326-494)||(7020352-7020518)
chr2 (324-481)||(44752199-44752356)
chr2 (374-513)||(37179974-37180108)
chr2 (326-448)||(7157479-7157601)
chr2 (234-326)||(19955916-19956008)
chr2 (354-500)||(38372980-38373124)
chr2 (802-933)||(20257504-20257637)
chr2 (422-505)||(25423821-25423904)
chr2 (323-410)||(28365927-28366014)
chr2 (440-513)||(37092168-37092241)
chr2 (324-470)||(33756956-33757102)
chr2 (802-933)||(20246933-20247065)
chr2 (329-461)||(17627543-17627675)
chr2 (322-455)||(17672608-17672741)
chr2 (336-485)||(39401070-39401219)
chr2 (374-486)||(38743767-38743879)
chr2 (359-474)||(14121894-14122009)
chr2 (341-499)||(24412914-24413071)
chr2 (428-513)||(14551557-14551642)
chr2 (323-513)||(44814812-44815006)
chr2 (354-498)||(38463964-38464108)
chr2 (354-461)||(17658471-17658578)
chr2 (434-513)||(17655750-17655831)
chr2 (1132-1179)||(19955264-19955311)
chr2 (443-499)||(1682120-1682176)
chr2 (323-431)||(24359543-24359650)
chr2 (326-481)||(3772549-3772703)
chr2 (415-497)||(12233064-12233146)
chr2 (91-149)||(19956085-19956143)
chr2 (336-422)||(42905689-42905774)
chr2 (434-495)||(3562181-3562242)
chr2 (413-498)||(14412789-14412874)
chr2 (480-513)||(44732582-44732615)
chr2 (471-508)||(45413956-45413993)
chr2 (324-388)||(19252590-19252654)
chr2 (328-400)||(40688817-40688888)
chr2 (422-512)||(13835431-13835521)
chr2 (382-456)||(13986967-13987041)
chr2 (382-456)||(13992865-13992939)
chr2 (351-409)||(14757680-14757738)
chr2 (18-55)||(19956153-19956190)
[»] chr4 (36 HSPs)
chr4 (324-513)||(31307039-31307228)
chr4 (327-505)||(38766071-38766249)
chr4 (324-502)||(14854584-14854762)
chr4 (324-513)||(35972322-35972511)
chr4 (324-513)||(45994501-45994690)
chr4 (353-513)||(46016154-46016317)
chr4 (336-505)||(35334079-35334248)
chr4 (375-505)||(9012300-9012430)
chr4 (346-513)||(46250528-46250698)
chr4 (382-507)||(51626285-51626410)
chr4 (324-484)||(13686580-13686741)
chr4 (335-501)||(38844153-38844319)
chr4 (323-505)||(32005127-32005314)
chr4 (380-491)||(13948587-13948698)
chr4 (327-475)||(22189399-22189547)
chr4 (340-496)||(17135092-17135247)
chr4 (326-508)||(7096077-7096258)
chr4 (336-494)||(56447115-56447272)
chr4 (324-428)||(11140436-11140540)
chr4 (413-497)||(33529325-33529409)
chr4 (324-488)||(45695806-45695970)
chr4 (359-505)||(14042843-14042989)
chr4 (326-482)||(10199111-10199264)
chr4 (324-477)||(51853677-51853828)
chr4 (368-475)||(47023425-47023532)
chr4 (443-498)||(15133473-15133528)
chr4 (416-508)||(18841556-18841649)
chr4 (415-474)||(9455565-9455624)
chr4 (324-369)||(25768769-25768814)
chr4 (412-513)||(31308364-31308465)
chr4 (366-507)||(16994111-16994254)
chr4 (354-486)||(22017473-22017605)
chr4 (355-423)||(48998068-48998136)
chr4 (327-425)||(16547415-16547514)
chr4 (434-489)||(25768685-25768740)
chr4 (468-498)||(37241364-37241394)
[»] chr7 (44 HSPs)
chr7 (321-513)||(29059781-29059973)
chr7 (339-513)||(31492097-31492271)
chr7 (321-505)||(21747021-21747204)
chr7 (324-509)||(19477229-19477411)
chr7 (320-513)||(8839253-8839447)
chr7 (319-513)||(28537364-28537554)
chr7 (324-470)||(13254117-13254263)
chr7 (322-507)||(46373650-46373837)
chr7 (322-505)||(35707824-35708006)
chr7 (387-513)||(11486717-11486843)
chr7 (324-456)||(40099302-40099434)
chr7 (327-508)||(20207480-20207660)
chr7 (326-505)||(42741790-42741972)
chr7 (336-477)||(27484058-27484199)
chr7 (374-502)||(24172236-24172366)
chr7 (324-474)||(7265325-7265475)
chr7 (326-435)||(2657887-2657996)
chr7 (416-513)||(37339706-37339803)
chr7 (402-472)||(14545000-14545070)
chr7 (421-513)||(31776494-31776586)
chr7 (442-513)||(28665187-28665258)
chr7 (365-513)||(23933624-23933772)
chr7 (326-430)||(7190415-7190519)
chr7 (354-484)||(24579456-24579584)
chr7 (370-513)||(45778889-45779032)
chr7 (362-513)||(1424590-1424743)
chr7 (421-511)||(29428767-29428857)
chr7 (413-507)||(3231287-3231381)
chr7 (357-431)||(40211965-40212039)
chr7 (324-421)||(2371127-2371224)
chr7 (336-453)||(24512617-24512734)
chr7 (453-506)||(36821060-36821113)
chr7 (354-474)||(4059705-4059824)
chr7 (335-423)||(5905812-5905900)
chr7 (434-513)||(33299168-33299247)
chr7 (357-423)||(2871038-2871104)
chr7 (356-426)||(12142637-12142707)
chr7 (354-476)||(37900381-37900503)
chr7 (354-476)||(37906892-37907014)
chr7 (415-505)||(32469986-32470078)
chr7 (336-396)||(32469921-32469981)
chr7 (440-495)||(28828756-28828811)
chr7 (467-513)||(14552482-14552527)
chr7 (396-485)||(30614683-30614772)
[»] chr8 (28 HSPs)
chr8 (322-513)||(4124997-4125188)
chr8 (324-513)||(2743912-2744101)
chr8 (324-513)||(30935983-30936172)
chr8 (336-509)||(13468722-13468895)
chr8 (330-513)||(19715698-19715882)
chr8 (324-494)||(12958077-12958247)
chr8 (324-513)||(36994471-36994662)
chr8 (344-475)||(15682928-15683059)
chr8 (336-496)||(30055991-30056151)
chr8 (396-501)||(7839238-7839343)
chr8 (335-459)||(35206990-35207114)
chr8 (381-505)||(24988530-24988659)
chr8 (352-513)||(16701353-16701513)
chr8 (448-509)||(39086855-39086916)
chr8 (327-479)||(23981478-23981632)
chr8 (337-432)||(27121804-27121899)
chr8 (439-513)||(8521792-8521865)
chr8 (324-380)||(39086797-39086853)
chr8 (326-398)||(44705653-44705725)
chr8 (316-503)||(28377629-28377815)
chr8 (354-505)||(44638992-44639143)
chr8 (350-474)||(21032302-21032425)
chr8 (336-450)||(32422808-32422923)
chr8 (331-445)||(10030944-10031058)
chr8 (324-402)||(13005753-13005831)
chr8 (357-432)||(4321558-4321633)
chr8 (412-463)||(8034152-8034203)
chr8 (442-499)||(40320193-40320250)
[»] chr5 (25 HSPs)
chr5 (323-513)||(10591905-10592095)
chr5 (336-513)||(31113325-31113502)
chr5 (386-513)||(5123471-5123598)
chr5 (324-505)||(30784967-30785148)
chr5 (335-513)||(22187971-22188147)
chr5 (327-474)||(18909313-18909457)
chr5 (323-481)||(2798320-2798477)
chr5 (324-435)||(28023494-28023605)
chr5 (323-481)||(2804487-2804644)
chr5 (340-513)||(12682630-12682803)
chr5 (324-496)||(10795308-10795478)
chr5 (422-509)||(25983742-25983829)
chr5 (363-513)||(35774603-35774753)
chr5 (411-482)||(36212962-36213033)
chr5 (412-513)||(29553606-29553707)
chr5 (366-496)||(12336018-12336148)
chr5 (401-484)||(18244640-18244723)
chr5 (442-511)||(373739-373808)
chr5 (338-487)||(32313105-32313253)
chr5 (354-513)||(35914431-35914590)
chr5 (365-511)||(38951782-38951928)
chr5 (354-450)||(12487303-12487398)
chr5 (452-511)||(22402074-22402132)
chr5 (354-424)||(23422731-23422801)
chr5 (402-484)||(41446654-41446736)
[»] scaffold0182 (1 HSPs)
scaffold0182 (346-513)||(26332-26499)
[»] chr3 (35 HSPs)
chr3 (323-509)||(30995942-30996128)
chr3 (324-513)||(27763702-27763889)
chr3 (324-509)||(25224678-25224863)
chr3 (324-509)||(48204288-48204473)
chr3 (326-507)||(38331109-38331290)
chr3 (386-513)||(20861289-20861416)
chr3 (382-513)||(55123134-55123265)
chr3 (336-513)||(40294603-40294780)
chr3 (324-482)||(14352533-14352694)
chr3 (324-449)||(38088614-38088739)
chr3 (383-513)||(1642644-1642774)
chr3 (432-513)||(8757431-8757512)
chr3 (347-500)||(48210946-48211099)
chr3 (326-513)||(22288216-22288403)
chr3 (327-509)||(15283057-15283235)
chr3 (368-513)||(39950235-39950380)
chr3 (327-437)||(42514586-42514698)
chr3 (373-506)||(11767138-11767271)
chr3 (357-513)||(43621284-43621444)
chr3 (413-513)||(25739155-25739256)
chr3 (453-509)||(40318426-40318482)
chr3 (352-426)||(22755651-22755725)
chr3 (381-509)||(46725461-46725588)
chr3 (434-513)||(44941238-44941316)
chr3 (326-389)||(46604657-46604720)
chr3 (381-476)||(15446028-15446127)
chr3 (324-423)||(3765225-3765326)
chr3 (335-496)||(28967177-28967333)
chr3 (381-513)||(22288557-22288689)
chr3 (580-645)||(45334283-45334349)
chr3 (352-425)||(54877840-54877913)
chr3 (350-418)||(20711771-20711839)
chr3 (324-398)||(2195602-2195676)
chr3 (366-475)||(21223465-21223574)
chr3 (462-515)||(49502602-49502655)
[»] chr1 (43 HSPs)
chr1 (323-513)||(16756060-16756250)
chr1 (324-513)||(22022099-22022288)
chr1 (324-503)||(28724652-28724830)
chr1 (356-508)||(18428120-18428271)
chr1 (321-513)||(45806212-45806404)
chr1 (324-504)||(9780971-9781146)
chr1 (342-508)||(12035546-12035713)
chr1 (383-509)||(36806649-36806775)
chr1 (405-507)||(42297421-42297523)
chr1 (326-484)||(10840998-10841157)
chr1 (379-509)||(39547341-39547471)
chr1 (416-507)||(15642526-15642617)
chr1 (359-509)||(46864105-46864255)
chr1 (381-498)||(7242795-7242912)
chr1 (326-498)||(10750579-10750750)
chr1 (336-507)||(32534074-32534244)
chr1 (336-425)||(29124736-29124825)
chr1 (335-476)||(24801371-24801512)
chr1 (416-498)||(44913180-44913262)
chr1 (441-513)||(49071673-49071745)
chr1 (336-423)||(17600561-17600648)
chr1 (357-431)||(32883625-32883699)
chr1 (327-431)||(35692467-35692571)
chr1 (324-383)||(14500361-14500420)
chr1 (357-492)||(31733685-31733820)
chr1 (336-431)||(36982346-36982441)
chr1 (416-505)||(10367575-10367664)
chr1 (336-488)||(36086848-36087000)
chr1 (336-483)||(25655267-25655414)
chr1 (341-463)||(36522259-36522381)
chr1 (340-428)||(52912616-52912702)
chr1 (335-431)||(40019231-40019327)
chr1 (340-445)||(7624870-7624973)
chr1 (401-497)||(61161-61256)
chr1 (354-410)||(21774612-21774668)
chr1 (338-475)||(33059737-33059870)
chr1 (441-512)||(6607666-6607739)
chr1 (336-425)||(28506280-28506369)
chr1 (411-472)||(32883561-32883622)
chr1 (420-507)||(2044472-2044559)
chr1 (347-409)||(9066128-9066190)
chr1 (373-423)||(48728057-48728107)
chr1 (355-456)||(13546436-13546537)
[»] chr6 (24 HSPs)
chr6 (335-512)||(12411138-12411315)
chr6 (324-509)||(21910184-21910368)
chr6 (323-505)||(31412101-31412282)
chr6 (378-505)||(12836878-12837005)
chr6 (353-505)||(28099251-28099403)
chr6 (327-472)||(423637-423782)
chr6 (340-483)||(21028982-21029129)
chr6 (326-508)||(15614551-15614733)
chr6 (323-507)||(25084012-25084196)
chr6 (336-504)||(31107475-31107643)
chr6 (327-513)||(278374-278559)
chr6 (324-511)||(5944821-5945011)
chr6 (326-484)||(28933119-28933277)
chr6 (422-496)||(9536844-9536918)
chr6 (326-487)||(26477698-26477859)
chr6 (336-484)||(3237911-3238058)
chr6 (413-487)||(1534320-1534394)
chr6 (402-483)||(21028845-21028924)
chr6 (336-425)||(27735469-27735557)
chr6 (324-428)||(35224550-35224651)
chr6 (387-508)||(17177180-17177301)
chr6 (413-485)||(6062110-6062182)
chr6 (355-471)||(7468556-7468671)
chr6 (359-430)||(29185307-29185378)
[»] scaffold0020 (1 HSPs)
scaffold0020 (321-410)||(167831-167918)
[»] scaffold0009 (2 HSPs)
scaffold0009 (415-499)||(27212-27296)
scaffold0009 (329-420)||(32330-32421)
[»] scaffold0013 (1 HSPs)
scaffold0013 (441-513)||(29125-29197)
[»] scaffold0071 (1 HSPs)
scaffold0071 (381-476)||(16065-16164)
[»] scaffold0189 (1 HSPs)
scaffold0189 (366-482)||(10973-11089)


Alignment Details
Target: chr2 (Bit Score: 497; Significance: 0; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 511 - 1080
Target Start/End: Complemental strand, 19955932 - 19955361
Alignment:
Q  511 aaagagattatttaaccatttttatttacaacaaattgcattaaattaaatggttaaatacttaaataaaccattctaaatttttgattggttcaacatg 610  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19955932 aaagagattatttaaccatttttatttacaacaaattgcattaaattaaatggttaaatacttaaataaaccattctaaatttttgattggttcaacatg 19955833  T
Q  611 tgattccccacacgtaaccatactaagctttcacgtttcaactttggaacatgattcgtgcggttgcttcatgttaagcgatatccgtaaatgtcatgac 710  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19955832 tgattccccacacgtaaccatactaagctttcacgtttcaactttggaacatgattcgtgcggttgcttcatgttaagcgatatccgtaaatgtcatgac 19955733  T
Q  711 tcattagagagtgtgtgttgg--ataataatacataagagt-aaaaatattcgattatttctaaagagaaaaacgtgatataattttacttaacaaccta 807  Q
    |||||| ||||||||||||||  |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19955732 tcattaaagagtgtgtgttggatataataatgcataagagtaaaaaatattcgactatttctaaagagaaaaacgtgatataattttacttaacaaccta 19955633  T
Q  808 attgatttgttttttagaaaaaggctggtaatagatttcatcacttatttttaacacacgttttctattcttgtttgaattggaatttgtacaagtcttt 907  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19955632 attgatttgttttttagaaaaaggctggtaatagatttcatcacttatttttaacacacgttttcttttcttgtttgaattggaatttgtacaagtcttt 19955533  T
Q  908 cttttttggataattgacaaatatgacnnnnnnnggatatagtggacaaaaggtgacatggatattgcattttagaaagatggaaaagagaagcaaagtc 1007  Q
    |||||||||||||||||||||||||||       ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  19955532 cttttttggataattgacaaatatgactttttttggatatagtggacaaaa-gtgacatggagattgcattttagaaagatggaaaagagaagcaaagtc 19955434  T
Q  1008 ctttgcatcatcagcaataaaaacaacaaagacttgatcatatgtttgcttctacagccaaaaatataaggat 1080  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19955433 ccttgcatcatcagcaataaaaacaacaaagacttgatcataggtttgcttctacagccaaaaatataaggat 19955361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 3e-76
Query Start/End: Original strand, 328 - 509
Target Start/End: Original strand, 5394380 - 5394560
Alignment:
Q  328 aagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttaggg 427  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5394380 aagagcgcttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagca-tgttaaaactcttaggg 5394478  T
Q  428 agagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||    
T  5394479 agagcctgccgcccatttgggtcccacaatgctcgtgggattagtctccgcagttgcacgcggaggatactcgatttacacc 5394560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 324 - 507
Target Start/End: Complemental strand, 31579391 - 31579208
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||| ||    
T  31579391 acccaagagcacttagatgagatgtaacgggtctcttctagcttaatcaaggtcttgggttcgaatccagccttgggcatgcaacagtgttaaaactttt 31579292  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttaca 507  Q
    |||||||| ||||| |||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  31579291 agggagagtctgccgcccatttaagtcccacaatgctcgaggaattagtttccgcagttgcgcgcggaggatacccggtttaca 31579208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 324 - 507
Target Start/End: Complemental strand, 42745278 - 42745095
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  42745278 acccaagagcgcttagatgagatggaacgggtctcttatagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaatgttaaaactctt 42745179  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttaca 507  Q
    |||||||| ||||  || |||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  42745178 agggagagtctgctgcctatttgggttccacaatggtcgagggattagtctcagcagttgcgcgcggaggatacccggtttaca 42745095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 323 - 505
Target Start/End: Complemental strand, 18105525 - 18105344
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    |||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||    
T  18105525 aacctaagagcgcttatatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcaacaacgttaaaattct 18105426  T
Q  423 tagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    || |||||||||||| |||||||| ||| |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  18105425 tatggagagcctgccgcccatttgagtctcacaatactcgagggattagtct-cgcagttgcgcgcggaggatatccggttta 18105344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 44732735 - 44732616
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44732735 acccaagagcacttagatgagatggaacgggtctcttatagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 44732636  T
Q  424 agggagagcctgccacccat 443  Q
    |||||||||||||| |||||    
T  44732635 agggagagcctgccgcccat 44732616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 324 - 496
Target Start/End: Complemental strand, 9438298 - 9438126
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||  |||||||||||||||||  |||||| |||||||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  9438298 acccaagagcgtttagatgagatggaacgaatctcttttagcttaaccaaagtctttggttcgaatccagccttgggcatgcagcagggttaaaactctt 9438199  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggata 496  Q
    ||| ||| |||||| |||||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  9438198 aggaagaacctgccgcccatttgtgtcccacaatgcttgagggattagtttccacagttgcgcgcggaggata 9438126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 324 - 505
Target Start/End: Original strand, 17981477 - 17981657
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||| ||||||  ||  ||||||| |||||||||||| ||   |||||||||||    
T  17981477 acccaatagcgcttagatgagatggaacgagtctcttctagcttaaccaaagtcctgaatttaaatccagtcttgggcatgcaacaacattaaaactctt 17981576  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    ||||||||| |||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17981577 agggagagcttgccgca-atttgggtcccacaatgctcgagagattagtctccgcagttgcgcgcggaggatacccggttta 17981657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 320 - 428
Target Start/End: Complemental strand, 37568893 - 37568785
Alignment:
Q  320 tttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaac 419  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37568893 tttaacccaagagcacttagatgagatggaacgggtttcttctagcttaaccaaggtcctgggttcgaatccagccttaggcatgcagcagtgttaaaac 37568794  T
Q  420 tcttaggga 428  Q
    |||||||||    
T  37568793 tcttaggga 37568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 324 - 457
Target Start/End: Complemental strand, 12133392 - 12133259
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||  ||||||||||||    
T  12133392 acccaagagcgcttagatgagatggaacgagtctcttctagcttaatcaaggtcatgggttcgaatccagccttggacatgcagcaacgttaaaactctt 12133293  T
Q  424 agggagagcctgccacccatttgggtcccacaat 457  Q
    ||||||||||||||  |||||||||||| |||||    
T  12133292 agggagagcctgccgtccatttgggtcctacaat 12133259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 327 - 498
Target Start/End: Original strand, 993736 - 993906
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    ||||||| |||||||||||||  ||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||    
T  993736 caagagcgcttagatgagatgacacgtgtctcttatagcttaaccaaggtcctgggttcgaattcaaccttgggcatgcagcagcg-taaaactcttagg 993834  T
Q  427 gagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacc 498  Q
    |||| | |||| ||||||||||||| ||||| ||  | |||||||| ||||| |||||||| ||||||||||    
T  993835 gagaacttgccgcccatttgggtcctacaatactgaatggattagtttccgccgttgcgcgtggaggatacc 993906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 326 - 494
Target Start/End: Complemental strand, 7020518 - 7020352
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    ||||||||  ||||||||||| | |||||||||||||||||||||||||||| ||  ||||||| ||   || ||||||||||| |||||||| ||||||    
T  7020518 ccaagagcgtttagatgagattgcacgggtctcttctagcttaaccaaggtcttgaattcgaattcaat-ttaggcatgcagcaatgttaaaa-tcttag 7020421  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggagga 494  Q
    ||||| | |||| ||||||||||||| |||||||||||| ||||||||||  |||||||||||||||||    
T  7020420 ggagaacttgccgcccatttgggtcctacaatgctcgagtgattagtctcgacagttgcgcgcggagga 7020352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 324 - 481
Target Start/End: Complemental strand, 44752356 - 44752199
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||| || |||||||||||||  ||  ||||||||||||||||||||  |||| |||||||||| || |||||||||||| ||  ||||||||||||    
T  44752356 acccaagtgcgcttagatgagatgatacaagtctcttctagcttaaccaaactcctaggttcgaatcaagtcttgggcatgcaacaacgttaaaactctt 44752257  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagt 481  Q
     |||||||| ||||||| |||||||| | ||||| |||||||||||||||||| ||||    
T  44752256 tgggagagcttgccaccaatttgggttctacaatactcgagggattagtctccacagt 44752199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 374 - 513
Target Start/End: Complemental strand, 37180108 - 37179974
Alignment:
Q  374 ggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtc 473  Q
    |||| ||||||||||||||| ||||| |||||| ||||||     |||||||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  37180108 ggtcttgggttcgaatccagtcttggacatgcaacagtgt-----ctcttagggagagtgtgccgcccatttgagtcccacaatactcgagggattagtc 37180014  T
Q  474 tccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    | |||| |||||||||||||||||||| ||||||||||||    
T  37180013 tacgcacttgcgcgcggaggatacccgatttacaccaaaa 37179974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 326 - 448
Target Start/End: Original strand, 7157479 - 7157601
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||| ||| |||||||| ||| ||||| |||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||  ||||||||||||||    
T  7157479 ccaatagcgcttagatgggatagaacgagtctcttctaacttaaccaagatcctaggttcgaatctagccttgggcatgcagcaacgttaaaactcttag 7157578  T
Q  426 ggagagcctgccacccatttggg 448  Q
    |||||||||||| || |||||||    
T  7157579 ggagagcctgccgcctatttggg 7157601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 19956008 - 19955916
Alignment:
Q  234 ctgtaatttaaccagttttatttatttttccctaagcaaacaatttatttatggaagtacaaggagacgtattcacaaagagattatttaacc 326  Q
    |||||||||||||| |||||||||||||||| || |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19956008 ctgtaatttaaccatttttatttatttttccataggcaaaggatttatttatggaagtacaaggagacgtattcccaaagagattatttaacc 19955916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 354 - 500
Target Start/End: Complemental strand, 38373124 - 38372980
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    ||||||| ||||||||||||   |||||||||||||||| ||||  ||||||||||| | ||||||||||||| ||||| |||| ||||  |||||||||    
T  38373124 gtctcttatagcttaaccaaatccctgggttcgaatccaaccttatgcatgcagcagcggtaaaactcttaggaagagcttgccgccca--tgggtccca 38373027  T
Q  454 caatgctcgagggattagtctccgcagttgcgcgcggaggatacccg 500  Q
    |||||||| ||| ||||||||   |||||||||||||||||||||||    
T  38373026 caatgctcaaggaattagtctatacagttgcgcgcggaggatacccg 38372980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 802 - 933
Target Start/End: Original strand, 20257504 - 20257637
Alignment:
Q  802 aacctaattgatttgttttttagaaaaaggctgg-taatagatttcatcacttatttttaacacacgttttc-tattcttgtttgaattggaatttgtac 899  Q
    ||||||||  ||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||  | |||||||||||| | ||||||| ||    
T  20257504 aacctaatctatttgttttttagaaaaagactgggtaatagatttaatcacttatttttaaaacacgttttggttttcttgtttgaaatagaatttgcac 20257603  T
Q  900 aagtctttcttttttggataattgacaaatatga 933  Q
    |||||||| |||||||||||||||| ||| ||||    
T  20257604 aagtctttattttttggataattgataaaaatga 20257637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 422 - 505
Target Start/End: Original strand, 25423821 - 25423904
Alignment:
Q  422 ttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  25423821 ttagggagaacctgccgcccatttgggtcccacaatgctcgagggattagtctcagcagttgcgcgtggaggatacccgattta 25423904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 323 - 410
Target Start/End: Original strand, 28365927 - 28366014
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcag 410  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| || |||||||| ||||||||||||||||||||    
T  28365927 aacccaagagcgcttagatgagatggaacgcgtctcttctaacttaaccaaggtcgtgagttcgaatgcagccttgggcatgcagcag 28366014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 440 - 513
Target Start/End: Complemental strand, 37092241 - 37092168
Alignment:
Q  440 ccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  37092241 ccatttgggtcccacagtgctcgagggattagtctccgcagttgtgcacggaggatacccggtttacaccaaaa 37092168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 324 - 470
Target Start/End: Original strand, 33756956 - 33757102
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||| |||||||||||||||  |||||||||||||||||||| |||||| ||  |||||||| |||||||| |||| ||  || ||||||||||||    
T  33756956 acccaagaacacttagatgagatgacacgggtctcttctagcttaatcaaggttcttagttcgaattcagccttgagcatacaatagcgttaaaactctt 33757055  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggatta 470  Q
    ||| ||||| || | | ||||||  || ||||||||| |||||||||    
T  33757056 aggaagagcttgtcgctcatttgaatcgcacaatgcttgagggatta 33757102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 802 - 933
Target Start/End: Original strand, 20246933 - 20247065
Alignment:
Q  802 aacctaattgatttgttttttagaaaaaggctgg-taatagatttcatcacttatttttaacacacgttttc-tattcttgtttgaattggaatttgtac 899  Q
    ||||||||  ||||||||||||||||| | |||| |||||||||| |||||| ||||||||||||||| ||| | |||||||||||| || |||||| ||    
T  20246933 aacctaatctatttgttttttagaaaa-gtctgggtaatagatttaatcactcatttttaacacacgtattcgttttcttgtttgaaatgaaatttgcac 20247031  T
Q  900 aagtctttcttttttggataattgacaaatatga 933  Q
    |||||||| |||||||||||||||| ||| ||||    
T  20247032 aagtctttattttttggataattgataaaaatga 20247065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 329 - 461
Target Start/End: Original strand, 17627543 - 17627675
Alignment:
Q  329 agagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttaggga 428  Q
    ||||| |||||| ||||||  ||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||  ||||||| |||||||||    
T  17627543 agagcgcttagacgagatgacacgcgtctcttctaatttaaccaaggtcctgagttcgaatccagccttgggcatgcaacaacgttaaaattcttaggga 17627642  T
Q  429 gagcctgccacccatttgggtcccacaatgctc 461  Q
     ||  |||  |||||||| ||||||||| ||||    
T  17627643 aagtttgctgcccatttgagtcccacaaggctc 17627675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 322 - 455
Target Start/End: Original strand, 17672608 - 17672741
Alignment:
Q  322 taacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc 421  Q
    |||||| ||||| |||||| ||||||  ||| |||||||| |  ||||||||||||||| ||||||||||| ||||||||||||| ||  ||||||| ||    
T  17672608 taaccctagagcgcttagacgagatgacacgcgtctcttcaaatttaaccaaggtcctgagttcgaatccaaccttgggcatgcaacaacgttaaaattc 17672707  T
Q  422 ttagggagagcctgccacccatttgggtcccaca 455  Q
    ||||||||||  |||  |||||||| ||||||||    
T  17672708 ttagggagagtttgctgcccatttgagtcccaca 17672741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 39401219 - 39401070
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||||||||||  ||| |||| || || |||||||||| || ||| ||||||| ||||||||||||||||| |   |||||||| |||||||||||  |    
T  39401219 ttagatgagatgacacgagtcttttttaacttaaccaagatcttggattcgaattcagccttgggcatgcagtatcattaaaacttttagggagagctcg 39401120  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcg 485  Q
     |  |||||| |||||||||||||||| | |||||| |||||||||||||    
T  39401119 tcgtccatttaggtcccacaatgctcgtgagattagactccgcagttgcg 39401070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 374 - 486
Target Start/End: Original strand, 38743767 - 38743879
Alignment:
Q  374 ggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtc 473  Q
    ||||||| ||| ||||| || |||||||||||||||  ||||||||| || |||||||| |||| | ||||||| || |||||||||  |||||||||||    
T  38743767 ggtcctgagtttgaatctagtcttgggcatgcagcaacgttaaaacttttggggagagcttgccgctcatttggatctcacaatgctttagggattagtc 38743866  T
Q  474 tccgcagttgcgc 486  Q
    |||||||||||||    
T  38743867 tccgcagttgcgc 38743879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 359 - 474
Target Start/End: Complemental strand, 14122009 - 14121894
Alignment:
Q  359 ttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatg 458  Q
    ||||||| |||||| ||||||| ||| |||| ||| ||||  |||||||||  ||||||| |||||| |||| | |||| |||||||| |||||||||||    
T  14122009 ttctagcctaaccagggtcctgagtttgaattcagtcttgaacatgcagcaacgttaaaattcttagagagaacttgccgcccatttgagtcccacaatg 14121910  T
Q  459 ctcgagggattagtct 474  Q
    ||||||||||||||||    
T  14121909 ctcgagggattagtct 14121894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 341 - 499
Target Start/End: Complemental strand, 24413071 - 24412914
Alignment:
Q  341 tgagatggaacgggtctcttctagcttaaccaa-ggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccac 439  Q
    |||||||| ||| ||||||||||| |||| ||| |||| || ||||||||| | |||||  |||||||||  ||||||||||| ||| ||||| ||||||    
T  24413071 tgagatggtacgagtctcttctagtttaagcaaaggtcttgagttcgaatctaaccttga-catgcagcaacgttaaaactctaagg-agagcttgccac 24412974  T
Q  440 ccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggataccc 499  Q
    | ||||| |||||||||| || |||| |||||||||||||||| |||  |||||||||||    
T  24412973 ctatttgagtcccacaatacttgaggaattagtctccgcagttccgctaggaggataccc 24412914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 428 - 513
Target Start/End: Original strand, 14551557 - 14551642
Alignment:
Q  428 agagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||| ||||| || |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| || |||| |||||||    
T  14551557 agagtctgccgcctatttgggtcctacaatgctcgagggattaatctccgcagttgcgcgcagaggatactcgatttataccaaaa 14551642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 323 - 513
Target Start/End: Original strand, 44814812 - 44815006
Alignment:
Q  323 aacccaagagcacttagatgagatgg-aacgggtctcttctagcttaacca-aggtcctgggttcgaatcc-agccttgggcatgcagcagtgttaaaac 419  Q
    ||||||||||||||| |||||||||| || || ||||||| |||||||||| |||||| ||||| |||||| ||||||||| ||||| || ||||||| |    
T  44814812 aacccaagagcacttggatgagatggtaagggatctcttccagcttaaccagaggtcccgggtttgaatccaagccttggg-atgcaacattgttaaatc 44814910  T
Q  420 tctt-agggagagc-ctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||| |||||| ||  |||||||||||  | ||| ||   |||| ||||||||||||| ||||||||| || ||||| |||||||| |||| ||||    
T  44814911 tcttgagggagggctttgccacccattgcgatcctacctggctcaagggattagtctctgcagttgcgagcagaggacacccggttcacactaaaa 44815006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 354 - 498
Target Start/End: Original strand, 38463964 - 38464108
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    |||| ||||| ||||||||| || || | |||||||||||||||||||||||| ||  |||||||||||| | | ||||   ||  | ||||| ||||||    
T  38463964 gtcttttctaacttaaccaaagttctagattcgaatccagccttgggcatgcaacaccgttaaaactcttggagggagctaaccgtctatttgagtccca 38464063  T
Q  454 caatgctcgagggattagtctccgcagttgcgcgcggaggatacc 498  Q
    |||| |||||| |||||||||  ||| ||||||| ||||||||||    
T  38464064 caatactcgagtgattagtctttgcaattgcgcgtggaggatacc 38464108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 461
Target Start/End: Original strand, 17658471 - 17658578
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    ||||||||||  ||||||||| |||||  |||||||| ||||||||||||||| ||  ||||||| ||||||||||||  |||  |||||||| ||||||    
T  17658471 gtctcttctaatttaaccaagatcctgaattcgaatctagccttgggcatgcaacaacgttaaaattcttagggagagtttgctgcccatttgagtccca 17658570  T
Q  454 caatgctc 461  Q
    ||| ||||    
T  17658571 caaggctc 17658578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 434 - 513
Target Start/End: Original strand, 17655750 - 17655831
Alignment:
Q  434 tgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgc--gcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||  ||| |||||||||| | ||||| ||||||    
T  17655750 tgccacccatttggattccacaaggctcgagggattagtctccgcagttgcgtgcgaggaggatacctgatttacgccaaaa 17655831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1132 - 1179
Target Start/End: Complemental strand, 19955311 - 19955264
Alignment:
Q  1132 tcaaaggacacatggcaggtagaaaataggtggggacctttgactagg 1179  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  19955311 tcaaaggacacatggcaggtagaaaataggtgggaacctttgattagg 19955264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 443 - 499
Target Start/End: Original strand, 1682120 - 1682176
Alignment:
Q  443 tttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggataccc 499  Q
    ||||||||| | ||| |||||||||||||||||||||||||||| | ||||||||||    
T  1682120 tttgggtcctataatactcgagggattagtctccgcagttgcgcacagaggataccc 1682176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 431
Target Start/End: Original strand, 24359543 - 24359650
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    ||||||||||| ||||||||| ||| ||  | ||||||||| ||||| ||||||||| |||| |||||||||||||   ||||||||   |||||||| |    
T  24359543 aacccaagagcgcttagatgatatgaaatag-tctcttctaacttaatcaaggtcctaggtttgaatccagccttgataatgcagcaacattaaaacttt 24359641  T
Q  423 tagggagag 431  Q
    |||||||||    
T  24359642 tagggagag 24359650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 481
Target Start/End: Complemental strand, 3772703 - 3772549
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||| |||||||||||||  ||  ||||||||||  ||||||||||||||  |||||||||||  ||||  |||||| || ||||||| ||||||     
T  3772703 ccaagagcgcttagatgagatgacacaagtctcttctaatttaaccaaggtcctaagttcgaatccaatcttgaacatgcaacaatgttaaacctcttac 3772604  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagt 481  Q
    || || | ||||  ||| || |||||||||||   |||| ||||||||| ||||||    
T  3772603 gg-gaacttgccgtccaattaggtcccacaatatccgagagattagtcttcgcagt 3772549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 415 - 497
Target Start/End: Complemental strand, 12233146 - 12233064
Alignment:
Q  415 aaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatac 497  Q
    ||||||||||| |||||  |||| |||||||  ||  ||||||||||||||||||||||||| ||||| |||  |||||||||    
T  12233146 aaaactcttagagagagtttgccgcccatttaagtttcacaatgctcgagggattagtctccacagttacgcttggaggatac 12233064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 19956143 - 19956085
Alignment:
Q  91 aggtaaatcgaaaattgcatatattgttggaggtaaacatatattaaattttgttttag 149  Q
    ||||||||| ||| | || ||||||||||||| ||||||||||||||| ||||||||||    
T  19956143 aggtaaatcaaaattcgcctatattgttggagctaaacatatattaaactttgttttag 19956085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 42905774 - 42905689
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    ||||||||||||   ||| |||||| ||||||||| |||||||| | ||||||||||  ||| | ||||||||||||||||||||||    
T  42905774 ttagatgagatgacgcggatctcttttagcttaactaaggtcctag-ttcgaatccaaactttgtcatgcagcagtgttaaaactct 42905689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 3562242 - 3562181
Alignment:
Q  434 tgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggat 495  Q
    |||| |||||||||||||||||| ||| |||| | |||||| ||||||||||||||| ||||    
T  3562242 tgccgcccatttgggtcccacaaagcttgaggtactagtcttcgcagttgcgcgcggcggat 3562181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 14412789 - 14412874
Alignment:
Q  413 ttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacc 498  Q
    |||||||| ||||||||||| ||   ||||| || |||||| ||||||| ||| ||||||||| ||||||| ||||| ||||||||    
T  14412789 ttaaaacttttagggagagcttgttgcccatctgtgtcccataatgctcaaggaattagtctctgcagttgtgcgcgaaggatacc 14412874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 480 - 513
Target Start/End: Complemental strand, 44732615 - 44732582
Alignment:
Q  480 gttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||||||||||||||||||||||||||||    
T  44732615 gttgcgcgcggaggatacccggtttacaccaaaa 44732582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 471 - 508
Target Start/End: Complemental strand, 45413993 - 45413956
Alignment:
Q  471 gtctccgcagttgcgcgcggaggatacccggtttacac 508  Q
    |||||||||||||||||| |||||||||||||||||||    
T  45413993 gtctccgcagttgcgcgccgaggatacccggtttacac 45413956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 19252654 - 19252590
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaa 388  Q
    ||||||||||  ||||||||||||  ||||||||||| ||||||||||||  ||||| |||||||    
T  19252654 acccaagagcgtttagatgagatgatacgggtctcttttagcttaaccaaactcctgagttcgaa 19252590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 328 - 400
Target Start/End: Complemental strand, 40688888 - 40688817
Alignment:
Q  328 aagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttggg 400  Q
    |||||| ||||| ||||||||||  ||||||||||| ||||||||| |||||| | |||||| ||||||||||    
T  40688888 aagagcgcttaggtgagatggaattggtctcttctaacttaaccaaagtcctgag-tcgaattcagccttggg 40688817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 422 - 512
Target Start/End: Complemental strand, 13835521 - 13835431
Alignment:
Q  422 ttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaa 512  Q
    ||||||||||| ||||   |||||| ||||||||||| | ||||||||||| || ||||||| | | ||||||||||| | |||| |||||    
T  13835521 ttagggagagcttgccgttcatttgagtcccacaatgtttgagggattagtttctgcagttgtgtgtggaggatacccagattacgccaaa 13835431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 382 - 456
Target Start/End: Complemental strand, 13987041 - 13986967
Alignment:
Q  382 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaa 456  Q
    ||||||||||| ||||| |||||||| ||||| |||||| ||||||||||  |||| |  ||||| |||||||||    
T  13987041 gttcgaatccaaccttgagcatgcagtagtgtaaaaacttttagggagagtttgccgcttatttgagtcccacaa 13986967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 382 - 456
Target Start/End: Complemental strand, 13992939 - 13992865
Alignment:
Q  382 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaa 456  Q
    ||||||||||| ||||| |||||||| ||||| |||||| ||||||||||  |||| |  ||||| |||||||||    
T  13992939 gttcgaatccaaccttgagcatgcagtagtgtaaaaacttttagggagagtttgccgcttatttgagtcccacaa 13992865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 409
Target Start/End: Complemental strand, 14757738 - 14757680
Alignment:
Q  351 cgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagca 409  Q
    ||||||||||||| ||||||||||||||| | || |||| || ||||| ||||||||||    
T  14757738 cgggtctcttctaccttaaccaaggtcctagatttgaattcaaccttgtgcatgcagca 14757680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 19956190 - 19956153
Alignment:
Q  18 gacatcagggttcaaaaccaaagaatgttcatattata 55  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  19956190 gacatcagggtccaaaaccaaataatgttcatattata 19956153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 324 - 513
Target Start/End: Complemental strand, 31307228 - 31307039
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31307228 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 31307129  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31307128 agggagagcctgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 31307039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 7e-77
Query Start/End: Original strand, 327 - 505
Target Start/End: Original strand, 38766071 - 38766249
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  38766071 caagagcgcttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggtttgaatccagccttgggcatgcagcagcgttaaaactcttagg 38766170  T
Q  427 gagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38766171 gagagtctgccgcccatttgggtctcacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccgattta 38766249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 324 - 502
Target Start/End: Original strand, 14854584 - 14854762
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  14854584 acccaagagcgcttagatgagatggaacggttctcttctagcttaaccaaggttctgggttcgaatccagccttgggcatgcagcatcgttaaaactctt 14854683  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggt 502  Q
    ||||||||| |||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  14854684 agggagagcttgccgcccatttgggtccaacaattctcgagggattagtctctgcagttgcgcgcggaggatacccggt 14854762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 9e-67
Query Start/End: Original strand, 324 - 513
Target Start/End: Original strand, 35972322 - 35972511
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||||| ||    
T  35972322 acccaagagcgcttagatgagatggaacgggcctcttctagcttaaccaaggtcttgggttcgaatccagccatgggcatacagcagcgttaaaactatt 35972421  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||  |||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  35972422 agggagagtttgccgcccatttgggtcccactatgttcgagggattagtctccgcagttgcgtgcggaggatacctagtttacaccaaaa 35972511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 324 - 513
Target Start/End: Original strand, 45994501 - 45994690
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||    
T  45994501 acccaagagcgtttagatgagatggaacaggtctcttctagcttaaccaaggtcctggattcgaatccagccttgggcatgcaacaacgttaaaactctt 45994600  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||| |||  ||||||||| ||||| |||||||    
T  45994601 agggagagcctgacgcccatttgggtctcacaatgctcgagagattagtctccgcagttgcacgccaaggatacccagtttataccaaaa 45994690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 353 - 513
Target Start/End: Original strand, 46016154 - 46016317
Alignment:
Q  353 ggtctcttctagcttaaccaag---gtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggt 449  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46016154 ggtctcttctagcttaaccaagtaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggt 46016253  T
Q  450 cccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||| | ||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  46016254 cccacaatgctcgaagaattagtctccgtagttgcgcgtggaggatacccgatttacaccaaaa 46016317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 336 - 505
Target Start/End: Complemental strand, 35334248 - 35334079
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||||||||||||||  ||||||||||||||||||||||| || |||||| || |||||||||||||||||||| |||||||||||||| ||||| | |    
T  35334248 ttagatgagatggaacaagtctcttctagcttaaccaaggttcttggttcgtattcagccttgggcatgcagcagagttaaaactcttagagagagtccg 35334149  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||    
T  35334148 ccgcccatttgggtcccacaatactcgagggattagtctccgcagttgcgcgtgaaggatatccggttta 35334079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 375 - 505
Target Start/End: Original strand, 9012300 - 9012430
Alignment:
Q  375 gtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtct 474  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  9012300 gtcctgggttcgaatctagccttgggcatgcagcagtgttcaaactcttagggagagcttgccgcccacttgggtcccacaatgctcgagggattagtct 9012399  T
Q  475 ccgcagttgcgcgcggaggatacccggttta 505  Q
    |||||||||||||||||||||||||| ||||    
T  9012400 ccgcagttgcgcgcggaggatacccgattta 9012430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 346 - 513
Target Start/End: Complemental strand, 46250698 - 46250528
Alignment:
Q  346 tggaacgggtctcttctagcttaaccaag---gtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccaccca 442  Q
    ||||||||| |||||||||||||||||||   ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  46250698 tggaacggggctcttctagcttaaccaagtaggtcctaggttcgaatccagtcttgggcatgcagcagtgttaaaactcttatggaaagcctgccgccca 46250599  T
Q  443 tttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||| |||||||| | |||||||||||| |||| ||| |||||||| |||| |||||||||||    
T  46250598 tttgggtcccacgatgctcgaagaattagtctccgcggttgtgcgtggaggataaccggattacaccaaaa 46250528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 51626410 - 51626285
Alignment:
Q  382 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagt 481  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||| |||||||| ||||||||||||||||    
T  51626410 gttcgaatccagccttgggcatgcagcagtgttaaaacttttagggagagtctgccgtccatttgggtcccacagtgctcgagagattagtctccgcagt 51626311  T
Q  482 tgcgcgcggaggatacccggtttaca 507  Q
    ||||||||||||||||||| ||||||    
T  51626310 tgcgcgcggaggatacccgatttaca 51626285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 324 - 484
Target Start/End: Original strand, 13686580 - 13686741
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  13686580 acccaagagcgcttagatgagatggcatgggtctcttcttgcttaaccaaggtcctgggttcgaatccatccttgggcgtgcagcagcgttaaaactctt 13686679  T
Q  424 -agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgc 484  Q
     ||||||||  ||||  ||||||||||| ||||| ||||||| ||||||||||| |||||||    
T  13686680 aagggagagtttgccgtccatttgggtctcacaaggctcgagagattagtctccacagttgc 13686741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 335 - 501
Target Start/End: Complemental strand, 38844319 - 38844153
Alignment:
Q  335 cttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 434  Q
    |||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||| ||| ||||||||||||||| |||| ||    
T  38844319 cttaaatgagatggaacgagtctcttctagcttaaccaaggtcatgagttcgaatccagctttgggcatgcaacagcgttaaaactcttaggaagagtct 38844220  T
Q  435 gccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccgg 501  Q
    ||| ||||||||   ||||||||||||||| ||||||||||  | ||| ||||| ||||||||||||    
T  38844219 gccgcccatttgacccccacaatgctcgagagattagtctctactgttacgcgcagaggatacccgg 38844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 323 - 505
Target Start/End: Complemental strand, 32005314 - 32005127
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcag-----cagtgttaaa 417  Q
    ||||||||||  ||| ||||||||||||  ||||||||||| ||||||||| |||||| |||||||| |||| |||||||||||      ||||||||||    
T  32005314 aacccaagagagcttggatgagatggaataggtctcttctaacttaaccaaagtcctgagttcgaattcagctttgggcatgcattgcatcagtgttaaa 32005215  T
Q  418 actcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    |||||||||||||| ||||| || |||| | || || |||||||||| |||||||||||||| ||  |||||||||||||||||||||    
T  32005214 actcttagggagagtctgccgcctatttagatctcaaaatgctcgagagattagtctccgcaattatgcgcggaggatacccggttta 32005127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 380 - 491
Target Start/End: Complemental strand, 13948698 - 13948587
Alignment:
Q  380 gggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgca 479  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||  |||||||  || |||||||||||||||||||||||| |||    
T  13948698 gggttcgaatccagccttgggtatgcagcagtgttaaaactcttagggagagtctaccgtccatttgaatctcacaatgctcgagggattagtctctgca 13948599  T
Q  480 gttgcgcgcgga 491  Q
    ||||||||||||    
T  13948598 gttgcgcgcgga 13948587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 22189547 - 22189399
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    |||||||||||||||||||||  | | ||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||   ||||||||||||||    
T  22189547 caagagcacttagatgagatgacatgagtctcttctagcttaaccaaggtccagagttcgaatccaaccttgtgcatgcagcaacattaaaactcttagg 22189448  T
Q  427 gagagcctgccacccatttgggtcccacaatgctcgagggattagtctc 475  Q
     ||||  |||| || || |||||||||||| |||||||| |||||||||    
T  22189447 tagagattgccgcctatatgggtcccacaaggctcgaggaattagtctc 22189399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 340 - 496
Target Start/End: Original strand, 17135092 - 17135247
Alignment:
Q  340 atgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccac 439  Q
    ||||||||  ||| |||||||||||||||| ||| ||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||||  |||| |    
T  17135092 atgagatgacacgtgtctcttctagcttaatcaaagtcctag-ttcgaatccagccttgtgcatgcagcagcgttaaaactcttagggagagtttgccgc 17135190  T
Q  440 ccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggata 496  Q
     |||||| |||||| ||  |||||||||||||||||   |||||||| |||||||||    
T  17135191 gcatttgagtcccagaagactcgagggattagtctcaaaagttgcgcacggaggata 17135247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 326 - 508
Target Start/End: Original strand, 7096077 - 7096258
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||| | |||||||||||||  || ||| ||||||||||||||||||||  |||||| |||| ||| |||| | ||||||||  ||||||||||||||    
T  7096077 ccaagaacgcttagatgagatgacacaggtttcttctagcttaaccaaggttttgggtttgaatacagtcttgagtatgcagcaaagttaaaactcttag 7096176  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 508  Q
    ||||||| | || ||||||| ||||  ||||||||| || ||||||||| | ||||||| |||||| |||||||| |||||||    
T  7096177 ggagagcttaccgcccatttaggtcttacaatgctcaagagattagtctgcacagttgcacgcgga-gatacccgatttacac 7096258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 336 - 494
Target Start/End: Complemental strand, 56447272 - 56447115
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||| ||||||  |||||| |||||||| |||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||  ||    
T  56447272 ttagaagagatgtcacgggtttcttctagtttaaccaaagtcctaggttcgaatccagctatgggcatgcagcagtgttaaaactcttagggagagtttg 56447173  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggagga 494  Q
    | |||||||||| | ||||||  || ||||||||| |||  ||| |||||||| |||||    
T  56447172 ctacccatttggat-ccacaagacttgagggattaatctatgcaattgcgcgcagagga 56447115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 11140436 - 11140540
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| ||||||| ||||   |||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  11140436 acccaagagcgcttagataagataacacggctatcttctagcttaaccaaggtcctggtttcgaatccagccttgggcatgcagcagctttaaaactctt 11140535  T
Q  424 aggga 428  Q
    |||||    
T  11140536 aggga 11140540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 33529325 - 33529409
Alignment:
Q  413 ttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatac 497  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  33529325 ttaaaactcttagggagagcttgccgcccatttgggtcccacaatactggagggattagtctccgcagttgcgcacggaggatac 33529409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 324 - 488
Target Start/End: Complemental strand, 45695970 - 45695806
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||| | |||||||||||| ||||| |||| |||||| || |||||||||||||||| ||||||| ||||| ||||| ||||| ||||||| | ||    
T  45695970 acccaagaacgcttagatgagatagaacgagtcttttctagtttgaccaaggtcctgggtttgaatccaaccttgagcatgtagcagcgttaaaattttt 45695871  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgc 488  Q
    | ||||||| || |  |||||||||| | |||| ||| || ||||||||||  ||||||||||||    
T  45695870 aaggagagcttgtcgtccatttgggttctacaaggcttgatggattagtctatgcagttgcgcgc 45695806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 359 - 505
Target Start/End: Original strand, 14042843 - 14042989
Alignment:
Q  359 ttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatg 458  Q
    ||||| ||||||||| || ||||||||||||| || |||||||||||||| | ||| |||||||| |||||| | || |  |||||||| | ||||||||    
T  14042843 ttctaacttaaccaacgttctgggttcgaatcaagtcttgggcatgcagccgcgtttaaactcttggggagaacatgtcgtccatttggattccacaatg 14042942  T
Q  459 ctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    ||| ||||||| |||||||  ||| ||||| |||||| |||||||||    
T  14042943 ctcaagggatttgtctccgtggttacgcgcagaggatgcccggttta 14042989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 326 - 482
Target Start/End: Complemental strand, 10199264 - 10199111
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||  |||||||||||||||||||||||||| || ||||||||||||| || |||||||||||  |||| |||||  |||| |||||||  ||||     
T  10199264 ccaagagtgcttagatgagatggaacgggtctcttataacttaaccaaggtcttgtgttcgaatcca-acttgagcatgtggcagcgttaaaa--cttaa 10199168  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagtt 482  Q
    ||||||| |||| |||||||  || ||| ||| ||||| ||| ||||||||||||||    
T  10199167 ggagagcttgccgcccatttaagttccataatactcgaaggaatagtctccgcagtt 10199111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 324 - 477
Target Start/End: Original strand, 51853677 - 51853828
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| |||||||||||| ||| | |||||||||| ||||||||| || || ||||||||| ||||||||||||||||||    |||||||||||    
T  51853677 acccaagagcgcttagatgagatagaatgagtctcttctaacttaaccaaagttct-ggttcgaattcagccttgggcatgcagcttccttaaaactctt 51853775  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccg 477  Q
    | ||| ||  |||   |||||| |||| |||||| |||||||||||||||||||    
T  51853776 a-ggaaagtttgcggtccattttggtctcacaatactcgagggattagtctccg 51853828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 368 - 475
Target Start/End: Original strand, 47023425 - 47023532
Alignment:
Q  368 aaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgaggga 467  Q
    |||||||||||| ||||| ||||||| ||| |||||||| ||  ||||||||||||||||||||  || |  |||||||||||||||||  ||||| |||    
T  47023425 aaccaaggtccttggttccaatccagacttaggcatgcaacaaagttaaaactcttagggagagtttgtcgtccatttgggtcccacaagactcgaagga 47023524  T
Q  468 ttagtctc 475  Q
    ||||||||    
T  47023525 ttagtctc 47023532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 443 - 498
Target Start/End: Original strand, 15133473 - 15133528
Alignment:
Q  443 tttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacc 498  Q
    |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||    
T  15133473 tttgggtcccacaatgtttgagagattagtctccgcagttgcgcgcggaggatacc 15133528  T

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Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 18841556 - 18841649
Alignment:
Q  416 aaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgc-agttgcgcgcggaggatacccggtttacac 508  Q
    ||||||||||| ||||  |||| || |||||| ||| |||| |||| |||||||||||||||| |||||||| ||||||||||| |||||||||    
T  18841556 aaactcttaggtagagtttgccgccaatttggatcctacaaggctcaagggattagtctccgcaagttgcgcacggaggatacctggtttacac 18841649  T

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Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 415 - 474
Target Start/End: Complemental strand, 9455624 - 9455565
Alignment:
Q  415 aaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtct 474  Q
    |||||||||||| ||||| |||||| |||||| ||||||||||||||||| |||||||||    
T  9455624 aaaactcttaggaagagcttgccactcatttgagtcccacaatgctcgagagattagtct 9455565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 25768814 - 25768769
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaa 369  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||    
T  25768814 acccaagagcgcttagatgagatggaacgggtctcttctagtttaa 25768769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 412 - 513
Target Start/End: Original strand, 31308364 - 31308465
Alignment:
Q  412 gttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaa 511  Q
    ||||||||||||||| |||| |||||  | |||| |||||||||||| | ||||||||||||  | |||||| | |||||| ||||||  |||||| |||    
T  31308364 gttaaaactcttaggaagagtctgccgtctatttaggtcccacaatgtttgagggattagtcctctcagttgtgtgcggagaatacccaatttacatcaa 31308463  T
Q  512 aa 513  Q
    ||    
T  31308464 aa 31308465  T

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Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 366 - 507
Target Start/End: Original strand, 16994111 - 16994254
Alignment:
Q  366 ttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagg 465  Q
    ||||||||  |||||| |||||||| | ||||| | ||| || ||  |||||||||| | ||||||  |||  ||||||| ||| ||||||  ||||||     
T  16994111 ttaaccaaaatcctggattcgaatctaaccttgagtatgtagtagcattaaaactctaaaggagagtttgctgcccatttaggttccacaagactcgagt 16994210  T
Q  466 gattagtctccgcagttg--cgcgcggaggatacccggtttaca 507  Q
    ||||||||||||||||||  || || ||||||||||| ||||||    
T  16994211 gattagtctccgcagttgcacgtgcagaggatacccgatttaca 16994254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 354 - 486
Target Start/End: Original strand, 22017473 - 22017605
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    |||||||||| ||||| |||  |  ||| ||| ||||||| |||| | ||| |||||||||||||| |||||||| ||| |||| || |||||  || ||    
T  22017473 gtctcttctaacttaatcaaaattttggattcaaatccagtcttgagtatgtagcagtgttaaaacccttagggaaagcttgccgcctatttgaatcaca 22017572  T
Q  454 caatgctcgagggattagtctccgcagttgcgc 486  Q
    ||||| ||||| ||||| ||||  |||||||||    
T  22017573 caatgatcgagcgattaatctctacagttgcgc 22017605  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 48998136 - 48998068
Alignment:
Q  355 tctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||| || ||||| |||||||||| ||||||||| || ||||| |||||| ||| ||||||||||||    
T  48998136 tctcttttaacttaatcaaggtcctgagttcgaatcgagtcttggacatgcatcagcgttaaaactctt 48998068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 425
Target Start/End: Complemental strand, 16547514 - 16547415
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaacc-aaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||| |||| |||||||||| |  | ||||||||||||||||| |||||| || |||| |||||| | |||||  |||| |||||||||| |||||||    
T  16547514 caagagaacttggatgagatggtaatgatctcttctagcttaaccaaaggtcatgagttcaaatccaactttgggattgcaacagtgttaaatctcttag 16547415  T

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Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 434 - 489
Target Start/End: Complemental strand, 25768740 - 25768685
Alignment:
Q  434 tgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcg 489  Q
    |||| ||||||||||| |||||||||| || |||||||||||| || |||||||||    
T  25768740 tgccgcccatttgggtgccacaatgcttgaaggattagtctccacaattgcgcgcg 25768685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 468 - 498
Target Start/End: Complemental strand, 37241394 - 37241364
Alignment:
Q  468 ttagtctccgcagttgcgcgcggaggatacc 498  Q
    |||||||||||||||||||||||||||||||    
T  37241394 ttagtctccgcagttgcgcgcggaggatacc 37241364  T

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Target: chr7 (Bit Score: 185; Significance: 1e-99; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 321 - 513
Target Start/End: Original strand, 29059781 - 29059973
Alignment:
Q  321 ttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaact 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29059781 ttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaact 29059880  T
Q  421 cttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29059881 cttagggagagcctgccgcccatttgggtcccacaatgcttgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 29059973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 8e-89
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 31492097 - 31492271
Alignment:
Q  339 gatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgcca 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31492097 gatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccg 31492196  T
Q  439 cccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31492197 cccatttaggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 31492271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 321 - 505
Target Start/End: Complemental strand, 21747204 - 21747021
Alignment:
Q  321 ttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaact 420  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||| |||| |||||||||    
T  21747204 ttaacccaagagcgtttagatgagatggaacgggtctcttctaacttaaccaaggtcctgggt-cgaatccagctttaggcatgctgcagcgttaaaact 21747106  T
Q  421 cttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||    
T  21747105 cttagggagagcctaccacccatttgggtcccacaatcctcgagggattagtcttcgcagttgtgcgcggaggatacctggttta 21747021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 324 - 509
Target Start/End: Complemental strand, 19477411 - 19477229
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  19477411 acccaagagcgtttagatgagatggaacgggtctcttctagcttaaccaaggttctgggtttgaatccagccttgggcatgcaacagtgttaaaactctt 19477312  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    ||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||| | ||||||||||    
T  19477311 agggagagcttgccggccatttgggtcccacaatgct-gagggattagtctccgcagtt--gcgcggaggatagctggtttacacc 19477229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 320 - 513
Target Start/End: Complemental strand, 8839447 - 8839253
Alignment:
Q  320 tttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaac 419  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8839447 tttaacccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaac 8839348  T
Q  420 tcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcg--cgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||  ||||| || |||| | ||||||||| ||||||||||||||||||||| |||||  |||||| |||||||| |||| |||||||    
T  8839347 tcttagggagaatctgccgcctatttagatcccacaatactcgagggattagtctccgcaattgcgcacgcgga-gatacccgatttataccaaaa 8839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 319 - 513
Target Start/End: Original strand, 28537364 - 28537554
Alignment:
Q  319 atttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaa 418  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||||| ||  |||||||    
T  28537364 attttacccaagagcgcttagatgagatggaacgggtctcttctaacttaatcaaggttttgggttcgaatccagccttgggcatgcaacaacgttaaaa 28537463  T
Q  419 ctcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||||||||||||| |||||||||||||    ||||| ||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  28537464 ctcttagggagagcctgccgcccatttgggtcc----atgcttgagggattagtctccgcagttgcacgcgaaggatacccggtttataccaaaa 28537554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 324 - 470
Target Start/End: Complemental strand, 13254263 - 13254117
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||    
T  13254263 acccaagagcgcttagatgagatggaacgggtctcttctagcttaaccaaggtcctgagttcgaatccagccttaggcatgcagcagcgttgaaactctt 13254164  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggatta 470  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  13254163 agggagagcctgccgcccatttaggtcccacaatgctcgagggatta 13254117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 322 - 507
Target Start/End: Original strand, 46373650 - 46373837
Alignment:
Q  322 taacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc 421  Q
    |||||||||||| |||||||||||||   ||||||||||||||||||| |||| |||||||||||||||||| ||||||||| || ||  ||||||||||    
T  46373650 taacccaagagctcttagatgagatgacgcgggtctcttctagcttaagcaagatcctgggttcgaatccagtcttgggcatacaacatcgttaaaactc 46373749  T
Q  422 ttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagtt--gcgcgcggaggatacccggtttaca 507  Q
     |||||||||| |||| || ||||||||| ||||||||||||| |||||||||  ||||||  ||||||||| |||||||| ||||||    
T  46373750 gtagggagagcttgccgcctatttgggtcacacaatgctcgagagattagtcttggcagtttcgcgcgcggaagatacccgatttaca 46373837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 322 - 505
Target Start/End: Original strand, 35707824 - 35708006
Alignment:
Q  322 taacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc 421  Q
    ||||||||||||  |||||| |||| |||| |||||||||||| ||||||||||| |||| |||||||||| | |||| |||||| ||  ||||||| ||    
T  35707824 taacccaagagcgtttagattagattgaacaggtctcttctagtttaaccaaggttctgg-ttcgaatccaactttggacatgcaacaacgttaaaattc 35707922  T
Q  422 ttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    ||||||||| | |||| ||||||| | ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  35707923 ttagggagaacttgcctcccatttagatcctacaatgctcgagggattagtctctgcagttgcgcgtggaggatacccggttta 35708006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 387 - 513
Target Start/End: Complemental strand, 11486843 - 11486717
Alignment:
Q  387 aatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgc 486  Q
    |||||||||||||||||||| | ||||||||||||||| | ||||| |||| ||||||||||| ||||||||||| || ||||||||||  |||||||||    
T  11486843 aatccagccttgggcatgcatctgtgttaaaactcttaagaagagcttgccgcccatttgggttccacaatgctcaagagattagtctctacagttgcgc 11486744  T
Q  487 gcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||||||||||| ||||    
T  11486743 gcggaggatacccggtttacacaaaaa 11486717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 324 - 456
Target Start/End: Complemental strand, 40099434 - 40099302
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||| |||||  |||||||||||| ||||  |||||||||  |||||||||||    
T  40099434 acccgagagcgcttagatgagatggaacgggtctcttctagcttaactaagatcctgaattcgaatccagctttggatatgcagcagcattaaaactctt 40099335  T
Q  424 agggagagcctgccacccatttgggtcccacaa 456  Q
    ||||||||| |||| |||||||| |||||||||    
T  40099334 agggagagcttgccgcccatttgagtcccacaa 40099302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 327 - 508
Target Start/End: Original strand, 20207480 - 20207660
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    ||||||| |||||||||||||  | || | |||||||||||||| ||| |  ||||||| ||| ||||||| |||||| | ||  ||||||||||||| |    
T  20207480 caagagcgcttagatgagatgatatggatttcttctagcttaactaagatt-tgggttctaattcagccttaggcatgtaacaacgttaaaactcttaag 20207578  T
Q  427 gagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 508  Q
    |||||| |||| | ||||||| ||| |||||||||||||||||||||||||||||||||| | |||||||| ||||||||||    
T  20207579 gagagcttgccgcgcatttggatcctacaatgctcgagggattagtctccgcagttgcgcacagaggatactcggtttacac 20207660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 326 - 505
Target Start/End: Complemental strand, 42741972 - 42741790
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatcc-agccttgggcat----gcagcagtgttaaaact 420  Q
    ||||||||  |||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||   || ||  | |||    |||||||||||||||||    
T  42741972 ccaagagcgtttagatgagatggaacaggtctcttctatcttaaccaatgtcctaggttcgaatattagtctccg-catttgcgcagcagtgttaaaact 42741874  T
Q  421 cttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
     ||||||||| |||||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||||||||||||||| ||||    
T  42741873 tttagggagaacctgccacccatttgggt-ccataatactcgagggattaatctctgcagttgcgcgcggaggatacccgattta 42741790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 27484199 - 27484058
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||||||||||  ||  ||||||||||||||||||||||||||| |||  ||||||||| |||||||||||||| |||||||||||| |||||||| |     
T  27484199 ttagatgagatgacacaagtctcttctagcttaaccaaggtcctgagtttaaatccagccatgggcatgcagcagcgttaaaactcttggggagagcttt 27484100  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccg 477  Q
    ||| | ||||||||| ||| ||||| ||||||||| ||||||    
T  27484099 ccatcgatttgggtctcacgatgcttgagggattaatctccg 27484058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 374 - 502
Target Start/End: Original strand, 24172236 - 24172366
Alignment:
Q  374 ggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct--tagggagagcctgccacccatttgggtcccacaatgctcgagggattag 471  Q
    ||||||||||||||||||| ||||||||||||| ||  |||||||||||  ||| |||||| |||| |||| |||| ||||||||||||||| |||||||    
T  24172236 ggtcctgggttcgaatccaaccttgggcatgcaacaacgttaaaactctcttagtgagagcttgccgcccacttggatcccacaatgctcgaaggattag 24172335  T
Q  472 tctccgcagttgcgcgcggaggatacccggt 502  Q
    |||  |||||||||||||||| |||||||||    
T  24172336 tctatgcagttgcgcgcggagtatacccggt 24172366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 324 - 474
Target Start/End: Complemental strand, 7265475 - 7265325
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||  ||| ||||||||  |||||||||||||||||||||||| ||  |||||||| ||| || ||||||||||||||  |||||||||||||    
T  7265475 acccaagagcgtttatatgagatgacacgggtctcttctagcttaaccaaagttttgggttcggatctagtcttgggcatgcagcgatgttaaaactctt 7265376  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtct 474  Q
    ||||||||  |||  | ||||||||||||||||| |||||  |||||||||    
T  7265375 agggagagtttgctgctcatttgggtcccacaatactcgaatgattagtct 7265325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 326 - 435
Target Start/End: Complemental strand, 2657996 - 2657887
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||| |||||||||||||||||| |||||||||| ||||| ||||| |||| |||| ||| |||||||||||||||||||  |||||||||||||     
T  2657996 ccaagagcgcttagatgagatggaacgagtctcttctaacttaatcaaggccctgagttcaaatacagccttgggcatgcagcaacgttaaaactcttaa 2657897  T
Q  426 ggagagcctg 435  Q
    ||||||||||    
T  2657896 ggagagcctg 2657887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 416 - 513
Target Start/End: Complemental strand, 37339803 - 37339706
Alignment:
Q  416 aaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||| ||||| ||||| || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||    
T  37339803 aaactcttagtgagagtctgccgcctatttgggtcccataatgctcgagggattagtctccgcagttgcgcacggaggatacccgatttataccaaaa 37339706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 402 - 472
Target Start/End: Original strand, 14545000 - 14545070
Alignment:
Q  402 atgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagt 472  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||    
T  14545000 atgcagcagtgttaaaactcttagggagagcctgccgtccatttgggtcccacaatgctcgatggattagt 14545070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 421 - 513
Target Start/End: Original strand, 31776494 - 31776586
Alignment:
Q  421 cttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||||||| ||  ||||||||||||||||||| |||||||||||| ||| |||||||||| |||||||||||| |||||| |||||||    
T  31776494 cttagggagagccagctgcccatttgggtcccacaatactcgagggattaatcttcgcagttgcgggcggaggatacctggtttataccaaaa 31776586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 442 - 513
Target Start/End: Original strand, 28665187 - 28665258
Alignment:
Q  442 atttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  28665187 attttggtcccacaatgctcgagggattagtctccgcagttgcacgcggaggatacccagtttacacaaaaa 28665258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 365 - 513
Target Start/End: Complemental strand, 23933772 - 23933624
Alignment:
Q  365 cttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgag 464  Q
    |||||| |||||||||||||||||||||| |||| || ||||  ||  |||||||| ||||||||||  |||| ||||||| ||| | ||||| || |||    
T  23933772 cttaactaaggtcctgggttcgaatccagtcttgagcttgcaagagcattaaaacttttagggagagtttgccgcccatttaggttcgacaatacttgag 23933673  T
Q  465 ggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||||| ||| |||| | | ||||||||||  ||||||||||||    
T  23933672 ggattagtctctgcaattgcacacagaggatacccaatttacaccaaaa 23933624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 326 - 430
Target Start/End: Complemental strand, 7190519 - 7190415
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    ||||||||  |||||||||||||||    ||||||||||||||||||||||  || ||| |||| |||| ||||||||||||| ||||||||||| ||||    
T  7190519 ccaagagcgtttagatgagatggaataaatctcttctagcttaaccaaggttatgagtttgaattcagcattgggcatgcagccgtgttaaaacttttag 7190420  T
Q  426 ggaga 430  Q
    |||||    
T  7190419 ggaga 7190415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 484
Target Start/End: Complemental strand, 24579584 - 24579456
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    ||||||||||| ||||||||||| ||| |||||||| |||| ||  |||||||||| || |||||| |||||||||||  ||||  |||||||| ||| |    
T  24579584 gtctcttctagtttaaccaaggttctgagttcgaattcagctttacgcatgcagcattgataaaacacttagggagag--tgccgtccatttggatccta 24579487  T
Q  454 caatgctcgagggattagtctccgcagttgc 484  Q
     ||  |||||| |||||||||| ||||||||    
T  24579486 gaagactcgagagattagtctctgcagttgc 24579456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 370 - 513
Target Start/End: Original strand, 45778889 - 45779032
Alignment:
Q  370 ccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggatt 469  Q
    |||| ||| ||||||||||| ||| ||||| ||| || | |||||||| || |||||||  |  || |  || |||| ||| |||||| |||||||||||    
T  45778889 ccaatgtcatgggttcgaattcagtcttggacatacaacggtgttaaagcttttagggattgtttgtcgtccgtttgagtctcacaatactcgagggatt 45778988  T
Q  470 agtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||||||||||   |||||||||| ||||||||||||||    
T  45778989 agtctccgcagttgcgaatggaggatacctggtttacaccaaaa 45779032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 362 - 513
Target Start/End: Original strand, 1424590 - 1424743
Alignment:
Q  362 tagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctc 461  Q
    |||||||||||||||  ||||||||||||||   |||| || |||  |||||||||||||||  |||||| ||      ||||||||||||||||  ||     
T  1424590 tagcttaaccaaggtgttgggttcgaatccattattggacaagcaatagtgttaaaactcttgaggagagtctcttgttcatttgggtcccacaagactt 1424689  T
Q  462 gagggattagtctccgcagttgcgcg--cggaggatacccggtttacaccaaaa 513  Q
    ||| ||||||||||||||||||||||  || |||| ||||| ||||||||||||    
T  1424690 gagagattagtctccgcagttgcgcgcacgaaggacacccgatttacaccaaaa 1424743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 421 - 511
Target Start/End: Complemental strand, 29428857 - 29428767
Alignment:
Q  421 cttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaa 511  Q
    |||||||||||  ||||  |||||||| |||||||||| |||||||||||||||| |||||||||| ||   ||||||||||| |||||||    
T  29428857 cttagggagagtttgccgaccatttggatcccacaatgttcgagggattagtctctgcagttgcgctcgcctgatacccggttgacaccaa 29428767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 413 - 507
Target Start/End: Original strand, 3231287 - 3231381
Alignment:
Q  413 ttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttaca 507  Q
    |||||||| ||||||||||| || |  |||||| |||||||||||| ||||| |||||| |||  ||||||  ||||||||||||||| ||||||    
T  3231287 ttaaaacttttagggagagcttgtcttccatttaggtcccacaatgttcgagagattagactcaccagttgtacgcggaggatacccgatttaca 3231381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 40211965 - 40212039
Alignment:
Q  357 tcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 431  Q
    |||| |||||||| ||||||| ||||||| ||||||| |||||||||||| ||  ||||||||||||||| ||||    
T  40211965 tcttttagcttaatcaaggtcatgggttcaaatccagtcttgggcatgcaacaacgttaaaactcttaggaagag 40212039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 324 - 421
Target Start/End: Original strand, 2371127 - 2371224
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc 421  Q
    |||||||||  |||||||||||||  |||| |||||||||| || || |||||||||  ||||||| ||| ||| || ||||||||| ||||||||||    
T  2371127 acccaagagtgcttagatgagatgacacggttctcttctagattgactaaggtcctgaattcgaattcaggcttaggaatgcagcagcgttaaaactc 2371224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 24512617 - 24512734
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    |||||||| |||  ||||||||||||||| |||||||| ||||||  ||||||| || |||||| ||| || ||  |||||||||||| |||||||  ||    
T  24512617 ttagatgaaatgacacgggtctcttctagtttaaccaatgtcctgaattcgaatacaaccttggacatccaacaacgttaaaactcttggggagagtgtg 24512716  T
Q  436 ccacccatttgggtccca 453  Q
     |  ||||||||||||||    
T  24512717 acgtccatttgggtccca 24512734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 453 - 506
Target Start/End: Complemental strand, 36821113 - 36821060
Alignment:
Q  453 acaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttac 506  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||  |||||||    
T  36821113 acaatgctcgagggattagtctctgcagttgcgcgcagaggatacttggtttac 36821060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 354 - 474
Target Start/End: Complemental strand, 4059824 - 4059705
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    ||||||| ||| |||||||||||| || |||||||| |||||||| ||||||| ||  |||||||||||||| |||||  | ||    ||||||||| ||    
T  4059824 gtctcttttagtttaaccaaggtc-tgagttcgaatacagccttgagcatgcaacatcgttaaaactcttagagagagttttccgtttatttgggtcaca 4059726  T
Q  454 caatgctcgagggattagtct 474  Q
    |||  ||||||||||||||||    
T  4059725 caagactcgagggattagtct 4059705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 5905812 - 5905900
Alignment:
Q  335 cttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||| | || | |||||||   |||||||||||||||  |||||||||||    
T  5905812 cttagatgagatagaacgagtctcttctaacttaaccaacgtcttaggcttgaatccaatattgggcatgcagcagcattaaaactctt 5905900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 434 - 513
Target Start/End: Original strand, 33299168 - 33299247
Alignment:
Q  434 tgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||| |||||||| | ||||||||||  | ||||||||||||||||||  ||| |||| ||||||||||||||| ||||    
T  33299168 tgccatccatttggattccacaatgcttaatggattagtctccgcagttatgcgtggagaatacccggtttacacaaaaa 33299247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 2871104 - 2871038
Alignment:
Q  357 tcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| | |||||| || |||||||||||||    
T  2871104 tcttctaacttaaccaaggttctgggtttgaatccatccttagacatgcaacaatgttaaaactctt 2871038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 356 - 426
Target Start/End: Original strand, 12142637 - 12142707
Alignment:
Q  356 ctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    |||||||| ||||||||| ||||| ||||||||| | | | |||||||||||||  |||||||||||||||    
T  12142637 ctcttctaacttaaccaaagtccttggttcgaattcggtcatgggcatgcagcatcgttaaaactcttagg 12142707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 354 - 476
Target Start/End: Complemental strand, 37900503 - 37900381
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    ||||||| ||| |||||||| ||| ||||||| |||| | |||| | ||||||||| ||||||||||||| || ||||  |  |  | ||||||||||||    
T  37900503 gtctcttttagtttaaccaaagtcatgggttcaaatcaaaccttagacatgcagcaatgttaaaactcttgggaagagtttatcgtcaatttgggtccca 37900404  T
Q  454 caatgctcgagggattagtctcc 476  Q
    ||| |||||| |||||| |||||    
T  37900403 caaagctcgatggattaatctcc 37900381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 354 - 476
Target Start/End: Complemental strand, 37907014 - 37906892
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    ||||||| ||| |||||||| ||| ||||||| |||| | |||| | ||||||||| ||||||||||||| || ||||  |  |  | ||||||||||||    
T  37907014 gtctcttttagtttaaccaaagtcatgggttcaaatcaaaccttagacatgcagcaatgttaaaactcttgggaagagtttatcgtcaatttgggtccca 37906915  T
Q  454 caatgctcgagggattagtctcc 476  Q
    ||| |||||| |||||| |||||    
T  37906914 caaagctcgatggattaatctcc 37906892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 415 - 505
Target Start/End: Original strand, 32469986 - 32470078
Alignment:
Q  415 aaaactcttagggagagcctgccacccatttgggtcccacaat--gctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    |||||| ||||||||| | ||||  ||||||||||| ||||||  ||||||| ||||||| | ||||||||| ||||||||||| | ||||||    
T  32469986 aaaacttttagggagaacttgccgtccatttgggtctcacaatatgctcgagagattagtgttcgcagttgcacgcggaggatatctggttta 32470078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 32469921 - 32469981
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagcct 396  Q
    ||||||||||||||||| |||||||||||||||| |||| |  || ||||||||| |||||    
T  32469921 ttagatgagatggaacgagtctcttctagcttaatcaagattttgagttcgaatcaagcct 32469981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 28828811 - 28828756
Alignment:
Q  440 ccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggat 495  Q
    ||||||||||| ||||| |||| | |||||||||| ||||||||| ||||||||||    
T  28828811 ccatttgggtctcacaaggctcaatggattagtctgcgcagttgctcgcggaggat 28828756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 14552482 - 14552527
Alignment:
Q  467 attagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||    
T  14552482 attagtctccgcagttgcgcgcagaggataccc-gtttacacaaaaa 14552527  T

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Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 485
Target Start/End: Complemental strand, 30614772 - 30614683
Alignment:
Q  396 ttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcg 485  Q
    ||||||||||| ||| |||||||||||||| |||||  || | | ||||| |||| || || ||| |||| ||||||||| |||||||||    
T  30614772 ttgggcatgcatcagcgttaaaactcttagagagagtttgtcgctcatttaggtctcagaaagcttgaggaattagtctcggcagttgcg 30614683  T

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Target: chr8 (Bit Score: 172; Significance: 8e-92; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 8e-92
Query Start/End: Original strand, 322 - 513
Target Start/End: Complemental strand, 4125188 - 4124997
Alignment:
Q  322 taacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  4125188 taacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaatgtcctgggttcgaatcaagccttgggcatgcagcactgttaaaactc 4125089  T
Q  422 ttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4125088 ttagggagagcctgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccgatttacaccaaaa 4124997  T

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Target: chr8; HSP #2
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 324 - 513
Target Start/End: Original strand, 2743912 - 2744101
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2743912 acccaagagcatttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 2744011  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||| || |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2744012 agggagagcatgtcgtccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 2744101  T

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Target: chr8; HSP #3
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 324 - 513
Target Start/End: Original strand, 30935983 - 30936172
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||  ||||||||||||    
T  30935983 acccaagagcacttagatgagatggaacgggtctcttctaacttaaccaaggtcctgagttcgaatccagccttaagcatgcagcaacgttaaaactctt 30936082  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  30936083 agggagagcctgccgcccatttgggtccgacaatgttcgagggattagtctccgcagttgcgcgcggatgttacccggtttataccaaaa 30936172  T

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Target: chr8; HSP #4
Raw Score: 138; E-Value: 2e-71
Query Start/End: Original strand, 336 - 509
Target Start/End: Complemental strand, 13468895 - 13468722
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||    
T  13468895 ttagattagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgtagcagcgttaaaactcttagagagagtctg 13468796  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    || |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  13468795 ccgcccatttgagtcccacaatgctcgaaggattagtctccgcagttgcgcacggaggatacccggtttacacc 13468722  T

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Target: chr8; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 330 - 513
Target Start/End: Complemental strand, 19715882 - 19715698
Alignment:
Q  330 gagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggag 429  Q
    |||| |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19715882 gagcgcttagatgagatggaacatgtcttttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactctcagggag 19715783  T
Q  430 agcctgccacccatttgggtcccacaatgctcga-gggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  19715782 agcttgccgcccatttgggtcccacaatgctcgaggggattagtctccgcagttgcgcgcggagaatacctggtttacacaaaaa 19715698  T

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Target: chr8; HSP #6
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 324 - 494
Target Start/End: Complemental strand, 12958247 - 12958077
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||||    
T  12958247 acccaagagtgcttagatgagatggaactagtctcttctagcttaaccaaggtcatgggtttgaatccagcattgggcatgcagcagcgttaaaactctt 12958148  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggagga 494  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12958147 agggagagcctgtcgcccatttgggtcccacaatgctcgagggattagtctccgcagtagcgcgcggagga 12958077  T

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Target: chr8; HSP #7
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 324 - 513
Target Start/End: Complemental strand, 36994662 - 36994471
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| ||||||| |||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  36994662 acccaagagcgcttagataagatggcacatgtctcttctagtttaaccaaggtcctgggttcgaatccagccttggacatgcagcagcgttaaaactctt 36994563  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttg--cgcgcggaggatacccggtttacaccaaaa 513  Q
    | ||||||  |||  |||||||||||||||||| |||||||||||||||||| |||||||  || || | ||||||||||||||| ||||||    
T  36994562 aaggagagtttgctgcccatttgggtcccacaaggctcgagggattagtctctgcagttgcacgtgcagtggatacccggtttacgccaaaa 36994471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 344 - 475
Target Start/End: Original strand, 15682928 - 15683059
Alignment:
Q  344 gatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccat 443  Q
    ||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  15682928 gatggaacgagtctcttctagcttaatcaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactcttagggagagcctgccgcccat 15683027  T
Q  444 ttgggtcccacaatgctcgagggattagtctc 475  Q
    || |||||||||||||||||||||||| ||||    
T  15683028 ttaggtcccacaatgctcgagggattaatctc 15683059  T

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Target: chr8; HSP #9
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 336 - 496
Target Start/End: Complemental strand, 30056151 - 30055991
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||||||||||||||  ||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  30056151 ttagatgagatggaacatgtctcttctagcttaacgaaggtcatgggttcaaatccagccttaggcatgcagcagcattaaaactcttagggagagcctg 30056052  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggata 496  Q
    ||  |||||||||| |||||||||||||||||||||||||   ||||||| |||| |||||    
T  30056051 ccgtccatttgggttccacaatgctcgagggattagtctctttagttgcgtgcgggggata 30055991  T

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Target: chr8; HSP #10
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 396 - 501
Target Start/End: Complemental strand, 7839343 - 7839238
Alignment:
Q  396 ttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggat 495  Q
    |||||||||||||||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7839343 ttgggcatgcagcagctttaaaactcttagggagagcatgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggat 7839244  T
Q  496 acccgg 501  Q
    ||||||    
T  7839243 acccgg 7839238  T

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Target: chr8; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 335 - 459
Target Start/End: Original strand, 35206990 - 35207114
Alignment:
Q  335 cttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 434  Q
    ||||||||||||| ||| ||||||||||| |||||||||| | ||||||||||||  | |||||| |||||||||| ||||||||||||| ||| ||| |    
T  35206990 cttagatgagatgaaacaggtctcttctaacttaaccaagattctgggttcgaatttaaccttggacatgcagcagcgttaaaactcttaaggaaagcat 35207089  T
Q  435 gccacccatttgggtcccacaatgc 459  Q
    | |  ||||||||||||||||||||    
T  35207090 gtcgtccatttgggtcccacaatgc 35207114  T

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Target: chr8; HSP #12
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 381 - 505
Target Start/End: Original strand, 24988530 - 24988659
Alignment:
Q  381 ggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggag-----agcctgccacccatttgggtcccacaatgctcgagggattagtctc 475  Q
    |||| ||||||||||||||||||||||||||| |||||||||| |||||     ||| |||| | |||||| |||||||||| |||||||||||||||||    
T  24988530 ggtttgaatccagccttgggcatgcagcagtgctaaaactcttggggaggggatagcttgccgctcatttgagtcccacaatactcgagggattagtctc 24988629  T
Q  476 cgcagttgcgcgcggaggatacccggttta 505  Q
    |||| ||||||   |||||||||| |||||    
T  24988630 cgcaattgcgcattgaggatacccagttta 24988659  T

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Target: chr8; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 16701513 - 16701353
Alignment:
Q  352 gggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcc 451  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||| ||| ||| ||  ||||| |||||||||||||  ||   |||||||| ||||    
T  16701513 gggtctcttctatcttaactaaggttctgggttcgaatccagccttggacatacagtagctttaaacctcttagggagagtttgtagcccatttgagtcc 16701414  T
Q  452 cacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||   ||||| ||||||||||||||  | || | ||||||||| |||||||||| ||||    
T  16701413 cacaagattcgagagattagtctccgcaagt-cgtgaggaggatacacggtttacacaaaaa 16701353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 448 - 509
Target Start/End: Original strand, 39086855 - 39086916
Alignment:
Q  448 gtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  39086855 gtcccacaatgctcgagggattagtctccgcagttgcacgcggaggatacctggtttacacc 39086916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 327 - 479
Target Start/End: Complemental strand, 23981632 - 23981478
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    ||||||| ||||||| |||||  ||| ||||||| ||||||||| | ||| |||| ||||||| |||| |||| ||||||| |  ||||||||||||||     
T  23981632 caagagcgcttagatcagatgacacgagtctcttttagcttaactagggttctggattcgaattcagctttggacatgcaggaacgttaaaactcttaga 23981533  T
Q  427 g--agagcctgccacccatttgggtcccacaatgctcgagggattagtctccgca 479  Q
    |  ||||  |||||||||||||||||  |||| |||||||| |||||||||||||    
T  23981532 gaaagagtttgccacccatttgggtcgtacaaggctcgaggaattagtctccgca 23981478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 337 - 432
Target Start/End: Complemental strand, 27121899 - 27121804
Alignment:
Q  337 tagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagc 432  Q
    ||||||||||   |||||||||||||||||||||||| || ||||||||||||||||| ||  ||||||| ||||||||||||| ||||| |||||    
T  27121899 tagatgagataacacgggtctcttctagcttaaccaaagttctgggttcgaatccagctttaagcatgcaacagtgttaaaacttttaggaagagc 27121804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 439 - 513
Target Start/End: Original strand, 8521792 - 8521865
Alignment:
Q  439 cccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||    
T  8521792 cccatttgagtcccacaatgctcgagggattagtatcc-cagttgcgcgcggaagatacccgatttacaccaaaa 8521865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 39086797 - 39086853
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctg 380  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  39086797 acccaagagcgcttagatgagatggaacgggcctcttctagcttaaccaaggtcctg 39086853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 326 - 398
Target Start/End: Original strand, 44705653 - 44705725
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttg 398  Q
    ||||||||  ||||||| |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  44705653 ccaagagcgtttagatgggatggaacaggtctcttctagtttaaccaaggtcttgggttcgaatccagccttg 44705725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 503
Target Start/End: Original strand, 28377629 - 28377815
Alignment:
Q  316 attatttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgtta 415  Q
    ||||||| | |||||||| |||| |||||||   ||| || |||| |||||||| ||| ||| || ||||||||||||| || |||||||||||   |||    
T  28377629 attatttgatccaagagcgcttacatgagataacacgagtttcttttagcttaatcaaagtcatgagttcgaatccagcattaggcatgcagcaacatta 28377728  T
Q  416 aaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtt 503  Q
    ||| ||||||||||||  ||||  | |||| | | | |||||||||| ||||||||||||  ||||| ||||||||| ||| ||||||    
T  28377729 aaattcttagggagagtttgccgtctattt-gatgcgacaatgctcgcgggattagtctcatcagttacgcgcggagtatatccggtt 28377815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 505
Target Start/End: Original strand, 44638992 - 44639143
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    |||||||||| ||||| ||||||||||  || ||||||| ||||| ||||||| ||  ||||||||||||||||||||  |||| | |||||| | ||||    
T  44638992 gtctcttctaacttaatcaaggtcctgaatttgaatccaaccttgagcatgcaacaacgttaaaactcttagggagagtttgccgcacatttgagcccca 44639091  T
Q  454 caatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    |||| || | | |||||||||   || ||||  ||||| |||||||||||||    
T  44639092 caatacttgggagattagtctttacaattgcatgcggatgatacccggttta 44639143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 350 - 474
Target Start/End: Original strand, 21032302 - 21032425
Alignment:
Q  350 acgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggt 449  Q
    ||||||||||| || |||||||||  || | ||||| ||||||||||| ||||||||| || ||| ||||| ||||||||||  |||| |  ||||| ||    
T  21032302 acgggtctcttgtaacttaaccaatatcataggttcaaatccagcctttggcatgcag-agcgtttaaactattagggagagtttgccgcttatttgagt 21032400  T
Q  450 cccacaatgctcgagggattagtct 474  Q
     | ||||||||||||||||||||||    
T  21032401 actacaatgctcgagggattagtct 21032425  T

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Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 32422923 - 32422808
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggca-tgcagcagtgttaaaactcttagggagagcct 434  Q
    ||||||||||||  ||  |||||||| | |||||||||| ||||||  |||||| ||  |||||||| |||||||||||||||||| || ||||||   |    
T  32422923 ttagatgagatgacacaagtctcttcaaccttaaccaagatcctggaatcgaattcaatcttgggcaatgcagcagtgttaaaactttttgggagaaatt 32422824  T
Q  435 gccacccatttgggtc 450  Q
    ||| ||||||||||||    
T  32422823 gccgcccatttgggtc 32422808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 445
Target Start/End: Original strand, 10030944 - 10031058
Alignment:
Q  331 agcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggaga 430  Q
    |||| |||||| ||||| |||| || ||||||| |||||||||  | ||| |||||||||  || |||| ||| || ||  |||||||||||||||||||    
T  10030944 agcatttagataagatgaaacgagtttcttctaacttaaccaaaattctgagttcgaatcttgcattggacatccaacaacgttaaaactcttagggaga 10031043  T
Q  431 gcctgccacccattt 445  Q
    || |||| |||||||    
T  10031044 gcttgccgcccattt 10031058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 324 - 402
Target Start/End: Complemental strand, 13005831 - 13005753
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggca 402  Q
    |||||||||| ||||| |||||||  ||  ||||||||||||||| |||||||| ||||||  ||||||||||| ||||    
T  13005831 acccaagagcgcttagctgagatgtcacatgtctcttctagcttatccaaggtcttgggtttaaatccagccttcggca 13005753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 4321633 - 4321558
Alignment:
Q  357 tcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagc 432  Q
    |||||||||||||  ||||| ||||||| |||||||| ||| | ||||||  |  |||||||||||||||||||||    
T  4321633 tcttctagcttaagtaaggttctgggtttgaatccagtcttagacatgcaataacgttaaaactcttagggagagc 4321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 8034203 - 8034152
Alignment:
Q  412 gttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcga 463  Q
    ||||||||||||||||||||| |||   |||||||||||||||||| |||||    
T  8034203 gttaaaactcttagggagagcttgcagtccatttgggtcccacaatactcga 8034152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 442 - 499
Target Start/End: Original strand, 40320193 - 40320250
Alignment:
Q  442 atttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggataccc 499  Q
    |||||| |||||| ||||||||| |||||||||| | |||||  ||||||||||||||    
T  40320193 atttggatcccacgatgctcgagagattagtctctgtagttgtacgcggaggataccc 40320250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 8e-89; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 8e-89
Query Start/End: Original strand, 323 - 513
Target Start/End: Original strand, 10591905 - 10592095
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10591905 aacccaagagcacttagatgagatggaacgggtctcttctagattaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 10592004  T
Q  423 tagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  10592005 tagggagagtctgccgcccatttgagtcccacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccgatttacaccaaaa 10592095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 336 - 513
Target Start/End: Original strand, 31113325 - 31113502
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    |||||||||||| ||||||||| || ||||||||  ||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  31113325 ttagatgagatgaaacgggtcttttttagcttaattaaggttctaggttcgaattcagccttgggcatgcagcagtgttaaaactcttagggagagccta 31113424  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  31113425 ccgcccatttggatcccacaatactcgagggattagtctccgcagttgcgcgcgaaggatacccgatttacacaaaaa 31113502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 386 - 513
Target Start/End: Complemental strand, 5123598 - 5123471
Alignment:
Q  386 gaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcg 485  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5123598 gaattcagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcg 5123499  T
Q  486 cgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||| |||||||||||||    
T  5123498 cgcggaggataccctgtttacaccaaaa 5123471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 324 - 505
Target Start/End: Complemental strand, 30785148 - 30784967
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||| |||| |||||||||  ||||||||||||    
T  30785148 acccaagagcatttagatgagatggaacgagtctcttctagcttaatcaatgtcttgggttcgaatccagctttggacatgcagcaacgttaaaactctt 30785049  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    |||||||  |||||| |||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  30785048 agggagaatctgccatccatttaggtctcacaatgttcaagggattagtctccgcagttgcgcgcggaggatacctggttta 30784967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 335 - 513
Target Start/End: Complemental strand, 22188147 - 22187971
Alignment:
Q  335 cttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 434  Q
    |||||||||||| |||||  ||||||||| ||||||||||||  |||||| |||||||||||||||||| || ||| ||||||||||||  |||||| ||    
T  22188147 cttagatgagattgaacgaatctcttctaacttaaccaaggtattgggtttgaatccagccttgggcatacaacagcgttaaaactctt--ggagagtct 22188050  T
Q  435 gccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||| || |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22188049 gccgcctatttgggtcccacaatactagagggattagtctccgcagttgcgcgcggaggatacccggcttacaccaaaa 22187971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 327 - 474
Target Start/End: Complemental strand, 18909457 - 18909313
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    ||||||| |||||||||||| ||||||||   ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  18909457 caagagcgcttagatgagatagaacgggt---ttctagcttaatcaaggtcctaggttcgaatccagccttgggtatgcagcagtgttaaaactcttagg 18909361  T
Q  427 gagagcctgccacccatttgggtcccacaatgctcgagggattagtct 474  Q
    ||||   |||| | ||||||  ||||||||||||||||||||||||||    
T  18909360 gagaatttgccgctcatttgaatcccacaatgctcgagggattagtct 18909313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 323 - 481
Target Start/End: Complemental strand, 2798477 - 2798320
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    |||||||||||| |||||||||||| ||||| | |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||| |    
T  2798477 aacccaagagcagttagatgagatgaaacggtt-tcttctagcttaaccaaggttctgggttcgaatccaaccttgagcatgcagcagcgttaaaacttt 2798379  T
Q  423 tagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagt 481  Q
    |||||||||| | || ||||||||| | | ||||||||| || ||||| |||| |||||    
T  2798378 tagggagagcttaccgcccatttggtttctacaatgctctagagattaatctctgcagt 2798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 28023605 - 28023494
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||||  || |||||||||||| ||    
T  28023605 acccaagagcgcttagatgagatggaacggatctcttctagcttaaccaatgtcctgagttcgaatccagccttaggcatatagtagtgttaaaactttt 28023506  T
Q  424 agggagagcctg 435  Q
    ||||||||||||    
T  28023505 agggagagcctg 28023494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 323 - 481
Target Start/End: Complemental strand, 2804644 - 2804487
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    |||||||||||| |||||||||||| ||||| | ||||||||||||||||||||  |||||||||||||| ||||| ||||||||||| ||||||||| |    
T  2804644 aacccaagagcagttagatgagatgaaacggtt-tcttctagcttaaccaaggttttgggttcgaatccaaccttgagcatgcagcagcgttaaaacttt 2804546  T
Q  423 tagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagt 481  Q
    |||||||||| | || ||||||||| | | ||||||||| || ||||| |||| |||||    
T  2804545 tagggagagcttaccgcccatttggtttctacaatgctctagagattaatctctgcagt 2804487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 340 - 513
Target Start/End: Original strand, 12682630 - 12682803
Alignment:
Q  340 atgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccac 439  Q
    |||||||| |||| |||||||||||||||| ||| || ||| ||||||||||||||||| ||||||| ||  |||||||||||| |||||| | || |      
T  12682630 atgagatgaaacgagtctcttctagcttaagcaatgttctgagttcgaatccagccttgagcatgcaacaacgttaaaactcttcgggagaacttgtcgt 12682729  T
Q  440 ccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
     || |||  |||||| ||  |||||| |||||||| |||||||||||||||||||||| | ||||||| |||||    
T  12682730 tcaattgaatcccaccatattcgaggaattagtcttcgcagttgcgcgcggaggatactcagtttacaacaaaa 12682803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 324 - 496
Target Start/End: Complemental strand, 10795478 - 10795308
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||| | |||||||||||||  |||| |||||||  ||||||||||||||||  |||| ||||||||||| |||||| |||||  ||||||||||     
T  10795478 acccaagaacgcttagatgagatgatacggatctcttc--gcttaaccaaggtcctaagttcaaatccagccttaggcatgaagcagcattaaaactcta 10795381  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggata 496  Q
    | |||||   |||| ||||||||||||||||||   | ||||||||||| | || ||||||||| ||||||||    
T  10795380 aaggagaatgtgccgcccatttgggtcccacaaaatttgagggattagtgttcgtagttgcgcgtggaggata 10795308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 422 - 509
Target Start/End: Original strand, 25983742 - 25983829
Alignment:
Q  422 ttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    ||||||||||| |||| |||||||| |||||| |||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  25983742 ttagggagagcttgccgcccatttgagtcccataatgttcgagtgattagtctccgcagttgcacacggaggatacccggtttacacc 25983829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 363 - 513
Target Start/End: Original strand, 35774603 - 35774753
Alignment:
Q  363 agcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcg 462  Q
    |||||||| || ||| || ||||||||  |||||||| |||||| || ||||||||| |||||||||||| |||| | |||||| ||| |||||| ||||    
T  35774603 agcttaactaaagtcttgagttcgaatttagccttggacatgcaacaatgttaaaacacttagggagagcttgccgcacatttgagtctcacaatactcg 35774702  T
Q  463 agggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    | | |||| ||||| ||||||| |||||| |||||||| || |||||||||    
T  35774703 atgaattaatctcctcagttgcacgcggaagatacccgattcacaccaaaa 35774753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 36212962 - 36213033
Alignment:
Q  411 tgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagtt 482  Q
    |||||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  36212962 tgttaaaactcttagggagagtttgccgcccatttaggtcccacaatgctcgagggattggtctccgcagtt 36213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 412 - 513
Target Start/End: Original strand, 29553606 - 29553707
Alignment:
Q  412 gttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaa 511  Q
    ||||||||||||||||||||  || |  |||||||||||||| ||||||| || |||||||||| ||||||| ||| ||||||||||| | ||||| |||    
T  29553606 gttaaaactcttagggagagtttgtcgtccatttgggtcccagaatgctcaagagattagtctctgcagttgtgcgtggaggatacccagattacaacaa 29553705  T
Q  512 aa 513  Q
    ||    
T  29553706 aa 29553707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 366 - 496
Target Start/End: Complemental strand, 12336148 - 12336018
Alignment:
Q  366 ttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagg 465  Q
    |||||||||||||||| || |||| || | |||||||||||| ||||||||||||||||  ||| || |||    ||||| ||||||||||||||| |      
T  12336148 ttaaccaaggtcctggatttgaattcaacattgggcatgcagtagtgttaaaactcttaatgagggcttgctgttcattttggtcccacaatgctcaaaa 12336049  T
Q  466 gattagtctccgcagttgcgcgcggaggata 496  Q
     |||||| || ||||||||||| ||||||||    
T  12336048 aattagtttctgcagttgcgcgtggaggata 12336018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 401 - 484
Target Start/End: Original strand, 18244640 - 18244723
Alignment:
Q  401 catgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgc 484  Q
    ||||||||||  ||||||||||| ||||||   | |||||||||||||| ||||||| || ||| |||||||||||||||||||    
T  18244640 catgcagcagcattaaaactctttgggagatttttccacccatttgggttccacaatacttgagagattagtctccgcagttgc 18244723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 373808 - 373739
Alignment:
Q  442 atttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaa 511  Q
    |||||||||  |||||| || |||||||| ||||||||||||||| ||||||||||||  ||||||||||    
T  373808 atttgggtcatacaatgttcaagggattaatctccgcagttgcgcacggaggatacccaatttacaccaa 373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 338 - 487
Target Start/End: Complemental strand, 32313253 - 32313105
Alignment:
Q  338 agatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgcc 437  Q
    ||||||||||   |||||||||| || ||||| ||||||| ||| || ||||||| | || |||| |||| |  ||||||||||||| ||||||  |||     
T  32313253 agatgagatgacgcgggtctcttataacttaatcaaggtcttggatttgaatccaactttcggcaagcagaac-gttaaaactcttaaggagagtttgct 32313155  T
Q  438 acccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcg 487  Q
     |||||||  |||| ||||| |||||||||||||||||  ||||||||||    
T  32313154 gcccatttaagtcctacaatactcgagggattagtctctacagttgcgcg 32313105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 354 - 513
Target Start/End: Original strand, 35914431 - 35914590
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    |||||||||| ||||| |||||| || | |||||||||| | ||||||||||| ||  ||| | ||||||||||||||  | ||||||||||   |||||    
T  35914431 gtctcttctaacttaatcaaggttctagattcgaatccaacattgggcatgcaacaacgtt-acactcttagggagagttttccacccatttaaatccca 35914529  T
Q  454 caatgctcgagggattagtctccgc-agttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||  |||||| ||||| ||||  | | |||| |||||||||||| || ||||||||||||    
T  35914530 caagcctcgagtgattaatctctacaaattgcacgcggaggatactcgatttacaccaaaa 35914590  T

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Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 365 - 511
Target Start/End: Original strand, 38951782 - 38951928
Alignment:
Q  365 cttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgag 464  Q
    |||| |||||||||| ||||| ||| || | ||||||||||| ||   |||||| ||| ||||||||| | ||  | |||| |||||||||||||| |||    
T  38951782 cttagccaaggtccttggttcaaattcaactttgggcatgcatcaaccttaaaattctaagggagagcttaccgtcaatttaggtcccacaatgcttgag 38951881  T
Q  465 ggattagtctccgcagttgcgcgcggaggatacccggtttacaccaa 511  Q
     ||||||  | | ||||| | ||| ||||||||||| ||||||||||    
T  38951882 agattagcatacacagttacacgcagaggatacccgatttacaccaa 38951928  T

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Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 354 - 450
Target Start/End: Complemental strand, 12487398 - 12487303
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtc 450  Q
    |||||||||||||||||||| ||| ||  ||| ||| ||||||| | |||||| ||  || |||||| ||||||||||| |||| ||||||||||||    
T  12487398 gtctcttctagcttaaccaatgtcttgccttcaaattcagccttag-catgcaacatcgtcaaaacttttagggagagcttgccgcccatttgggtc 12487303  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 22402074 - 22402132
Alignment:
Q  452 cacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaa 511  Q
    ||||||||||||||||||| |||||||||||||||  ||| ||||| | |||||||||||    
T  22402074 cacaatgctcgagggattaatctccgcagttgcgcatgga-gatacaccgtttacaccaa 22402132  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 424
Target Start/End: Original strand, 23422731 - 23422801
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctta 424  Q
    |||| ||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||||    
T  23422731 gtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 23422801  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 402 - 484
Target Start/End: Complemental strand, 41446736 - 41446654
Alignment:
Q  402 atgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgc 484  Q
    |||||| | ||||||||||||||  |||||  | || | ||||||||||||||||  |||||| ||||||||||||| |||||    
T  41446736 atgcagtaatgttaaaactcttacagagagtttaccgctcatttgggtcccacaagactcgagagattagtctccgctgttgc 41446654  T

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Target: scaffold0182 (Bit Score: 156; Significance: 3e-82; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 346 - 513
Target Start/End: Original strand, 26332 - 26499
Alignment:
Q  346 tggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccattt 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26332 tggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccattt 26431  T
Q  446 gggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26432 gggtcccacaatgttcgagagattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 26499  T

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Target: chr3 (Bit Score: 143; Significance: 2e-74; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 323 - 509
Target Start/End: Complemental strand, 30996128 - 30995942
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||| ||| |||||||||||    
T  30996128 aacccaagagcgcttagatgagatggaacgggtctcttctatcttaaccaaggtcctgggttcgaatccgaccttgggcatgcaacagcgttaaaactct 30996029  T
Q  423 tagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  30996028 tagggagagtctgccgcccatctgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatatctggtttacacc 30995942  T

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Target: chr3; HSP #2
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 324 - 513
Target Start/End: Original strand, 27763702 - 27763889
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  27763702 acccaagagcgcttagatgagatagaacgggtctc--ctagcttaaccaaggtcctgggttcgaatccagccttgggcatacaacagtgttaaaactctt 27763799  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  27763800 agggagagtctgccgtccatttgagtcccacaatgctcgagggattagtctccgcagttgcgcgcagaggatatccggtttacacaaaaa 27763889  T

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Target: chr3; HSP #3
Raw Score: 130; E-Value: 9e-67
Query Start/End: Original strand, 324 - 509
Target Start/End: Original strand, 25224678 - 25224863
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||| ||||||||||||    
T  25224678 acccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatcaagttttgggaatgcagcagcgttaaaactctt 25224777  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    | ||||| | |||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  25224778 aaggagaacttgccgcccatttaggtcccacaatgctcaagggattagtctccgcagttgcacgcggaggatacccggtttacacc 25224863  T

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Target: chr3; HSP #4
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 324 - 509
Target Start/End: Complemental strand, 48204473 - 48204288
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||    
T  48204473 acccaagagtgcttagatgagatggaacgagtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaacgttaaaaccctt 48204374  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    ||||||||| || |  |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  48204373 agggagagcttgtcgtccatttgggttccacaatgctcaagggattagtttccgcagttgcgcgcggaggatacccgatttacacc 48204288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 326 - 507
Target Start/End: Original strand, 38331109 - 38331290
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||||||| | ||| ||||||||||| ||||||||||||||    
T  38331109 ccaagagcgcttagatgagatggatcgggtctcttctaacttaaccaatgtcctgagtttgaatccaactttgagcatgcagcagcgttaaaactcttag 38331208  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttaca 507  Q
     |||||| |||| |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  38331209 agagagcttgccgcccatttgggtcccacaatgtttgagggattagtctccgcagttgcacgcggaggatacccgatttaca 38331290  T

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Target: chr3; HSP #6
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 386 - 513
Target Start/End: Original strand, 20861289 - 20861416
Alignment:
Q  386 gaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcg 485  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| |    
T  20861289 gaatccagcattgggcatgcagcagcgttaaaactcttagggagagcctgccgcccatttgggttccataatgctcgagggattagtctccgcagttgtg 20861388  T
Q  486 cgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||| ||||| |||||||    
T  20861389 cgcggaggatacccagtttataccaaaa 20861416  T

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Target: chr3; HSP #7
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 55123134 - 55123265
Alignment:
Q  382 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagt 481  Q
    ||||||||||||||||||  ||||||||| ||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  55123134 gttcgaatccagccttggaaatgcagcagcgttaaaattcttagggagagcttgctacccatttgggtctcacaatgctcgagggattagtcttcgcagt 55123233  T
Q  482 tgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||||||||||||| | |||| |||||||    
T  55123234 tgcgcgcggaggatacctgatttataccaaaa 55123265  T

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Target: chr3; HSP #8
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 336 - 513
Target Start/End: Original strand, 40294603 - 40294780
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||||||||||  ||| ||||| |||| ||||| |||||||||| ||||||||||||||||||  ||||| || |||||||||||||||||| ||| ||    
T  40294603 ttagatgagatgacacgagtctcctctaccttaatcaaggtcctgagttcgaatccagccttggatatgcaacaatgttaaaactcttagggaaagcttg 40294702  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    || | ||||||  ||||||||| ||||| |||||||||||||||||||||| |  |||||||||| ||||||||||||    
T  40294703 ccgctcatttgaatcccacaatactcgaaggattagtctccgcagttgcgcacaaaggatacccgatttacaccaaaa 40294780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 324 - 482
Target Start/End: Original strand, 14352533 - 14352694
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgg----gcatgcagcagtgttaaaac 419  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||||| |  | |||||||||||||||||||    ||||||||||||||||||||    
T  14352533 acccaagagcgcttagatgagatggaacaagtctcttctagcttaaccaagatattcggttcgaatccagccttggacatgcatgcagcagtgttaaaac 14352632  T
Q  420 tcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagtt 482  Q
    ||||| ||||||| || |  |||||||| | || |||| ||||||||||||||||||||||||    
T  14352633 tcttacggagagcttgtcgtccatttggatacc-caatactcgagggattagtctccgcagtt 14352694  T

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Target: chr3; HSP #10
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 324 - 449
Target Start/End: Original strand, 38088614 - 38088739
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||| |  |||||||||||||| |||||||||||| || ||||||||||||    
T  38088614 acccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggttccaggttcgaatccagctttgggcatgcagtagcgttaaaactctt 38088713  T
Q  424 agggagagcctgccacccatttgggt 449  Q
    ||||||| | |||| || ||||||||    
T  38088714 agggagaacttgccgcctatttgggt 38088739  T

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Target: chr3; HSP #11
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 1642644 - 1642774
Alignment:
Q  383 ttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagtt 482  Q
    |||||||| |||||||  |||||||| ||||||||||| |||||||||| || ||  |||||||||||||||||| || ||||||||||| |||||||||    
T  1642644 ttcgaatctagccttgaacatgcagccgtgttaaaacttttagggagagtctaccgtccatttgggtcccacaatacttgagggattagtttccgcagtt 1642743  T
Q  483 gcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||| ||| ||||||||||||    
T  1642744 gcgcgcggaggatatccgatttacaccaaaa 1642774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 432 - 513
Target Start/End: Original strand, 8757431 - 8757512
Alignment:
Q  432 cctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8757431 cctgccgcctatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 8757512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 347 - 500
Target Start/End: Complemental strand, 48211099 - 48210946
Alignment:
Q  347 ggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttg 446  Q
    ||||||||||||||||| ||||| ||||||  | |||||||||||||||||| ||||||||||  ||||||||||||| ||||||| ||||  | ||||     
T  48211099 ggaacgggtctcttctaacttaatcaaggtttttggttcgaatccagccttgagcatgcagcaacgttaaaactcttatggagagcttgccgtctattta 48211000  T
Q  447 ggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccg 500  Q
    ||||||||||| ||||||| |||  ||||||||||||| |||||| ||||||||    
T  48210999 ggtcccacaatactcgaggaattgatctccgcagttgcacgcggaagatacccg 48210946  T

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Target: chr3; HSP #14
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 326 - 513
Target Start/End: Original strand, 22288216 - 22288403
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||| ||| |||||||||||||  | |  ||||||||| ||||||||| |||||| |||||||| ||||||||  |||||| || |||||||||||||||    
T  22288216 ccaaaagcgcttagatgagatgacatgaatctcttctaacttaaccaaagtcctgagttcgaattcagccttgaacatgcaacaatgttaaaactcttag 22288315  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||| | || |  ||||||| ||  |||||| ||| ||| ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  22288316 ggagaacttgtcgtccatttgagttacacaatactcaaggaattagtctctgcagttgtgcgcggaggatacccggtttacacaaaaa 22288403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 327 - 509
Target Start/End: Original strand, 15283057 - 15283235
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    |||||||  ||||||||||||  ||| |||||||||| |||||| |||||   |||||||||||||| | ||||||||||||| | |||||||||||| |    
T  15283057 caagagcgtttagatgagatgatacgagtctcttctaacttaactaaggt---gggttcgaatccagtcatgggcatgcagca-tcttaaaactcttatg 15283152  T
Q  427 gagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    || ||  |||| |||||||||||||||||||||||||| ||||||||| |  | |||| | ||||||| ||||| ||||||||    
T  15283153 gaaagattgccgcccatttgggtcccacaatgctcgagagattagtcttcataattgcccacggaggagacccgatttacacc 15283235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 368 - 513
Target Start/End: Original strand, 39950235 - 39950380
Alignment:
Q  368 aaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgaggga 467  Q
    |||||||||| |||||| ||||||||  |||| |||||||||| ||||||| | |||||||||  ||| |   ||||||| ||| ||||||||||| |||    
T  39950235 aaccaaggtcttgggttagaatccagttttggacatgcagcagcgttaaaatttttagggagaatctgtcgttcatttggatccgacaatgctcgaagga 39950334  T
Q  468 ttagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||||||  |||||||||||||  |||| |||||||    
T  39950335 ttagtctccgcagttgcatgcggaggatacccaatttataccaaaa 39950380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 327 - 437
Target Start/End: Original strand, 42514586 - 42514698
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagca--gtgttaaaactctta 424  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||| || ||| |||||||||||||| | ||||||||||| ||  | |||||||||||||    
T  42514586 caagagcgcttagatgagatgaaacgtgtctcttctagcttaactaaagtcttgggttcgaatccaactttgggcatgcatcagcgcgttaaaactctta 42514685  T
Q  425 gggagagcctgcc 437  Q
    |||||||| ||||    
T  42514686 gggagagcttgcc 42514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 373 - 506
Target Start/End: Original strand, 11767138 - 11767271
Alignment:
Q  373 aggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagt 472  Q
    |||||||||||||||||| | ||||||||||||| || | |||||||||||||  || || |||| |||||||| ||||||||||  | || ||||||||    
T  11767138 aggtcctgggttcgaatctatccttgggcatgcaacaatattaaaactcttagcaagtgcttgccgcccatttgagtcccacaatatttgaaggattagt 11767237  T
Q  473 ctccgcagttgcgcgcggaggatacccggtttac 506  Q
    || |||| || |||| |||||||||||| |||||    
T  11767238 cttcgcaattacgcgtggaggatacccgatttac 11767271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 357 - 513
Target Start/End: Complemental strand, 43621444 - 43621284
Alignment:
Q  357 tcttctagcttaaccaaggtcct--gggttcgaatccagcctt-gggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccca 453  Q
    |||||||| |||||||||||  |  |||||||||||||  ||| ||| ||||||||  ||||||||| ||||||||||| |||| |||||||  ||| ||    
T  43621444 tcttctagtttaaccaaggttttttgggttcgaatccaaactttgggtatgcagcaacgttaaaacttttagggagagcttgcctcccatttaagtctca 43621345  T
Q  454 caa-tgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||| ||||||||||||||||||| | |||||||||| ||||||||||| || ||| |||||    
T  43621344 caaatgctcgagggattagtctctgtagttgcgcgcagaggatacccgattcacaacaaaa 43621284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 413 - 513
Target Start/End: Original strand, 25739155 - 25739256
Alignment:
Q  413 ttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgca-gttgcgcgcggaggatacccggtttacaccaa 511  Q
    |||||||||||||||||||  | || ||||||||||||||| ||  |||||   ||||||||||||| |||||| |||||||||||||||||||||||||    
T  25739155 ttaaaactcttagggagagttttccgcccatttgggtcccataagactcgataaattagtctccgcaagttgcgtgcggaggatacccggtttacaccaa 25739254  T
Q  512 aa 513  Q
    ||    
T  25739255 aa 25739256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 453 - 509
Target Start/End: Complemental strand, 40318482 - 40318426
Alignment:
Q  453 acaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40318482 acaatgttcgagggattagtctccgcagttgcgcgcggaggatacccgttttacacc 40318426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 352 - 426
Target Start/End: Original strand, 22755651 - 22755725
Alignment:
Q  352 gggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    |||||| |||||| |||||||| || || ||||||||||||||||||||||||||||||  ||||||||||||||    
T  22755651 gggtctattctaggttaaccaaagtactaggttcgaatccagccttgggcatgcagcagcattaaaactcttagg 22755725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 381 - 509
Target Start/End: Original strand, 46725461 - 46725588
Alignment:
Q  381 ggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcag 480  Q
    |||| |||| ||||||||||||| || ||  ||||||||||||||||| ||  |||   |||| ||||||| |||||||| ||||||||||||||  |||    
T  46725461 ggtttgaatgcagccttgggcattcaacaacgttaaaactcttagggatagtttgctgtccatctgggtcc-acaatgcttgagggattagtctcttcag 46725559  T
Q  481 ttgcgcgcggaggatacccggtttacacc 509  Q
    || ||||||||||||||  ||||||||||    
T  46725560 ttacgcgcggaggatacttggtttacacc 46725588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 434 - 513
Target Start/End: Complemental strand, 44941316 - 44941238
Alignment:
Q  434 tgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||| ||||||||| |||||  |||||||||| |||||||||||||||||||||||||||||| || ||||| |||||||    
T  44941316 tgccgcccatttggatcccattatgctcgagg-attagtctccgcagttgcgcgcggaggatatccagtttataccaaaa 44941238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 46604720 - 46604657
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaat 389  Q
    |||||||| |||||||||||||||||| ||||||| || |||||||||||| ||||||||||||    
T  46604720 ccaagagcgcttagatgagatggaacgagtctcttataacttaaccaaggttctgggttcgaat 46604657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 15446028 - 15446127
Alignment:
Q  381 ggttcgaatccagccttgggcat----gcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctcc 476  Q
    |||||||||||||||||||||||    ||||||||||||| | || || ||||||  ||||  ||||||||||| |||||||||||| ||||||||||||    
T  15446028 ggttcgaatccagccttgggcattcgtgcagcagtgttaatattcgtatggagagtttgccgtccatttgggtctcacaatgctcgacggattagtctcc 15446127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 324 - 423
Target Start/End: Original strand, 3765225 - 3765326
Alignment:
Q  324 acccaagagcacttagatgagatggaacggg-tctcttctagcttaacca-aggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc 421  Q
    ||||||||||||||  ||||||||| | ||| ||||||| |||||||||| ||||||||||||||||| || || || | |||||||||||||||| |||    
T  3765225 acccaagagcacttgaatgagatggtaagggatctcttccagcttaaccagaggtcctgggttcgaattcaaccctgagaatgcagcagtgttaaatctc 3765324  T
Q  422 tt 423  Q
    ||    
T  3765325 tt 3765326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 335 - 496
Target Start/End: Complemental strand, 28967333 - 28967177
Alignment:
Q  335 cttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 434  Q
    |||| ||||||||  ||| |||||||||| ||||||||||||| || ||||||||  ||||||| | |||||||| || ||||||||||||  | ||       
T  28967333 cttacatgagatgacacgagtctcttctaacttaaccaaggtcatgtgttcgaattgagccttgtgtatgcagcaatgctaaaactcttagtaacag--- 28967237  T
Q  435 gccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggata 496  Q
      | |||||||| ||||| |||||||||||| |||| |||| ||  ||||||| ||||||||    
T  28967236 --ctcccatttgtgtcccgcaatgctcgaggaattactctcagcttttgcgcgtggaggata 28967177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 381 - 513
Target Start/End: Original strand, 22288557 - 22288689
Alignment:
Q  381 ggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcag 480  Q
    ||||||||| |||| |||  |||||| ||||| |||||||||||| |||| | || |   |||||| ||  | |||| |||||   ||||||||| ||||    
T  22288557 ggttcgaattcagctttgaacatgcaacagtgctaaaactcttagtgagaacttgtcgtacatttgagttactcaatactcgacaaattagtctctgcag 22288656  T
Q  481 ttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||| |||||||||||||||||||||||| ||||    
T  22288657 ttgtgcgcggaggatacccggtttacacaaaaa 22288689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 580 - 645
Target Start/End: Original strand, 45334283 - 45334349
Alignment:
Q  580 accattctaaatttttgattggttcaacatgtgattccccacacgt-aaccatactaagctttcacg 645  Q
    |||||||| |||||||||||||||||| ||| |||| ||||||||| ||| |||||| |||||||||    
T  45334283 accattctcaatttttgattggttcaaaatgggattacccacacgtaaactatactacgctttcacg 45334349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 54877840 - 54877913
Alignment:
Q  352 gggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||||||| ||||||||||||  || ||| |||| ||||||||||||| || ||  ||||||||||||||    
T  54877840 gggtctcttctaacttaaccaaggttttgagtttgaattcagccttgggcatccaacaacgttaaaactcttag 54877913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 20711771 - 20711839
Alignment:
Q  350 acgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaa 418  Q
    ||||||||||| |||||||||||||||||||  || ||| | |||||||||||| ||| || |||||||    
T  20711771 acgggtctcttgtagcttaaccaaggtcctgaatttgaaacaagccttgggcatacagtagcgttaaaa 20711839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 398
Target Start/End: Complemental strand, 2195676 - 2195602
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttg 398  Q
    ||||||||||||||| |||| ||||  || ||||||||||||||||| ||||| ||| ||| |||| ||| ||||    
T  2195676 acccaagagcacttaaatgaaatggtgcgtgtctcttctagcttaactaaggttctgagtttgaattcagtcttg 2195602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 475
Target Start/End: Complemental strand, 21223574 - 21223465
Alignment:
Q  366 ttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagg 465  Q
    ||||||||| | |||| ||| ||| ||| ||| | ||||||| |||||||||| | ||||||||||| || | || |||| | ||||||||||||| ||     
T  21223574 ttaaccaagattctggattcaaattcagtcttagacatgcagtagtgttaaaatttttagggagagcttgtcgcctatttagatcccacaatgctcaaga 21223475  T
Q  466 gattagtctc 475  Q
     |||||||||    
T  21223474 aattagtctc 21223465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 49502602 - 49502655
Alignment:
Q  462 gagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaaga 515  Q
    ||||||||||||||||||||| |||||||| ||||   ||||||||| ||||||    
T  49502602 gagggattagtctccgcagttacgcgcggaagatatttggtttacacaaaaaga 49502655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 2e-67; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 323 - 513
Target Start/End: Original strand, 16756060 - 16756250
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| |||| |||||||||||| || |||||||||||    
T  16756060 aacccaagagcgcttagatgagatggaacggatctcttctagcttaaccaaggttctgggtttgaattcagcattgggcatgcagaagcgttaaaactct 16756159  T
Q  423 tagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||| || |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  16756160 tagggagagcatgtcgtgcatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatactcgatttacaccaaaa 16756250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 324 - 513
Target Start/End: Original strand, 22022099 - 22022288
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||  |||||||||||    
T  22022099 acccaagagcgtttagatgagatggaacaggtctcttctagcttaactaaggttgtgggttcgaatccagccttgggcatgcagcagcattaaaactctt 22022198  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    ||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||||||| || ||||||||||| || ||||| ||||    
T  22022199 agggagaacttgccacccatttgggtcccacaatattcgagggattagtctccgcagttgcacgtggaggatacccagtatacacaaaaa 22022288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 324 - 503
Target Start/End: Original strand, 28724652 - 28724830
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||  ||| |||||| ||||||| ||||||||  |||||| ||||||||||||||||    
T  28724652 acccaagagcgcttagatgagatggaacgagtctcttctagcttaataaag-tcctggattcgaattcagccttgaacatgcaacagtgttaaaactctt 28724750  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtt 503  Q
    ||| |||| |||||  ||||||| |||| |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  28724751 aggaagagtctgccgtccatttgagtcctacaatgttcgagggattagtctccgcaattgcgcgcggaggatacccggtt 28724830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 356 - 508
Target Start/End: Complemental strand, 18428271 - 18428120
Alignment:
Q  356 ctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccaca 455  Q
    ||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||| ||||   |||||| || ||||||    
T  18428271 ctcttgtagcttaaccaaggttctggattcgaatccaaccttgggcatgcagcagtgttaaaacttttagggagagtctgctgtccattt-ggccccaca 18428173  T
Q  456 atgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 508  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  18428172 atgctcgagggattagtctctgcagttgcgcgcggaggatacccgatttacac 18428120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 321 - 513
Target Start/End: Original strand, 45806212 - 45806404
Alignment:
Q  321 ttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaact 420  Q
    |||||||| |||| |||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||| ||||||||    
T  45806212 ttaacccaggagcgcttagatgagatagaacgggtctcttctatcttaaccaaggtcctgagttcgaattcagtcttgggcatgcagcagttttaaaact 45806311  T
Q  421 cttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||| | || || ||||  ||| ||||||  ||||  |||||||||| |||||| |||| |||||||||  ||||||||||||||    
T  45806312 cttagggagagcataccgcctatttaagtctcacaatattcgaatgattagtctctgcagttacgcgtggaggatacatggtttacaccaaaa 45806404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 324 - 504
Target Start/End: Complemental strand, 9781146 - 9780971
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||  ||||||||||| |||||| ||||||     ||||  |||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  9781146 acccaagagcgtttagatgagatagaacggatctctt-----ttaattaaggtcttgagttcgaatccagccttgggcatgcagcagcgttaaaactctt 9781052  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttt 504  Q
    |||||||| | ||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||| ||||    
T  9781051 agggagagtcggccgcccatttgggtcccacaatgctcgagggattagtatccgtagttgggcgcggagaatacccagttt 9780971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 342 - 508
Target Start/End: Original strand, 12035546 - 12035713
Alignment:
Q  342 gagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaa-ctcttagggagagcctgccacc 440  Q
    ||||||||| ||||||||||||| |||||||| ||| | ||||||||||||||||| |||||||| || |||||||| ||||||||||||| ||||| ||    
T  12035546 gagatggaaagggtctcttctagtttaaccaaagtctttggttcgaatccagcctttggcatgcaacattgttaaaaactcttagggagagtctgccgcc 12035645  T
Q  441 catttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 508  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| || ||| ||||| || |||||||    
T  12035646 catttgggtcccacaatgctcgagggattagtctcagcaattgcacgtggatgatactcgatttacac 12035713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 383 - 509
Target Start/End: Original strand, 36806649 - 36806775
Alignment:
Q  383 ttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagtt 482  Q
    ||||||| ||||||||||||| ||| || |||||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  36806649 ttcgaattcagccttgggcatacagtagcgttaaaactcttagggagtgtctgccgcccatttgggttccacaatgctcgagggattagtctctgcagtt 36806748  T
Q  483 gcgcgcggaggatacccggtttacacc 509  Q
    || ||||||||||||||||||||||||    
T  36806749 gcacgcggaggatacccggtttacacc 36806775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 405 - 507
Target Start/End: Complemental strand, 42297523 - 42297421
Alignment:
Q  405 cagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttt 504  Q
    |||||| |||||||||||||||||||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  42297523 cagcagcgttaaaactcttagggagagtctgccgtccatttgggtctcacaatgctcgagggattagtctccgcagttgcgcgcggaggatacctagttt 42297424  T
Q  505 aca 507  Q
    |||    
T  42297423 aca 42297421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 326 - 484
Target Start/End: Original strand, 10840998 - 10841157
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||| ||||||||||||| ||| ||||||||||| |||||||||| |  ||||||| ||| |||||||||||||| | ||  ||||||| ||||||    
T  10840998 ccaagagcgcttagatgagatgaaacaggtctcttctatcttaaccaagattttgggttcaaattcagccttgggcatgtaacaacgttaaaattcttag 10841097  T
Q  426 ggagagcctgccacccattt-gggtcccacaatgctcgagggattagtctccgcagttgc 484  Q
    ||||| | |||| ||||||| ||||||||||||||| ||||||||| | |||||||||||    
T  10841098 ggagaacttgcctcccatttagggtcccacaatgcttgagggattaatttccgcagttgc 10841157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 379 - 509
Target Start/End: Complemental strand, 39547471 - 39547341
Alignment:
Q  379 tgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgc 478  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||||| ||| ||||| || |||| |||| ||||||| |||| |||||| |||||||    
T  39547471 tgggttcgaatccagtcttgagcatgcagcagtgtcaaaactcttagggggagtctgccgcctatttaggtctcacaatgttcgacggattaatctccgc 39547372  T
Q  479 agttgcgcgcggaggatacccggtttacacc 509  Q
    |||||||||| ||||||  ||||||||||||    
T  39547371 agttgcgcgcagaggatttccggtttacacc 39547341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 416 - 507
Target Start/End: Original strand, 15642526 - 15642617
Alignment:
Q  416 aaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttaca 507  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  15642526 aaactcttagggagagtttgccgcccatttgggtcccacaatgctcgagagattattctccgcagttgcgcgcggaggatacccgatttaca 15642617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 359 - 509
Target Start/End: Original strand, 46864105 - 46864255
Alignment:
Q  359 ttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatg 458  Q
    ||||||||||| ||| ||  ||||||| |||||||| |||||||||||| || ||||||| ||||||||||| | ||||  ||||||||||  |||||||    
T  46864105 ttctagcttaatcaaagttttgggttcaaatccagctttgggcatgcagtagcgttaaaattcttagggagaacttgccgtccatttgggtttcacaatg 46864204  T
Q  459 ctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
     |||||||||||||||| ||||||||||||  |||||||| | ||||||||    
T  46864205 ttcgagggattagtctctgcagttgcgcgcaaaggatacctgatttacacc 46864255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 381 - 498
Target Start/End: Complemental strand, 7242912 - 7242795
Alignment:
Q  381 ggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcag 480  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||||||| || || ||||||||  || || ||| ||||||||||||||||||||||    
T  7242912 ggttcgaatccagtcttggacatgcagcaacgttaaaactcttagggagagtctacctcccatttgaatctcataatactcgagggattagtctccgcag 7242813  T
Q  481 ttgcgcgcggaggatacc 498  Q
    ||||||||||| ||||||    
T  7242812 ttgcgcgcggaagatacc 7242795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 326 - 498
Target Start/End: Original strand, 10750579 - 10750750
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||| ||||||||||||| |||  |||| |||||  |||||||||||| |||||||||||| |  ||||||||| || ||| |||||||||||||     
T  10750579 ccaagagcgcttagatgagatgaaacatgtcttttctaatttaaccaaggtcttgggttcgaatctaatcttgggcatacatcagcgttaaaactctta- 10750677  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacc 498  Q
    || | || |||| ||||||||| || ||||||| |||||||||||||||   ||||||||||| |||||||||    
T  10750678 ggtgcgcttgccgcccatttggatcgcacaatgttcgagggattagtctttacagttgcgcgcagaggatacc 10750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 336 - 507
Target Start/End: Original strand, 32534074 - 32534244
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    |||||||| |||  |||||| ||||||||||||||||||||  ||| ||| ||| |||| ||| ||||||| ||  |||||||||||||| |||||| |     
T  32534074 ttagatgatatgacacgggtttcttctagcttaaccaaggttttggattcaaattcagctttgagcatgcaacaacgttaaaactcttagagagagctta 32534173  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttaca 507  Q
    || |||| || |||| ||||||||||||| | |||||||||||| |||||||| ||||||||| ||||||||    
T  32534174 ccgccca-ttaggtctcacaatgctcgagaggttagtctccgcaattgcgcgcagaggatacctggtttaca 32534244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 336 - 425
Target Start/End: Original strand, 29124736 - 29124825
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||||||| |||| ||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||| ||||||||||||||    
T  29124736 ttagatgagatgaaacgagtctcttctagcttaaccagggtcatgagttcgaatccagcattgggcatgcagcagcgttaaaactcttag 29124825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 335 - 476
Target Start/End: Original strand, 24801371 - 24801512
Alignment:
Q  335 cttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 434  Q
    |||||||||||||  |||| | |||| ||| ||||| || ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||  |    
T  24801371 cttagatgagatgacacggatttcttatagattaactaaagtccttggttcgaatccagccttaggcatgcagcactgttaaaactcttagggagagttt 24801470  T
Q  435 gccacccatttgggtcccacaatgctcgagggattagtctcc 476  Q
     ||  ||||||| |||||||||  ||| || |||||||||||    
T  24801471 accgtccatttgagtcccacaagactcaagagattagtctcc 24801512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 416 - 498
Target Start/End: Original strand, 44913180 - 44913262
Alignment:
Q  416 aaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacc 498  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||    
T  44913180 aaactcttagggagagcttgccgcccatctgggtcccacaatgctcgagagattagtctctgcagttacgcgcagaggatacc 44913262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 441 - 513
Target Start/End: Original strand, 49071673 - 49071745
Alignment:
Q  441 catttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||| ||||||||||||    
T  49071673 catttgggtcccacaatgctcgagagattagtctccgcagttgcgtgcggaagatatccgatttacaccaaaa 49071745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 336 - 423
Target Start/End: Complemental strand, 17600648 - 17600561
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||| ||  ||||||||||||    
T  17600648 ttagatgagatgacacgggtctcttctagcttaaccaaggtcttgggttagaattcagccttgagcatgcaacatcgttaaaactctt 17600561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 32883699 - 32883625
Alignment:
Q  357 tcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 431  Q
    |||||||||||||||||| |  |||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  32883699 tcttctagcttaaccaagattttgggttcgaatccagcattggacatgcagcagcgttaaaactcttagggagag 32883625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 35692467 - 35692571
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    ||||||| |||||||||||||| | |||||| |||||| |||||||| ||| || ||||||||||| | ||||||||||| |   |||||||||||||||    
T  35692467 caagagcgcttagatgagatggcatgggtcttttctagtttaaccaatgtcttgagttcgaatccaacattgggcatgcaacgacgttaaaactcttagg 35692566  T
Q  427 gagag 431  Q
    |||||    
T  35692567 gagag 35692571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 324 - 383
Target Start/End: Complemental strand, 14500420 - 14500361
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggt 383  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14500420 acccaagagtgcttagatgcgatggaacgggtctcttctagcttaaccaaggtcctgggt 14500361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 357 - 492
Target Start/End: Complemental strand, 31733820 - 31733685
Alignment:
Q  357 tcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaa 456  Q
    ||||||| ||||||||| ||  ||||||||||| |||| || |||||||||||| ||||||||||||||||||||  || |  |||| |||||  |||||    
T  31733820 tcttctaacttaaccaatgttttgggttcgaattcagcattaggcatgcagcagagttaaaactcttagggagagtttgtcgtccatctgggtgtcacaa 31733721  T
Q  457 tgctcgagggattagtctccgcagttgcgcgcggag 492  Q
      || || | |||||||||| |||||||||||||||    
T  31733720 gactggatgaattagtctccacagttgcgcgcggag 31733685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 336 - 431
Target Start/End: Original strand, 36982346 - 36982441
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 431  Q
    ||||||||||||  || |||||||||||| ||||||||||||  |||||||||| ||||||| | |||||| ||  ||||||||||||||||||||    
T  36982346 ttagatgagatgacacaggtctcttctagtttaaccaaggtctcgggttcgaattcagccttagacatgcaacaacgttaaaactcttagggagag 36982441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 416 - 505
Target Start/End: Original strand, 10367575 - 10367664
Alignment:
Q  416 aaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    ||||||||| |||||| || || ||||||||||||| ||||||||||| |||||| |||||||||||||| ||| || ||||||| ||||    
T  10367575 aaactcttaaggagagtctaccgcccatttgggtccaacaatgctcgaaggattaatctccgcagttgcgtgcgaagaatacccgattta 10367664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 336 - 488
Target Start/End: Original strand, 36086848 - 36087000
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||||||||||  | | ||||||| ||| ||||| ||||||||| |||||||||||| |||| ||||||| |  |||||||||||||| | | ||  ||    
T  36086848 ttagatgagatgacaagagtctcttttagtttaacaaaggtcctgagttcgaatccagtcttgcgcatgcaaccatgttaaaactcttatgaaaagtttg 36086947  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgc 488  Q
    ||  | |||| |||| ||| ||||| |||||||||||||||| || |||||||    
T  36086948 ccgtctatttaggtctcacgatgctggagggattagtctccgtagctgcgcgc 36087000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 336 - 483
Target Start/End: Complemental strand, 25655414 - 25655267
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||||||||||||||   | ||||||| ||||| |||||| ||||||||||||  | | ||||||||||||||  |||||||||||||| |||||  ||    
T  25655414 ttagatgagatggaacaaatatcttctaacttaatcaaggttctgggttcgaatttaacattgggcatgcagcaacgttaaaactcttagagagagtttg 25655315  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttg 483  Q
    ||  ||||||   || |||||||||  || |||||||||| |||||||    
T  25655314 ccgtccatttaaatcacacaatgctaaagagattagtctctgcagttg 25655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 341 - 463
Target Start/End: Complemental strand, 36522381 - 36522259
Alignment:
Q  341 tgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacc 440  Q
    ||||||||||||| | | |||||||||||| ||  | ||  |||||||| ||| ||| | |||||||||  ||||||||||||||||||||  ||||  |    
T  36522381 tgagatggaacggattttttctagcttaactaaatttctaagttcgaatacagtcttagacatgcagcaaggttaaaactcttagggagagtttgccgtc 36522282  T
Q  441 catttgggtcccacaatgctcga 463  Q
    |||||| ||||||||||||||||    
T  36522281 catttgagtcccacaatgctcga 36522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 340 - 428
Target Start/End: Original strand, 52912616 - 52912702
Alignment:
Q  340 atgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttaggga 428  Q
    ||||||||||||||||||||  ||||||||||||| || ||||||||||||||| |||  ||||| ||||  ||||||||||| |||||    
T  52912616 atgagatggaacgggtctctattagcttaaccaagatcttgggttcgaatccagtctt--gcatgtagcaacgttaaaactctcaggga 52912702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 40019231 - 40019327
Alignment:
Q  335 cttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 431  Q
    ||||||||| |||  ||| |||||||||| ||||| ||||||  ||||||||||| |||||||||  ||||||||  |||||||||||| |||||||    
T  40019231 cttagatgaaatgatacgagtctcttctaacttaatcaaggttttgggttcgaattcagccttggatatgcagcaacgttaaaactcttggggagag 40019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 340 - 445
Target Start/End: Original strand, 7624870 - 7624973
Alignment:
Q  340 atgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccac 439  Q
    ||||||||||||  |||| |||||||||||||||| |  ||||||| ||||||||||||| |||||| |||| | ||||||| || ||||||| ||||||    
T  7624870 atgagatggaacaagtct-ttctagcttaaccaagattatgggttcaaatccagccttggacatgcaacagtctgaaaactcgta-ggagagcttgccac 7624967  T
Q  440 ccattt 445  Q
    | ||||    
T  7624968 ctattt 7624973  T

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Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 401 - 497
Target Start/End: Complemental strand, 61256 - 61161
Alignment:
Q  401 catgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatac 497  Q
    |||||||||| ||||||||||||   |||||  ||||||| |||||||||| | |||| ||||||||||| |||| |||||||| | ||||||||||    
T  61256 catgcagcagcgttaaaactcttgaagagagtttgccacctatttgggtcc-ataatgttcgagggattaatctctgcagttgcacacggaggatac 61161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 21774612 - 21774668
Alignment:
Q  354 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcag 410  Q
    |||||||||||||||| ||||||  ||||||||||||||| ||||| ||||||||||    
T  21774612 gtctcttctagcttaatcaaggttttgggttcgaatccagtcttggacatgcagcag 21774668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 338 - 475
Target Start/End: Complemental strand, 33059870 - 33059737
Alignment:
Q  338 agatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgcc 437  Q
    ||||||||||| || ||| |||||||| ||||||||| || ||||||| |||| ||  ||| |||    |||  ||||||||||||| ||||||  ||||    
T  33059870 agatgagatggtactggtatcttctagtttaaccaagatcatgggttcaaatctagttttgagca----gcaacgttaaaactcttaaggagagtttgcc 33059775  T
Q  438 acccatttgggtcccacaatgctcgagggattagtctc 475  Q
     |||||||||||||||||| | | |||| |||||||||    
T  33059774 gcccatttgggtcccacaaggtttgaggaattagtctc 33059737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 441 - 512
Target Start/End: Complemental strand, 6607739 - 6607666
Alignment:
Q  441 catttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcg--gaggatacccggtttacaccaaa 512  Q
    ||||| |||| ||||||||||||||||||||||||||||| ||| ||||  ||||||||  | |||||||||||    
T  6607739 catttaggtctcacaatgctcgagggattagtctccgcagctgcacgcgtagaggatacttgatttacaccaaa 6607666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 425
Target Start/End: Original strand, 28506280 - 28506369
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||| |||  || |||||||||||| ||||| ||||| |||| |||||||  | | |||| |||||||||||||| ||||||||||    
T  28506280 ttagatgaaatgacacaggtctcttctagtttaactaaggttctggattcgaatttaactttggacatgcagcagtgttgaaactcttag 28506369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 411 - 472
Target Start/End: Complemental strand, 32883622 - 32883561
Alignment:
Q  411 tgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagt 472  Q
    |||||||||||||||||||||  |||| |||||||||  |||||||  ||||||||||||||    
T  32883622 tgttaaaactcttagggagagtttgccgcccatttggaccccacaagactcgagggattagt 32883561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 420 - 507
Target Start/End: Original strand, 2044472 - 2044559
Alignment:
Q  420 tcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttaca 507  Q
    ||||||||||||  | || || |||||||| ||||||||||| || |||||||||| |||||| ||||  ||| ||||||| ||||||    
T  2044472 tcttagggagagattaccgcctatttgggttccacaatgctcaagagattagtctctgcagtttcgcgtagagaatacccgatttaca 2044559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 409
Target Start/End: Complemental strand, 9066190 - 9066128
Alignment:
Q  347 ggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagca 409  Q
    |||||| ||||||||||| |||||||| ||  ||| ||||||||||| |||||| ||||||||    
T  9066190 ggaacgagtctcttctagtttaaccaaagttttggattcgaatccagtcttgggtatgcagca 9066128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 48728057 - 48728107
Alignment:
Q  373 aggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||| ||| |||||||||| |||||||||||| |||||||| |||||    
T  48728057 aggtcctgagtttgaatccagccatgggcatgcagctgtgttaaatctctt 48728107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 456
Target Start/End: Original strand, 13546436 - 13546537
Alignment:
Q  355 tctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccac 454  Q
    ||||||||| |||||| || ||| ||||||||||||||| |||   |||| | || |||||||||||||| ||||||  | || ||||||||  ||||||    
T  13546436 tctcttctaacttaactaaagtcgtgggttcgaatccagtcttatacatgtaacaatgttaaaactcttatggagagtttaccgcccatttgaatcccac 13546535  T
Q  455 aa 456  Q
    ||    
T  13546536 aa 13546537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 2e-64; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 335 - 512
Target Start/End: Original strand, 12411138 - 12411315
Alignment:
Q  335 cttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 434  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||    
T  12411138 cttagatgagatggaacaggtctcttctaacttaaccaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactcttaggaagagtct 12411237  T
Q  435 gccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaa 512  Q
    ||| |||||||  ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  12411238 gccgcccatttaagtcccacaatgcttgagggattagtctccacagttgcgcgcgggggatacccggtttataccaaa 12411315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 324 - 509
Target Start/End: Original strand, 21910184 - 21910368
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    ||||||||||  |||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  21910184 acccaagagcgtttagatgagatgaaacaagtctcttctagcttaaccaagatcctgggttcgaatccagccttgggcatgcaacatcgttaaaactctt 21910283  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacacc 509  Q
    || ||||| ||||| | ||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  21910284 agagagagtctgccgctcatttaggtcccacaatactc-agggattagtctccgcagttgcacgcggaggatacctggtttacacc 21910368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 323 - 505
Target Start/End: Original strand, 31412101 - 31412282
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    |||||||||||||||||||||||||||||||||||||  ||| ||||| |||||| ||| | ||||| |||| |||||| ||||||||||||||||||||    
T  31412101 aacccaagagcacttagatgagatggaacgggtctctcatagtttaactaaggtcatggat-cgaattcagctttgggcgtgcagcagtgttaaaactct 31412199  T
Q  423 tagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||  |||||||||| ||||||||| ||||||||| ||| ||||    
T  31412200 tagggagagtctgccgcccatttgggttccacaatgctcgagaaattagtctccacagttgcgcacggaggatatccgattta 31412282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 378 - 505
Target Start/End: Complemental strand, 12837005 - 12836878
Alignment:
Q  378 ctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccg 477  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||||     
T  12837005 ctgggttcgaatccagccttaggcatgcagcagcgttaaaactcttagggagagctcgccgcccatttgggtcccacaatgcttgagggattagtctccc 12836906  T
Q  478 cagttgcgcgcggaggatacccggttta 505  Q
    ||||||||||||||||||||||||||||    
T  12836905 cagttgcgcgcggaggatacccggttta 12836878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 353 - 505
Target Start/End: Original strand, 28099251 - 28099403
Alignment:
Q  353 ggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtccc 452  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   || |  ||||||| || ||    
T  28099251 ggtctcttctaccttaactaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaacttttagggagaatttgtcgtccatttgagttcc 28099350  T
Q  453 acaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttta 505  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  28099351 ataatgctcgagggattagtctccgcagttgcgagcggaggatacccagttta 28099403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 327 - 472
Target Start/End: Original strand, 423637 - 423782
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    ||||||| ||||||||||||||||| | |||||||||| |||||||||||  |||||| |||||||||||||||||||| |||| ||||||||||||||     
T  423637 caagagcgcttagatgagatggaacagatctcttctagtttaaccaaggttttgggtttgaatccagccttgggcatgctgcagcgttaaaactcttaga 423736  T
Q  427 gagagcctgccacccatttgggtcccacaatgctcgagggattagt 472  Q
    || |  |||||  ||||||| |||||||||||||||||||||||||    
T  423737 gataaactgccgtccatttgagtcccacaatgctcgagggattagt 423782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 340 - 483
Target Start/End: Complemental strand, 21029129 - 21028982
Alignment:
Q  340 atgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcat------gcagcagtgttaaaactcttagggagagcc 433  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||      ||||||| |||||||||||||  |||||      
T  21029129 atgagatggcacgggtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagatgcagcagcgttaaaactctta--gagagtt 21029032  T
Q  434 tgccacccatttgggtcccacaatgctcgagggattagtctccgcagttg 483  Q
    |||| ||||||||||| |||||| |||| |||||||||||||||||||||    
T  21029031 tgccgcccatttgggtgccacaaggctcaagggattagtctccgcagttg 21028982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 326 - 508
Target Start/End: Complemental strand, 15614733 - 15614551
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||| |||| ||||||||||||| |||||||||| ||||||||| ||| ||||||||||| ||| ||||| |||| ||||  ||||||||| || |    
T  15614733 ccaagagcgcttatatgagatggaacgagtctcttctaacttaaccaatgtcatgggttcgaattcagtcttggacatgtagcaacgttaaaacttttcg 15614634  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 508  Q
    | ||| | | ||||| ||||| |||||||||||||| ||| |||||||| | |||||||| | ||||||||||| ||||||||    
T  15614633 gaagaacttaccacctatttgagtcccacaatgctctaggaattagtcttcacagttgcgtgtggaggatacccagtttacac 15614551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 323 - 507
Target Start/End: Original strand, 25084012 - 25084196
Alignment:
Q  323 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 422  Q
    ||||||||| |||||||||||||||  ||  |||||||||||||||| ||| ||| || |||||||| ||| ||||| ||||||||| ||||||||||||    
T  25084012 aacccaagaacacttagatgagatgacacaagtctcttctagcttaatcaaagtcttgagttcgaattcagtcttggacatgcagcaatgttaaaactct 25084111  T
Q  423 tagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttaca 507  Q
    |||||||||| || || ||||||  || |||||||||||||| |||||||||  ||||||  ||||  | |||||||| ||||||    
T  25084112 tagggagagcttgtcatccatttaagttccacaatgctcgagagattagtctatgcagttatgcgcataagatacccgatttaca 25084196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 336 - 504
Target Start/End: Complemental strand, 31107643 - 31107475
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    |||||||||||| || |||||||||||| |||||| ||||| ||| ||||||||||||| |||| |||||| ||| |||||||||||| |||||||| |     
T  31107643 ttagatgagatgaaatgggtctcttctaacttaactaaggttctgagttcgaatccagcattggacatgcaacagcgttaaaactctttgggagagctta 31107544  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggttt 504  Q
    ||  |||||||  |||||||||  ||||| |||||||||| | | |||||||| ||||||||| |||||    
T  31107543 ccgtccatttgattcccacaatattcgagagattagtctctgtaattgcgcgcagaggatacctggttt 31107475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 327 - 513
Target Start/End: Original strand, 278374 - 278559
Alignment:
Q  327 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 426  Q
    |||||||  ||||||||||||  ||| ||||||||||||||||| |||||| || ||| ||||||||| ||||||||||| ||   |||||||||||| |    
T  278374 caagagcgtttagatgagatgacacgagtctcttctagcttaactaaggtcttgagtttgaatccagctttgggcatgcaaca-cattaaaactcttatg 278472  T
Q  427 gagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||  ||||  |||||| ||||||||||  ||| |||||||||||  | ||||||| | ||||||||||||| ||||| ||||||    
T  278473 gagagtttgccgtccatttaggtcccacaaaactcaagggattagtcgtcacagttgcacacggaggatacccgatttaccccaaaa 278559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 324 - 511
Target Start/End: Original strand, 5944821 - 5945011
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||||  |||| || |||||  ||||||||||| || |||||||||||||||| |||||||| ||| ||| | |||| | || |||||||||| ||    
T  5944821 acccaagagtgcttatataagatgatacgggtctcttttaacttaaccaaggtcctgagttcgaattcagtctttgacatgtaacattgttaaaactttt 5944920  T
Q  424 agggagagcctgccacccatttgggtcccacaatgctcgag---ggattagtctccgcagttgcgcgcggaggatacccggtttacaccaa 511  Q
    ||||||||  |||| ||||||| | ||| ||||| ||||||   | |||| ||||| |||||  || ||||||||||||||||||||||||    
T  5944921 agggagagtttgccgcccatttagatcctacaatactcgaggccgaattactctccacagttatgcacggaggatacccggtttacaccaa 5945011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 326 - 484
Target Start/End: Original strand, 28933119 - 28933277
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    ||||||||  ||||||||||| ||| | ||||||| || |||||| || ||||||  || |||| ||||||| | |||||| ||  ||||||| ||||||    
T  28933119 ccaagagcgtttagatgagatagaatgagtctcttttatcttaactaaagtcctgattttgaattcagccttagacatgcaacatcgttaaaattcttag 28933218  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgc 484  Q
     |||||  |||| ||||||||||| |||||||||||||| || |||| |||||||||||    
T  28933219 agagagtttgccgcccatttgggttccacaatgctcgagtgaatagtatccgcagttgc 28933277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 422 - 496
Target Start/End: Original strand, 9536844 - 9536918
Alignment:
Q  422 ttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggata 496  Q
    ||||||||||||| ||  |||||| | | |||||||||||||||||||||||||||||||||||| |||||||||    
T  9536844 ttagggagagcctaccgtccatttagattccacaatgctcgagggattagtctccgcagttgcgctcggaggata 9536918  T

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Target: chr6; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 326 - 487
Target Start/End: Complemental strand, 26477859 - 26477698
Alignment:
Q  326 ccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    |||||||| |||| ||||||||  |||| ||| || ||||||||||||| || ||  || ||||||||||| ||  ||||||||  ||||||| ||||||    
T  26477859 ccaagagcgcttaaatgagatgacacggatctattttagcttaaccaagatcttgaatttgaatccagcctcggaaatgcagcaacgttaaaattcttag 26477760  T
Q  426 ggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcg 487  Q
    ||||||  ||||||||||||  |||||| || ||| || |||||||||| | || |||||||    
T  26477759 ggagagtttgccacccatttaagtcccataaggctggaaggattagtcttcacaattgcgcg 26477698  T

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Target: chr6; HSP #16
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 336 - 484
Target Start/End: Original strand, 3237911 - 3238058
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 435  Q
    ||||||||||||  | | ||||||||||  ||||||||| |||| ||||||||||||||||||  ||| ||| | ||||||||||||||||| || | ||    
T  3237911 ttagatgagatgatatgtgtctcttctaatttaaccaagatccttggttcgaatccagccttgaacattcagtaatgttaaaactcttaggg-gaacttg 3238009  T
Q  436 ccacccatttgggtcccacaatgctcgagggattagtctccgcagttgc 484  Q
    ||   |||||  || |||||||  ||||||||||||||||| |||||||    
T  3238010 ccgttcatttaagttccacaataatcgagggattagtctccacagttgc 3238058  T

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Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 1534320 - 1534394
Alignment:
Q  413 ttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcg 487  Q
    |||||||||||||||||||| || | |||||||| ||| |||||||||||||| |||  ||||||||||||||||    
T  1534320 ttaaaactcttagggagagcttgtcgcccatttgagtcgcacaatgctcgaggaattgatctccgcagttgcgcg 1534394  T

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Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 402 - 483
Target Start/End: Complemental strand, 21028924 - 21028845
Alignment:
Q  402 atgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttg 483  Q
    ||||||||| ||||||||||||||  ||||  |||| ||||||||||| |||||| |||| |||||||||||||||||||||    
T  21028924 atgcagcagcgttaaaactcttag--agagtttgccgcccatttgggtgccacaaggctcaagggattagtctccgcagttg 21028845  T

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Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 336 - 425
Target Start/End: Original strand, 27735469 - 27735557
Alignment:
Q  336 ttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 425  Q
    ||||||||||||| || |||||||| |||||||||||| || ||| |||||||| || |||||| |||| ||| ||||||||||||||||    
T  27735469 ttagatgagatggcacaggtctcttttagcttaaccaatgt-ctgagttcgaatacaaccttggacatggagcggtgttaaaactcttag 27735557  T

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Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 35224550 - 35224651
Alignment:
Q  324 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 423  Q
    |||||||| | |||| |||||||||||||||||||||    |||||||||||| || | |||||||| || ||||||| |||||||  |||||||||||     
T  35224550 acccaagaacgcttaaatgagatggaacgggtctcttt---cttaaccaaggttctagattcgaatctagtcttgggcgtgcagcaacgttaaaactctc 35224646  T
Q  424 aggga 428  Q
    |||||    
T  35224647 aggga 35224651  T

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Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 508
Target Start/End: Original strand, 17177180 - 17177301
Alignment:
Q  387 aatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgc 486  Q
    |||| ||| |||||||||||||||  |||||||||||| ||| ||  | |   | |||||| || |||||| |||||||||||| |||||| | ||| ||    
T  17177180 aatcaagcattgggcatgcagcagctttaaaactcttaaggaaagttttctgtctatttggatctcacaatactcgagggattaatctccgtaattgtgc 17177279  T
Q  487 gcggaggatacccggtttacac 508  Q
    ||||||||||| ||| ||||||    
T  17177280 gcggaggatactcggcttacac 17177301  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 413 - 485
Target Start/End: Original strand, 6062110 - 6062182
Alignment:
Q  413 ttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcg 485  Q
    |||||||||||||| ||||| ||||   ||||||||||| |||| | |||| |||||||||| ||||||||||    
T  6062110 ttaaaactcttaggaagagcttgccgttcatttgggtcctacaacgttcgatggattagtcttcgcagttgcg 6062182  T

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Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 355 - 471
Target Start/End: Complemental strand, 7468671 - 7468556
Alignment:
Q  355 tctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccac 454  Q
    |||| |||| ||||| |||||||||| ||| ||| ||||  |||||||||||||||   ||||||||||| ||||||  |||||||||||||  || |||    
T  7468671 tctcctctaccttaatcaaggtcctgagtttgaaaccagttttgggcatgcagcagcagtaaaactctta-ggagagtttgccacccatttgaatctcac 7468573  T
Q  455 aatgctcgagggattag 471  Q
    ||   ||||||||||||    
T  7468572 aagattcgagggattag 7468556  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 359 - 430
Target Start/End: Original strand, 29185307 - 29185378
Alignment:
Q  359 ttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggaga 430  Q
    |||||| ||||| ||||| || |||||||||||||| || | |||||| ||  |||||||||||||||||||    
T  29185307 ttctagtttaactaaggttctaggttcgaatccagcattagacatgcatcaacgttaaaactcttagggaga 29185378  T

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Target: scaffold0020 (Bit Score: 63; Significance: 9e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 321 - 410
Target Start/End: Original strand, 167831 - 167918
Alignment:
Q  321 ttaacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcag 410  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||    
T  167831 ttaacccaagagcgcttagatgagatgaaacgggtctcttctagcttaatcaaggtc--gggttcaaatccagccttgggcatgcagcag 167918  T

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Target: scaffold0009 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 415 - 499
Target Start/End: Complemental strand, 27296 - 27212
Alignment:
Q  415 aaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggataccc 499  Q
    |||||||||||||||||| |||| ||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  27296 aaaactcttagggagagcttgccgcccatttggatctcacgatgctcgagggattagtcttcgcagttgcgcgcggaggataccc 27212  T

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Target: scaffold0009; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 329 - 420
Target Start/End: Complemental strand, 32421 - 32330
Alignment:
Q  329 agagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaact 420  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||| ||||||||| |||||||||    
T  32421 agagcatttagataagatggaacgggtctcttctagcttcaccaaggttctgggttcgaatccaatcttgggtatgcagcagcgttaaaact 32330  T

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Target: scaffold0013 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 441 - 513
Target Start/End: Complemental strand, 29197 - 29125
Alignment:
Q  441 catttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaa 513  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  29197 catttgggtcccacaatgctcgtgggattagtctccacagttgcgcgcggaggatacccgatttacacaaaaa 29125  T

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Target: scaffold0071 (Bit Score: 43; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 381 - 476
Target Start/End: Complemental strand, 16164 - 16065
Alignment:
Q  381 ggttcgaatccagccttgggcat----gcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagggattagtctcc 476  Q
    |||||||||||||||||||||||    ||||||||||||| | || || ||||||  ||||  ||||||||||| |||||||||||| ||||||||||||    
T  16164 ggttcgaatccagccttgggcattcgtgcagcagtgttaatattcgtatggagagtttgccgtccatttgggtctcacaatgctcgacggattagtctcc 16065  T

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Target: scaffold0189 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 10973 - 11089
Alignment:
Q  366 ttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccacccatttgggtcccacaatgctcgagg 465  Q
    ||||| |||||||| ||||||||||||   ||||||||||| || |||||||||||||| ||||||  |||| ||||||| |||  |||||  |||||      
T  10973 ttaactaaggtcctaggttcgaatccatttttgggcatgcaacaatgttaaaactcttacggagagtttgccgcccatttaggtttcacaaaactcgata 11072  T
Q  466 gattagtctccgcagtt 482  Q
    ||||| ||||| |||||    
T  11073 gattaatctccacagtt 11089  T

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