View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1299_2D_low_91 (Length: 305)
Name: NF1299_2D_low_91
Description: NF1299_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1299_2D_low_91 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 44952003 - 44952285
Alignment:
| Q |
17 |
tcaagacaaatactaagaagtatacataaaaataaaggatttatggtagtcgtatgttataggacccatcgtgtatagagaagtaagattcatttaagat |
116 |
Q |
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| T |
44952003 |
tcaagacaaatactaagaagtatacataaaaataaatgatttatggtagtcgtatgttataggacccatcgtgtatagagaagtaagattcacttaagat |
44952102 |
T |
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| Q |
117 |
atacatattgcacatttatcaaatacacatttacttaggaacacgcatgttcacttgatacttctatttcacattttggtaacatttctaacttcagaca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44952103 |
atacatattgcacatttatcaaatacacatttacttagaaacacgcatgttcacttgatacttctatttcacattttggtaacatttctaacttcagaca |
44952202 |
T |
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| Q |
217 |
aaagtcaaggaatgtggtagatgttcattcagagacagatgcaatcaaaactcatgtagtcactctactcgattgatgtccat |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
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| T |
44952203 |
aaagtcaaggaatgtggtagatgttcattcagagacagatgcaatcaaaactcatgtagtcattctactcgatcgatgtccat |
44952285 |
T |
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