View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1300-Insertion-8 (Length: 757)

Name: NF1300-Insertion-8
Description: NF1300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1300-Insertion-8
NF1300-Insertion-8
[»] chr7 (6 HSPs)
chr7 (333-757)||(29980137-29980562)
chr7 (68-173)||(1360569-1360674)
chr7 (68-173)||(10031889-10031994)
chr7 (76-175)||(46127983-46128082)
chr7 (68-145)||(3256623-3256700)
chr7 (91-144)||(9533516-9533569)
[»] chr5 (1 HSPs)
chr5 (68-148)||(779118-779198)
[»] chr2 (8 HSPs)
chr2 (68-148)||(2888941-2889021)
chr2 (68-148)||(14102292-14102372)
chr2 (68-148)||(2825949-2826029)
chr2 (68-114)||(31513785-31513831)
chr2 (68-148)||(8964425-8964505)
chr2 (68-147)||(27948004-27948084)
chr2 (91-148)||(6581604-6581661)
chr2 (68-173)||(13811072-13811177)
[»] chr8 (2 HSPs)
chr8 (70-148)||(27055945-27056023)
chr8 (76-123)||(40299689-40299736)
[»] chr6 (2 HSPs)
chr6 (68-173)||(13063849-13063954)
chr6 (68-173)||(13070474-13070578)
[»] chr1 (5 HSPs)
chr1 (68-173)||(37037680-37037785)
chr1 (68-148)||(15549640-15549720)
chr1 (69-173)||(36321593-36321697)
chr1 (68-114)||(2633064-2633110)
chr1 (68-146)||(17554891-17554969)
[»] chr3 (3 HSPs)
chr3 (76-148)||(47115306-47115378)
chr3 (68-148)||(48322199-48322279)
chr3 (68-174)||(46711882-46711987)
[»] chr4 (2 HSPs)
chr4 (76-175)||(35808895-35808994)
chr4 (96-173)||(47560686-47560763)


Alignment Details
Target: chr7 (Bit Score: 343; Significance: 0; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 333 - 757
Target Start/End: Original strand, 29980137 - 29980562
Alignment:
Q  333 agcaagtggtaaccattgaccaaacacaaagaagcttggaactagcaaa-gggtcaaagaaaagaggtttgtgtttgtgtttgggtttggtttgactcag 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||      ||||||||||||||||||||||||    
T  29980137 agcaagtggtaaccattgaccaaacacaaagaagcttggaactagcaaaagggtcaaagaaaagaggttt------gtgtttgggtttggtttgactcag 29980230  T
Q  432 tagcaacagatgaagaagaaagaaagtgagacttgggtgagtggtgtggtcttggccccgtcggcggtctggtctatgccaaggctcaaggctggcaacc 531  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29980231 tagcaacagatgaagaagaaagaaagtgagacttgggtgagtggtgtggtcttggccccgtcggcggtctggtctatgccaaggctcaaggctggcaacc 29980330  T
Q  532 ttccataattttctcaccaacacgtgggcaaccgcagacacacgtttgattaaattttgtgagtgaaaatctacttgtgctattgtaattgtaattatat 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29980331 ttccataattttctcaccaacacgtgggcaaccgcagacacacgtttgattaaattttgtgagtgaaaatctacttgtgctattgtaattgtaattatat 29980430  T
Q  632 aggtattgttccagaatgaatgcatgcatgcatgtatataagatagtggtaatcatatctg------nnnnnnnnnaatcattgtagtcttcttaaacta 725  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||               ||||||||||||||||||||||||    
T  29980431 aagtattgttccagaatgaatgcatgcatgcatgtatataagatagtggcaatcatatctgtttttttttttttttaatcattgtagtcttcttaaacta 29980530  T
Q  726 gttgaatatcaccttttttctcgaaaacctag 757  Q
    ||||||||||||||||||||||||||||||||    
T  29980531 gttgaatatcaccttttttctcgaaaacctag 29980562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 1360569 - 1360674
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgtta 167  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| || |||||||||||||||||| || ||| |||||||||||    
T  1360569 aaaaagttaaatgtttcgatttccaatgcattgattacacacttttttataaatacatactacttatagtccttaaagagtgtctcagggacacttgtta 1360668  T
Q  168 acattt 173  Q
    ||||||    
T  1360669 acattt 1360674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 10031994 - 10031889
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgtta 167  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||  | |  | ||||||||||    
T  10031994 aaaaagttaaatgtttcgatttccaatgcattgattacacactttttcataaatacatactatttatagtccttaaagagtgcccctaaaacacttgtta 10031895  T
Q  168 acattt 173  Q
    ||||||    
T  10031894 acattt 10031889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 46128082 - 46127983
Alignment:
Q  76 aaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgttaacattttc 175  Q
    ||||||||| || | ||||| ||||||| |||| |||||  ||||||| |  |||||||| |||||||| |||||  ||| |||||| ||||||||||||    
T  46128082 aaatgtttcaattttcaatggattgattgcacattttttcataaatacttgctatttataatccttaaaaagtttatcagggacactcgttaacattttc 46127983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 3256700 - 3256623
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaag 145  Q
    ||||||| |||||||||||| ||||||||| ||| ||||||  ||||  ||||||| ||| | |||| ||||||||||    
T  3256700 aaaaagtcaaatgtttcgatttccaatgcactgaatacacatattttcataaatacttatcacttatggtccttaaag 3256623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 9533569 - 9533516
Alignment:
Q  91 caatgcattgattacacactttttattaaatacatattatttatagtccttaaa 144  Q
    ||||||||||||||||| | ||||  ||||||| |||||||||||||| |||||    
T  9533569 caatgcattgattacacgcatttttataaatacttattatttatagtctttaaa 9533516  T

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Target: chr5 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 779118 - 779198
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||    
T  779118 aaaaagttaaatgtttcgatttccaatgcattgattacacactttttcgtaaatacatactatttatagtccttagagagt 779198  T

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Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 2888941 - 2889021
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    |||||||||||| ||||||| ||||||| ||||| ||||||||||||  |||||||||| || ||||||||||||||||||    
T  2888941 aaaaagttaaatatttcgatttccaatgtattgactacacactttttcataaatacatactacttatagtccttaaagagt 2889021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 14102372 - 14102292
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||  ||||||  || || ||||||||||||||||||    
T  14102372 aaaaagttaaatatttcgatttccaatacattgattacacactttttcataaatagttactacttatagtccttaaagagt 14102292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 2826029 - 2825949
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    ||||||| |||| ||||||| ||||||||||||||||||||| ||||  ||||||| || || ||||||  ||||||||||    
T  2826029 aaaaagtaaaatatttcgatttccaatgcattgattacacacatttttataaatacttactacttatagctcttaaagagt 2825949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 31513785 - 31513831
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacacttttt 114  Q
    ||||| |||||||||||||| |||||||||||||||||||| |||||    
T  31513785 aaaaatttaaatgtttcgatttccaatgcattgattacacatttttt 31513831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 8964425 - 8964505
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    ||||||| |||| |||| || ||||||||||||||||||||  ||||  ||||||| |||||  ||| |||||||||||||    
T  8964425 aaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaatacttattacatatggtccttaaagagt 8964505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 27948084 - 27948004
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgatt-acacactttttattaaatacatattatttatagtccttaaagag 147  Q
    ||||||| |||||||||||| ||||||||||||||| |||||| ||||  ||||||| || || ||||  |||||||||||    
T  27948084 aaaaagtcaaatgtttcgatttccaatgcattgattaacacacattttcataaatacttactacttatgatccttaaagag 27948004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 6581604 - 6581661
Alignment:
Q  91 caatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    ||||||||||||||||||||||||  ||||||  || || ||||||| ||||||||||    
T  6581604 caatgcattgattacacactttttcataaatagttactacttatagttcttaaagagt 6581661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 13811072 - 13811177
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgtta 167  Q
    ||||||| |||| |||  || |||||||||||||| ||||   ||||  ||||||| |  ||||||||| ||||||||||| || | |||||||| ||||    
T  13811072 aaaaagtaaaatattttaatttccaatgcattgatcacacgtatttttataaatactttctatttatagcccttaaagagtgtcccggagacactggtta 13811171  T
Q  168 acattt 173  Q
    ||||||    
T  13811172 acattt 13811177  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 148
Target Start/End: Original strand, 27055945 - 27056023
Alignment:
Q  70 aaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||  ||||||  || || ||||||||||||||||||    
T  27055945 aaagttaaatgtttcgatttccaatgtattgattacacattttttcataaataattactacttatagtccttaaagagt 27056023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 40299689 - 40299736
Alignment:
Q  76 aaatgtttcgatatccaatgcattgattacacactttttattaaatac 123  Q
    |||||||||||| |||||||||||||||| |||| ||||| |||||||    
T  40299689 aaatgtttcgatttccaatgcattgattatacacattttaataaatac 40299736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 13063954 - 13063849
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgtta 167  Q
    ||||||| |||||||  ||| |||||| |||||||||||||||||||  ||||||  || ||||||||||||||||||||| || |  ||||||| || |    
T  13063954 aaaaagtcaaatgttgtgatttccaatacattgattacacactttttcataaatagttactatttatagtccttaaagagtgtctcgaagacactcgtga 13063855  T
Q  168 acattt 173  Q
    ||||||    
T  13063854 acattt 13063849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 13070578 - 13070474
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgtta 167  Q
    |||||||||||||||  ||| |||||| ||||||||||||| |||||  ||||||  || |||||||||| |||||||||| || | ||| |||| ||||    
T  13070578 aaaaagttaaatgttgtgatttccaatacattgattacacattttttcataaatagttactatttatagt-cttaaagagtgtctcggaggcactcgtta 13070480  T
Q  168 acattt 173  Q
    ||||||    
T  13070479 acattt 13070474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 37037680 - 37037785
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacaca-ctttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgtt 166  Q
    ||||||||||||||||| || |||||| |||||||||||||  |||||  |||||| |||||||||||| || |||||||||  | ||| || |||||||    
T  37037680 aaaaagttaaatgtttcaatttccaatacattgattacacatttttttcataaatatatattatttataatctttaaagagtgacgcag-gagacttgtt 37037778  T
Q  167 aacattt 173  Q
    |||||||    
T  37037779 aacattt 37037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 15549640 - 15549720
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    ||||||| |||| ||||||| | ||||||||||||||||||| ||||  ||||||| |  || |||||||| |||||||||    
T  15549640 aaaaagtaaaatatttcgattttcaatgcattgattacacacatttttataaatacttgctacttatagtctttaaagagt 15549720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 36321697 - 36321593
Alignment:
Q  69 aaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgttaa 168  Q
    ||||||||||  ||||||| ||||||||||||||||||    ||||  ||||||| |  |||||||||||||||||||||  | ||  |||||| |||||    
T  36321697 aaaagttaaacatttcgatttccaatgcattgattacatgtatttttataaatacttgctatttatagtccttaaagagtgccccaaggacactcgttaa 36321598  T
Q  169 cattt 173  Q
    |||||    
T  36321597 cattt 36321593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 2633064 - 2633110
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacacttttt 114  Q
    |||||||||||||||||||| ||||||  |||||||| |||||||||    
T  2633064 aaaaagttaaatgtttcgatttccaatatattgattatacacttttt 2633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 17554891 - 17554969
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaaga 146  Q
    ||||||||||||||||| || | |||||||||||||| | | |||||  ||||||  ||||| |||| |||||||||||    
T  17554891 aaaaagttaaatgtttcaatttacaatgcattgattatatattttttcataaatagttattacttatggtccttaaaga 17554969  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 47115378 - 47115306
Alignment:
Q  76 aaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    |||||||| ||| | ||||||||||||||||   |||||  ||||||| |||||||||| |||||||||||||    
T  47115378 aaatgttttgattttcaatgcattgattacatgttttttgataaatacttattatttatggtccttaaagagt 47115306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 48322279 - 48322199
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagt 148  Q
    ||||||| |||||||||||| |||||| |||||||||||   |||||  ||||||| || || |||| |||||||||||||    
T  48322279 aaaaagtcaaatgtttcgatttccaatacattgattacatgttttttcataaatacctactacttatggtccttaaagagt 48322199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 46711987 - 46711882
Alignment:
Q  68 aaaaagttaaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgtta 167  Q
    ||||||| |||  ||| ||| ||||||||||||||||||  | ||||  ||||||| | |||||||| ||||||||| ||| | || |||||||| ||||    
T  46711987 aaaaagtcaaacattttgatttccaatgcattgattacatgcatttttataaatacttgttatttatggtccttaaaaagtgt-acggagacactcgtta 46711889  T
Q  168 acatttt 174  Q
    |||||||    
T  46711888 acatttt 46711882  T

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Target: chr4 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 35808994 - 35808895
Alignment:
Q  76 aaatgtttcgatatccaatgcattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgttaacattttc 175  Q
    ||||||||| |||| ||||| |||||||||||  |||||  ||||||| || |||| || || |||||||||| ||   ||||||||| |||||||||||    
T  35808994 aaatgtttcaatatgcaatgtattgattacacgttttttcataaatacttactattcatggttcttaaagagtgtccttgagacactttttaacattttc 35808895  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 47560686 - 47560763
Alignment:
Q  96 cattgattacacactttttattaaatacatattatttatagtccttaaagagtttcacagagacacttgttaacattt 173  Q
    |||||||||||| | ||||  | ||||| || ||||||| ||||||||||||| || ||||| |||| ||||||||||    
T  47560686 cattgattacacgcattttcattaatacttactatttatggtccttaaagagtgtctcagaggcactcgttaacattt 47560763  T

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